Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:09:41 (1307910): wrapper (7.7.26015): starting
04:09:41 (1307910): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 04:09:41] Arguments: --nthreads 8
[2025-10-10 04:09:41] Threads: 8
[2025-10-10 04:09:41] Checking for CVMFS
[2025-10-10 04:09:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 04:09:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 04:09:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 04:09:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 04:09:42] 2.13.2.0 1459556 641 122244 151538 2 882 32033296 40960001 36171 16776704 0 6821636 99.787 4054338 33620 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 04:09:42] CVMFS is ok
[2025-10-10 04:09:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 04:09:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 04:09:42] Further information can be found at the LHC@home message board.
[2025-10-10 04:09:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 04:09:42] Checking for apptainer binary...
[2025-10-10 04:09:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 04:09:42] Running /usr/bin/apptainer --version
[2025-10-10 04:09:42] apptainer version 1.4.3-1.el9
[2025-10-10 04:09:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 04:09:42] c8-16-1.aglt2.org
[2025-10-10 04:09:42] apptainer works
[2025-10-10 04:09:42] Set ATHENA_PROC_NUMBER=8
[2025-10-10 04:09:42] Set ATHENA_CORE_NUMBER=8
[2025-10-10 04:09:42] Starting ATLAS job with PandaID=6837350278
[2025-10-10 04:09:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 05:50:33]  *** The last 200 lines of the pilot log: ***
[2025-10-10 05:50:33] 2025-10-10 09:49:15,380 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 05:50:33] 2025-10-10 09:49:15,862 | INFO     | PID=1316168 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-10 05:50:33] 2025-10-10 09:49:15,862 | INFO     | .. there are 36 such processes running
[2025-10-10 05:50:33] 2025-10-10 09:49:15,898 | INFO     | job 6837350278 has state=finished
[2025-10-10 05:50:33] 2025-10-10 09:49:15,899 | INFO     | preparing for final server update for job 6837350278 in state='finished'
[2025-10-10 05:50:33] 2025-10-10 09:49:15,899 | INFO     | this job has now completed (state=finished)
[2025-10-10 05:50:33] 2025-10-10 09:49:15,899 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 05:50:33] 2025-10-10 09:49:15,899 | INFO     | log transfer has been attempted: DONE
[2025-10-10 05:50:33] 2025-10-10 09:49:15,899 | INFO     | job 6837350278 has finished - writing final server update
[2025-10-10 05:50:33] 2025-10-10 09:49:15,899 | INFO     | total number of processed events: 400 (read)
[2025-10-10 05:50:33] 2025-10-10 09:49:15,907 | INFO     | executing command: lscpu
[2025-10-10 05:50:33] 2025-10-10 09:49:16,000 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 05:50:33] 2025-10-10 09:49:16,863 | INFO     | time since job start (5944s) is within the limit (172800.0s)
[2025-10-10 05:50:33] 2025-10-10 09:49:17,884 | INFO     | monitor loop #392: job 0:6837350278 is in state 'finished'
[2025-10-10 05:50:33] 2025-10-10 09:49:17,885 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 05:50:33] 2025-10-10 09:49:18,870 | INFO     | time since job start (5946s) is within the limit (172800.0s)
[2025-10-10 05:50:33] 2025-10-10 09:49:20,404 | INFO     | monitor loop #393: job 0:6837350278 is in state 'finished'
[2025-10-10 05:50:33] 2025-10-10 09:49:20,405 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 05:50:33] 2025-10-10 09:49:20,877 | INFO     | time since job start (5948s) is within the limit (172800.0s)
[2025-10-10 05:50:33] 2025-10-10 09:49:22,888 | INFO     | time since job start (5950s) is within the limit (172800.0s)
[2025-10-10 05:50:33] 2025-10-10 09:49:22,929 | INFO     | monitor loop #394: job 0:6837350278 is in state 'finished'
[2025-10-10 05:50:33] 2025-10-10 09:49:22,930 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 05:50:33] 2025-10-10 09:49:24,896 | INFO     | time since job start (5952s) is within the limit (172800.0s)
[2025-10-10 05:50:33] 2025-10-10 09:49:25,464 | INFO     | monitor loop #395: job 0:6837350278 is in state 'finished'
[2025-10-10 05:50:33] 2025-10-10 09:49:25,465 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 05:50:33] 2025-10-10 09:49:26,910 | INFO     | time since job start (5954s) is within the limit (172800.0s)
[2025-10-10 05:50:33] 2025-10-10 09:49:27,971 | INFO     | monitor loop #396: job 0:6837350278 is in state 'finished'
[2025-10-10 05:50:33] 2025-10-10 09:49:27,972 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 05:50:33] 2025-10-10 09:49:28,919 | INFO     | time since job start (5956s) is within the limit (172800.0s)
[2025-10-10 05:50:33] 2025-10-10 09:49:30,480 | INFO     | monitor loop #397: job 0:6837350278 is in state 'finished'
[2025-10-10 05:50:33] 2025-10-10 09:49:30,481 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 05:50:33] 2025-10-10 09:49:30,925 | INFO     | time since job start (5958s) is within the limit (172800.0s)
[2025-10-10 05:50:33] 2025-10-10 09:49:32,932 | INFO     | time since job start (5960s) is within the limit (172800.0s)
[2025-10-10 05:50:33] 2025-10-10 09:49:32,985 | INFO     | monitor loop #398: job 0:6837350278 is in state 'finished'
[2025-10-10 05:50:33] 2025-10-10 09:49:32,986 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 05:50:33] 2025-10-10 09:49:33,085 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-10 05:50:33] 2025-10-10 09:49:33,094 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.2213750000037
[2025-10-10 05:50:33] 2025-10-10 09:49:33,121 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6837350278/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 05:50:33] 2025-10-10 09:49:33,122 | INFO     | extracted standard info from prmon json
[2025-10-10 05:50:33] 2025-10-10 09:49:33,122 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 05:50:33] 2025-10-10 09:49:33,122 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 05:50:33] 2025-10-10 09:49:33,123 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 05:50:33] 2025-10-10 09:49:33,123 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 05:50:33] 2025-10-10 09:49:33,128 | INFO     | fitting pss+swap vs Time
[2025-10-10 05:50:33] 2025-10-10 09:49:33,128 | INFO     | sum of square deviations: 226003266.22222188
[2025-10-10 05:50:33] 2025-10-10 09:49:33,129 | INFO     | sum of deviations: 3316264523.222222
[2025-10-10 05:50:33] 2025-10-10 09:49:33,129 | INFO     | mean x: 1760086893.5555556
[2025-10-10 05:50:33] 2025-10-10 09:49:33,129 | INFO     | mean y: 2419749.1555555556
[2025-10-10 05:50:33] 2025-10-10 09:49:33,129 | INFO     | -- intersect: -25824258866.840385
[2025-10-10 05:50:33] 2025-10-10 09:49:33,129 | INFO     | intersect: -25824258866.840385
[2025-10-10 05:50:33] 2025-10-10 09:49:33,129 | INFO     | chi2: 0.16547386108556225
[2025-10-10 05:50:33] 2025-10-10 09:49:33,129 | INFO     | -- intersect: -25824258866.840385
[2025-10-10 05:50:33] 2025-10-10 09:49:33,129 | INFO     | current memory leak: 14.67 B/s (using 90 data points, chi2=0.17)
[2025-10-10 05:50:33] 2025-10-10 09:49:33,129 | INFO     | could have reported an average CPU frequency of 3792 MHz (7 samples)
[2025-10-10 05:50:33] 2025-10-10 09:49:33,130 | INFO     | ..............................
[2025-10-10 05:50:33] 2025-10-10 09:49:33,130 | INFO     | . Timing measurements:
[2025-10-10 05:50:33] 2025-10-10 09:49:33,130 | INFO     | . get job = 0 s
[2025-10-10 05:50:33] 2025-10-10 09:49:33,130 | INFO     | . initial setup = 4 s
[2025-10-10 05:50:33] 2025-10-10 09:49:33,130 | INFO     | . payload setup = 14 s
[2025-10-10 05:50:33] 2025-10-10 09:49:33,130 | INFO     | . stage-in = 0 s
[2025-10-10 05:50:33] 2025-10-10 09:49:33,130 | INFO     | . payload execution = 5883 s
[2025-10-10 05:50:33] 2025-10-10 09:49:33,130 | INFO     | . stage-out = 1 s
[2025-10-10 05:50:33] 2025-10-10 09:49:33,130 | INFO     | . log creation = 0 s
[2025-10-10 05:50:33] 2025-10-10 09:49:33,130 | INFO     | ..............................
[2025-10-10 05:50:33] 2025-10-10 09:49:33,355 | INFO     | 
[2025-10-10 05:50:33] 2025-10-10 09:49:33,355 | INFO     | job summary report
[2025-10-10 05:50:33] 2025-10-10 09:49:33,355 | INFO     | --------------------------------------------------
[2025-10-10 05:50:33] 2025-10-10 09:49:33,355 | INFO     | PanDA job id: 6837350278
[2025-10-10 05:50:33] 2025-10-10 09:49:33,355 | INFO     | task id: 46676269
[2025-10-10 05:50:33] 2025-10-10 09:49:33,355 | INFO     | errors: (none)
[2025-10-10 05:50:33] 2025-10-10 09:49:33,355 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 05:50:33] 2025-10-10 09:49:33,356 | INFO     | pilot state: finished 
[2025-10-10 05:50:33] 2025-10-10 09:49:33,356 | INFO     | transexitcode: 0
[2025-10-10 05:50:33] 2025-10-10 09:49:33,356 | INFO     | exeerrorcode: 0
[2025-10-10 05:50:33] 2025-10-10 09:49:33,356 | INFO     | exeerrordiag: 
[2025-10-10 05:50:33] 2025-10-10 09:49:33,356 | INFO     | exitcode: 0
[2025-10-10 05:50:33] 2025-10-10 09:49:33,356 | INFO     | exitmsg: OK
[2025-10-10 05:50:33] 2025-10-10 09:49:33,356 | INFO     | cpuconsumptiontime: 23181 s
[2025-10-10 05:50:33] 2025-10-10 09:49:33,356 | INFO     | nevents: 400
[2025-10-10 05:50:33] 2025-10-10 09:49:33,356 | INFO     | neventsw: 0
[2025-10-10 05:50:33] 2025-10-10 09:49:33,356 | INFO     | pid: 1324303
[2025-10-10 05:50:33] 2025-10-10 09:49:33,356 | INFO     | pgrp: 1324303
[2025-10-10 05:50:33] 2025-10-10 09:49:33,356 | INFO     | corecount: 8
[2025-10-10 05:50:33] 2025-10-10 09:49:33,356 | INFO     | event service: False
[2025-10-10 05:50:33] 2025-10-10 09:49:33,356 | INFO     | sizes: {0: 2348855, 1: 2348855, 11: 2348883, 14: 2349173, 22: 2349201, 5902: 2376131, 5903: 2376258, 5904: 2385312, 5907: 2385368, 5925: 2385562}
[2025-10-10 05:50:33] 2025-10-10 09:49:33,356 | INFO     | --------------------------------------------------
[2025-10-10 05:50:33] 2025-10-10 09:49:33,356 | INFO     | 
[2025-10-10 05:50:33] 2025-10-10 09:49:33,356 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-10-10 05:50:33] 2025-10-10 09:49:33,435 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 05:50:33] 2025-10-10 09:49:33,435 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 05:50:33] 2025-10-10 09:49:33,435 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 05:50:33] 2025-10-10 09:49:33,435 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 05:50:33] 2025-10-10 09:49:33,435 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 05:50:33] 2025-10-10 09:49:33,435 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 05:50:33] 2025-10-10 09:49:33,435 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 05:50:33] 2025-10-10 09:49:33,435 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 05:50:33] 2025-10-10 09:49:33,435 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 05:50:33] 2025-10-10 09:49:33,435 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 05:50:33] 2025-10-10 09:49:33,435 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 05:50:33] 2025-10-10 09:49:33,435 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 05:50:33] 2025-10-10 09:49:33,435 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 05:50:33] 2025-10-10 09:49:33,435 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 05:50:33] 2025-10-10 09:49:33,435 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 05:50:33] 2025-10-10 09:49:33,435 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 05:50:33] 2025-10-10 09:49:33,435 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 05:50:33] 2025-10-10 09:49:33,435 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 05:50:33] 2025-10-10 09:49:33,436 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 05:50:33] 2025-10-10 09:49:33,436 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 05:50:33] 2025-10-10 09:49:33,436 | INFO     | job 6837350278 has completed (purged errors)
[2025-10-10 05:50:33] 2025-10-10 09:49:33,436 | INFO     | overall cleanup function is called
[2025-10-10 05:50:33] 2025-10-10 09:49:34,444 | INFO     | --- collectZombieJob: --- 10, [1324303]
[2025-10-10 05:50:33] 2025-10-10 09:49:34,445 | INFO     | zombie collector waiting for pid 1324303
[2025-10-10 05:50:33] 2025-10-10 09:49:34,445 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 05:50:33] 2025-10-10 09:49:34,445 | INFO     | collected zombie processes
[2025-10-10 05:50:33] 2025-10-10 09:49:34,445 | INFO     | will attempt to kill all subprocesses of pid=1324303
[2025-10-10 05:50:33] 2025-10-10 09:49:35,803 | INFO     | process IDs to be killed: [1324303] (in reverse order)
[2025-10-10 05:50:33] 2025-10-10 09:49:36,010 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 05:50:33] 2025-10-10 09:49:36,011 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 05:50:33] 2025-10-10 09:49:36,037 | INFO     | did not find any defunct processes belonging to 1324303
[2025-10-10 05:50:33] 2025-10-10 09:49:36,065 | INFO     | did not find any defunct processes belonging to 1324303
[2025-10-10 05:50:33] 2025-10-10 09:49:36,065 | INFO     | ready for new job
[2025-10-10 05:50:33] 2025-10-10 09:49:36,066 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 05:50:33] 2025-10-10 09:49:36,067 | INFO     | ***************************************
[2025-10-10 05:50:33] 2025-10-10 09:49:36,067 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 05:50:33] 2025-10-10 09:49:36,067 | INFO     | ***************************************
[2025-10-10 05:50:33] 2025-10-10 09:49:36,067 | INFO     | 
[2025-10-10 05:50:33] 2025-10-10 09:49:36,090 | INFO     | architecture information:
[2025-10-10 05:50:33] 2025-10-10 09:49:36,091 | INFO     | executing command: cat /etc/os-release
[2025-10-10 05:50:33] 2025-10-10 09:49:36,131 | INFO     | cat /etc/os-release:
[2025-10-10 05:50:33] NAME="CentOS Linux"
[2025-10-10 05:50:33] VERSION="7 (Core)"
[2025-10-10 05:50:33] ID="centos"
[2025-10-10 05:50:33] ID_LIKE="rhel fedora"
[2025-10-10 05:50:33] VERSION_ID="7"
[2025-10-10 05:50:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 05:50:33] ANSI_COLOR="0;31"
[2025-10-10 05:50:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 05:50:33] HOME_URL="https://www.centos.org/"
[2025-10-10 05:50:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 05:50:33] 
[2025-10-10 05:50:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 05:50:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 05:50:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 05:50:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 05:50:33] 
[2025-10-10 05:50:33] 2025-10-10 09:49:36,131 | INFO     | ***************************************
[2025-10-10 05:50:33] 2025-10-10 09:49:36,635 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-10-10 05:50:33] 2025-10-10 09:49:36,674 | INFO     | sufficient remaining disk space (168942370816 B)
[2025-10-10 05:50:33] 2025-10-10 09:49:36,674 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 05:50:33] 2025-10-10 09:49:36,674 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 05:50:33] 2025-10-10 09:49:36,674 | INFO     | update_server=False
[2025-10-10 05:50:33] 2025-10-10 09:49:36,674 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 05:50:33] 2025-10-10 09:49:36,675 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 05:50:33] 2025-10-10 09:49:36,675 | INFO     | aborting loop
[2025-10-10 05:50:33] 2025-10-10 09:49:36,975 | INFO     | all data control threads have been joined
[2025-10-10 05:50:33] 2025-10-10 09:49:37,272 | INFO     | all payload control threads have been joined
[2025-10-10 05:50:33] 2025-10-10 09:49:37,488 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 05:50:33] 2025-10-10 09:49:37,687 | INFO     | [job] retrieve thread has finished
[2025-10-10 05:50:33] 2025-10-10 09:49:37,687 | INFO     | [job] job monitor thread has finished
[2025-10-10 05:50:33] 2025-10-10 09:49:37,818 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 05:50:33] 2025-10-10 09:49:37,852 | INFO     | [data] copytool_in thread has finished
[2025-10-10 05:50:33] 2025-10-10 09:49:37,853 | INFO     | all job control threads have been joined
[2025-10-10 05:50:33] 2025-10-10 09:49:37,974 | INFO     | [payload] failed_post thread has finished
[2025-10-10 05:50:33] 2025-10-10 09:49:37,981 | INFO     | [data] control thread has finished
[2025-10-10 05:50:33] 2025-10-10 09:49:38,278 | INFO     | [payload] control thread has finished
[2025-10-10 05:50:33] 2025-10-10 09:49:38,368 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 05:50:33] 2025-10-10 09:49:38,522 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 05:50:33] 2025-10-10 09:49:38,859 | INFO     | [job] control thread has finished
[2025-10-10 05:50:33] 2025-10-10 09:49:38,860 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 05:50:33] 2025-10-10 09:49:38,937 | INFO     | [payload] validate_post thread has finished
[2025-10-10 05:50:33] 2025-10-10 09:49:38,987 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 05:50:33] 2025-10-10 09:49:39,069 | INFO     | [job] validate thread has finished
[2025-10-10 05:50:33] 2025-10-10 09:49:39,374 | INFO     | [job] queue monitor thread has finished
[2025-10-10 05:50:33] 2025-10-10 09:49:39,526 | INFO     | [data] copytool_out thread has finished
[2025-10-10 05:50:33] 2025-10-10 09:49:42,870 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 05:50:33] 2025-10-10 09:49:47,252 | INFO     | job.realtimelogging is not enabled
[2025-10-10 05:50:33] 2025-10-10 09:49:48,257 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 05:50:33] 2025-10-10 09:50:06,741 | INFO     | PID=1316168 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 05:50:33] 2025-10-10 09:50:06,741 | INFO     | .. there are 35 such processes running
[2025-10-10 05:50:33] 2025-10-10 09:50:06,742 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 05:50:33] 2025-10-10 09:50:06,742 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 05:50:33] 2025-10-10 09:50:06,742 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 05:50:33] 2025-10-10 09:50:22,263 | INFO     | [monitor] cgroup control has ended
[2025-10-10 05:50:33] 2025-10-10 09:50:23,618 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139746133223232)>', '<ExcThread(monitor, started 139745778706176)>']
[2025-10-10 05:50:33] 2025-10-10 09:50:23,868 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 05:50:33] 2025-10-10 09:50:23,869 | INFO     | [monitor] control thread has ended
[2025-10-10 05:50:33] 2025-10-10 09:50:28,646 | INFO     | all workflow threads have been joined
[2025-10-10 05:50:33] 2025-10-10 09:50:28,647 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 05:50:33] 2025-10-10 09:50:28,647 | INFO     | traces error code: 0
[2025-10-10 05:50:33] 2025-10-10 09:50:28,647 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 05:50:33] 2025-10-10 09:50:29,090 [wrapper] ==== pilot stdout END ====
[2025-10-10 05:50:33] 2025-10-10 09:50:29,114 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 05:50:33] 2025-10-10 09:50:29,124 [wrapper] pilotpid: 1316168
[2025-10-10 05:50:33] 2025-10-10 09:50:29,152 [wrapper] Pilot exit status: 0
[2025-10-10 05:50:33] 2025-10-10 09:50:29,198 [wrapper] pandaids: 6837350278
[2025-10-10 05:50:33] 2025-10-10 09:50:29,413 [wrapper] cleanup supervisor_pilot 1843884 1316169
[2025-10-10 05:50:33] 2025-10-10 09:50:29,415 [wrapper] Test setup, not cleaning
[2025-10-10 05:50:33] 2025-10-10 09:50:29,416 [wrapper] apfmon messages muted
[2025-10-10 05:50:33] 2025-10-10 09:50:29,418 [wrapper] ==== wrapper stdout END ====
[2025-10-10 05:50:33] 2025-10-10 09:50:29,419 [wrapper] ==== wrapper stderr END ====
[2025-10-10 05:50:33]  *** Error codes and diagnostics ***
[2025-10-10 05:50:33]     "exeErrorCode": 0,
[2025-10-10 05:50:33]     "exeErrorDiag": "",
[2025-10-10 05:50:33]     "pilotErrorCode": 0,
[2025-10-10 05:50:33]     "pilotErrorDiag": "",
[2025-10-10 05:50:33]  *** Listing of results directory ***
[2025-10-10 05:50:33] total 412404
[2025-10-10 05:50:33] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 11:29 pilot3.tar.gz
[2025-10-10 05:50:33] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 11:43 queuedata.json
[2025-10-10 05:50:33] -rwx------. 1 boincer umatlas     36292 Oct  9 11:44 runpilot2-wrapper.sh
[2025-10-10 05:50:33] -rw-r--r--. 1 boincer umatlas       100 Oct 10 04:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 05:50:33] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 04:09 run_atlas
[2025-10-10 05:50:33] -rw-r--r--. 1 boincer umatlas       105 Oct 10 04:09 job.xml
[2025-10-10 05:50:33] -rw-r--r--. 2 boincer umatlas 220132403 Oct 10 04:09 EVNT.46676267._000411.pool.root.1
[2025-10-10 05:50:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 04:09 start_atlas.sh
[2025-10-10 05:50:33] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 04:09 shared
[2025-10-10 05:50:33] -rw-r--r--. 2 boincer umatlas    569679 Oct 10 04:09 input.tar.gz
[2025-10-10 05:50:33] -rw-r--r--. 1 boincer umatlas         0 Oct 10 04:09 boinc_lockfile
[2025-10-10 05:50:33] -rw-r--r--. 1 boincer umatlas      2549 Oct 10 04:09 pandaJob.out
[2025-10-10 05:50:33] -rw-------. 1 boincer umatlas    975454 Oct 10 04:10 agis_schedconf.cvmfs.json
[2025-10-10 05:50:33] -rw-------. 1 boincer umatlas   1560580 Oct 10 04:10 agis_ddmendpoints.agis.ALL.json
[2025-10-10 05:50:33] drwx------. 5 boincer umatlas      4096 Oct 10 04:10 pilot3
[2025-10-10 05:50:33] -rw-r--r--. 1 boincer umatlas      7161 Oct 10 05:47 init_data.xml
[2025-10-10 05:50:33] -rw-------. 1 boincer umatlas 195942906 Oct 10 05:48 HITS.46676269._021645.pool.root.1
[2025-10-10 05:50:33] -rw-r--r--. 1 boincer umatlas       529 Oct 10 05:48 boinc_task_state.xml
[2025-10-10 05:50:33] -rw-------. 1 boincer umatlas      1044 Oct 10 05:49 memory_monitor_summary.json
[2025-10-10 05:50:33] -rw-------. 1 boincer umatlas    349090 Oct 10 05:49 log.46676269._021645.job.log.tgz.1
[2025-10-10 05:50:33] -rw-------. 1 boincer umatlas      7789 Oct 10 05:49 heartbeat.json
[2025-10-10 05:50:33] -rw-------. 1 boincer umatlas        95 Oct 10 05:50 pilot_heartbeat.json
[2025-10-10 05:50:33] -rw-------. 1 boincer umatlas      4897 Oct 10 05:50 pilotlog.txt
[2025-10-10 05:50:33] -rw-------. 1 boincer umatlas    812750 Oct 10 05:50 log.46676269._021645.job.log.1
[2025-10-10 05:50:33] -rw-------. 1 boincer umatlas       357 Oct 10 05:50 output.list
[2025-10-10 05:50:33] -rw-r--r--. 1 boincer umatlas       620 Oct 10 05:50 runtime_log
[2025-10-10 05:50:33] -rw-------. 1 boincer umatlas   1177600 Oct 10 05:50 result.tar.gz
[2025-10-10 05:50:33] -rw-------. 1 boincer umatlas       654 Oct 10 05:50 V66NDmPz7Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmncaNDm2CInLn.diag
[2025-10-10 05:50:33] -rw-r--r--. 1 boincer umatlas      8698 Oct 10 05:50 runtime_log.err
[2025-10-10 05:50:33] -rw-r--r--. 1 boincer umatlas        27 Oct 10 05:50 wrapper_checkpoint.txt
[2025-10-10 05:50:33] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 05:50 boinc_mmap_file
[2025-10-10 05:50:33] -rw-r--r--. 1 boincer umatlas     22300 Oct 10 05:50 stderr.txt
[2025-10-10 05:50:33] HITS file was successfully produced:
[2025-10-10 05:50:33] -rw-------. 1 boincer umatlas 195942906 Oct 10 05:48 shared/HITS.pool.root.1
[2025-10-10 05:50:33]  *** Contents of shared directory: ***
[2025-10-10 05:50:33] total 408060
[2025-10-10 05:50:33] -rw-r--r--. 2 boincer umatlas 220132403 Oct 10 04:09 ATLAS.root_0
[2025-10-10 05:50:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 04:09 start_atlas.sh
[2025-10-10 05:50:33] -rw-r--r--. 2 boincer umatlas    569679 Oct 10 04:09 input.tar.gz
[2025-10-10 05:50:33] -rw-------. 1 boincer umatlas 195942906 Oct 10 05:48 HITS.pool.root.1
[2025-10-10 05:50:33] -rw-------. 1 boincer umatlas   1177600 Oct 10 05:50 result.tar.gz
05:50:34 (1307910): run_atlas exited; CPU time 23299.774156
05:50:34 (1307910): called boinc_finish(0)

</stderr_txt>
]]>

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