Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:28:31 (231385): wrapper (7.7.26015): starting
01:28:31 (231385): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 01:28:31] Arguments: --nthreads 12
[2025-10-10 01:28:31] Threads: 12
[2025-10-10 01:28:31] Checking for CVMFS
[2025-10-10 01:28:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 01:28:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 01:28:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 01:28:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 01:28:32] 2.11.5.0 2096 26799 242440 151539 0 402 34238520 45568001 21062 130560 0 272149613 99.870 116493689 25180 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-10-10 01:28:32] CVMFS is ok
[2025-10-10 01:28:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 01:28:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 01:28:32] Further information can be found at the LHC@home message board.
[2025-10-10 01:28:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 01:28:32] Checking for apptainer binary...
[2025-10-10 01:28:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 01:28:32] Running /usr/bin/apptainer --version
[2025-10-10 01:28:32] apptainer version 1.4.1-1.el9
[2025-10-10 01:28:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 01:28:32] wns0053.triumf.lcg
[2025-10-10 01:28:32] apptainer works
[2025-10-10 01:28:32] Set ATHENA_PROC_NUMBER=12
[2025-10-10 01:28:32] Set ATHENA_CORE_NUMBER=12
[2025-10-10 01:28:32] Starting ATLAS job with PandaID=6837449545
[2025-10-10 01:28:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 01:34:14]  *** The last 200 lines of the pilot log: ***
[2025-10-10 01:34:14] 2025-10-10 08:33:21,426 | WARNING  | wrong length of table data, x=[1760085033.0], y=[2066.0] (must be same and length>=4)
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | could have reported an average CPU frequency of 2694 MHz (4 samples)
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | ..............................
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | . Timing measurements:
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | . get job = 0 s
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | . initial setup = 3 s
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | . payload setup = 21 s
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | . stage-in = 0 s
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | . payload execution = 48 s
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | . stage-out = 1 s
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | . log creation = 0 s
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | ..............................
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 01:34:14] 2025-10-10 08:33:21,428 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837449545/pilotlog.txt
[2025-10-10 01:34:14] 2025-10-10 08:33:21,444 | INFO     | time since job start (254s) is within the limit (172800.0s)
[2025-10-10 01:34:14] 2025-10-10 08:33:21,453 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-10 01:34:14] - Log from pilotlog.txt -
[2025-10-10 01:34:14] 2025-10-10 08:33:21,417 | INFO     | extracted standard info from prmon json
[2025-10-10 01:34:14] 2025-10-10 08:33:21,424 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 01:34:14] 2025-10-10 08:33:21,424 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 01:34:14] 2025-10-10 08:33:21,426 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 01:34:14] 2025-10-10 08:33:21,426 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 01:34:14] 2025-10-10 08:33:21,426 | WARNING  | wrong length of table data, x=[1760085033.0], y=[2066.0] (must be same and length>=4)
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | could have reported an average CPU frequency of 2694 MHz (4 samples)
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | ..............................
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | . Timing measurements:
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | . get job = 0 s
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | . initial setup = 3 s
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | . payload setup = 21 s
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | . stage-in = 0 s
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | . payload execution = 48 s
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | . stage-out = 1 s
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | . log creation = 0 s
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | ..............................
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 01:34:14] 2025-10-10 08:33:21,428 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837449545/pilotlog.txt
[2025-10-10 01:34:14] 2025-10-10 08:33:21,444 | INFO     | time since job start (254s) is within the limit (172800.0s)
[2025-10-10 01:34:14] 2025-10-10 08:33:21,453 | WARNING  | 
[2025-10-10 01:34:14] [begin log extracts]
[2025-10-10 01:34:14] - Log from pilotlog.txt -
[2025-10-10 01:34:14] 2025-10-10 08:33:21,417 | INFO     | extracted standard info from prmon json
[2025-10-10 01:34:14] 2025-10-10 08:33:21,424 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 01:34:14] 2025-10-10 08:33:21,424 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 01:34:14] 2025-10-10 08:33:21,426 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 01:34:14] 2025-10-10 08:33:21,426 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 01:34:14] 2025-10-10 08:33:21,426 | WARNING  | wrong length of table data, x=[1760085033.0], y=[2066.0] (must be same and length>=4)
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | could have reported an average CPU frequency of 2694 MHz (4 samples)
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | ..............................
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | . Timing measurements:
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | . get job = 0 s
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | . initial setup = 3 s
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | . payload setup = 21 s
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | . stage-in = 0 s
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | . payload execution = 48 s
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | . stage-out = 1 s
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | . log creation = 0 s
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | ..............................
[2025-10-10 01:34:14] 2025-10-10 08:33:21,427 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 01:34:14] 2025-10-10 08:33:21,428 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837449545/pilotlog.txt
[2025-10-10 01:34:14] 2025-10-10 08:33:21,444 | INFO     | time since job start (254s) is within the limit (172800.0s)
[2025-10-10 01:34:14] [end log extracts]
[2025-10-10 01:34:14] 2025-10-10 08:33:21,453 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-10 01:34:14] 2025-10-10 08:33:21,456 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-10 01:34:14] 2025-10-10 08:33:22,140 | INFO     | 
[2025-10-10 01:34:14] 2025-10-10 08:33:22,140 | INFO     | job summary report
[2025-10-10 01:34:14] 2025-10-10 08:33:22,140 | INFO     | --------------------------------------------------
[2025-10-10 01:34:14] 2025-10-10 08:33:22,140 | INFO     | PanDA job id: 6837449545
[2025-10-10 01:34:14] 2025-10-10 08:33:22,140 | INFO     | task id: 46676269
[2025-10-10 01:34:14] 2025-10-10 08:33:22,140 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-10 01:30:52,170 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-10 01:34:14] 2025-10-10 08:33:22,140 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 01:34:14] 2025-10-10 08:33:22,140 | INFO     | pilot state: failed 
[2025-10-10 01:34:14] 2025-10-10 08:33:22,141 | INFO     | transexitcode: 65
[2025-10-10 01:34:14] 2025-10-10 08:33:22,141 | INFO     | exeerrorcode: 65
[2025-10-10 01:34:14] 2025-10-10 08:33:22,141 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-10 01:34:14] 2025-10-10 08:33:22,141 | INFO     | exitcode: 65
[2025-10-10 01:34:14] 2025-10-10 08:33:22,141 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-10 01:34:14] 2025-10-10 08:33:22,141 | INFO     | cpuconsumptiontime: 17 s
[2025-10-10 01:34:14] 2025-10-10 08:33:22,141 | INFO     | nevents: 0
[2025-10-10 01:34:14] 2025-10-10 08:33:22,141 | INFO     | neventsw: 0
[2025-10-10 01:34:14] 2025-10-10 08:33:22,141 | INFO     | pid: 242089
[2025-10-10 01:34:14] 2025-10-10 08:33:22,141 | INFO     | pgrp: 242089
[2025-10-10 01:34:14] 2025-10-10 08:33:22,141 | INFO     | corecount: 12
[2025-10-10 01:34:14] 2025-10-10 08:33:22,141 | INFO     | event service: False
[2025-10-10 01:34:14] 2025-10-10 08:33:22,141 | INFO     | sizes: {0: 2348627, 1: 2348711, 2: 2348910, 3: 2348910, 13: 2348938, 23: 2349256, 24: 2349412, 74: 2372817, 76: 2377109, 78: 2377165, 213: 2377359}
[2025-10-10 01:34:14] 2025-10-10 08:33:22,141 | INFO     | --------------------------------------------------
[2025-10-10 01:34:14] 2025-10-10 08:33:22,141 | INFO     | 
[2025-10-10 01:34:14] 2025-10-10 08:33:22,141 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-10 01:34:14] 2025-10-10 08:33:22,306 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 01:34:14] 2025-10-10 08:33:22,307 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 01:34:14] 2025-10-10 08:33:22,307 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 01:34:14] 2025-10-10 08:33:22,307 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 01:34:14] 2025-10-10 08:33:22,307 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 01:34:14] 2025-10-10 08:33:22,307 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 01:34:14] 2025-10-10 08:33:22,307 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 01:34:14] 2025-10-10 08:33:22,307 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 01:34:14] 2025-10-10 08:33:22,307 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 01:34:14] 2025-10-10 08:33:22,307 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 01:34:14] 2025-10-10 08:33:22,307 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 01:34:14] 2025-10-10 08:33:22,307 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 01:34:14] 2025-10-10 08:33:22,307 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 01:34:14] 2025-10-10 08:33:22,307 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 01:34:14] 2025-10-10 08:33:22,307 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 01:34:14] 2025-10-10 08:33:22,307 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 01:34:14] 2025-10-10 08:33:22,307 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 01:34:14] 2025-10-10 08:33:22,307 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 01:34:14] 2025-10-10 08:33:22,307 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 01:34:14] 2025-10-10 08:33:22,307 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 01:34:14] 2025-10-10 08:33:22,308 | INFO     | job 6837449545 has completed (purged errors)
[2025-10-10 01:34:14] 2025-10-10 08:33:22,308 | INFO     | overall cleanup function is called
[2025-10-10 01:34:14] 2025-10-10 08:33:23,314 | INFO     | --- collectZombieJob: --- 10, [242089]
[2025-10-10 01:34:14] 2025-10-10 08:33:23,314 | INFO     | zombie collector waiting for pid 242089
[2025-10-10 01:34:14] 2025-10-10 08:33:23,314 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 01:34:14] 2025-10-10 08:33:23,314 | INFO     | collected zombie processes
[2025-10-10 01:34:14] 2025-10-10 08:33:23,314 | INFO     | will attempt to kill all subprocesses of pid=242089
[2025-10-10 01:34:14] 2025-10-10 08:33:23,703 | INFO     | process IDs to be killed: [242089] (in reverse order)
[2025-10-10 01:34:14] 2025-10-10 08:33:23,952 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 01:34:14] 2025-10-10 08:33:23,952 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 01:34:14] 2025-10-10 08:33:23,984 | INFO     | did not find any defunct processes belonging to 242089
[2025-10-10 01:34:14] 2025-10-10 08:33:23,998 | INFO     | did not find any defunct processes belonging to 242089
[2025-10-10 01:34:14] 2025-10-10 08:33:23,998 | INFO     | ready for new job
[2025-10-10 01:34:14] 2025-10-10 08:33:23,998 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 01:34:14] 2025-10-10 08:33:23,999 | INFO     | ***************************************
[2025-10-10 01:34:14] 2025-10-10 08:33:24,000 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 01:34:14] 2025-10-10 08:33:24,000 | INFO     | ***************************************
[2025-10-10 01:34:14] 2025-10-10 08:33:24,000 | INFO     | 
[2025-10-10 01:34:14] 2025-10-10 08:33:24,005 | INFO     | architecture information:
[2025-10-10 01:34:14] 2025-10-10 08:33:24,007 | INFO     | executing command: cat /etc/os-release
[2025-10-10 01:34:14] 2025-10-10 08:33:24,027 | INFO     | cat /etc/os-release:
[2025-10-10 01:34:14] NAME="CentOS Linux"
[2025-10-10 01:34:14] VERSION="7 (Core)"
[2025-10-10 01:34:14] ID="centos"
[2025-10-10 01:34:14] ID_LIKE="rhel fedora"
[2025-10-10 01:34:14] VERSION_ID="7"
[2025-10-10 01:34:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 01:34:14] ANSI_COLOR="0;31"
[2025-10-10 01:34:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 01:34:14] HOME_URL="https://www.centos.org/"
[2025-10-10 01:34:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 01:34:14] 
[2025-10-10 01:34:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 01:34:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 01:34:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 01:34:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 01:34:14] 
[2025-10-10 01:34:14] 2025-10-10 08:33:24,041 | INFO     | ***************************************
[2025-10-10 01:34:14] 2025-10-10 08:33:24,548 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-10 01:34:14] 2025-10-10 08:33:24,606 | INFO     | sufficient remaining disk space (1539151233024 B)
[2025-10-10 01:34:14] 2025-10-10 08:33:24,607 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 01:34:14] 2025-10-10 08:33:24,607 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 01:34:14] 2025-10-10 08:33:24,607 | INFO     | update_server=False
[2025-10-10 01:34:14] 2025-10-10 08:33:24,607 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 01:34:14] 2025-10-10 08:33:24,713 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 01:34:14] 2025-10-10 08:33:24,713 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 01:34:14] 2025-10-10 08:33:24,713 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 01:34:14] 2025-10-10 08:33:24,713 | INFO     | will abort loop
[2025-10-10 01:34:14] 2025-10-10 08:33:24,850 | INFO     | all payload control threads have been joined
[2025-10-10 01:34:14] 2025-10-10 08:33:25,075 | INFO     | all job control threads have been joined
[2025-10-10 01:34:14] 2025-10-10 08:33:25,170 | INFO     | all data control threads have been joined
[2025-10-10 01:34:14] 2025-10-10 08:33:25,620 | INFO     | [job] retrieve thread has finished
[2025-10-10 01:34:14] 2025-10-10 08:33:25,719 | INFO     | [job] job monitor thread has finished
[2025-10-10 01:34:14] 2025-10-10 08:33:25,776 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 01:34:14] 2025-10-10 08:33:25,816 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 01:34:14] 2025-10-10 08:33:25,835 | INFO     | [payload] failed_post thread has finished
[2025-10-10 01:34:14] 2025-10-10 08:33:25,856 | INFO     | [payload] control thread has finished
[2025-10-10 01:34:14] 2025-10-10 08:33:25,957 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 01:34:14] 2025-10-10 08:33:26,091 | INFO     | [job] control thread has finished
[2025-10-10 01:34:14] 2025-10-10 08:33:26,176 | INFO     | [data] control thread has finished
[2025-10-10 01:34:14] 2025-10-10 08:33:26,422 | INFO     | [data] copytool_in thread has finished
[2025-10-10 01:34:14] 2025-10-10 08:33:26,466 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 01:34:14] 2025-10-10 08:33:26,535 | INFO     | [job] validate thread has finished
[2025-10-10 01:34:14] 2025-10-10 08:33:26,785 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 01:34:14] 2025-10-10 08:33:26,813 | INFO     | [payload] validate_post thread has finished
[2025-10-10 01:34:14] 2025-10-10 08:33:26,970 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 01:34:14] 2025-10-10 08:33:27,791 | INFO     | [job] queue monitor thread has finished
[2025-10-10 01:34:14] 2025-10-10 08:33:27,964 | INFO     | [data] copytool_out thread has finished
[2025-10-10 01:34:14] 2025-10-10 08:33:28,066 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 01:34:14] 2025-10-10 08:33:32,078 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 01:34:14] 2025-10-10 08:33:55,521 | INFO     | PID=235178 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 01:34:14] 2025-10-10 08:33:55,521 | INFO     | .. there are 42 such processes running
[2025-10-10 01:34:14] 2025-10-10 08:33:55,521 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 01:34:14] 2025-10-10 08:33:55,521 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 01:34:14] 2025-10-10 08:33:55,521 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 01:34:14] 2025-10-10 08:34:06,876 | INFO     | [monitor] cgroup control has ended
[2025-10-10 01:34:14] 2025-10-10 08:34:08,089 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140242010224448)>', '<ExcThread(monitor, started 140240882759424)>']
[2025-10-10 01:34:14] 2025-10-10 08:34:08,621 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 01:34:14] 2025-10-10 08:34:08,621 | INFO     | [monitor] control thread has ended
[2025-10-10 01:34:14] 2025-10-10 08:34:13,115 | INFO     | all workflow threads have been joined
[2025-10-10 01:34:14] 2025-10-10 08:34:13,115 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 01:34:14] 2025-10-10 08:34:13,115 | INFO     | traces error code: 0
[2025-10-10 01:34:14] 2025-10-10 08:34:13,116 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 01:34:14] 2025-10-10 08:34:13,554 [wrapper] ==== pilot stdout END ====
[2025-10-10 01:34:14] 2025-10-10 08:34:13,558 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 01:34:14] 2025-10-10 08:34:13,562 [wrapper] pilotpid: 235178
[2025-10-10 01:34:14] 2025-10-10 08:34:13,612 [wrapper] Pilot exit status: 0
[2025-10-10 01:34:14] 2025-10-10 08:34:13,703 [wrapper] pandaids: 6837449545
[2025-10-10 01:34:14] 2025-10-10 08:34:13,934 [wrapper] cleanup supervisor_pilot  235184 235179
[2025-10-10 01:34:14] 2025-10-10 08:34:13,943 [wrapper] Test setup, not cleaning
[2025-10-10 01:34:14] 2025-10-10 08:34:13,945 [wrapper] apfmon messages muted
[2025-10-10 01:34:14] 2025-10-10 08:34:13,947 [wrapper] ==== wrapper stdout END ====
[2025-10-10 01:34:14] 2025-10-10 08:34:13,949 [wrapper] ==== wrapper stderr END ====
[2025-10-10 01:34:14]  *** Error codes and diagnostics ***
[2025-10-10 01:34:14]     "exeErrorCode": 65,
[2025-10-10 01:34:14]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-10 01:34:14]     "pilotErrorCode": 1305,
[2025-10-10 01:34:14]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-10 01:34:14]  *** Listing of results directory ***
[2025-10-10 01:34:14] total 221536
[2025-10-10 01:34:14] -rw-r--r--. 1 boinc boinc    557409 Oct  9 22:14 pilot3.tar.gz
[2025-10-10 01:34:14] -rw-r--r--. 1 boinc boinc      5112 Oct  9 22:32 queuedata.json
[2025-10-10 01:34:14] -rwx------. 1 boinc boinc     36292 Oct  9 22:32 runpilot2-wrapper.sh
[2025-10-10 01:34:14] -rw-r--r--. 1 boinc boinc       100 Oct 10 01:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 01:34:14] -rwxr-xr-x. 1 boinc boinc      7986 Oct 10 01:28 run_atlas
[2025-10-10 01:34:14] -rw-r--r--. 1 boinc boinc       105 Oct 10 01:28 job.xml
[2025-10-10 01:34:14] -rw-r--r--. 1 boinc boinc      6593 Oct 10 01:28 init_data.xml
[2025-10-10 01:34:14] -rw-r--r--. 2 boinc boinc 222723519 Oct 10 01:28 EVNT.46676267._001348.pool.root.1
[2025-10-10 01:34:14] -rw-r--r--. 2 boinc boinc     15120 Oct 10 01:28 start_atlas.sh
[2025-10-10 01:34:14] drwxrwx--x. 2 boinc boinc      4096 Oct 10 01:28 shared
[2025-10-10 01:34:14] -rw-r--r--. 2 boinc boinc    569680 Oct 10 01:28 input.tar.gz
[2025-10-10 01:34:14] -rw-r--r--. 1 boinc boinc         0 Oct 10 01:28 boinc_lockfile
[2025-10-10 01:34:14] -rw-r--r--. 1 boinc boinc      2550 Oct 10 01:28 pandaJob.out
[2025-10-10 01:34:14] -rw-------. 1 boinc boinc    975462 Oct 10 01:29 agis_schedconf.cvmfs.json
[2025-10-10 01:34:14] -rw-------. 1 boinc boinc   1560580 Oct 10 01:29 agis_ddmendpoints.agis.ALL.json
[2025-10-10 01:34:14] drwx------. 5 boinc boinc      4096 Oct 10 01:29 pilot3
[2025-10-10 01:34:14] -rw-------. 1 boinc boinc       961 Oct 10 01:30 memory_monitor_summary.json
[2025-10-10 01:34:14] -rw-------. 1 boinc boinc     22013 Oct 10 01:31 log.46676269._033106.job.log.tgz.1
[2025-10-10 01:34:14] -rw-------. 1 boinc boinc        95 Oct 10 01:33 pilot_heartbeat.json
[2025-10-10 01:34:14] -rw-------. 1 boinc boinc      8405 Oct 10 01:33 heartbeat.json
[2025-10-10 01:34:14] -rw-r--r--. 1 boinc boinc       524 Oct 10 01:34 boinc_task_state.xml
[2025-10-10 01:34:14] -rw-r--r--. 1 boinc boinc        22 Oct 10 01:34 wrapper_checkpoint.txt
[2025-10-10 01:34:14] -rw-------. 1 boinc boinc      5008 Oct 10 01:34 pilotlog.txt
[2025-10-10 01:34:14] -rw-------. 1 boinc boinc     93538 Oct 10 01:34 log.46676269._033106.job.log.1
[2025-10-10 01:34:14] -rw-------. 1 boinc boinc       188 Oct 10 01:34 output.list
[2025-10-10 01:34:14] -rw-r--r--. 1 boinc boinc       620 Oct 10 01:34 runtime_log
[2025-10-10 01:34:14] -rw-------. 1 boinc boinc    133120 Oct 10 01:34 result.tar.gz
[2025-10-10 01:34:14] -rw-r--r--. 1 boinc boinc      8528 Oct 10 01:34 runtime_log.err
[2025-10-10 01:34:14] -rw-------. 1 boinc boinc       644 Oct 10 01:34 rqNODmGvKR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjOPMDm26wh2n.diag
[2025-10-10 01:34:14] -rw-r--r--. 1 boinc boinc      8192 Oct 10 01:34 boinc_mmap_file
[2025-10-10 01:34:14] -rw-r--r--. 1 boinc boinc     21783 Oct 10 01:34 stderr.txt
[2025-10-10 01:34:14] No HITS result produced
[2025-10-10 01:34:14]  *** Contents of shared directory: ***
[2025-10-10 01:34:14] total 218212
[2025-10-10 01:34:14] -rw-r--r--. 2 boinc boinc 222723519 Oct 10 01:28 ATLAS.root_0
[2025-10-10 01:34:14] -rw-r--r--. 2 boinc boinc     15120 Oct 10 01:28 start_atlas.sh
[2025-10-10 01:34:14] -rw-r--r--. 2 boinc boinc    569680 Oct 10 01:28 input.tar.gz
[2025-10-10 01:34:14] -rw-------. 1 boinc boinc    133120 Oct 10 01:34 result.tar.gz
01:34:16 (231385): run_atlas exited; CPU time 29.662535
01:34:16 (231385): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN