Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:54:02 (1107332): wrapper (7.7.26015): starting
10:54:02 (1107332): wrapper: running run_atlas (--nthreads 2)
[2025-10-10 10:54:02] Arguments: --nthreads 2
[2025-10-10 10:54:02] Threads: 2
[2025-10-10 10:54:02] Checking for CVMFS
[2025-10-10 10:54:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 10:54:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 10:54:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 10:54:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 10:54:02] 2.9.2.0 823835 1237 55176 151539 1 57 2352280 36864000 0 130560 0 745899 99.989 35971 873 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-10 10:54:02] CVMFS is ok
[2025-10-10 10:54:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 10:54:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 10:54:02] Further information can be found at the LHC@home message board.
[2025-10-10 10:54:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 10:54:02] Checking for apptainer binary...
[2025-10-10 10:54:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 10:54:02] Running /usr/bin/apptainer --version
[2025-10-10 10:54:02] apptainer version 1.4.1-1.1
[2025-10-10 10:54:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 10:54:02] atlasA228a
[2025-10-10 10:54:02] apptainer works
[2025-10-10 10:54:02] Set ATHENA_PROC_NUMBER=2
[2025-10-10 10:54:02] Set ATHENA_CORE_NUMBER=2
[2025-10-10 10:54:02] Starting ATLAS job with PandaID=6837398844
[2025-10-10 10:54:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 13:00:31]  *** The last 200 lines of the pilot log: ***
[2025-10-10 13:00:31] 2025-10-10 10:59:32,742 | INFO     | cat /etc/os-release:
[2025-10-10 13:00:31] NAME="CentOS Linux"
[2025-10-10 13:00:31] VERSION="7 (Core)"
[2025-10-10 13:00:31] ID="centos"
[2025-10-10 13:00:31] ID_LIKE="rhel fedora"
[2025-10-10 13:00:31] VERSION_ID="7"
[2025-10-10 13:00:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 13:00:31] ANSI_COLOR="0;31"
[2025-10-10 13:00:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 13:00:31] HOME_URL="https://www.centos.org/"
[2025-10-10 13:00:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 13:00:31] 
[2025-10-10 13:00:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 13:00:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 13:00:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 13:00:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 13:00:31] 
[2025-10-10 13:00:31] 2025-10-10 10:59:32,742 | INFO     | ***************************************
[2025-10-10 13:00:31] 2025-10-10 10:59:33,246 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-10 13:00:31] 2025-10-10 10:59:33,258 | INFO     | sufficient remaining disk space (209208737792 B)
[2025-10-10 13:00:31] 2025-10-10 10:59:33,258 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 13:00:31] 2025-10-10 10:59:33,258 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 13:00:31] 2025-10-10 10:59:33,258 | INFO     | update_server=False
[2025-10-10 13:00:31] 2025-10-10 10:59:33,258 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 13:00:31] 2025-10-10 10:59:33,258 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 13:00:31] 2025-10-10 10:59:33,258 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 13:00:31] 2025-10-10 10:59:33,661 | INFO     | all job control threads have been joined
[2025-10-10 13:00:31] 2025-10-10 10:59:33,865 | INFO     | all data control threads have been joined
[2025-10-10 13:00:31] 2025-10-10 10:59:33,870 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 13:00:31] 2025-10-10 10:59:33,870 | INFO     | aborting loop
[2025-10-10 13:00:31] 2025-10-10 10:59:34,264 | INFO     | [job] queue monitor thread has finished
[2025-10-10 13:00:31] 2025-10-10 10:59:34,265 | INFO     | [job] retrieve thread has finished
