Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:03:17 (41110): wrapper (7.7.26015): starting
10:03:17 (41110): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 10:03:17] Arguments: --nthreads 4
[2025-10-11 10:03:17] Threads: 4
[2025-10-11 10:03:17] Checking for CVMFS
[2025-10-11 10:03:17] No cvmfs_config command found, will try listing directly
[2025-10-11 10:03:17] CVMFS is ok
[2025-10-11 10:03:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 10:03:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 10:03:17] Further information can be found at the LHC@home message board.
[2025-10-11 10:03:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 10:03:17] Checking for apptainer binary...
[2025-10-11 10:03:17] which: no apptainer in ((null))
[2025-10-11 10:03:17] apptainer is not installed, using version from CVMFS
[2025-10-11 10:03:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 10:03:17] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot88/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-10-11 10:03:17] apptainer works
[2025-10-11 10:03:17] Set ATHENA_PROC_NUMBER=4
[2025-10-11 10:03:17] Set ATHENA_CORE_NUMBER=4
[2025-10-11 10:03:17] Starting ATLAS job with PandaID=6837399568
[2025-10-11 10:03:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot88/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 12:55:54]  *** The last 200 lines of the pilot log: ***
[2025-10-11 12:55:54] 2025-10-11 10:52:18,071 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 12:55:54] 2025-10-11 10:52:18,071 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 12:55:54] 2025-10-11 10:52:18,071 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 12:55:54] 2025-10-11 10:52:18,074 | INFO     | fitting pss+swap vs Time
[2025-10-11 12:55:54] 2025-10-11 10:52:18,074 | INFO     | sum of square deviations: 1418361477.5
[2025-10-11 12:55:54] 2025-10-11 10:52:18,075 | INFO     | sum of deviations: 11177745834.999994
[2025-10-11 12:55:54] 2025-10-11 10:52:18,075 | INFO     | mean x: 1760174878.5
[2025-10-11 12:55:54] 2025-10-11 10:52:18,075 | INFO     | mean y: 2294916.4096385543
[2025-10-11 12:55:54] 2025-10-11 10:52:18,076 | INFO     | -- intersect: -13869195341.28103
[2025-10-11 12:55:54] 2025-10-11 10:52:18,076 | INFO     | intersect: -13869195341.28103
[2025-10-11 12:55:54] 2025-10-11 10:52:18,076 | INFO     | chi2: 1.976484976603834
[2025-10-11 12:55:54] 2025-10-11 10:52:18,076 | INFO     | sum of square deviations: 1294014960.0
[2025-10-11 12:55:54] 2025-10-11 10:52:18,077 | INFO     | sum of deviations: 20712344186.0
[2025-10-11 12:55:54] 2025-10-11 10:52:18,077 | INFO     | mean x: 1760174726.0
[2025-10-11 12:55:54] 2025-10-11 10:52:18,077 | INFO     | mean y: 2306306.962732919
[2025-10-11 12:55:54] 2025-10-11 10:52:18,077 | INFO     | -- intersect: -28171513841.461395
[2025-10-11 12:55:54] 2025-10-11 10:52:18,077 | INFO     | intersect: -28171513841.461395
[2025-10-11 12:55:54] 2025-10-11 10:52:18,078 | INFO     | chi2: 1.2155969827068187
[2025-10-11 12:55:54] 2025-10-11 10:52:18,078 | INFO     | current chi2=1.2155969827068187 (change=38.49702896322735 %)
[2025-10-11 12:55:54] 2025-10-11 10:52:18,078 | INFO     | sum of square deviations: 1177156955.0
[2025-10-11 12:55:54] 2025-10-11 10:52:18,079 | INFO     | sum of deviations: 19966710472.499996
[2025-10-11 12:55:54] 2025-10-11 10:52:18,079 | INFO     | mean x: 1760174573.5
[2025-10-11 12:55:54] 2025-10-11 10:52:18,079 | INFO     | mean y: 2305333.673076923
[2025-10-11 12:55:54] 2025-10-11 10:52:18,079 | INFO     | -- intersect: -29853438151.383823
[2025-10-11 12:55:54] 2025-10-11 10:52:18,079 | INFO     | intersect: -29853438151.383823
[2025-10-11 12:55:54] 2025-10-11 10:52:18,080 | INFO     | chi2: 1.2163811087909393
[2025-10-11 12:55:54] 2025-10-11 10:52:18,080 | INFO     | current chi2=1.2163811087909393 (change=-0.06450543192156914 %)
[2025-10-11 12:55:54] 2025-10-11 10:52:18,080 | INFO     | right removable region: 155
[2025-10-11 12:55:54] 2025-10-11 10:52:18,080 | INFO     | sum of square deviations: 1294014960.0
[2025-10-11 12:55:54] 2025-10-11 10:52:18,081 | INFO     | sum of deviations: -7520338579.000001
[2025-10-11 12:55:54] 2025-10-11 10:52:18,081 | INFO     | mean x: 1760175031.0
[2025-10-11 12:55:54] 2025-10-11 10:52:18,081 | INFO     | mean y: 2317448.9254658385
[2025-10-11 12:55:54] 2025-10-11 10:52:18,081 | INFO     | -- intersect: 10231806752.064451
[2025-10-11 12:55:54] 2025-10-11 10:52:18,081 | INFO     | intersect: 10231806752.064451
[2025-10-11 12:55:54] 2025-10-11 10:52:18,082 | INFO     | chi2: 0.7825384410355342
[2025-10-11 12:55:54] 2025-10-11 10:52:18,082 | INFO     | current chi2=0.7825384410355342 (change=60.407569483267274 %)
[2025-10-11 12:55:54] 2025-10-11 10:52:18,082 | INFO     | sum of square deviations: 1177156955.0
[2025-10-11 12:55:54] 2025-10-11 10:52:18,083 | INFO     | sum of deviations: -6994982697.499999
[2025-10-11 12:55:54] 2025-10-11 10:52:18,083 | INFO     | mean x: 1760175183.5
[2025-10-11 12:55:54] 2025-10-11 10:52:18,083 | INFO     | mean y: 2316764.967948718
[2025-10-11 12:55:54] 2025-10-11 10:52:18,083 | INFO     | -- intersect: 10461750318.713028
[2025-10-11 12:55:54] 2025-10-11 10:52:18,083 | INFO     | intersect: 10461750318.713028
[2025-10-11 12:55:54] 2025-10-11 10:52:18,083 | INFO     | chi2: 0.7827084398249301
[2025-10-11 12:55:54] 2025-10-11 10:52:18,084 | INFO     | current chi2=0.7827084398249301 (change=-0.02172401769438731 %)
[2025-10-11 12:55:54] 2025-10-11 10:52:18,084 | INFO     | left removable region: 20
[2025-10-11 12:55:54] 2025-10-11 10:52:18,084 | INFO     | sum of square deviations: 762879420.0
[2025-10-11 12:55:54] 2025-10-11 10:52:18,085 | INFO     | sum of deviations: 1152983387.0
[2025-10-11 12:55:54] 2025-10-11 10:52:18,085 | INFO     | mean x: 1760175153.0
[2025-10-11 12:55:54] 2025-10-11 10:52:18,085 | INFO     | mean y: 2331247.162962963
[2025-10-11 12:55:54] 2025-10-11 10:52:18,085 | INFO     | -- intersect: -2657922334.7454114
[2025-10-11 12:55:54] 2025-10-11 10:52:18,085 | INFO     | intersect: -2657922334.7454114
[2025-10-11 12:55:54] 2025-10-11 10:52:18,085 | INFO     | chi2: 0.0001823444959933911
[2025-10-11 12:55:54] 2025-10-11 10:52:18,085 | INFO     | -- intersect: -2657922334.7454114
[2025-10-11 12:55:54] 2025-10-11 10:52:18,085 | INFO     | current memory leak: 1.51 B/s (using 135 data points, chi2=0.00)
[2025-10-11 12:55:54] 2025-10-11 10:52:18,086 | INFO     | could have reported an average CPU frequency of 2704 MHz (9 samples)
[2025-10-11 12:55:54] 2025-10-11 10:52:18,086 | INFO     | ..............................
