Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:27:04 (19311): wrapper (7.7.26015): starting
02:27:04 (19311): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 02:27:04] Arguments: --nthreads 12
[2025-10-11 02:27:04] Threads: 12
[2025-10-11 02:27:04] Checking for CVMFS
[2025-10-11 02:27:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 02:27:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 02:27:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 02:27:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 02:27:04] 2.13.1.0 2980946 2199 66536 151566 0 56 2436246 4097024 0 130560 0 3482395 99.995 72257 7054 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-11 02:27:04] CVMFS is ok
[2025-10-11 02:27:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 02:27:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 02:27:04] Further information can be found at the LHC@home message board.
[2025-10-11 02:27:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 02:27:04] Checking for apptainer binary...
[2025-10-11 02:27:04] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-11 02:27:04] apptainer is not installed, using version from CVMFS
[2025-10-11 02:27:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 02:27:04] pckelar2.cern.ch
[2025-10-11 02:27:04] apptainer works
[2025-10-11 02:27:04] Set ATHENA_PROC_NUMBER=12
[2025-10-11 02:27:04] Set ATHENA_CORE_NUMBER=12
[2025-10-11 02:27:04] Starting ATLAS job with PandaID=6837331546
[2025-10-11 02:27:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 03:16:28]  *** The last 200 lines of the pilot log: ***
[2025-10-11 03:16:28]  scope=mc23_13p6TeV
[2025-10-11 03:16:28]  status=None
[2025-10-11 03:16:28]  status_code=0
[2025-10-11 03:16:28]  storage_token=
[2025-10-11 03:16:28]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6837331546/log.46676269._014862.job.log.tgz.1
[2025-10-11 03:16:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e1/53/log.46676269._014862.job.log.tgz.1
[2025-10-11 03:16:28]  workdir=None
[2025-10-11 03:16:28] ]
[2025-10-11 03:16:28] 2025-10-11 01:15:46,358 | INFO     | transferring file log.46676269._014862.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6837331546/log.46676269._014862.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-11 03:16:28] 2025-10-11 01:15:46,359 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6837331546/log.46676269._014862.job.log.tgz.1 /var/lib/boinc/slots/0/log.46676269._014862.job
[2025-10-11 03:16:28] 2025-10-11 01:15:46,372 | INFO     | adding to output.list: log.46676269._014862.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e1/53/log.46676269._014862.job.log.tg
[2025-10-11 03:16:28] 2025-10-11 01:15:46,373 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 03:16:28] 2025-10-11 01:15:46,373 | INFO     | summary of transferred files:
[2025-10-11 03:16:28] 2025-10-11 01:15:46,373 | INFO     |  -- lfn=log.46676269._014862.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 03:16:28] 2025-10-11 01:15:46,373 | INFO     | stage-out finished correctly
[2025-10-11 03:16:28] 2025-10-11 01:15:46,668 | INFO     | time since job start (2914s) is within the limit (172800.0s)
[2025-10-11 03:16:28] 2025-10-11 01:15:47,491 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 03:16:28] 2025-10-11 01:15:48,674 | INFO     | time since job start (2916s) is within the limit (172800.0s)
[2025-10-11 03:16:28] 2025-10-11 01:15:48,681 | INFO     | monitor loop #226: job 0:6837331546 is in state 'finished'
[2025-10-11 03:16:28] 2025-10-11 01:15:48,681 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 03:16:28] 2025-10-11 01:15:50,175 | INFO     | job 6837331546 has state=finished
[2025-10-11 03:16:28] 2025-10-11 01:15:50,176 | INFO     | preparing for final server update for job 6837331546 in state='finished'
[2025-10-11 03:16:28] 2025-10-11 01:15:50,176 | INFO     | this job has now completed (state=finished)
[2025-10-11 03:16:28] 2025-10-11 01:15:50,176 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 03:16:28] 2025-10-11 01:15:50,176 | INFO     | log transfer has been attempted: DONE
[2025-10-11 03:16:28] 2025-10-11 01:15:50,176 | INFO     | job 6837331546 has finished - writing final server update
[2025-10-11 03:16:28] 2025-10-11 01:15:50,177 | INFO     | total number of processed events: 400 (read)
[2025-10-11 03:16:28] 2025-10-11 01:15:50,179 | INFO     | executing command: lscpu
[2025-10-11 03:16:28] 2025-10-11 01:15:50,202 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 03:16:28] 2025-10-11 01:15:50,680 | INFO     | time since job start (2918s) is within the limit (172800.0s)
[2025-10-11 03:16:28] 2025-10-11 01:15:51,184 | INFO     | monitor loop #227: job 0:6837331546 is in state 'finished'
[2025-10-11 03:16:28] 2025-10-11 01:15:51,185 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 03:16:28] 2025-10-11 01:15:52,685 | INFO     | time since job start (2920s) is within the limit (172800.0s)
[2025-10-11 03:16:28] 2025-10-11 01:15:53,687 | INFO     | monitor loop #228: job 0:6837331546 is in state 'finished'
[2025-10-11 03:16:28] 2025-10-11 01:15:53,687 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 03:16:28] 2025-10-11 01:15:54,690 | INFO     | time since job start (2922s) is within the limit (172800.0s)
[2025-10-11 03:16:28] 2025-10-11 01:15:55,496 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 03:16:28] 2025-10-11 01:15:55,499 | INFO     | found 20 cores (10 cores per socket, 2 sockets) , CPU MHz: 2533.0143000000003
[2025-10-11 03:16:28] 2025-10-11 01:15:55,501 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6837331546/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 03:16:28] 2025-10-11 01:15:55,502 | INFO     | extracted standard info from prmon json
[2025-10-11 03:16:28] 2025-10-11 01:15:55,502 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 03:16:28] 2025-10-11 01:15:55,502 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 03:16:28] 2025-10-11 01:15:55,503 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 03:16:28] 2025-10-11 01:15:55,503 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 03:16:28] 2025-10-11 01:15:55,504 | INFO     | fitting pss+swap vs Time
[2025-10-11 03:16:28] 2025-10-11 01:15:55,504 | INFO     | sum of square deviations: 21358540.0
[2025-10-11 03:16:28] 2025-10-11 01:15:55,504 | INFO     | sum of deviations: 388247553.9999999
[2025-10-11 03:16:28] 2025-10-11 01:15:55,504 | INFO     | mean x: 1760143981.0
[2025-10-11 03:16:28] 2025-10-11 01:15:55,504 | INFO     | mean y: 3170044.6341463416
[2025-10-11 03:16:28] 2025-10-11 01:15:55,504 | INFO     | -- intersect: -31992069110.807762
[2025-10-11 03:16:28] 2025-10-11 01:15:55,504 | INFO     | intersect: -31992069110.807762
[2025-10-11 03:16:28] 2025-10-11 01:15:55,504 | INFO     | chi2: 0.0003867706473684927
[2025-10-11 03:16:28] 2025-10-11 01:15:55,504 | INFO     | -- intersect: -31992069110.807762
[2025-10-11 03:16:28] 2025-10-11 01:15:55,505 | INFO     | current memory leak: 18.18 B/s (using 41 data points, chi2=0.00)
[2025-10-11 03:16:28] 2025-10-11 01:15:55,505 | INFO     | could have reported an average CPU frequency of 2498 MHz (5 samples)
[2025-10-11 03:16:28] 2025-10-11 01:15:55,505 | INFO     | ..............................
[2025-10-11 03:16:28] 2025-10-11 01:15:55,505 | INFO     | . Timing measurements:
[2025-10-11 03:16:28] 2025-10-11 01:15:55,505 | INFO     | . get job = 0 s
[2025-10-11 03:16:28] 2025-10-11 01:15:55,505 | INFO     | . initial setup = 1 s
[2025-10-11 03:16:28] 2025-10-11 01:15:55,505 | INFO     | . payload setup = 6 s
[2025-10-11 03:16:28] 2025-10-11 01:15:55,505 | INFO     | . stage-in = 0 s
[2025-10-11 03:16:28] 2025-10-11 01:15:55,505 | INFO     | . payload execution = 2888 s
[2025-10-11 03:16:28] 2025-10-11 01:15:55,505 | INFO     | . stage-out = 0 s
[2025-10-11 03:16:28] 2025-10-11 01:15:55,505 | INFO     | . log creation = 0 s
[2025-10-11 03:16:28] 2025-10-11 01:15:55,505 | INFO     | ..............................
[2025-10-11 03:16:28] 2025-10-11 01:15:55,565 | INFO     | 
[2025-10-11 03:16:28] 2025-10-11 01:15:55,566 | INFO     | job summary report
[2025-10-11 03:16:28] 2025-10-11 01:15:55,566 | INFO     | --------------------------------------------------
[2025-10-11 03:16:28] 2025-10-11 01:15:55,566 | INFO     | PanDA job id: 6837331546
[2025-10-11 03:16:28] 2025-10-11 01:15:55,566 | INFO     | task id: 46676269
[2025-10-11 03:16:28] 2025-10-11 01:15:55,566 | INFO     | errors: (none)
[2025-10-11 03:16:28] 2025-10-11 01:15:55,566 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 03:16:28] 2025-10-11 01:15:55,566 | INFO     | pilot state: finished 
[2025-10-11 03:16:28] 2025-10-11 01:15:55,566 | INFO     | transexitcode: 0
[2025-10-11 03:16:28] 2025-10-11 01:15:55,566 | INFO     | exeerrorcode: 0
[2025-10-11 03:16:28] 2025-10-11 01:15:55,566 | INFO     | exeerrordiag: 
[2025-10-11 03:16:28] 2025-10-11 01:15:55,566 | INFO     | exitcode: 0
[2025-10-11 03:16:28] 2025-10-11 01:15:55,566 | INFO     | exitmsg: OK
[2025-10-11 03:16:28] 2025-10-11 01:15:55,566 | INFO     | cpuconsumptiontime: 30498 s
[2025-10-11 03:16:28] 2025-10-11 01:15:55,566 | INFO     | nevents: 400
[2025-10-11 03:16:28] 2025-10-11 01:15:55,566 | INFO     | neventsw: 0
[2025-10-11 03:16:28] 2025-10-11 01:15:55,566 | INFO     | pid: 30540
[2025-10-11 03:16:28] 2025-10-11 01:15:55,566 | INFO     | pgrp: 30540
[2025-10-11 03:16:28] 2025-10-11 01:15:55,566 | INFO     | corecount: 12
[2025-10-11 03:16:28] 2025-10-11 01:15:55,566 | INFO     | event service: False
[2025-10-11 03:16:28] 2025-10-11 01:15:55,567 | INFO     | sizes: {0: 2348856, 4: 2349118, 11: 2349146, 2898: 2374545, 2899: 2374544, 2900: 2383598, 2901: 2383782, 2909: 2384008}
[2025-10-11 03:16:28] 2025-10-11 01:15:55,567 | INFO     | --------------------------------------------------
[2025-10-11 03:16:28] 2025-10-11 01:15:55,567 | INFO     | 
[2025-10-11 03:16:28] 2025-10-11 01:15:55,567 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-11 03:16:28] 2025-10-11 01:15:55,581 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 03:16:28] 2025-10-11 01:15:55,582 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 03:16:28] 2025-10-11 01:15:55,582 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 03:16:28] 2025-10-11 01:15:55,582 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 03:16:28] 2025-10-11 01:15:55,582 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 03:16:28] 2025-10-11 01:15:55,582 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 03:16:28] 2025-10-11 01:15:55,582 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 03:16:28] 2025-10-11 01:15:55,582 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 03:16:28] 2025-10-11 01:15:55,582 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 03:16:28] 2025-10-11 01:15:55,582 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 03:16:28] 2025-10-11 01:15:55,582 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 03:16:28] 2025-10-11 01:15:55,582 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 03:16:28] 2025-10-11 01:15:55,582 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 03:16:28] 2025-10-11 01:15:55,583 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 03:16:28] 2025-10-11 01:15:55,583 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 03:16:28] 2025-10-11 01:15:55,583 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 03:16:28] 2025-10-11 01:15:55,583 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 03:16:28] 2025-10-11 01:15:55,583 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 03:16:28] 2025-10-11 01:15:55,583 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 03:16:28] 2025-10-11 01:15:55,583 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 03:16:28] 2025-10-11 01:15:55,583 | INFO     | job 6837331546 has completed (purged errors)