[2025-10-10 13:00:31] 2025-10-10 10:59:34,292 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 13:00:31] 2025-10-10 10:59:34,353 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 13:00:31] 2025-10-10 10:59:34,594 | INFO     | all payload control threads have been joined
[2025-10-10 13:00:31] 2025-10-10 10:59:34,650 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 13:00:31] 2025-10-10 10:59:34,663 | INFO     | [job] control thread has finished
[2025-10-10 13:00:31] 2025-10-10 10:59:34,871 | INFO     | [data] control thread has finished
[2025-10-10 13:00:31] 2025-10-10 10:59:34,875 | INFO     | [job] job monitor thread has finished
[2025-10-10 13:00:31] 2025-10-10 10:59:34,957 | INFO     | [payload] failed_post thread has finished
[2025-10-10 13:00:31] 2025-10-10 10:59:35,264 | INFO     | [data] copytool_out thread has finished
[2025-10-10 13:00:31] 2025-10-10 10:59:35,288 | INFO     | [data] copytool_in thread has finished
[2025-10-10 13:00:31] 2025-10-10 10:59:35,515 | INFO     | [payload] validate_post thread has finished
[2025-10-10 13:00:31] 2025-10-10 10:59:35,528 | INFO     | [job] validate thread has finished
[2025-10-10 13:00:31] 2025-10-10 10:59:35,600 | INFO     | [payload] control thread has finished
[2025-10-10 13:00:31] 2025-10-10 10:59:35,701 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 13:00:31] 2025-10-10 10:59:38,657 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 13:00:31] 2025-10-10 10:59:44,025 | INFO     | job.realtimelogging is not enabled
[2025-10-10 13:00:31] 2025-10-10 10:59:45,031 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 13:00:31] 2025-10-10 11:00:04,034 | INFO     | PID=1111037 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 13:00:31] 2025-10-10 11:00:04,034 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 13:00:31] 2025-10-10 11:00:04,034 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 13:00:31] 2025-10-10 11:00:04,034 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 13:00:31] 2025-10-10 11:00:26,022 | INFO     | [monitor] cgroup control has ended
[2025-10-10 13:00:31] 2025-10-10 11:00:26,268 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140531720927040)>', '<ExcThread(monitor, started 140530709157632)>']
[2025-10-10 13:00:31] 2025-10-10 11:00:27,151 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 13:00:31] 2025-10-10 11:00:27,151 | INFO     | [monitor] control thread has ended
[2025-10-10 13:00:31] 2025-10-10 11:00:31,294 | INFO     | all workflow threads have been joined
[2025-10-10 13:00:31] 2025-10-10 11:00:31,294 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 13:00:31] 2025-10-10 11:00:31,295 | INFO     | traces error code: 0
[2025-10-10 13:00:31] 2025-10-10 11:00:31,295 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 13:00:31] 2025-10-10 11:00:31,338 [wrapper] ==== pilot stdout END ====
[2025-10-10 13:00:31] 2025-10-10 11:00:31,341 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 13:00:31] 2025-10-10 11:00:31,343 [wrapper] pilotpid: 1111037
[2025-10-10 13:00:31] 2025-10-10 11:00:31,345 [wrapper] Pilot exit status: 0
[2025-10-10 13:00:31] 2025-10-10 11:00:31,352 [wrapper] pandaids: 6837398844
[2025-10-10 13:00:31] 2025-10-10 11:00:31,367 [wrapper] cleanup supervisor_pilot 1132194 1111038
[2025-10-10 13:00:31] 2025-10-10 11:00:31,369 [wrapper] Test setup, not cleaning
[2025-10-10 13:00:31] 2025-10-10 11:00:31,371 [wrapper] apfmon messages muted
[2025-10-10 13:00:31] 2025-10-10 11:00:31,374 [wrapper] ==== wrapper stdout END ====
[2025-10-10 13:00:31] 2025-10-10 11:00:31,376 [wrapper] ==== wrapper stderr END ====
[2025-10-10 13:00:31]  *** Error codes and diagnostics ***
[2025-10-10 13:00:31]     "exeErrorCode": 0,
[2025-10-10 13:00:31]     "exeErrorDiag": "",
[2025-10-10 13:00:31]     "pilotErrorCode": 0,
[2025-10-10 13:00:31]     "pilotErrorDiag": "",
[2025-10-10 13:00:31]  *** Listing of results directory ***
[2025-10-10 13:00:31] total 416652
[2025-10-10 13:00:31] -rw-r--r-- 1 boinc boinc    557409 Oct 10 05:12 pilot3.tar.gz
[2025-10-10 13:00:31] -rwx------ 1 boinc boinc     36292 Oct 10 05:18 runpilot2-wrapper.sh
[2025-10-10 13:00:31] -rw-r--r-- 1 boinc boinc      5112 Oct 10 05:18 queuedata.json
[2025-10-10 13:00:31] -rw-r--r-- 1 boinc boinc       100 Oct 10 10:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 13:00:31] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 10:54 run_atlas
[2025-10-10 13:00:31] -rw-r--r-- 1 boinc boinc       105 Oct 10 10:54 job.xml
[2025-10-10 13:00:31] -rw-r--r-- 2 boinc boinc 222129781 Oct 10 10:54 EVNT.46676267._001274.pool.root.1
[2025-10-10 13:00:31] -rw-r--r-- 2 boinc boinc    569676 Oct 10 10:54 input.tar.gz
[2025-10-10 13:00:31] -rw-r--r-- 2 boinc boinc     15120 Oct 10 10:54 start_atlas.sh
[2025-10-10 13:00:31] drwxrwx--x 2 boinc boinc      4096 Oct 10 10:54 shared
[2025-10-10 13:00:31] -rw-r--r-- 1 boinc boinc         0 Oct 10 10:54 boinc_setup_complete
[2025-10-10 13:00:31] -rw-r--r-- 1 boinc boinc      6206 Oct 10 10:54 init_data.xml
[2025-10-10 13:00:31] -rw-r--r-- 1 boinc boinc         0 Oct 10 10:54 boinc_lockfile
[2025-10-10 13:00:31] -rw-r--r-- 1 boinc boinc      2550 Oct 10 10:54 pandaJob.out
[2025-10-10 13:00:31] -rw------- 1 boinc boinc    975462 Oct 10 10:54 agis_schedconf.cvmfs.json
[2025-10-10 13:00:31] -rw------- 1 boinc boinc   1560580 Oct 10 10:54 agis_ddmendpoints.agis.ALL.json
[2025-10-10 13:00:31] drwx------ 5 boinc boinc      4096 Oct 10 10:54 pilot3
[2025-10-10 13:00:31] -rw------- 1 boinc boinc 197889368 Oct 10 12:59 HITS.46676269._031255.pool.root.1
[2025-10-10 13:00:31] -rw-r--r-- 1 boinc boinc       529 Oct 10 12:59 boinc_task_state.xml
[2025-10-10 13:00:31] -rw------- 1 boinc boinc      1012 Oct 10 12:59 memory_monitor_summary.json
[2025-10-10 13:00:31] -rw------- 1 boinc boinc    277680 Oct 10 12:59 log.46676269._031255.job.log.tgz.1
[2025-10-10 13:00:31] -rw------- 1 boinc boinc      7752 Oct 10 12:59 heartbeat.json
[2025-10-10 13:00:31] -rw------- 1 boinc boinc        95 Oct 10 13:00 pilot_heartbeat.json
[2025-10-10 13:00:31] -rw-r--r-- 1 boinc boinc        27 Oct 10 13:00 wrapper_checkpoint.txt
[2025-10-10 13:00:31] -rw-r--r-- 1 boinc boinc      8192 Oct 10 13:00 boinc_mmap_file
[2025-10-10 13:00:31] -rw------- 1 boinc boinc      4824 Oct 10 13:00 pilotlog.txt
[2025-10-10 13:00:31] -rw------- 1 boinc boinc   1090772 Oct 10 13:00 log.46676269._031255.job.log.1
[2025-10-10 13:00:31] -rw------- 1 boinc boinc       357 Oct 10 13:00 output.list
[2025-10-10 13:00:31] -rw-r--r-- 1 boinc boinc       620 Oct 10 13:00 runtime_log
[2025-10-10 13:00:31] -rw------- 1 boinc boinc   1392640 Oct 10 13:00 result.tar.gz
[2025-10-10 13:00:31] -rw-r--r-- 1 boinc boinc      8797 Oct 10 13:00 runtime_log.err
[2025-10-10 13:00:31] -rw------- 1 boinc boinc       663 Oct 10 13:00 aWyLDm1oIR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmE9bNDms3Z7Nn.diag
[2025-10-10 13:00:31] -rw-r--r-- 1 boinc boinc      8880 Oct 10 13:00 stderr.txt
[2025-10-10 13:00:31] HITS file was successfully produced:
[2025-10-10 13:00:31] -rw------- 1 boinc boinc 197889368 Oct 10 12:59 shared/HITS.pool.root.1
[2025-10-10 13:00:31]  *** Contents of shared directory: ***
[2025-10-10 13:00:31] total 412120
[2025-10-10 13:00:31] -rw-r--r-- 2 boinc boinc 222129781 Oct 10 10:54 ATLAS.root_0
[2025-10-10 13:00:31] -rw-r--r-- 2 boinc boinc    569676 Oct 10 10:54 input.tar.gz
[2025-10-10 13:00:31] -rw-r--r-- 2 boinc boinc     15120 Oct 10 10:54 start_atlas.sh
[2025-10-10 13:00:31] -rw------- 1 boinc boinc 197889368 Oct 10 12:59 HITS.pool.root.1
[2025-10-10 13:00:31] -rw------- 1 boinc boinc   1392640 Oct 10 13:00 result.tar.gz
13:00:32 (1107332): run_atlas exited; CPU time 14577.106616
13:00:32 (1107332): called boinc_finish(0)

</stderr_txt>
]]>

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