Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:28:39 (293530): wrapper (7.7.26015): starting
05:28:39 (293530): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 05:28:39] Arguments: --nthreads 8
[2025-10-10 05:28:39] Threads: 8
[2025-10-10 05:28:39] Checking for CVMFS
[2025-10-10 05:28:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 05:28:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 05:28:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 05:28:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 05:28:41] 2.13.1.0 5299 2618 107032 151541 1 65 29597567 40960000 11966 16776704 0 4638754 99.773 1679633 36262 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 05:28:41] CVMFS is ok
[2025-10-10 05:28:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 05:28:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 05:28:41] Further information can be found at the LHC@home message board.
[2025-10-10 05:28:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 05:28:41] Checking for apptainer binary...
[2025-10-10 05:28:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 05:28:41] Running /usr/bin/apptainer --version
[2025-10-10 05:28:41] apptainer version 1.4.3-1.el9
[2025-10-10 05:28:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 05:28:42] c-210-33-2.aglt2.org
[2025-10-10 05:28:42] apptainer works
[2025-10-10 05:28:42] Set ATHENA_PROC_NUMBER=8
[2025-10-10 05:28:42] Set ATHENA_CORE_NUMBER=8
[2025-10-10 05:28:42] Starting ATLAS job with PandaID=6837376480
[2025-10-10 05:28:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 08:53:33]  *** The last 200 lines of the pilot log: ***
[2025-10-10 08:53:33] 2025-10-10 12:52:54,447 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 08:53:33] 2025-10-10 12:52:55,033 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-10 08:53:33] 2025-10-10 12:52:55,036 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2742.123875
[2025-10-10 08:53:33] 2025-10-10 12:52:55,052 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6837376480/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 08:53:33] 2025-10-10 12:52:55,053 | INFO     | extracted standard info from prmon json
[2025-10-10 08:53:33] 2025-10-10 12:52:55,053 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 08:53:33] 2025-10-10 12:52:55,053 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 08:53:33] 2025-10-10 12:52:55,053 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 08:53:33] 2025-10-10 12:52:55,054 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 08:53:33] 2025-10-10 12:52:55,062 | INFO     | fitting pss+swap vs Time
[2025-10-10 08:53:33] 2025-10-10 12:52:55,062 | INFO     | sum of square deviations: 2370753835.9492283
[2025-10-10 08:53:33] 2025-10-10 12:52:55,063 | INFO     | sum of deviations: -18747747017.11168
[2025-10-10 08:53:33] 2025-10-10 12:52:55,063 | INFO     | mean x: 1760094705.3705583
[2025-10-10 08:53:33] 2025-10-10 12:52:55,063 | INFO     | mean y: 2529224.0152284265
[2025-10-10 08:53:33] 2025-10-10 12:52:55,063 | INFO     | -- intersect: 13921228737.257994
[2025-10-10 08:53:33] 2025-10-10 12:52:55,064 | INFO     | intersect: 13921228737.257994
[2025-10-10 08:53:33] 2025-10-10 12:52:55,068 | INFO     | chi2: 2.9666930243564633
[2025-10-10 08:53:33] 2025-10-10 12:52:55,068 | INFO     | sum of square deviations: 2194810010.244805
[2025-10-10 08:53:33] 2025-10-10 12:52:55,069 | INFO     | sum of deviations: -5660436269.505201
[2025-10-10 08:53:33] 2025-10-10 12:52:55,070 | INFO     | mean x: 1760094552.8802083
[2025-10-10 08:53:33] 2025-10-10 12:52:55,070 | INFO     | mean y: 2540346.6302083335
[2025-10-10 08:53:33] 2025-10-10 12:52:55,070 | INFO     | -- intersect: 4541841242.0960655
[2025-10-10 08:53:33] 2025-10-10 12:52:55,070 | INFO     | intersect: 4541841242.0960655
[2025-10-10 08:53:33] 2025-10-10 12:52:55,070 | INFO     | chi2: 2.296299578978622
[2025-10-10 08:53:33] 2025-10-10 12:52:55,070 | INFO     | current chi2=2.296299578978622 (change=22.597331098092415 %)
[2025-10-10 08:53:33] 2025-10-10 12:52:55,070 | INFO     | right removable region: 191
[2025-10-10 08:53:33] 2025-10-10 12:52:55,070 | INFO     | sum of square deviations: 2194801164.479172
[2025-10-10 08:53:33] 2025-10-10 12:52:55,071 | INFO     | sum of deviations: -57084149145.20839
[2025-10-10 08:53:33] 2025-10-10 12:52:55,072 | INFO     | mean x: 1760094857.8645833
[2025-10-10 08:53:33] 2025-10-10 12:52:55,072 | INFO     | mean y: 2562160.1458333335
[2025-10-10 08:53:33] 2025-10-10 12:52:55,072 | INFO     | -- intersect: 45780521003.12771
[2025-10-10 08:53:33] 2025-10-10 12:52:55,076 | INFO     | intersect: 45780521003.12771
[2025-10-10 08:53:33] 2025-10-10 12:52:55,076 | INFO     | chi2: 1.0446194662014758
[2025-10-10 08:53:33] 2025-10-10 12:52:55,077 | INFO     | current chi2=1.0446194662014758 (change=64.78842072215829 %)
[2025-10-10 08:53:33] 2025-10-10 12:52:55,077 | INFO     | sum of square deviations: 2027779014.9946525
[2025-10-10 08:53:33] 2025-10-10 12:52:55,078 | INFO     | sum of deviations: -59435670461.72193
[2025-10-10 08:53:33] 2025-10-10 12:52:55,078 | INFO     | mean x: 1760095010.3582888
[2025-10-10 08:53:33] 2025-10-10 12:52:55,078 | INFO     | mean y: 2564268.3689839575
[2025-10-10 08:53:33] 2025-10-10 12:52:55,078 | INFO     | -- intersect: 51592222827.515366
[2025-10-10 08:53:33] 2025-10-10 12:52:55,078 | INFO     | intersect: 51592222827.515366
[2025-10-10 08:53:33] 2025-10-10 12:52:55,078 | INFO     | chi2: 1.0021193830068111
[2025-10-10 08:53:33] 2025-10-10 12:52:55,078 | INFO     | current chi2=1.0021193830068111 (change=4.068475130872939 %)
[2025-10-10 08:53:33] 2025-10-10 12:52:55,078 | INFO     | left removable region: 20
[2025-10-10 08:53:33] 2025-10-10 12:52:55,079 | INFO     | sum of square deviations: 1550595775.7894723
[2025-10-10 08:53:33] 2025-10-10 12:52:55,080 | INFO     | sum of deviations: -31719926601.736843
[2025-10-10 08:53:33] 2025-10-10 12:52:55,080 | INFO     | mean x: 1760095132.368421
[2025-10-10 08:53:33] 2025-10-10 12:52:55,080 | INFO     | mean y: 2562321.1228070175
[2025-10-10 08:53:33] 2025-10-10 12:52:55,084 | INFO     | -- intersect: 36008134684.02649
[2025-10-10 08:53:33] 2025-10-10 12:52:55,084 | INFO     | intersect: 36008134684.02649
[2025-10-10 08:53:33] 2025-10-10 12:52:55,084 | INFO     | chi2: 0.2610091000114122
[2025-10-10 08:53:33] 2025-10-10 12:52:55,085 | INFO     | -- intersect: 36008134684.02649
[2025-10-10 08:53:33] 2025-10-10 12:52:55,085 | INFO     | current memory leak: -20.46 B/s (using 171 data points, chi2=0.26)
[2025-10-10 08:53:33] 2025-10-10 12:52:55,085 | INFO     | could have reported an average CPU frequency of 2802 MHz (10 samples)
[2025-10-10 08:53:33] 2025-10-10 12:52:55,085 | INFO     | ..............................
[2025-10-10 08:53:33] 2025-10-10 12:52:55,086 | INFO     | . Timing measurements:
[2025-10-10 08:53:33] 2025-10-10 12:52:55,086 | INFO     | . get job = 0 s
[2025-10-10 08:53:33] 2025-10-10 12:52:55,086 | INFO     | . initial setup = 5 s
[2025-10-10 08:53:33] 2025-10-10 12:52:55,090 | INFO     | . payload setup = 38 s
[2025-10-10 08:53:33] 2025-10-10 12:52:55,090 | INFO     | . stage-in = 0 s
[2025-10-10 08:53:33] 2025-10-10 12:52:55,090 | INFO     | . payload execution = 12033 s
[2025-10-10 08:53:33] 2025-10-10 12:52:55,090 | INFO     | . stage-out = 4 s
[2025-10-10 08:53:33] 2025-10-10 12:52:55,090 | INFO     | . log creation = 0 s
[2025-10-10 08:53:33] 2025-10-10 12:52:55,090 | INFO     | ..............................
[2025-10-10 08:53:33] 2025-10-10 12:52:55,218 | INFO     | time since job start (12195s) is within the limit (172800.0s)
[2025-10-10 08:53:33] 2025-10-10 12:52:55,259 | INFO     | 
[2025-10-10 08:53:33] 2025-10-10 12:52:55,259 | INFO     | job summary report
[2025-10-10 08:53:33] 2025-10-10 12:52:55,259 | INFO     | --------------------------------------------------
[2025-10-10 08:53:33] 2025-10-10 12:52:55,259 | INFO     | PanDA job id: 6837376480
[2025-10-10 08:53:33] 2025-10-10 12:52:55,259 | INFO     | task id: 46676269
[2025-10-10 08:53:33] 2025-10-10 12:52:55,259 | INFO     | errors: (none)
[2025-10-10 08:53:33] 2025-10-10 12:52:55,259 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 08:53:33] 2025-10-10 12:52:55,259 | INFO     | pilot state: finished 
[2025-10-10 08:53:33] 2025-10-10 12:52:55,259 | INFO     | transexitcode: 0
[2025-10-10 08:53:33] 2025-10-10 12:52:55,260 | INFO     | exeerrorcode: 0
[2025-10-10 08:53:33] 2025-10-10 12:52:55,260 | INFO     | exeerrordiag: 
[2025-10-10 08:53:33] 2025-10-10 12:52:55,260 | INFO     | exitcode: 0
[2025-10-10 08:53:33] 2025-10-10 12:52:55,260 | INFO     | exitmsg: OK
[2025-10-10 08:53:33] 2025-10-10 12:52:55,260 | INFO     | cpuconsumptiontime: 38932 s
[2025-10-10 08:53:33] 2025-10-10 12:52:55,260 | INFO     | nevents: 400
[2025-10-10 08:53:33] 2025-10-10 12:52:55,260 | INFO     | neventsw: 0
[2025-10-10 08:53:33] 2025-10-10 12:52:55,260 | INFO     | pid: 307789
[2025-10-10 08:53:33] 2025-10-10 12:52:55,260 | INFO     | pgrp: 307789
[2025-10-10 08:53:33] 2025-10-10 12:52:55,260 | INFO     | corecount: 8
[2025-10-10 08:53:33] 2025-10-10 12:52:55,260 | INFO     | event service: False
[2025-10-10 08:53:33] 2025-10-10 12:52:55,260 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 23: 2348913, 35: 2349203, 46: 2349231, 12077: 2379231, 12078: 2379230, 12083: 2388284, 12086: 2388340, 12120: 2388534}
[2025-10-10 08:53:33] 2025-10-10 12:52:55,260 | INFO     | --------------------------------------------------
[2025-10-10 08:53:33] 2025-10-10 12:52:55,260 | INFO     | 
[2025-10-10 08:53:33] 2025-10-10 12:52:55,260 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-10 08:53:33] 2025-10-10 12:52:55,310 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 08:53:33] 2025-10-10 12:52:55,311 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 08:53:33] 2025-10-10 12:52:55,311 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 08:53:33] 2025-10-10 12:52:55,311 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 08:53:33] 2025-10-10 12:52:55,311 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 08:53:33] 2025-10-10 12:52:55,311 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 08:53:33] 2025-10-10 12:52:55,311 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 08:53:33] 2025-10-10 12:52:55,311 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 08:53:33] 2025-10-10 12:52:55,311 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 08:53:33] 2025-10-10 12:52:55,311 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 08:53:33] 2025-10-10 12:52:55,311 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 08:53:33] 2025-10-10 12:52:55,311 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 08:53:33] 2025-10-10 12:52:55,311 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 08:53:33] 2025-10-10 12:52:55,311 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 08:53:33] 2025-10-10 12:52:55,312 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 08:53:33] 2025-10-10 12:52:55,312 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 08:53:33] 2025-10-10 12:52:55,312 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 08:53:33] 2025-10-10 12:52:55,312 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 08:53:33] 2025-10-10 12:52:55,312 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 08:53:33] 2025-10-10 12:52:55,312 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 08:53:33] 2025-10-10 12:52:55,312 | INFO     | job 6837376480 has completed (purged errors)
[2025-10-10 08:53:33] 2025-10-10 12:52:55,312 | INFO     | overall cleanup function is called
[2025-10-10 08:53:33] 2025-10-10 12:52:56,327 | INFO     | --- collectZombieJob: --- 10, [307789]
[2025-10-10 08:53:33] 2025-10-10 12:52:56,327 | INFO     | zombie collector waiting for pid 307789
[2025-10-10 08:53:33] 2025-10-10 12:52:56,327 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 08:53:33] 2025-10-10 12:52:56,327 | INFO     | collected zombie processes
[2025-10-10 08:53:33] 2025-10-10 12:52:56,327 | INFO     | will attempt to kill all subprocesses of pid=307789
[2025-10-10 08:53:33] 2025-10-10 12:52:57,189 | INFO     | process IDs to be killed: [307789] (in reverse order)
[2025-10-10 08:53:33] 2025-10-10 12:52:58,046 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 08:53:33] 2025-10-10 12:52:58,046 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 08:53:33] 2025-10-10 12:52:58,084 | INFO     | did not find any defunct processes belonging to 307789
[2025-10-10 08:53:33] 2025-10-10 12:52:58,129 | INFO     | did not find any defunct processes belonging to 307789
[2025-10-10 08:53:33] 2025-10-10 12:52:58,130 | INFO     | ready for new job
[2025-10-10 08:53:33] 2025-10-10 12:52:58,138 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 08:53:33] 2025-10-10 12:52:58,142 | INFO     | ***************************************
[2025-10-10 08:53:33] 2025-10-10 12:52:58,143 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 08:53:33] 2025-10-10 12:52:58,143 | INFO     | ***************************************
[2025-10-10 08:53:33] 2025-10-10 12:52:58,143 | INFO     | 
[2025-10-10 08:53:33] 2025-10-10 12:52:58,159 | INFO     | architecture information:
[2025-10-10 08:53:33] 2025-10-10 12:52:58,167 | INFO     | executing command: cat /etc/os-release
[2025-10-10 08:53:33] 2025-10-10 12:52:58,226 | INFO     | cat /etc/os-release:
[2025-10-10 08:53:33] NAME="CentOS Linux"
[2025-10-10 08:53:33] VERSION="7 (Core)"
[2025-10-10 08:53:33] ID="centos"
[2025-10-10 08:53:33] ID_LIKE="rhel fedora"
[2025-10-10 08:53:33] VERSION_ID="7"
[2025-10-10 08:53:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 08:53:33] ANSI_COLOR="0;31"
[2025-10-10 08:53:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 08:53:33] HOME_URL="https://www.centos.org/"
[2025-10-10 08:53:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 08:53:33] 
[2025-10-10 08:53:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 08:53:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 08:53:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 08:53:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 08:53:33] 
[2025-10-10 08:53:33] 2025-10-10 12:52:58,227 | INFO     | ***************************************
[2025-10-10 08:53:33] 2025-10-10 12:52:58,730 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-10 08:53:33] 2025-10-10 12:52:58,794 | INFO     | sufficient remaining disk space (74172071936 B)
[2025-10-10 08:53:33] 2025-10-10 12:52:58,795 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 08:53:33] 2025-10-10 12:52:58,795 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 08:53:33] 2025-10-10 12:52:58,795 | INFO     | update_server=False
[2025-10-10 08:53:33] 2025-10-10 12:52:58,795 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 08:53:33] 2025-10-10 12:52:58,795 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 08:53:33] 2025-10-10 12:52:58,795 | INFO     | aborting loop
[2025-10-10 08:53:33] 2025-10-10 12:52:58,796 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 08:53:33] 2025-10-10 12:52:58,983 | INFO     | all job control threads have been joined
[2025-10-10 08:53:33] 2025-10-10 12:52:59,168 | INFO     | all data control threads have been joined
[2025-10-10 08:53:33] 2025-10-10 12:52:59,364 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 08:53:33] 2025-10-10 12:52:59,779 | INFO     | all payload control threads have been joined
[2025-10-10 08:53:33] 2025-10-10 12:52:59,803 | INFO     | [job] retrieve thread has finished
[2025-10-10 08:53:33] 2025-10-10 12:52:59,804 | INFO     | [job] job monitor thread has finished
[2025-10-10 08:53:33] 2025-10-10 12:52:59,989 | INFO     | [job] control thread has finished
[2025-10-10 08:53:33] 2025-10-10 12:53:00,174 | INFO     | [data] control thread has finished
[2025-10-10 08:53:33] 2025-10-10 12:53:00,274 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 08:53:33] 2025-10-10 12:53:00,528 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 08:53:33] 2025-10-10 12:53:00,627 | INFO     | [job] validate thread has finished
[2025-10-10 08:53:33] 2025-10-10 12:53:00,636 | INFO     | [data] copytool_in thread has finished
[2025-10-10 08:53:33] 2025-10-10 12:53:00,655 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 08:53:33] 2025-10-10 12:53:00,772 | INFO     | [payload] failed_post thread has finished
[2025-10-10 08:53:33] 2025-10-10 12:53:00,785 | INFO     | [payload] control thread has finished
[2025-10-10 08:53:33] 2025-10-10 12:53:00,805 | INFO     | [data] copytool_out thread has finished
[2025-10-10 08:53:33] 2025-10-10 12:53:00,887 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 08:53:33] 2025-10-10 12:53:00,894 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 08:53:33] 2025-10-10 12:53:00,972 | INFO     | [payload] validate_post thread has finished
[2025-10-10 08:53:33] 2025-10-10 12:53:01,280 | INFO     | [job] queue monitor thread has finished
[2025-10-10 08:53:33] 2025-10-10 12:53:01,806 | INFO     | [monitor] cgroup control has ended
[2025-10-10 08:53:33] 2025-10-10 12:53:03,375 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 08:53:33] 2025-10-10 12:53:04,377 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140088763938624)>', '<ExcThread(monitor, started 140088101021440)>']
[2025-10-10 08:53:33] 2025-10-10 12:53:09,403 | INFO     | all workflow threads have been joined
[2025-10-10 08:53:33] 2025-10-10 12:53:09,403 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 08:53:33] 2025-10-10 12:53:09,403 | INFO     | traces error code: 0
[2025-10-10 08:53:33] 2025-10-10 12:53:09,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 08:53:33] 2025-10-10 12:53:30,755 | INFO     | PID=297390 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 08:53:33] 2025-10-10 12:53:30,755 | INFO     | .. there are 10 such processes running
[2025-10-10 08:53:33] 2025-10-10 12:53:30,756 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 08:53:33] 2025-10-10 12:53:30,756 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 08:53:33] 2025-10-10 12:53:30,756 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 08:53:33] 2025-10-10 12:53:30,756 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 08:53:33] 2025-10-10 12:53:30,757 | CRITICAL | thread 'MainThread' is not alive
[2025-10-10 08:53:33] 2025-10-10 12:53:30,757 | INFO     | [monitor] control thread has ended
[2025-10-10 08:53:33] 2025-10-10 12:53:31,850 [wrapper] ==== pilot stdout END ====
[2025-10-10 08:53:33] 2025-10-10 12:53:31,872 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 08:53:33] 2025-10-10 12:53:31,889 [wrapper] pilotpid: 297390
[2025-10-10 08:53:33] 2025-10-10 12:53:31,911 [wrapper] Pilot exit status: 0
[2025-10-10 08:53:33] 2025-10-10 12:53:32,177 [wrapper] pandaids: 6837376480
[2025-10-10 08:53:33] 2025-10-10 12:53:32,981 [wrapper] cleanup supervisor_pilot  625299 297391
[2025-10-10 08:53:33] 2025-10-10 12:53:33,037 [wrapper] Test setup, not cleaning
[2025-10-10 08:53:33] 2025-10-10 12:53:33,101 [wrapper] apfmon messages muted
[2025-10-10 08:53:33] 2025-10-10 12:53:33,164 [wrapper] ==== wrapper stdout END ====
[2025-10-10 08:53:33] 2025-10-10 12:53:33,338 [wrapper] ==== wrapper stderr END ====
[2025-10-10 08:53:33]  *** Error codes and diagnostics ***
[2025-10-10 08:53:33]     "exeErrorCode": 0,
[2025-10-10 08:53:33]     "exeErrorDiag": "",
[2025-10-10 08:53:33]     "pilotErrorCode": 0,
[2025-10-10 08:53:33]     "pilotErrorDiag": "",
[2025-10-10 08:53:33]  *** Listing of results directory ***
[2025-10-10 08:53:33] total 409628
[2025-10-10 08:53:33] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 19:47 pilot3.tar.gz
[2025-10-10 08:53:33] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 19:57 queuedata.json
[2025-10-10 08:53:33] -rwx------. 1 boincer umatlas     36292 Oct  9 19:58 runpilot2-wrapper.sh
[2025-10-10 08:53:33] -rw-r--r--. 1 boincer umatlas       100 Oct 10 05:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 08:53:33] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 05:28 run_atlas
[2025-10-10 08:53:33] -rw-r--r--. 1 boincer umatlas       105 Oct 10 05:28 job.xml
[2025-10-10 08:53:33] -rw-r--r--. 2 boincer umatlas 220444342 Oct 10 05:28 EVNT.46676267._001197.pool.root.1
[2025-10-10 08:53:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 05:28 start_atlas.sh
[2025-10-10 08:53:33] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 05:28 shared
[2025-10-10 08:53:33] -rw-r--r--. 2 boincer umatlas    569679 Oct 10 05:28 input.tar.gz
[2025-10-10 08:53:33] -rw-r--r--. 1 boincer umatlas         0 Oct 10 05:28 boinc_lockfile
[2025-10-10 08:53:33] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 05:28 pandaJob.out
[2025-10-10 08:53:33] -rw-------. 1 boincer umatlas    975511 Oct 10 05:29 agis_schedconf.cvmfs.json
[2025-10-10 08:53:33] drwx------. 5 boincer umatlas      4096 Oct 10 05:29 pilot3
[2025-10-10 08:53:33] -rw-r--r--. 1 boincer umatlas      6839 Oct 10 08:49 init_data.xml
[2025-10-10 08:53:33] -rw-------. 1 boincer umatlas 190935539 Oct 10 08:50 HITS.46676269._028562.pool.root.1
[2025-10-10 08:53:33] -rw-r--r--. 1 boincer umatlas       531 Oct 10 08:50 boinc_task_state.xml
[2025-10-10 08:53:33] -rw-------. 1 boincer umatlas      1043 Oct 10 08:52 memory_monitor_summary.json
[2025-10-10 08:53:33] -rw-------. 1 boincer umatlas   1560580 Oct 10 08:52 agis_ddmendpoints.agis.ALL.json
[2025-10-10 08:53:33] -rw-------. 1 boincer umatlas    445135 Oct 10 08:52 log.46676269._028562.job.log.tgz.1
[2025-10-10 08:53:33] -rw-------. 1 boincer umatlas      7832 Oct 10 08:52 heartbeat.json
[2025-10-10 08:53:33] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 08:53 boinc_mmap_file
[2025-10-10 08:53:33] -rw-r--r--. 1 boincer umatlas        28 Oct 10 08:53 wrapper_checkpoint.txt
[2025-10-10 08:53:33] -rw-------. 1 boincer umatlas        95 Oct 10 08:53 pilot_heartbeat.json
[2025-10-10 08:53:33] -rw-------. 1 boincer umatlas       892 Oct 10 08:53 pilotlog.txt
[2025-10-10 08:53:33] -rw-------. 1 boincer umatlas   1644060 Oct 10 08:53 log.46676269._028562.job.log.1
[2025-10-10 08:53:33] -rw-------. 1 boincer umatlas       357 Oct 10 08:53 output.list
[2025-10-10 08:53:33] -rw-r--r--. 1 boincer umatlas       620 Oct 10 08:53 runtime_log
[2025-10-10 08:53:33] -rw-------. 1 boincer umatlas   2109440 Oct 10 08:53 result.tar.gz
[2025-10-10 08:53:33] -rw-r--r--. 1 boincer umatlas      8714 Oct 10 08:53 runtime_log.err
[2025-10-10 08:53:33] -rw-------. 1 boincer umatlas       656 Oct 10 08:53 0ImLDmzhFR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7hbNDmUfOtln.diag
[2025-10-10 08:53:33] -rw-r--r--. 1 boincer umatlas     21205 Oct 10 08:53 stderr.txt
[2025-10-10 08:53:33] HITS file was successfully produced:
[2025-10-10 08:53:33] -rw-------. 1 boincer umatlas 190935539 Oct 10 08:50 shared/HITS.pool.root.1
[2025-10-10 08:53:33]  *** Contents of shared directory: ***
[2025-10-10 08:53:33] total 404384
[2025-10-10 08:53:33] -rw-r--r--. 2 boincer umatlas 220444342 Oct 10 05:28 ATLAS.root_0
[2025-10-10 08:53:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 05:28 start_atlas.sh
[2025-10-10 08:53:33] -rw-r--r--. 2 boincer umatlas    569679 Oct 10 05:28 input.tar.gz
[2025-10-10 08:53:33] -rw-------. 1 boincer umatlas 190935539 Oct 10 08:50 HITS.pool.root.1
[2025-10-10 08:53:33] -rw-------. 1 boincer umatlas   2109440 Oct 10 08:53 result.tar.gz
08:53:35 (293530): run_atlas exited; CPU time 39165.687325
08:53:35 (293530): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN