Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-10 05:18:00 (25320): vboxwrapper version 26210
2025-10-10 05:18:00 (25320): BOINC client version: 8.0.2
2025-10-10 05:18:01 (25320): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-10-10 05:18:01 (25320): Successfully copied 'init_data.xml' to the shared directory.
2025-10-10 05:18:01 (25320): Create VM. (boinc_216d49ed5b9cac40, slot#1)
2025-10-10 05:18:02 (25320): Setting Memory Size for VM. (4200MB)
2025-10-10 05:18:02 (25320): Setting CPU Count for VM. (2)
2025-10-10 05:18:02 (25320): Setting Chipset Options for VM.
2025-10-10 05:18:03 (25320): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-10 05:18:03 (25320): Setting Boot Options for VM.
2025-10-10 05:18:03 (25320): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-10 05:18:04 (25320): Enabling VM Network Access.
2025-10-10 05:18:04 (25320): Disabling USB Support for VM.
2025-10-10 05:18:04 (25320): Disabling COM Port Support for VM.
2025-10-10 05:18:04 (25320): Disabling LPT Port Support for VM.
2025-10-10 05:18:05 (25320): Disabling Audio Support for VM.
2025-10-10 05:18:05 (25320): Disabling Clipboard Support for VM.
2025-10-10 05:18:05 (25320): Disabling Drag and Drop Support for VM.
2025-10-10 05:18:06 (25320): Adding storage controller(s) to VM.
2025-10-10 05:18:06 (25320): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-10 05:18:08 (25320): Adding VirtualBox Guest Additions to VM.
2025-10-10 05:18:08 (25320): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-10 05:18:09 (25320): forwarding host port 62766 to guest port 80
2025-10-10 05:18:09 (25320): Enabling remote desktop for VM.
2025-10-10 05:18:09 (25320): Required extension pack not installed, remote desktop not enabled.
2025-10-10 05:18:09 (25320): Enabling shared directory for VM.
2025-10-10 05:18:10 (25320): Starting VM using VBoxManage interface. (boinc_216d49ed5b9cac40, slot#1)
2025-10-10 05:18:18 (25320): Successfully started VM. (PID = '33504')
2025-10-10 05:18:18 (25320): Reporting VM Process ID to BOINC.
2025-10-10 05:18:18 (25320): Guest Log: BIOS: VirtualBox 7.0.6
2025-10-10 05:18:18 (25320): Guest Log: CPUID EDX: 0x178bfbff
2025-10-10 05:18:18 (25320): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-10 05:18:18 (25320): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-10 05:18:18 (25320): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-10 05:18:18 (25320): Detected: Web Application Enabled (http://localhost:62766)
2025-10-10 05:18:18 (25320): Preference change detected
2025-10-10 05:18:18 (25320): Setting CPU throttle for VM. (100%)
2025-10-10 05:18:18 (25320): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-10 05:18:20 (25320): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-10 05:18:20 (25320): Guest Log: BIOS: Booting from Hard Disk...
2025-10-10 05:18:23 (25320): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-10 05:18:23 (25320): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-10 05:18:23 (25320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-10 05:18:30 (25320): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-10 05:18:30 (25320): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-10 05:18:43 (25320): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-10 05:18:43 (25320): Guest Log: 00:00:00.000268 main     Log opened 2025-10-10T05:18:41.276604000Z
2025-10-10 05:18:43 (25320): Guest Log: 00:00:00.000481 main     OS Product: Linux
2025-10-10 05:18:43 (25320): Guest Log: 00:00:00.000607 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-10 05:18:43 (25320): Guest Log: 00:00:00.000680 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-10 05:18:43 (25320): Guest Log: 00:00:00.000742 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-10 05:18:43 (25320): Guest Log: 00:00:00.000744 main     Process ID: 1266
2025-10-10 05:18:43 (25320): Guest Log: 00:00:00.000745 main     Package type: LINUX_64BITS_GENERIC
2025-10-10 05:18:43 (25320): Guest Log: 00:00:00.002078 main     5.2.32 r132073 started. Verbose level = 0
2025-10-10 05:18:43 (25320): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-10 05:18:43 (25320): Guest Log: [INFO] Mounting shared directory
2025-10-10 05:18:43 (25320): Guest Log: [INFO] Checking for init_data.xml
2025-10-10 05:18:46 (25320): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-10 05:18:46 (25320): Guest Log: [INFO] Detected branch: prod
2025-10-10 05:18:46 (25320): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-10 05:18:46 (25320): Guest Log: Copying input files
2025-10-10 05:18:48 (25320): Guest Log: Copied input files into RunAtlas.
2025-10-10 05:18:48 (25320): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-10 05:18:48 (25320): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-10 05:18:48 (25320): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-10 05:18:48 (25320): Guest Log: Further information can be found at the LHC@home message board.
2025-10-10 05:18:53 (25320): Guest Log: 00:00:10.006877 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 418 774 000ns (GuestNow=1 760 087 932 699 971 000 ns GuestLast=1 760 073 521 281 197 000 ns fSetTimeLastLoop=true )
2025-10-10 05:19:22 (25320): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-10 05:19:22 (25320): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-10 05:19:22 (25320): Guest Log: 2.6.3.0 1542 0 30076 151541 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-10 05:19:23 (25320): Guest Log: copied the webapp to /var/www
2025-10-10 05:19:23 (25320): Guest Log: ATHENA_PROC_NUMBER=2
2025-10-10 05:19:23 (25320): Guest Log: ATHENA_CORE_NUMBER=2
2025-10-10 05:19:23 (25320): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-10 05:19:23 (25320): Guest Log:  *** Starting ATLAS job. (PandaID=6837398189 taskID=46676269) ***
2025-10-10 07:00:33 (25320): Status Report: Elapsed Time: '6000.244791'
2025-10-10 07:00:33 (25320): Status Report: CPU Time: '11378.125000'
2025-10-10 08:42:40 (25320): Status Report: Elapsed Time: '12000.421844'
2025-10-10 08:42:40 (25320): Status Report: CPU Time: '23352.015625'
2025-10-10 10:24:25 (25320): Status Report: Elapsed Time: '18000.640633'
2025-10-10 10:24:25 (25320): Status Report: CPU Time: '35282.656250'
2025-10-10 12:06:17 (25320): Status Report: Elapsed Time: '24001.583775'
2025-10-10 12:06:17 (25320): Status Report: CPU Time: '47216.656250'
2025-10-10 13:45:52 (25320): Guest Log:  *** Job finished ***
2025-10-10 13:45:52 (25320): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-10 13:45:52 (25320): Guest Log: 2025-10-10 17:45:18,282 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-10 13:45:52 (25320): Guest Log: 2025-10-10 17:45:18,282 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-10 13:45:52 (25320): Guest Log: 2025-10-10 17:45:34,026 | INFO     | [monitor] cgroup control has ended
2025-10-10 13:45:52 (25320): Guest Log: 2025-10-10 17:45:34,263 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140660741265216)>', '<ExcThread(monitor, started 140660287981312)>']
2025-10-10 13:45:52 (25320): Guest Log: 2025-10-10 17:45:34,316 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-10 13:45:52 (25320): Guest Log: 2025-10-10 17:45:34,317 | INFO     | [monitor] control thread has ended
2025-10-10 13:45:52 (25320): Guest Log: 2025-10-10 17:45:39,270 | INFO     | all workflow threads have been joined
2025-10-10 13:45:52 (25320): Guest Log: 2025-10-10 17:45:39,271 | INFO     | end of generic workflow (traces error code: 0)
2025-10-10 13:45:52 (25320): Guest Log: 2025-10-10 17:45:39,271 | INFO     | traces error code: 0
2025-10-10 13:45:52 (25320): Guest Log: 2025-10-10 17:45:39,271 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-10 13:45:52 (25320): Guest Log: 2025-10-10 17:45:39,384 [wrapper] ==== pilot stdout END ====
2025-10-10 13:45:52 (25320): Guest Log: 2025-10-10 17:45:39,389 [wrapper] ==== wrapper stdout RESUME ====
2025-10-10 13:45:52 (25320): Guest Log: 2025-10-10 17:45:39,395 [wrapper] pilotpid: 5913
2025-10-10 13:45:52 (25320): Guest Log: 2025-10-10 17:45:39,402 [wrapper] Pilot exit status: 0
2025-10-10 13:45:52 (25320): Guest Log: 2025-10-10 17:45:39,484 [wrapper] pandaids: 6837398189
2025-10-10 13:45:52 (25320): Guest Log: 2025-10-10 17:45:39,522 [wrapper] cleanup supervisor_pilot  7759 5914
2025-10-10 13:45:52 (25320): Guest Log: 2025-10-10 17:45:39,528 [wrapper] Test setup, not cleaning
2025-10-10 13:45:52 (25320): Guest Log: 2025-10-10 17:45:39,534 [wrapper] apfmon messages muted
2025-10-10 13:45:52 (25320): Guest Log: 2025-10-10 17:45:39,540 [wrapper] ==== wrapper stdout END ====
2025-10-10 13:45:52 (25320): Guest Log: 2025-10-10 17:45:39,546 [wrapper] ==== wrapper stderr END ====
2025-10-10 13:45:52 (25320): Guest Log:  *** Error codes and diagnostics ***
2025-10-10 13:45:52 (25320): Guest Log:     "exeErrorCode": 0,
2025-10-10 13:45:52 (25320): Guest Log:     "exeErrorDiag": "",
2025-10-10 13:45:52 (25320): Guest Log:     "pilotErrorCode": 0,
2025-10-10 13:45:52 (25320): Guest Log:     "pilotErrorDiag": "",
2025-10-10 13:45:52 (25320): Guest Log:  *** Listing of results directory ***
2025-10-10 13:45:52 (25320): Guest Log: total 206668
2025-10-10 13:45:52 (25320): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 10 02:47 queuedata.json
2025-10-10 13:45:52 (25320): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 10 02:47 pilot3.tar.gz
2025-10-10 13:45:52 (25320): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 10 02:48 runpilot2-wrapper.sh
2025-10-10 13:45:52 (25320): Guest Log: -rwxr-xr-x. 1 atlas atlas      8903 Oct 10 09:18 init_data.xml
2025-10-10 13:45:52 (25320): Guest Log: -rwxr-xr-x. 1 atlas atlas    569678 Oct 10 09:18 input.tar.gz
2025-10-10 13:45:52 (25320): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 10 09:18 start_atlas.sh
2025-10-10 13:45:52 (25320): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 10 09:18 EVNT.46676267._001260.pool.root.1 -> /data/./ATLAS.root_0
2025-10-10 13:45:52 (25320): Guest Log: -rw-r--r--. 1 atlas atlas      2547 Oct 10 09:19 pandaJob.out
2025-10-10 13:45:52 (25320): Guest Log: -rw-------. 1 atlas atlas    975511 Oct 10 09:19 agis_schedconf.cvmfs.json
2025-10-10 13:45:52 (25320): Guest Log: drwx------. 5 atlas atlas      4096 Oct 10 09:20 pilot3
2025-10-10 13:45:52 (25320): Guest Log: -rw-------. 1 atlas atlas 198514581 Oct 10 17:43 HITS.46676269._030892.pool.root.1
2025-10-10 13:45:52 (25320): Guest Log: -rw-------. 1 atlas atlas      1030 Oct 10 17:44 memory_monitor_summary.json
2025-10-10 13:45:52 (25320): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 10 17:44 agis_ddmendpoints.agis.ALL.json
2025-10-10 13:45:52 (25320): Guest Log: -rw-------. 1 atlas atlas    567456 Oct 10 17:44 log.46676269._030892.job.log.tgz.1
2025-10-10 13:45:52 (25320): Guest Log: -rw-------. 1 atlas atlas      7824 Oct 10 17:44 heartbeat.json
2025-10-10 13:45:52 (25320): Guest Log: -rw-------. 1 atlas atlas        95 Oct 10 17:45 pilot_heartbeat.json
2025-10-10 13:45:52 (25320): Guest Log: -rw-------. 1 atlas atlas      4805 Oct 10 17:45 pilotlog.txt
2025-10-10 13:45:52 (25320): Guest Log: -rw-------. 1 atlas atlas   4070610 Oct 10 17:45 log.46676269._030892.job.log.1
2025-10-10 13:45:52 (25320): Guest Log: -rw-------. 1 atlas atlas       357 Oct 10 17:45 output.list
2025-10-10 13:45:52 (25320): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 10 17:45 runtime_log
2025-10-10 13:45:52 (25320): Guest Log: -rw-------. 1 atlas atlas   4659200 Oct 10 17:45 result.tar.gz
2025-10-10 13:45:52 (25320): Guest Log: -rw-r--r--. 1 atlas atlas      8658 Oct 10 17:45 runtime_log.err
2025-10-10 13:45:52 (25320): Guest Log: -rw-------. 1 atlas atlas       664 Oct 10 17:45 2N1LDm0LIR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmS5bNDmGPVoJo.diag
2025-10-10 13:45:52 (25320): Guest Log: Looking for outputfile HITS.46676269._030892.pool.root.1
2025-10-10 13:45:52 (25320): Guest Log: HITS file was successfully produced
2025-10-10 13:45:52 (25320): Guest Log: -rw-------. 1 atlas atlas 198514581 Oct 10 17:43 /home/atlas/RunAtlas/HITS.46676269._030892.pool.root.1
2025-10-10 13:45:54 (25320): Guest Log: Successfully finished the ATLAS job!
2025-10-10 13:45:54 (25320): Guest Log: Copying the results back to the shared directory!
2025-10-10 13:45:54 (25320): Guest Log:  *** Contents of shared directory: ***
2025-10-10 13:45:54 (25320): Guest Log: total 414412
2025-10-10 13:45:54 (25320): Guest Log: -rwxrwxrwx. 1 root root 220575263 Oct 10 09:17 ATLAS.root_0
2025-10-10 13:45:54 (25320): Guest Log: -rwxrwxrwx. 1 root root 198514581 Oct 10  2025 HITS.pool.root.1
2025-10-10 13:45:54 (25320): Guest Log: -rwxrwxrwx. 1 root root      8903 Oct 10 09:17 init_data.xml
2025-10-10 13:45:54 (25320): Guest Log: -rwxrwxrwx. 1 root root    569678 Oct 10 08:15 input.tar.gz
2025-10-10 13:45:54 (25320): Guest Log: -rwxrwxrwx. 1 root root   4659200 Oct 10  2025 result.tar.gz
2025-10-10 13:45:54 (25320): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 10 08:15 start_atlas.sh
2025-10-10 13:45:54 (25320): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-10 13:45:54 (25320): VM Completion File Detected.
2025-10-10 13:45:54 (25320): Powering off VM.
2025-10-10 13:45:55 (25320): Successfully stopped VM.
2025-10-10 13:45:55 (25320): Deregistering VM. (boinc_216d49ed5b9cac40, slot#1)
2025-10-10 13:45:55 (25320): Removing network bandwidth throttle group from VM.
2025-10-10 13:45:56 (25320): Removing VM from VirtualBox.
2025-10-10 13:46:01 (25320): called boinc_finish(0)

</stderr_txt>
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