Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:11:56 (2580457): wrapper (7.7.26015): starting
19:11:56 (2580457): wrapper: running run_atlas (--nthreads 4)
[2025-10-10 19:11:56] Arguments: --nthreads 4
[2025-10-10 19:11:56] Threads: 4
[2025-10-10 19:11:56] Checking for CVMFS
[2025-10-10 19:11:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 19:11:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 19:11:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 19:11:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 19:11:56] 2.9.2.0 1999482 1672 87820 151555 2 57 33295047 36864000 0 130560 0 1506117 99.991 55911 955 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-10 19:11:56] CVMFS is ok
[2025-10-10 19:11:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 19:11:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 19:11:56] Further information can be found at the LHC@home message board.
[2025-10-10 19:11:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 19:11:56] Checking for apptainer binary...
[2025-10-10 19:11:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 19:11:56] Running /usr/bin/apptainer --version
[2025-10-10 19:11:56] apptainer version 1.4.1-1.1
[2025-10-10 19:11:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 19:11:56] magicA250
[2025-10-10 19:11:56] apptainer works
[2025-10-10 19:11:56] Set ATHENA_PROC_NUMBER=4
[2025-10-10 19:11:56] Set ATHENA_CORE_NUMBER=4
[2025-10-10 19:11:57] Starting ATLAS job with PandaID=6837376410
[2025-10-10 19:11:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 20:25:19]  *** The last 200 lines of the pilot log: ***
[2025-10-10 20:25:19] 2025-10-10 18:24:47,708 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 20:25:19] 2025-10-10 18:24:47,709 | INFO     | ***************************************
[2025-10-10 20:25:19] 2025-10-10 18:24:47,709 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 20:25:19] 2025-10-10 18:24:47,709 | INFO     | ***************************************
[2025-10-10 20:25:19] 2025-10-10 18:24:47,709 | INFO     | 
[2025-10-10 20:25:19] 2025-10-10 18:24:47,710 | INFO     | architecture information:
[2025-10-10 20:25:19] 2025-10-10 18:24:47,710 | INFO     | executing command: cat /etc/os-release
[2025-10-10 20:25:19] 2025-10-10 18:24:47,724 | INFO     | cat /etc/os-release:
[2025-10-10 20:25:19] NAME="CentOS Linux"
[2025-10-10 20:25:19] VERSION="7 (Core)"
[2025-10-10 20:25:19] ID="centos"
[2025-10-10 20:25:19] ID_LIKE="rhel fedora"
[2025-10-10 20:25:19] VERSION_ID="7"
[2025-10-10 20:25:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 20:25:19] ANSI_COLOR="0;31"
[2025-10-10 20:25:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 20:25:19] HOME_URL="https://www.centos.org/"
[2025-10-10 20:25:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 20:25:19] 
[2025-10-10 20:25:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 20:25:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 20:25:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 20:25:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 20:25:19] 
[2025-10-10 20:25:19] 2025-10-10 18:24:47,724 | INFO     | ***************************************
[2025-10-10 20:25:19] 2025-10-10 18:24:48,227 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-10 20:25:19] 2025-10-10 18:24:48,244 | INFO     | sufficient remaining disk space (326204653568 B)
[2025-10-10 20:25:19] 2025-10-10 18:24:48,245 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 20:25:19] 2025-10-10 18:24:48,245 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 20:25:19] 2025-10-10 18:24:48,245 | INFO     | update_server=False
[2025-10-10 20:25:19] 2025-10-10 18:24:48,245 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 20:25:19] 2025-10-10 18:24:48,245 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 20:25:19] 2025-10-10 18:24:48,245 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 20:25:19] 2025-10-10 18:24:48,285 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 20:25:19] 2025-10-10 18:24:48,285 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 20:25:19] 2025-10-10 18:24:48,285 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 20:25:19] 2025-10-10 18:24:48,285 | INFO     | will abort loop