[2025-10-11 12:55:54] 2025-10-11 10:52:18,086 | INFO     | . Timing measurements:
[2025-10-11 12:55:54] 2025-10-11 10:52:18,086 | INFO     | . get job = 0 s
[2025-10-11 12:55:54] 2025-10-11 10:52:18,086 | INFO     | . initial setup = 1 s
[2025-10-11 12:55:54] 2025-10-11 10:52:18,086 | INFO     | . payload setup = 8 s
[2025-10-11 12:55:54] 2025-10-11 10:52:18,086 | INFO     | . stage-in = 0 s
[2025-10-11 12:55:54] 2025-10-11 10:52:18,086 | INFO     | . payload execution = 10085 s
[2025-10-11 12:55:54] 2025-10-11 10:52:18,086 | INFO     | . stage-out = 0 s
[2025-10-11 12:55:54] 2025-10-11 10:52:18,086 | INFO     | . log creation = 0 s
[2025-10-11 12:55:54] 2025-10-11 10:52:18,086 | INFO     | ..............................
[2025-10-11 12:55:54] 2025-10-11 10:52:18,176 | INFO     | 
[2025-10-11 12:55:54] 2025-10-11 10:52:18,176 | INFO     | job summary report
[2025-10-11 12:55:54] 2025-10-11 10:52:18,176 | INFO     | --------------------------------------------------
[2025-10-11 12:55:54] 2025-10-11 10:52:18,176 | INFO     | PanDA job id: 6837399568
[2025-10-11 12:55:54] 2025-10-11 10:52:18,176 | INFO     | task id: 46676269
[2025-10-11 12:55:54] 2025-10-11 10:52:18,176 | INFO     | errors: (none)
[2025-10-11 12:55:54] 2025-10-11 10:52:18,176 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 12:55:54] 2025-10-11 10:52:18,177 | INFO     | pilot state: finished 
[2025-10-11 12:55:54] 2025-10-11 10:52:18,177 | INFO     | transexitcode: 0
[2025-10-11 12:55:54] 2025-10-11 10:52:18,177 | INFO     | exeerrorcode: 0
[2025-10-11 12:55:54] 2025-10-11 10:52:18,177 | INFO     | exeerrordiag: 
[2025-10-11 12:55:54] 2025-10-11 10:52:18,177 | INFO     | exitcode: 0
[2025-10-11 12:55:54] 2025-10-11 10:52:18,177 | INFO     | exitmsg: OK
[2025-10-11 12:55:54] 2025-10-11 10:52:18,177 | INFO     | cpuconsumptiontime: 38500 s
[2025-10-11 12:55:54] 2025-10-11 10:52:18,177 | INFO     | nevents: 400
[2025-10-11 12:55:54] 2025-10-11 10:52:18,177 | INFO     | neventsw: 0
[2025-10-11 12:55:54] 2025-10-11 10:52:18,177 | INFO     | pid: 99250
[2025-10-11 12:55:54] 2025-10-11 10:52:18,177 | INFO     | pgrp: 99250
[2025-10-11 12:55:54] 2025-10-11 10:52:18,177 | INFO     | corecount: 4
[2025-10-11 12:55:54] 2025-10-11 10:52:18,177 | INFO     | event service: False
[2025-10-11 12:55:54] 2025-10-11 10:52:18,177 | INFO     | sizes: {0: 2348868, 7: 2349130, 11: 2349158, 10098: 2378235, 10100: 2387255, 10101: 2387311, 10108: 2387697}
[2025-10-11 12:55:54] 2025-10-11 10:52:18,178 | INFO     | --------------------------------------------------
[2025-10-11 12:55:54] 2025-10-11 10:52:18,178 | INFO     | 
[2025-10-11 12:55:54] 2025-10-11 10:52:18,178 | INFO     | executing command: ls -lF /scratch/boinc/var/slot88/slots/0
[2025-10-11 12:55:54] 2025-10-11 10:52:18,210 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 12:55:54] 2025-10-11 10:52:18,211 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 12:55:54] 2025-10-11 10:52:18,211 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 12:55:54] 2025-10-11 10:52:18,211 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 12:55:54] 2025-10-11 10:52:18,211 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 12:55:54] 2025-10-11 10:52:18,211 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 12:55:54] 2025-10-11 10:52:18,211 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 12:55:54] 2025-10-11 10:52:18,211 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 12:55:54] 2025-10-11 10:52:18,211 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 12:55:54] 2025-10-11 10:52:18,211 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 12:55:54] 2025-10-11 10:52:18,211 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 12:55:54] 2025-10-11 10:52:18,212 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 12:55:54] 2025-10-11 10:52:18,212 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 12:55:54] 2025-10-11 10:52:18,212 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 12:55:54] 2025-10-11 10:52:18,212 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 12:55:54] 2025-10-11 10:52:18,212 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 12:55:54] 2025-10-11 10:52:18,212 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 12:55:54] 2025-10-11 10:52:18,212 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 12:55:54] 2025-10-11 10:52:18,212 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 12:55:54] 2025-10-11 10:52:18,212 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 12:55:54] 2025-10-11 10:52:18,213 | INFO     | job 6837399568 has completed (purged errors)
[2025-10-11 12:55:54] 2025-10-11 10:52:18,213 | INFO     | overall cleanup function is called
[2025-10-11 12:55:54] 2025-10-11 10:52:19,222 | INFO     | --- collectZombieJob: --- 10, [99250]
[2025-10-11 12:55:54] 2025-10-11 10:52:19,222 | INFO     | zombie collector waiting for pid 99250
[2025-10-11 12:55:54] 2025-10-11 10:52:19,222 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 12:55:54] 2025-10-11 10:52:19,222 | INFO     | collected zombie processes
[2025-10-11 12:55:54] 2025-10-11 10:52:19,222 | INFO     | will attempt to kill all subprocesses of pid=99250
[2025-10-11 12:55:54] 2025-10-11 10:52:19,996 | INFO     | process IDs to be killed: [99250] (in reverse order)
[2025-10-11 12:55:54] 2025-10-11 10:52:20,261 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 12:55:54] 2025-10-11 10:52:20,262 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 12:55:54] 2025-10-11 10:52:20,294 | INFO     | did not find any defunct processes belonging to 99250
[2025-10-11 12:55:54] 2025-10-11 10:52:20,324 | INFO     | did not find any defunct processes belonging to 99250
[2025-10-11 12:55:54] 2025-10-11 10:52:20,324 | INFO     | ready for new job
[2025-10-11 12:55:54] 2025-10-11 10:52:20,324 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 12:55:54] 2025-10-11 10:52:20,327 | INFO     | ***************************************
[2025-10-11 12:55:54] 2025-10-11 10:52:20,327 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 12:55:54] 2025-10-11 10:52:20,327 | INFO     | ***************************************
[2025-10-11 12:55:54] 2025-10-11 10:52:20,327 | INFO     | 
[2025-10-11 12:55:54] 2025-10-11 10:52:20,335 | INFO     | architecture information:
[2025-10-11 12:55:54] 2025-10-11 10:52:20,336 | INFO     | executing command: cat /etc/os-release
[2025-10-11 12:55:54] 2025-10-11 10:52:20,361 | INFO     | cat /etc/os-release:
[2025-10-11 12:55:54] NAME="CentOS Linux"
[2025-10-11 12:55:54] VERSION="7 (Core)"
[2025-10-11 12:55:54] ID="centos"
[2025-10-11 12:55:54] ID_LIKE="rhel fedora"
[2025-10-11 12:55:54] VERSION_ID="7"
[2025-10-11 12:55:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 12:55:54] ANSI_COLOR="0;31"
[2025-10-11 12:55:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 12:55:54] HOME_URL="https://www.centos.org/"
[2025-10-11 12:55:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 12:55:54] 
[2025-10-11 12:55:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 12:55:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 12:55:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 12:55:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 12:55:54] 
[2025-10-11 12:55:54] 2025-10-11 10:52:20,365 | INFO     | ***************************************
[2025-10-11 12:55:54] 2025-10-11 10:52:20,869 | INFO     | executing command: df -mP /scratch/boinc/var/slot88/slots/0
[2025-10-11 12:55:54] 2025-10-11 10:52:20,893 | INFO     | sufficient remaining disk space (3342753333248 B)
[2025-10-11 12:55:54] 2025-10-11 10:52:20,893 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 12:55:54] 2025-10-11 10:52:20,894 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 12:55:54] 2025-10-11 10:52:20,894 | INFO     | update_server=False
[2025-10-11 12:55:54] 2025-10-11 10:52:20,894 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 12:55:54] 2025-10-11 10:52:20,894 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 12:55:54] 2025-10-11 10:52:20,894 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 12:55:54] 2025-10-11 10:52:20,895 | INFO     | aborting loop
[2025-10-11 12:55:54] 2025-10-11 10:52:20,896 | INFO     | all data control threads have been joined
[2025-10-11 12:55:54] 2025-10-11 10:52:21,570 | INFO     | all payload control threads have been joined
[2025-10-11 12:55:54] 2025-10-11 10:52:21,596 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 12:55:54] 2025-10-11 10:52:21,896 | INFO     | [job] job monitor thread has finished
[2025-10-11 12:55:54] 2025-10-11 10:52:21,899 | INFO     | [job] retrieve thread has finished
[2025-10-11 12:55:54] 2025-10-11 10:52:21,902 | INFO     | [data] control thread has finished
[2025-10-11 12:55:54] 2025-10-11 10:52:22,237 | INFO     | [payload] failed_post thread has finished
[2025-10-11 12:55:54] 2025-10-11 10:52:22,270 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 12:55:54] 2025-10-11 10:52:22,271 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 12:55:54] 2025-10-11 10:52:22,409 | INFO     | [data] copytool_in thread has finished
[2025-10-11 12:55:54] 2025-10-11 10:52:22,527 | INFO     | all job control threads have been joined
[2025-10-11 12:55:54] 2025-10-11 10:52:22,576 | INFO     | [payload] control thread has finished
[2025-10-11 12:55:54] 2025-10-11 10:52:22,900 | INFO     | [data] copytool_out thread has finished
[2025-10-11 12:55:54] 2025-10-11 10:52:23,169 | INFO     | [job] validate thread has finished
[2025-10-11 12:55:54] 2025-10-11 10:52:23,170 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 12:55:54] 2025-10-11 10:52:23,184 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 12:55:54] 2025-10-11 10:52:23,238 | INFO     | [payload] validate_post thread has finished
[2025-10-11 12:55:54] 2025-10-11 10:52:23,316 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 12:55:54] 2025-10-11 10:52:23,533 | INFO     | [job] control thread has finished
[2025-10-11 12:55:54] 2025-10-11 10:52:24,192 | INFO     | [job] queue monitor thread has finished
[2025-10-11 12:55:54] 2025-10-11 10:52:25,602 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 12:55:54] 2025-10-11 10:52:48,428 | INFO     | [monitor] cgroup control has ended
[2025-10-11 12:55:54] 2025-10-11 10:52:49,433 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23323079395136)>', '<ExcThread(monitor, started 23322842597120)>']
[2025-10-11 12:55:54] 2025-10-11 10:52:51,649 | INFO     | PID=59745 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 12:55:54] 2025-10-11 10:52:51,649 | INFO     | .. there are 11 such processes running
[2025-10-11 12:55:54] 2025-10-11 10:52:51,650 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 12:55:54] 2025-10-11 10:52:51,650 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 12:55:54] 2025-10-11 10:52:51,650 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 12:55:54] 2025-10-11 10:52:51,650 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 12:55:54] 2025-10-11 10:52:51,650 | INFO     | [monitor] control thread has ended
[2025-10-11 12:55:54] 2025-10-11 10:52:54,448 | INFO     | all workflow threads have been joined
[2025-10-11 12:55:54] 2025-10-11 10:52:54,448 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 12:55:54] 2025-10-11 10:52:54,449 | INFO     | traces error code: 0
[2025-10-11 12:55:54] 2025-10-11 10:52:54,449 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 12:55:54] 2025-10-11 10:52:54,591 [wrapper] ==== pilot stdout END ====
[2025-10-11 12:55:54] 2025-10-11 10:52:54,595 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 12:55:54] 2025-10-11 10:52:54,600 [wrapper] pilotpid: 59745
[2025-10-11 12:55:54] 2025-10-11 10:52:54,604 [wrapper] Pilot exit status: 0
[2025-10-11 12:55:54] 2025-10-11 10:52:54,619 [wrapper] pandaids: 6837399568
[2025-10-11 12:55:54] 2025-10-11 10:52:54,794 [wrapper] cleanup supervisor_pilot  627235 59746
[2025-10-11 12:55:54] 2025-10-11 10:52:54,798 [wrapper] Test setup, not cleaning
[2025-10-11 12:55:54] 2025-10-11 10:52:54,803 [wrapper] apfmon messages muted
[2025-10-11 12:55:54] 2025-10-11 10:52:54,807 [wrapper] ==== wrapper stdout END ====
[2025-10-11 12:55:54] 2025-10-11 10:52:54,811 [wrapper] ==== wrapper stderr END ====
[2025-10-11 12:55:54]  *** Error codes and diagnostics ***
[2025-10-11 12:55:54]     "exeErrorCode": 0,
[2025-10-11 12:55:54]     "exeErrorDiag": "",
[2025-10-11 12:55:54]     "pilotErrorCode": 0,
[2025-10-11 12:55:54]     "pilotErrorDiag": "",
[2025-10-11 12:55:54]  *** Listing of results directory ***
[2025-10-11 12:55:54] total 417060
[2025-10-11 12:55:54] -rw-r--r-- 1 boinc boinc    557409 Oct 10 05:28 pilot3.tar.gz
[2025-10-11 12:55:54] -rwx------ 1 boinc boinc     36292 Oct 10 05:35 runpilot2-wrapper.sh
[2025-10-11 12:55:54] -rw-r--r-- 1 boinc boinc      5112 Oct 10 05:35 queuedata.json
[2025-10-11 12:55:54] -rw-r--r-- 1 boinc boinc       100 Oct 11 10:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 12:55:54] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 10:03 run_atlas
[2025-10-11 12:55:54] -rw-r--r-- 1 boinc boinc       105 Oct 11 10:03 job.xml
[2025-10-11 12:55:54] -rw-r--r-- 1 boinc boinc      6686 Oct 11 10:03 init_data.xml
[2025-10-11 12:55:54] -rw-r--r-- 2 boinc boinc 220838098 Oct 11 10:03 EVNT.46676267._001285.pool.root.1
[2025-10-11 12:55:54] -rw-r--r-- 2 boinc boinc     15120 Oct 11 10:03 start_atlas.sh
[2025-10-11 12:55:54] drwxrwx--x 2 boinc boinc      4096 Oct 11 10:03 shared
[2025-10-11 12:55:54] -rw-r--r-- 2 boinc boinc    569674 Oct 11 10:03 input.tar.gz
[2025-10-11 12:55:54] -rw-r--r-- 1 boinc boinc         0 Oct 11 10:03 boinc_lockfile
[2025-10-11 12:55:54] -rw-r--r-- 1 boinc boinc      2550 Oct 11 10:03 pandaJob.out
[2025-10-11 12:55:54] -rw------- 1 boinc boinc    975525 Oct 11 10:03 agis_schedconf.cvmfs.json
[2025-10-11 12:55:54] -rw------- 1 boinc boinc   1560580 Oct 11 10:03 agis_ddmendpoints.agis.ALL.json
[2025-10-11 12:55:54] drwx------ 5 boinc boinc      4096 Oct 11 10:03 pilot3
[2025-10-11 12:55:54] -rw------- 1 boinc boinc 198817555 Oct 11 12:51 HITS.46676269._031534.pool.root.1
[2025-10-11 12:55:54] -rw-r--r-- 1 boinc boinc       528 Oct 11 12:51 boinc_task_state.xml
[2025-10-11 12:55:54] -rw------- 1 boinc boinc      1025 Oct 11 12:52 memory_monitor_summary.json
[2025-10-11 12:55:54] -rw------- 1 boinc boinc    348083 Oct 11 12:52 log.46676269._031534.job.log.tgz.1
[2025-10-11 12:55:54] -rw------- 1 boinc boinc        95 Oct 11 12:52 pilot_heartbeat.json
[2025-10-11 12:55:54] -rw------- 1 boinc boinc      7784 Oct 11 12:52 heartbeat.json
[2025-10-11 12:55:54] -rw------- 1 boinc boinc      4833 Oct 11 12:52 pilotlog.txt
[2025-10-11 12:55:54] -rw------- 1 boinc boinc   1405430 Oct 11 12:52 log.46676269._031534.job.log.1
[2025-10-11 12:55:54] -rw------- 1 boinc boinc       357 Oct 11 12:52 output.list
[2025-10-11 12:55:54] -rw-r--r-- 1 boinc boinc       620 Oct 11 12:52 runtime_log
[2025-10-11 12:55:54] -rw------- 1 boinc boinc   1771520 Oct 11 12:52 result.tar.gz
[2025-10-11 12:55:54] -rw-r--r-- 1 boinc boinc      9070 Oct 11 12:52 runtime_log.err
[2025-10-11 12:55:54] -rw------- 1 boinc boinc       665 Oct 11 12:52 ODmKDmz5IR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqBcNDmVBWRmn.diag
[2025-10-11 12:55:54] -rw-r--r-- 1 boinc boinc        26 Oct 11 12:55 wrapper_checkpoint.txt
[2025-10-11 12:55:54] -rw-r--r-- 1 boinc boinc      8192 Oct 11 12:55 boinc_mmap_file
[2025-10-11 12:55:54] -rw-r--r-- 1 boinc boinc     20656 Oct 11 12:55 stderr.txt
[2025-10-11 12:55:54] HITS file was successfully produced:
[2025-10-11 12:55:54] -rw------- 1 boinc boinc 198817555 Oct 11 12:51 shared/HITS.pool.root.1
[2025-10-11 12:55:54]  *** Contents of shared directory: ***
[2025-10-11 12:55:54] total 412140
[2025-10-11 12:55:54] -rw-r--r-- 2 boinc boinc 220838098 Oct 11 10:03 ATLAS.root_0
[2025-10-11 12:55:54] -rw-r--r-- 2 boinc boinc     15120 Oct 11 10:03 start_atlas.sh
[2025-10-11 12:55:54] -rw-r--r-- 2 boinc boinc    569674 Oct 11 10:03 input.tar.gz
[2025-10-11 12:55:54] -rw------- 1 boinc boinc 198817555 Oct 11 12:51 HITS.pool.root.1
[2025-10-11 12:55:54] -rw------- 1 boinc boinc   1771520 Oct 11 12:52 result.tar.gz
12:55:55 (41110): run_atlas exited; CPU time 39170.583238
12:55:55 (41110): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN