Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
04:13:47 (2505084): wrapper (7.7.26015): starting
04:13:47 (2505084): wrapper: running run_atlas (--nthreads 5)
[2025-10-10 04:13:47] Arguments: --nthreads 5
[2025-10-10 04:13:47] Threads: 5
[2025-10-10 04:13:47] Checking for CVMFS
[2025-10-10 04:13:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 04:13:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 04:13:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 04:13:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 04:13:48] 2.11.0.0 2490241 0 34420 151538 3 79 3687587 4096001 288 130560 0 38871 99.959 2770 10221 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-10 04:13:48] CVMFS is ok
[2025-10-10 04:13:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 04:13:48] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-10 04:13:48] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-10 04:13:48] Further information can be found at the LHC@home message board.
[2025-10-10 04:13:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 04:13:48] Checking for apptainer binary...
[2025-10-10 04:13:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 04:13:48] Running /usr/bin/apptainer --version
[2025-10-10 04:13:48] apptainer version 1.4.3
[2025-10-10 04:13:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 04:13:48] x32-linux4
[2025-10-10 04:13:48] apptainer works
[2025-10-10 04:13:48] Set ATHENA_PROC_NUMBER=5
[2025-10-10 04:13:48] Set ATHENA_CORE_NUMBER=5
[2025-10-10 04:13:48] Starting ATLAS job with PandaID=6837379107
[2025-10-10 04:13:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 06:14:11]  *** The last 200 lines of the pilot log: ***
[2025-10-10 06:14:11] 2025-10-10 10:13:23,780 | INFO     | mean x: 1760087467.0
[2025-10-10 06:14:11] 2025-10-10 10:13:23,780 | INFO     | mean y: 2335785.884955752
[2025-10-10 06:14:11] 2025-10-10 10:13:23,780 | INFO     | -- intersect: -45599653723.52432
[2025-10-10 06:14:11] 2025-10-10 10:13:23,780 | INFO     | intersect: -45599653723.52432
[2025-10-10 06:14:11] 2025-10-10 10:13:23,780 | INFO     | chi2: 1.046859759302847
[2025-10-10 06:14:11] 2025-10-10 10:13:23,780 | INFO     | current chi2=1.046859759302847 (change=43.25985558401846 %)
[2025-10-10 06:14:11] 2025-10-10 10:13:23,781 | INFO     | sum of square deviations: 390582207.0
[2025-10-10 06:14:11] 2025-10-10 10:13:23,781 | INFO     | sum of deviations: 10948894056.499998
[2025-10-10 06:14:11] 2025-10-10 10:13:23,781 | INFO     | mean x: 1760087314.5
[2025-10-10 06:14:11] 2025-10-10 10:13:23,781 | INFO     | mean y: 2334061.046296296
[2025-10-10 06:14:11] 2025-10-10 10:13:23,781 | INFO     | -- intersect: -49336855464.93765
[2025-10-10 06:14:11] 2025-10-10 10:13:23,781 | INFO     | intersect: -49336855464.93765
[2025-10-10 06:14:11] 2025-10-10 10:13:23,781 | INFO     | chi2: 1.0483325280000444
[2025-10-10 06:14:11] 2025-10-10 10:13:23,781 | INFO     | current chi2=1.0483325280000444 (change=-0.1406844311389096 %)
[2025-10-10 06:14:11] 2025-10-10 10:13:23,781 | INFO     | right removable region: 107
[2025-10-10 06:14:11] 2025-10-10 10:13:23,781 | INFO     | sum of square deviations: 447383272.0
[2025-10-10 06:14:11] 2025-10-10 10:13:23,782 | INFO     | sum of deviations: -5177743806.0
[2025-10-10 06:14:11] 2025-10-10 10:13:23,782 | INFO     | mean x: 1760087772.0
[2025-10-10 06:14:11] 2025-10-10 10:13:23,782 | INFO     | mean y: 2342871.681415929
[2025-10-10 06:14:11] 2025-10-10 10:13:23,782 | INFO     | -- intersect: 20372535790.940453
[2025-10-10 06:14:11] 2025-10-10 10:13:23,782 | INFO     | intersect: 20372535790.940453
[2025-10-10 06:14:11] 2025-10-10 10:13:23,782 | INFO     | chi2: 0.8269554314798094
[2025-10-10 06:14:11] 2025-10-10 10:13:23,782 | INFO     | current chi2=0.8269554314798094 (change=55.17874272004495 %)
[2025-10-10 06:14:11] 2025-10-10 10:13:23,782 | INFO     | sum of square deviations: 390582207.0
[2025-10-10 06:14:11] 2025-10-10 10:13:23,783 | INFO     | sum of deviations: -4999673307.5
[2025-10-10 06:14:11] 2025-10-10 10:13:23,783 | INFO     | mean x: 1760087924.5
[2025-10-10 06:14:11] 2025-10-10 10:13:23,783 | INFO     | mean y: 2342408.6203703703
[2025-10-10 06:14:11] 2025-10-10 10:13:23,783 | INFO     | -- intersect: 22532463999.580925
[2025-10-10 06:14:11] 2025-10-10 10:13:23,783 | INFO     | intersect: 22532463999.580925
[2025-10-10 06:14:11] 2025-10-10 10:13:23,783 | INFO     | chi2: 0.8275452234719126
[2025-10-10 06:14:11] 2025-10-10 10:13:23,783 | INFO     | current chi2=0.8275452234719126 (change=-0.07132089223330576 %)
[2025-10-10 06:14:11] 2025-10-10 10:13:23,783 | INFO     | left removable region: 20
[2025-10-10 06:14:11] 2025-10-10 10:13:23,783 | INFO     | sum of square deviations: 204163828.0
[2025-10-10 06:14:11] 2025-10-10 10:13:23,784 | INFO     | sum of deviations: 839673417.9999999
[2025-10-10 06:14:11] 2025-10-10 10:13:23,784 | INFO     | mean x: 1760087894.0
[2025-10-10 06:14:11] 2025-10-10 10:13:23,784 | INFO     | mean y: 2363450.425287356
[2025-10-10 06:14:11] 2025-10-10 10:13:23,784 | INFO     | -- intersect: -7236426262.781899
[2025-10-10 06:14:11] 2025-10-10 10:13:23,784 | INFO     | intersect: -7236426262.781899
[2025-10-10 06:14:11] 2025-10-10 10:13:23,784 | INFO     | chi2: 0.00045547143444198856
[2025-10-10 06:14:11] 2025-10-10 10:13:23,784 | INFO     | -- intersect: -7236426262.781899
[2025-10-10 06:14:11] 2025-10-10 10:13:23,784 | INFO     | current memory leak: 4.11 B/s (using 87 data points, chi2=0.00)
[2025-10-10 06:14:11] 2025-10-10 10:13:23,784 | INFO     | could have reported an average CPU frequency of 3861 MHz (7 samples)
[2025-10-10 06:14:11] 2025-10-10 10:13:23,784 | INFO     | ..............................
[2025-10-10 06:14:11] 2025-10-10 10:13:23,784 | INFO     | . Timing measurements:
[2025-10-10 06:14:11] 2025-10-10 10:13:23,784 | INFO     | . get job = 0 s
[2025-10-10 06:14:11] 2025-10-10 10:13:23,784 | INFO     | . initial setup = 1 s
[2025-10-10 06:14:11] 2025-10-10 10:13:23,785 | INFO     | . payload setup = 2 s
[2025-10-10 06:14:11] 2025-10-10 10:13:23,785 | INFO     | . stage-in = 0 s
[2025-10-10 06:14:11] 2025-10-10 10:13:23,785 | INFO     | . payload execution = 7145 s
[2025-10-10 06:14:11] 2025-10-10 10:13:23,785 | INFO     | . stage-out = 0 s
[2025-10-10 06:14:11] 2025-10-10 10:13:23,785 | INFO     | . log creation = 0 s
[2025-10-10 06:14:11] 2025-10-10 10:13:23,785 | INFO     | ..............................
[2025-10-10 06:14:11] 2025-10-10 10:13:23,862 | INFO     | 
[2025-10-10 06:14:11] 2025-10-10 10:13:23,862 | INFO     | job summary report
[2025-10-10 06:14:11] 2025-10-10 10:13:23,862 | INFO     | --------------------------------------------------
[2025-10-10 06:14:11] 2025-10-10 10:13:23,862 | INFO     | PanDA job id: 6837379107
[2025-10-10 06:14:11] 2025-10-10 10:13:23,862 | INFO     | task id: 46676269
[2025-10-10 06:14:11] 2025-10-10 10:13:23,862 | INFO     | errors: (none)
[2025-10-10 06:14:11] 2025-10-10 10:13:23,862 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 06:14:11] 2025-10-10 10:13:23,862 | INFO     | pilot state: finished 
[2025-10-10 06:14:11] 2025-10-10 10:13:23,862 | INFO     | transexitcode: 0
[2025-10-10 06:14:11] 2025-10-10 10:13:23,862 | INFO     | exeerrorcode: 0
[2025-10-10 06:14:11] 2025-10-10 10:13:23,862 | INFO     | exeerrordiag: 
[2025-10-10 06:14:11] 2025-10-10 10:13:23,862 | INFO     | exitcode: 0
[2025-10-10 06:14:11] 2025-10-10 10:13:23,862 | INFO     | exitmsg: OK
[2025-10-10 06:14:11] 2025-10-10 10:13:23,862 | INFO     | cpuconsumptiontime: 27911 s
[2025-10-10 06:14:11] 2025-10-10 10:13:23,863 | INFO     | nevents: 400
[2025-10-10 06:14:11] 2025-10-10 10:13:23,863 | INFO     | neventsw: 0
[2025-10-10 06:14:11] 2025-10-10 10:13:23,863 | INFO     | pid: 2539506
[2025-10-10 06:14:11] 2025-10-10 10:13:23,863 | INFO     | pgrp: 2539506
[2025-10-10 06:14:11] 2025-10-10 10:13:23,863 | INFO     | corecount: 5
[2025-10-10 06:14:11] 2025-10-10 10:13:23,863 | INFO     | event service: False
[2025-10-10 06:14:11] 2025-10-10 10:13:23,863 | INFO     | sizes: {0: 2348670, 1: 2348869, 3: 2349131, 11: 2349159, 7151: 2376517, 7153: 2385713, 7158: 2385851}
[2025-10-10 06:14:11] 2025-10-10 10:13:23,863 | INFO     | --------------------------------------------------
[2025-10-10 06:14:11] 2025-10-10 10:13:23,863 | INFO     | 
[2025-10-10 06:14:11] 2025-10-10 10:13:23,863 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-10-10 06:14:11] 2025-10-10 10:13:23,874 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 06:14:11] 2025-10-10 10:13:23,875 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 06:14:11] 2025-10-10 10:13:23,875 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 06:14:11] 2025-10-10 10:13:23,875 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 06:14:11] 2025-10-10 10:13:23,875 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 06:14:11] 2025-10-10 10:13:23,875 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 06:14:11] 2025-10-10 10:13:23,875 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 06:14:11] 2025-10-10 10:13:23,875 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 06:14:11] 2025-10-10 10:13:23,875 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 06:14:11] 2025-10-10 10:13:23,875 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 06:14:11] 2025-10-10 10:13:23,875 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 06:14:11] 2025-10-10 10:13:23,875 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 06:14:11] 2025-10-10 10:13:23,875 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 06:14:11] 2025-10-10 10:13:23,875 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 06:14:11] 2025-10-10 10:13:23,875 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 06:14:11] 2025-10-10 10:13:23,875 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 06:14:11] 2025-10-10 10:13:23,875 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 06:14:11] 2025-10-10 10:13:23,875 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 06:14:11] 2025-10-10 10:13:23,875 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 06:14:11] 2025-10-10 10:13:23,875 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 06:14:11] 2025-10-10 10:13:23,875 | INFO     | job 6837379107 has completed (purged errors)
[2025-10-10 06:14:11] 2025-10-10 10:13:23,875 | INFO     | overall cleanup function is called
[2025-10-10 06:14:11] 2025-10-10 10:13:23,948 | WARNING  | process 2539506 can no longer be monitored (due to stat problems) - aborting
[2025-10-10 06:14:11] 2025-10-10 10:13:24,004 | INFO     | using path: /var/lib/boinc-client/slots/2/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 06:14:11] 2025-10-10 10:13:24,004 | INFO     | using path: /var/lib/boinc-client/slots/2/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 06:14:11] 2025-10-10 10:13:24,004 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc-client/slots/2/PanDA_Pilot-6837379107/payload.stdout) since it has not been created yet
[2025-10-10 06:14:11] 2025-10-10 10:13:24,005 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-10-10 06:14:11] 2025-10-10 10:13:24,013 | INFO     | sufficient remaining disk space (147549323264 B)
[2025-10-10 06:14:11] 2025-10-10 10:13:24,013 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-10-10 06:14:11] 2025-10-10 10:13:24,013 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/2/PanDA_Pilot-6837379107/HITS.46676269._030246.pool.root.1 since it does not exist
[2025-10-10 06:14:11] 2025-10-10 10:13:24,092 | INFO     | number of running child processes to parent process 2539506: 1
[2025-10-10 06:14:11] 2025-10-10 10:13:24,093 | INFO     | maximum number of monitored processes: 6
[2025-10-10 06:14:11] 2025-10-10 10:13:24,093 | INFO     | aborting job monitoring since job object (job id=6837379107) has expired
[2025-10-10 06:14:11] 2025-10-10 10:13:24,882 | INFO     | --- collectZombieJob: --- 10, [2539506]
[2025-10-10 06:14:11] 2025-10-10 10:13:24,882 | INFO     | zombie collector waiting for pid 2539506
[2025-10-10 06:14:11] 2025-10-10 10:13:24,882 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 06:14:11] 2025-10-10 10:13:24,882 | INFO     | collected zombie processes
[2025-10-10 06:14:11] 2025-10-10 10:13:24,882 | INFO     | will attempt to kill all subprocesses of pid=2539506
[2025-10-10 06:14:11] 2025-10-10 10:13:24,973 | INFO     | process IDs to be killed: [2539506] (in reverse order)
[2025-10-10 06:14:11] 2025-10-10 10:13:25,007 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 06:14:11] 2025-10-10 10:13:25,008 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 06:14:11] 2025-10-10 10:13:25,011 | INFO     | did not find any defunct processes belonging to 2539506
[2025-10-10 06:14:11] 2025-10-10 10:13:25,015 | INFO     | did not find any defunct processes belonging to 2539506
[2025-10-10 06:14:11] 2025-10-10 10:13:25,015 | INFO     | ready for new job
[2025-10-10 06:14:11] 2025-10-10 10:13:25,015 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 06:14:11] 2025-10-10 10:13:25,016 | INFO     | ***************************************
[2025-10-10 06:14:11] 2025-10-10 10:13:25,016 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-10 06:14:11] 2025-10-10 10:13:25,016 | INFO     | ***************************************
[2025-10-10 06:14:11] 2025-10-10 10:13:25,016 | INFO     | 
[2025-10-10 06:14:11] 2025-10-10 10:13:25,017 | INFO     | architecture information:
[2025-10-10 06:14:11] 2025-10-10 10:13:25,018 | INFO     | executing command: cat /etc/os-release
[2025-10-10 06:14:11] 2025-10-10 10:13:25,026 | INFO     | cat /etc/os-release:
[2025-10-10 06:14:11] NAME="CentOS Linux"
[2025-10-10 06:14:11] VERSION="7 (Core)"
[2025-10-10 06:14:11] ID="centos"
[2025-10-10 06:14:11] ID_LIKE="rhel fedora"
[2025-10-10 06:14:11] VERSION_ID="7"
[2025-10-10 06:14:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 06:14:11] ANSI_COLOR="0;31"
[2025-10-10 06:14:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 06:14:11] HOME_URL="https://www.centos.org/"
[2025-10-10 06:14:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 06:14:11] 
[2025-10-10 06:14:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 06:14:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 06:14:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 06:14:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 06:14:11] 
[2025-10-10 06:14:11] 2025-10-10 10:13:25,026 | INFO     | ***************************************
[2025-10-10 06:14:11] 2025-10-10 10:13:25,529 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-10-10 06:14:11] 2025-10-10 10:13:25,537 | INFO     | sufficient remaining disk space (147529400320 B)
[2025-10-10 06:14:11] 2025-10-10 10:13:25,537 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 06:14:11] 2025-10-10 10:13:25,537 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 06:14:11] 2025-10-10 10:13:25,537 | INFO     | update_server=False
[2025-10-10 06:14:11] 2025-10-10 10:13:25,537 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 06:14:11] 2025-10-10 10:13:25,538 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 06:14:11] 2025-10-10 10:13:25,538 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 06:14:11] 2025-10-10 10:13:25,538 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 06:14:11] 2025-10-10 10:13:25,538 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 06:14:11] 2025-10-10 10:13:25,538 | INFO     | aborting loop
[2025-10-10 06:14:11] 2025-10-10 10:13:25,575 | INFO     | all payload control threads have been joined
[2025-10-10 06:14:11] 2025-10-10 10:13:26,079 | INFO     | all data control threads have been joined
[2025-10-10 06:14:11] 2025-10-10 10:13:26,149 | INFO     | all job control threads have been joined
[2025-10-10 06:14:11] 2025-10-10 10:13:26,543 | INFO     | [job] retrieve thread has finished
[2025-10-10 06:14:11] 2025-10-10 10:13:26,543 | INFO     | [job] job monitor thread has finished
[2025-10-10 06:14:11] 2025-10-10 10:13:26,543 | INFO     | [job] queue monitor thread has finished
[2025-10-10 06:14:11] 2025-10-10 10:13:26,556 | INFO     | [job] validate thread has finished
[2025-10-10 06:14:11] 2025-10-10 10:13:26,577 | INFO     | [payload] control thread has finished
[2025-10-10 06:14:11] 2025-10-10 10:13:26,750 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 06:14:11] 2025-10-10 10:13:26,796 | INFO     | [payload] validate_post thread has finished
[2025-10-10 06:14:11] 2025-10-10 10:13:26,872 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 06:14:11] 2025-10-10 10:13:27,084 | INFO     | [data] control thread has finished
[2025-10-10 06:14:11] 2025-10-10 10:13:27,154 | INFO     | [job] control thread has finished
[2025-10-10 06:14:11] 2025-10-10 10:13:27,189 | INFO     | [payload] failed_post thread has finished
[2025-10-10 06:14:11] 2025-10-10 10:13:27,354 | INFO     | [data] copytool_in thread has finished
[2025-10-10 06:14:11] 2025-10-10 10:13:27,543 | INFO     | [data] copytool_out thread has finished
[2025-10-10 06:14:11] 2025-10-10 10:13:27,740 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 06:14:11] 2025-10-10 10:13:29,543 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 06:14:11] 2025-10-10 10:13:36,526 | INFO     | job.realtimelogging is not enabled
[2025-10-10 06:14:11] 2025-10-10 10:13:37,531 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 06:14:11] 2025-10-10 10:13:51,665 [wrapper] supervise_pilot (15 min periods counter: 9)
[2025-10-10 06:14:11] 2025-10-10 10:13:56,114 | INFO     | PID=2517721 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 06:14:11] 2025-10-10 10:13:56,114 | INFO     | .. there are 7 such processes running
[2025-10-10 06:14:11] 2025-10-10 10:13:56,114 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 06:14:11] 2025-10-10 10:13:56,114 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 06:14:11] 2025-10-10 10:13:56,115 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 06:14:11] 2025-10-10 10:14:05,055 | INFO     | [monitor] cgroup control has ended
[2025-10-10 06:14:11] 2025-10-10 10:14:06,087 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126862069929792)>', '<ExcThread(monitor, started 126861581477632)>']
[2025-10-10 06:14:11] 2025-10-10 10:14:06,162 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 06:14:11] 2025-10-10 10:14:06,162 | INFO     | [monitor] control thread has ended
[2025-10-10 06:14:11] 2025-10-10 10:14:11,113 | INFO     | all workflow threads have been joined
[2025-10-10 06:14:11] 2025-10-10 10:14:11,113 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 06:14:11] 2025-10-10 10:14:11,113 | INFO     | traces error code: 0
[2025-10-10 06:14:11] 2025-10-10 10:14:11,113 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 06:14:11] 2025-10-10 10:14:11,164 [wrapper] ==== pilot stdout END ====
[2025-10-10 06:14:11] 2025-10-10 10:14:11,166 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 06:14:11] 2025-10-10 10:14:11,167 [wrapper] pilotpid: 2517721
[2025-10-10 06:14:11] 2025-10-10 10:14:11,168 [wrapper] Pilot exit status: 0
[2025-10-10 06:14:11] 2025-10-10 10:14:11,173 [wrapper] pandaids: 6837379107
[2025-10-10 06:14:11] 2025-10-10 10:14:11,191 [wrapper] cleanup supervisor_pilot 2747067 2517722
[2025-10-10 06:14:11] 2025-10-10 10:14:11,193 [wrapper] Test setup, not cleaning
[2025-10-10 06:14:11] 2025-10-10 10:14:11,194 [wrapper] apfmon messages muted
[2025-10-10 06:14:11] 2025-10-10 10:14:11,195 [wrapper] ==== wrapper stdout END ====
[2025-10-10 06:14:11] 2025-10-10 10:14:11,197 [wrapper] ==== wrapper stderr END ====
[2025-10-10 06:14:11]  *** Error codes and diagnostics ***
[2025-10-10 06:14:11]     "exeErrorCode": 0,
[2025-10-10 06:14:11]     "exeErrorDiag": "",
[2025-10-10 06:14:11]     "pilotErrorCode": 0,
[2025-10-10 06:14:11]     "pilotErrorDiag": "",
[2025-10-10 06:14:11]  *** Listing of results directory ***
[2025-10-10 06:14:11] total 410516
[2025-10-10 06:14:11] -rw-r--r-- 1 boinc boinc    563267 Oct  7 03:02 pilot3.tar.gz
[2025-10-10 06:14:11] -rw-r--r-- 1 boinc boinc      5112 Oct  9 21:55 queuedata.json
[2025-10-10 06:14:11] -rwx------ 1 boinc boinc     36292 Oct  9 21:56 runpilot2-wrapper.sh
[2025-10-10 06:14:11] -rw-r--r-- 1 boinc boinc       100 Oct 10 04:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 06:14:11] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 04:13 run_atlas
[2025-10-10 06:14:11] -rw-r--r-- 1 boinc boinc       105 Oct 10 04:13 job.xml
[2025-10-10 06:14:11] -rw-r--r-- 2 boinc boinc     15120 Oct 10 04:13 start_atlas.sh
[2025-10-10 06:14:11] drwxrwx--x 2 boinc boinc      4096 Oct 10 04:13 shared
[2025-10-10 06:14:11] -rw-r--r-- 2 boinc boinc    576709 Oct 10 04:13 input.tar.gz
[2025-10-10 06:14:11] -rw-r--r-- 1 boinc boinc      9723 Oct 10 04:13 init_data.xml
[2025-10-10 06:14:11] -rw-r--r-- 2 boinc boinc 219750466 Oct 10 04:13 EVNT.46676267._001234.pool.root.1
[2025-10-10 06:14:11] -rw-r--r-- 1 boinc boinc         0 Oct 10 04:13 boinc_setup_complete
[2025-10-10 06:14:11] -rw-r--r-- 1 boinc boinc         0 Oct 10 04:13 boinc_lockfile
[2025-10-10 06:14:11] -rw-r--r-- 1 boinc boinc      2549 Oct 10 04:13 pandaJob.out
[2025-10-10 06:14:11] -rw------- 1 boinc boinc    975454 Oct 10 04:13 agis_schedconf.cvmfs.json
[2025-10-10 06:14:11] -rw------- 1 boinc boinc   1560580 Oct 10 04:13 agis_ddmendpoints.agis.ALL.json
[2025-10-10 06:14:11] drwx------ 4 boinc boinc      4096 Oct 10 04:13 pilot3
[2025-10-10 06:14:11] -rw------- 1 boinc boinc 194006744 Oct 10 06:12 HITS.46676269._030246.pool.root.1
[2025-10-10 06:14:11] -rw-r--r-- 1 boinc boinc       529 Oct 10 06:13 boinc_task_state.xml
[2025-10-10 06:14:11] -rw------- 1 boinc boinc      1021 Oct 10 06:13 memory_monitor_summary.json
[2025-10-10 06:14:11] -rw------- 1 boinc boinc    309328 Oct 10 06:13 log.46676269._030246.job.log.tgz.1
[2025-10-10 06:14:11] -rw------- 1 boinc boinc      7732 Oct 10 06:13 heartbeat.json
[2025-10-10 06:14:11] -rw-r--r-- 1 boinc boinc      8192 Oct 10 06:13 boinc_mmap_file
[2025-10-10 06:14:11] -rw-r--r-- 1 boinc boinc        27 Oct 10 06:13 wrapper_checkpoint.txt
[2025-10-10 06:14:11] -rw------- 1 boinc boinc        95 Oct 10 06:13 pilot_heartbeat.json
[2025-10-10 06:14:11] -rw------- 1 boinc boinc      4903 Oct 10 06:14 pilotlog.txt
[2025-10-10 06:14:11] -rw------- 1 boinc boinc   1037106 Oct 10 06:14 log.46676269._030246.job.log.1
[2025-10-10 06:14:11] -rw------- 1 boinc boinc       357 Oct 10 06:14 output.list
[2025-10-10 06:14:11] -rw-r--r-- 1 boinc boinc       620 Oct 10 06:14 runtime_log
[2025-10-10 06:14:11] -rw------- 1 boinc boinc   1361920 Oct 10 06:14 result.tar.gz
[2025-10-10 06:14:11] -rw-r--r-- 1 boinc boinc      8764 Oct 10 06:14 runtime_log.err
[2025-10-10 06:14:11] -rw------- 1 boinc boinc       643 Oct 10 06:14 paGODmoXHR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtybNDmmkIRGo.diag
[2025-10-10 06:14:11] -rw-r--r-- 1 boinc boinc     21487 Oct 10 06:14 stderr.txt
[2025-10-10 06:14:11] HITS file was successfully produced:
[2025-10-10 06:14:11] -rw------- 1 boinc boinc 194006744 Oct 10 06:12 shared/HITS.pool.root.1
[2025-10-10 06:14:11]  *** Contents of shared directory: ***
[2025-10-10 06:14:11] total 405984
[2025-10-10 06:14:11] -rw-r--r-- 2 boinc boinc     15120 Oct 10 04:13 start_atlas.sh
[2025-10-10 06:14:11] -rw-r--r-- 2 boinc boinc    576709 Oct 10 04:13 input.tar.gz
[2025-10-10 06:14:11] -rw-r--r-- 2 boinc boinc 219750466 Oct 10 04:13 ATLAS.root_0
[2025-10-10 06:14:11] -rw------- 1 boinc boinc 194006744 Oct 10 06:12 HITS.pool.root.1
[2025-10-10 06:14:11] -rw------- 1 boinc boinc   1361920 Oct 10 06:14 result.tar.gz
06:14:12 (2505084): run_atlas exited; CPU time 28012.192565
06:14:12 (2505084): called boinc_finish(0)

</stderr_txt>
]]>

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