[2025-10-10 20:25:19] 2025-10-10 18:24:48,715 | INFO     | all job control threads have been joined
[2025-10-10 20:25:19] 2025-10-10 18:24:49,017 | INFO     | all data control threads have been joined
[2025-10-10 20:25:19] 2025-10-10 18:24:49,250 | INFO     | [job] retrieve thread has finished
[2025-10-10 20:25:19] 2025-10-10 18:24:49,251 | INFO     | [job] queue monitor thread has finished
[2025-10-10 20:25:19] 2025-10-10 18:24:49,291 | INFO     | [job] job monitor thread has finished
[2025-10-10 20:25:19] 2025-10-10 18:24:49,322 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 20:25:19] 2025-10-10 18:24:49,361 | INFO     | [payload] failed_post thread has finished
[2025-10-10 20:25:19] 2025-10-10 18:24:49,553 | INFO     | all payload control threads have been joined
[2025-10-10 20:25:19] 2025-10-10 18:24:49,721 | INFO     | [job] control thread has finished
[2025-10-10 20:25:19] 2025-10-10 18:24:49,758 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 20:25:19] 2025-10-10 18:24:49,900 | INFO     | [job] validate thread has finished
[2025-10-10 20:25:19] 2025-10-10 18:24:49,917 | INFO     | [payload] validate_post thread has finished
[2025-10-10 20:25:19] 2025-10-10 18:24:50,023 | INFO     | [data] control thread has finished
[2025-10-10 20:25:19] 2025-10-10 18:24:50,050 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 20:25:19] 2025-10-10 18:24:50,138 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 20:25:19] 2025-10-10 18:24:50,285 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 20:25:19] 2025-10-10 18:24:50,399 | INFO     | [data] copytool_in thread has finished
[2025-10-10 20:25:19] 2025-10-10 18:24:50,559 | INFO     | [payload] control thread has finished
[2025-10-10 20:25:19] 2025-10-10 18:24:51,328 | INFO     | [data] copytool_out thread has finished
[2025-10-10 20:25:19] 2025-10-10 18:24:52,250 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 20:25:19] 2025-10-10 18:25:09,794 | INFO     | [monitor] cgroup control has ended
[2025-10-10 20:25:19] 2025-10-10 18:25:11,225 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140715396933440)>', '<ExcThread(monitor, started 140714470012672)>']
[2025-10-10 20:25:19] 2025-10-10 18:25:16,251 | INFO     | all workflow threads have been joined
[2025-10-10 20:25:19] 2025-10-10 18:25:16,251 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 20:25:19] 2025-10-10 18:25:16,251 | INFO     | traces error code: 0
[2025-10-10 20:25:19] 2025-10-10 18:25:16,251 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 20:25:19] 2025-10-10 18:25:19,094 | INFO     | PID=2584256 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 20:25:19] 2025-10-10 18:25:19,094 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 20:25:19] 2025-10-10 18:25:19,094 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 20:25:19] 2025-10-10 18:25:19,094 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 20:25:19] 2025-10-10 18:25:19,094 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 20:25:19] 2025-10-10 18:25:19,094 | INFO     | [monitor] control thread has ended
[2025-10-10 20:25:19] 2025-10-10 18:25:19,170 [wrapper] ==== pilot stdout END ====
[2025-10-10 20:25:19] 2025-10-10 18:25:19,174 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 20:25:19] 2025-10-10 18:25:19,178 [wrapper] pilotpid: 2584256
[2025-10-10 20:25:19] 2025-10-10 18:25:19,182 [wrapper] Pilot exit status: 0
[2025-10-10 20:25:19] 2025-10-10 18:25:19,194 [wrapper] pandaids: 6837376410
[2025-10-10 20:25:19] 2025-10-10 18:25:19,217 [wrapper] cleanup supervisor_pilot 2601222 2584257
[2025-10-10 20:25:19] 2025-10-10 18:25:19,221 [wrapper] Test setup, not cleaning
[2025-10-10 20:25:19] 2025-10-10 18:25:19,225 [wrapper] apfmon messages muted
[2025-10-10 20:25:19] 2025-10-10 18:25:19,229 [wrapper] ==== wrapper stdout END ====
[2025-10-10 20:25:19] 2025-10-10 18:25:19,232 [wrapper] ==== wrapper stderr END ====
[2025-10-10 20:25:19]  *** Error codes and diagnostics ***
[2025-10-10 20:25:19]     "exeErrorCode": 0,
[2025-10-10 20:25:19]     "exeErrorDiag": "",
[2025-10-10 20:25:19]     "pilotErrorCode": 0,
[2025-10-10 20:25:19]     "pilotErrorDiag": "",
[2025-10-10 20:25:19]  *** Listing of results directory ***
[2025-10-10 20:25:19] total 411984
[2025-10-10 20:25:19] -rw-r--r-- 1 boinc boinc    557409 Oct 10 01:47 pilot3.tar.gz
[2025-10-10 20:25:19] -rw-r--r-- 1 boinc boinc      5112 Oct 10 01:56 queuedata.json
[2025-10-10 20:25:19] -rwx------ 1 boinc boinc     36292 Oct 10 01:56 runpilot2-wrapper.sh
[2025-10-10 20:25:19] -rw-r--r-- 1 boinc boinc       100 Oct 10 19:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 20:25:19] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 19:11 run_atlas
[2025-10-10 20:25:19] -rw-r--r-- 1 boinc boinc       105 Oct 10 19:11 job.xml
[2025-10-10 20:25:19] -rw-r--r-- 2 boinc boinc 220331955 Oct 10 19:11 EVNT.46676267._001195.pool.root.1
[2025-10-10 20:25:19] -rw-r--r-- 2 boinc boinc    569679 Oct 10 19:11 input.tar.gz
[2025-10-10 20:25:19] -rw-r--r-- 2 boinc boinc     15120 Oct 10 19:11 start_atlas.sh
[2025-10-10 20:25:19] drwxrwx--x 2 boinc boinc      4096 Oct 10 19:11 shared
[2025-10-10 20:25:19] -rw-r--r-- 1 boinc boinc         0 Oct 10 19:11 boinc_setup_complete
[2025-10-10 20:25:19] -rw-r--r-- 1 boinc boinc      6378 Oct 10 19:11 init_data.xml
[2025-10-10 20:25:19] -rw-r--r-- 1 boinc boinc         0 Oct 10 19:11 boinc_lockfile
[2025-10-10 20:25:19] -rw-r--r-- 1 boinc boinc      2549 Oct 10 19:11 pandaJob.out
[2025-10-10 20:25:19] -rw------- 1 boinc boinc    975525 Oct 10 19:12 agis_schedconf.cvmfs.json
[2025-10-10 20:25:19] -rw------- 1 boinc boinc   1560580 Oct 10 19:12 agis_ddmendpoints.agis.ALL.json
[2025-10-10 20:25:19] drwx------ 5 boinc boinc      4096 Oct 10 19:12 pilot3
[2025-10-10 20:25:19] -rw------- 1 boinc boinc 195846178 Oct 10 20:24 HITS.46676269._028492.pool.root.1
[2025-10-10 20:25:19] -rw-r--r-- 1 boinc boinc       529 Oct 10 20:24 boinc_task_state.xml
[2025-10-10 20:25:19] -rw------- 1 boinc boinc        95 Oct 10 20:24 pilot_heartbeat.json
[2025-10-10 20:25:19] -rw------- 1 boinc boinc      1026 Oct 10 20:24 memory_monitor_summary.json
[2025-10-10 20:25:19] -rw------- 1 boinc boinc    249999 Oct 10 20:24 log.46676269._028492.job.log.tgz.1
[2025-10-10 20:25:19] -rw------- 1 boinc boinc      7770 Oct 10 20:24 heartbeat.json
[2025-10-10 20:25:19] -rw-r--r-- 1 boinc boinc      8192 Oct 10 20:24 boinc_mmap_file
[2025-10-10 20:25:19] -rw-r--r-- 1 boinc boinc        27 Oct 10 20:24 wrapper_checkpoint.txt
[2025-10-10 20:25:19] -rw------- 1 boinc boinc       747 Oct 10 20:25 pilotlog.txt
[2025-10-10 20:25:19] -rw------- 1 boinc boinc    647767 Oct 10 20:25 log.46676269._028492.job.log.1
[2025-10-10 20:25:19] -rw------- 1 boinc boinc       357 Oct 10 20:25 output.list
[2025-10-10 20:25:19] -rw-r--r-- 1 boinc boinc       620 Oct 10 20:25 runtime_log
[2025-10-10 20:25:19] -rw------- 1 boinc boinc    921600 Oct 10 20:25 result.tar.gz
[2025-10-10 20:25:19] -rw-r--r-- 1 boinc boinc      8792 Oct 10 20:25 runtime_log.err
[2025-10-10 20:25:19] -rw------- 1 boinc boinc       661 Oct 10 20:25 j2LODmffFR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIhbNDmyJkzZm.diag
[2025-10-10 20:25:19] -rw-r--r-- 1 boinc boinc      9680 Oct 10 20:25 stderr.txt
[2025-10-10 20:25:19] HITS file was successfully produced:
[2025-10-10 20:25:19] -rw------- 1 boinc boinc 195846178 Oct 10 20:24 shared/HITS.pool.root.1
[2025-10-10 20:25:19]  *** Contents of shared directory: ***
[2025-10-10 20:25:19] total 407912
[2025-10-10 20:25:19] -rw-r--r-- 2 boinc boinc 220331955 Oct 10 19:11 ATLAS.root_0
[2025-10-10 20:25:19] -rw-r--r-- 2 boinc boinc    569679 Oct 10 19:11 input.tar.gz
[2025-10-10 20:25:19] -rw-r--r-- 2 boinc boinc     15120 Oct 10 19:11 start_atlas.sh
[2025-10-10 20:25:19] -rw------- 1 boinc boinc 195846178 Oct 10 20:24 HITS.pool.root.1
[2025-10-10 20:25:19] -rw------- 1 boinc boinc    921600 Oct 10 20:25 result.tar.gz
20:25:20 (2580457): run_atlas exited; CPU time 16257.760268
20:25:20 (2580457): called boinc_finish(0)

</stderr_txt>
]]>

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