[2025-10-11 03:16:28] 2025-10-11 01:15:55,583 | INFO     | overall cleanup function is called
[2025-10-11 03:16:28] 2025-10-11 01:15:56,589 | INFO     | --- collectZombieJob: --- 10, [30540]
[2025-10-11 03:16:28] 2025-10-11 01:15:56,589 | INFO     | zombie collector waiting for pid 30540
[2025-10-11 03:16:28] 2025-10-11 01:15:56,589 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 03:16:28] 2025-10-11 01:15:56,589 | INFO     | collected zombie processes
[2025-10-11 03:16:28] 2025-10-11 01:15:56,590 | INFO     | will attempt to kill all subprocesses of pid=30540
[2025-10-11 03:16:28] 2025-10-11 01:15:56,664 | INFO     | process IDs to be killed: [30540] (in reverse order)
[2025-10-11 03:16:28] 2025-10-11 01:15:56,702 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 03:16:28] 2025-10-11 01:15:56,702 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 03:16:28] 2025-10-11 01:15:56,704 | INFO     | did not find any defunct processes belonging to 30540
[2025-10-11 03:16:28] 2025-10-11 01:15:56,706 | INFO     | did not find any defunct processes belonging to 30540
[2025-10-11 03:16:28] 2025-10-11 01:15:56,706 | INFO     | ready for new job
[2025-10-11 03:16:28] 2025-10-11 01:15:56,706 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 03:16:28] 2025-10-11 01:15:56,707 | INFO     | ***************************************
[2025-10-11 03:16:28] 2025-10-11 01:15:56,707 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 03:16:28] 2025-10-11 01:15:56,708 | INFO     | ***************************************
[2025-10-11 03:16:28] 2025-10-11 01:15:56,708 | INFO     | 
[2025-10-11 03:16:28] 2025-10-11 01:15:56,708 | INFO     | architecture information:
[2025-10-11 03:16:28] 2025-10-11 01:15:56,709 | INFO     | executing command: cat /etc/os-release
[2025-10-11 03:16:28] 2025-10-11 01:15:56,718 | INFO     | cat /etc/os-release:
[2025-10-11 03:16:28] NAME="CentOS Linux"
[2025-10-11 03:16:28] VERSION="7 (Core)"
[2025-10-11 03:16:28] ID="centos"
[2025-10-11 03:16:28] ID_LIKE="rhel fedora"
[2025-10-11 03:16:28] VERSION_ID="7"
[2025-10-11 03:16:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 03:16:28] ANSI_COLOR="0;31"
[2025-10-11 03:16:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 03:16:28] HOME_URL="https://www.centos.org/"
[2025-10-11 03:16:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 03:16:28] 
[2025-10-11 03:16:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 03:16:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 03:16:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 03:16:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 03:16:28] 
[2025-10-11 03:16:28] 2025-10-11 01:15:56,718 | INFO     | ***************************************
[2025-10-11 03:16:28] 2025-10-11 01:15:57,221 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-11 03:16:28] 2025-10-11 01:15:57,236 | INFO     | sufficient remaining disk space (231612612608 B)
[2025-10-11 03:16:28] 2025-10-11 01:15:57,237 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 03:16:28] 2025-10-11 01:15:57,237 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 03:16:28] 2025-10-11 01:15:57,237 | INFO     | update_server=False
[2025-10-11 03:16:28] 2025-10-11 01:15:57,237 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 03:16:28] 2025-10-11 01:15:57,237 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 03:16:28] 2025-10-11 01:15:57,237 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 03:16:28] 2025-10-11 01:15:57,237 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 03:16:28] 2025-10-11 01:15:57,238 | INFO     | aborting loop
[2025-10-11 03:16:28] 2025-10-11 01:15:57,633 | INFO     | all data control threads have been joined
[2025-10-11 03:16:28] 2025-10-11 01:15:57,768 | INFO     | all job control threads have been joined
[2025-10-11 03:16:28] 2025-10-11 01:15:57,877 | INFO     | all payload control threads have been joined
[2025-10-11 03:16:28] 2025-10-11 01:15:58,062 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 03:16:28] 2025-10-11 01:15:58,241 | INFO     | [job] retrieve thread has finished
[2025-10-11 03:16:28] 2025-10-11 01:15:58,242 | INFO     | [job] queue monitor thread has finished
[2025-10-11 03:16:28] 2025-10-11 01:15:58,242 | INFO     | [job] job monitor thread has finished
[2025-10-11 03:16:28] 2025-10-11 01:15:58,245 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 03:16:28] 2025-10-11 01:15:58,313 | INFO     | [payload] failed_post thread has finished
[2025-10-11 03:16:28] 2025-10-11 01:15:58,363 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 03:16:28] 2025-10-11 01:15:58,638 | INFO     | [data] control thread has finished
[2025-10-11 03:16:28] 2025-10-11 01:15:58,774 | INFO     | [job] control thread has finished
[2025-10-11 03:16:28] 2025-10-11 01:15:58,823 | INFO     | [payload] validate_post thread has finished
[2025-10-11 03:16:28] 2025-10-11 01:15:58,881 | INFO     | [payload] control thread has finished
[2025-10-11 03:16:28] 2025-10-11 01:15:58,960 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 03:16:28] 2025-10-11 01:15:59,009 | INFO     | [data] copytool_in thread has finished
[2025-10-11 03:16:28] 2025-10-11 01:15:59,242 | INFO     | [data] copytool_out thread has finished
[2025-10-11 03:16:28] 2025-10-11 01:15:59,576 | INFO     | [job] validate thread has finished
[2025-10-11 03:16:28] 2025-10-11 01:16:02,067 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 03:16:28] 2025-10-11 01:16:08,143 | INFO     | job.realtimelogging is not enabled
[2025-10-11 03:16:28] 2025-10-11 01:16:09,149 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 03:16:28] 2025-10-11 01:16:16,567 | INFO     | [monitor] cgroup control has ended
[2025-10-11 03:16:28] 2025-10-11 01:16:17,574 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140348900132672)>', '<ExcThread(monitor, started 140348349196032)>']
[2025-10-11 03:16:28] 2025-10-11 01:16:22,600 | INFO     | all workflow threads have been joined
[2025-10-11 03:16:28] 2025-10-11 01:16:22,600 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 03:16:28] 2025-10-11 01:16:22,600 | INFO     | traces error code: 0
[2025-10-11 03:16:28] 2025-10-11 01:16:22,600 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 03:16:28] 2025-10-11 01:16:27,965 | INFO     | PID=23120 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 03:16:28] 2025-10-11 01:16:27,965 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 03:16:28] 2025-10-11 01:16:27,965 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 03:16:28] 2025-10-11 01:16:27,966 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 03:16:28] 2025-10-11 01:16:27,966 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 03:16:28] 2025-10-11 01:16:27,966 | INFO     | [monitor] control thread has ended
[2025-10-11 03:16:28] 2025-10-11 01:16:28,088 [wrapper] ==== pilot stdout END ====
[2025-10-11 03:16:28] 2025-10-11 01:16:28,093 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 03:16:28] 2025-10-11 01:16:28,095 [wrapper] pilotpid: 23120
[2025-10-11 03:16:28] 2025-10-11 01:16:28,097 [wrapper] Pilot exit status: 0
[2025-10-11 03:16:28] 2025-10-11 01:16:28,105 [wrapper] pandaids: 6837331546
[2025-10-11 03:16:28] 2025-10-11 01:16:28,135 [wrapper] cleanup supervisor_pilot   43006 23121
[2025-10-11 03:16:28] 2025-10-11 01:16:28,137 [wrapper] Test setup, not cleaning
[2025-10-11 03:16:28] 2025-10-11 01:16:28,139 [wrapper] apfmon messages muted
[2025-10-11 03:16:28] 2025-10-11 01:16:28,141 [wrapper] ==== wrapper stdout END ====
[2025-10-11 03:16:28] 2025-10-11 01:16:28,143 [wrapper] ==== wrapper stderr END ====
[2025-10-11 03:16:28]  *** Error codes and diagnostics ***
[2025-10-11 03:16:28]     "exeErrorCode": 0,
[2025-10-11 03:16:28]     "exeErrorDiag": "",
[2025-10-11 03:16:28]     "pilotErrorCode": 0,
[2025-10-11 03:16:28]     "pilotErrorDiag": "",
[2025-10-11 03:16:28]  *** Listing of results directory ***
[2025-10-11 03:16:28] total 412384
[2025-10-11 03:16:28] -rw-r--r-- 1 boinc boinc      5112 Oct  9 12:51 queuedata.json
[2025-10-11 03:16:28] -rw-r--r-- 1 boinc boinc    557409 Oct  9 12:52 pilot3.tar.gz
[2025-10-11 03:16:28] -rwx------ 1 boinc boinc     36292 Oct  9 12:55 runpilot2-wrapper.sh
[2025-10-11 03:16:28] -rw-r--r-- 1 boinc boinc       100 Oct 11 02:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 03:16:28] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 02:27 run_atlas
[2025-10-11 03:16:28] -rw-r--r-- 1 boinc boinc       105 Oct 11 02:27 job.xml
[2025-10-11 03:16:28] -rw-r--r-- 2 boinc boinc 221349022 Oct 11 02:27 EVNT.46676267._000609.pool.root.1
[2025-10-11 03:16:28] -rw-r--r-- 1 boinc boinc      6533 Oct 11 02:27 init_data.xml
[2025-10-11 03:16:28] -rw-r--r-- 2 boinc boinc     15120 Oct 11 02:27 start_atlas.sh
[2025-10-11 03:16:28] drwxrwx--x 2 boinc boinc        68 Oct 11 02:27 shared
[2025-10-11 03:16:28] -rw-r--r-- 2 boinc boinc    569678 Oct 11 02:27 input.tar.gz
[2025-10-11 03:16:28] -rw-r--r-- 1 boinc boinc         0 Oct 11 02:27 boinc_lockfile
[2025-10-11 03:16:28] -rw-r--r-- 1 boinc boinc      2550 Oct 11 02:27 pandaJob.out
[2025-10-11 03:16:28] -rw------- 1 boinc boinc    975525 Oct 11 02:27 agis_schedconf.cvmfs.json
[2025-10-11 03:16:28] -rw------- 1 boinc boinc   1560580 Oct 11 02:27 agis_ddmendpoints.agis.ALL.json
[2025-10-11 03:16:28] drwx------ 5 boinc boinc      4096 Oct 11 02:27 pilot3
[2025-10-11 03:16:28] -rw------- 1 boinc boinc 195438563 Oct 11 03:15 HITS.46676269._014862.pool.root.1
[2025-10-11 03:16:28] -rw-r--r-- 1 boinc boinc       529 Oct 11 03:15 boinc_task_state.xml
[2025-10-11 03:16:28] -rw------- 1 boinc boinc        95 Oct 11 03:15 pilot_heartbeat.json
[2025-10-11 03:16:28] -rw------- 1 boinc boinc      1023 Oct 11 03:15 memory_monitor_summary.json
[2025-10-11 03:16:28] -rw------- 1 boinc boinc    357844 Oct 11 03:15 log.46676269._014862.job.log.tgz.1
[2025-10-11 03:16:28] -rw------- 1 boinc boinc      7795 Oct 11 03:15 heartbeat.json
[2025-10-11 03:16:28] -rw-r--r-- 1 boinc boinc      8192 Oct 11 03:16 boinc_mmap_file
[2025-10-11 03:16:28] -rw-r--r-- 1 boinc boinc        27 Oct 11 03:16 wrapper_checkpoint.txt
[2025-10-11 03:16:28] -rw------- 1 boinc boinc       745 Oct 11 03:16 pilotlog.txt
[2025-10-11 03:16:28] -rw------- 1 boinc boinc    447328 Oct 11 03:16 log.46676269._014862.job.log.1
[2025-10-11 03:16:28] -rw------- 1 boinc boinc       357 Oct 11 03:16 output.list
[2025-10-11 03:16:28] -rw-r--r-- 1 boinc boinc       620 Oct 11 03:16 runtime_log
[2025-10-11 03:16:28] -rw------- 1 boinc boinc    819200 Oct 11 03:16 result.tar.gz
[2025-10-11 03:16:28] -rw-r--r-- 1 boinc boinc      8727 Oct 11 03:16 runtime_log.err
[2025-10-11 03:16:28] -rw------- 1 boinc boinc       654 Oct 11 03:16 PClNDmBU3Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5QZNDmBWl2Mn.diag
[2025-10-11 03:16:28] -rw-r--r-- 1 boinc boinc     22021 Oct 11 03:16 stderr.txt
[2025-10-11 03:16:28] HITS file was successfully produced:
[2025-10-11 03:16:28] -rw------- 1 boinc boinc 195438563 Oct 11 03:15 shared/HITS.pool.root.1
[2025-10-11 03:16:28]  *** Contents of shared directory: ***
[2025-10-11 03:16:28] total 408400
[2025-10-11 03:16:28] -rw-r--r-- 2 boinc boinc 221349022 Oct 11 02:27 ATLAS.root_0
[2025-10-11 03:16:28] -rw-r--r-- 2 boinc boinc     15120 Oct 11 02:27 start_atlas.sh
[2025-10-11 03:16:28] -rw-r--r-- 2 boinc boinc    569678 Oct 11 02:27 input.tar.gz
[2025-10-11 03:16:28] -rw------- 1 boinc boinc 195438563 Oct 11 03:15 HITS.pool.root.1
[2025-10-11 03:16:28] -rw------- 1 boinc boinc    819200 Oct 11 03:16 result.tar.gz
03:16:29 (19311): run_atlas exited; CPU time 30502.927859
03:16:29 (19311): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN