Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:40:00 (78382): wrapper (7.7.26015): starting
12:40:00 (78382): wrapper: running run_atlas (--nthreads 4)
[2025-10-10 12:40:00] Arguments: --nthreads 4
[2025-10-10 12:40:00] Threads: 4
[2025-10-10 12:40:00] Checking for CVMFS
[2025-10-10 12:40:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 12:40:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 12:40:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 12:40:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 12:40:00] 2.9.2.0 3102 213 60440 151543 3 57 28763971 36864000 0 130560 0 196393 99.980 12158 1292 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-10 12:40:00] CVMFS is ok
[2025-10-10 12:40:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 12:40:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 12:40:00] Further information can be found at the LHC@home message board.
[2025-10-10 12:40:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 12:40:00] Checking for apptainer binary...
[2025-10-10 12:40:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 12:40:00] Running /usr/bin/apptainer --version
[2025-10-10 12:40:00] apptainer version 1.4.1-1.1
[2025-10-10 12:40:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 12:40:00] thA325
[2025-10-10 12:40:00] apptainer works
[2025-10-10 12:40:00] Set ATHENA_PROC_NUMBER=4
[2025-10-10 12:40:00] Set ATHENA_CORE_NUMBER=4
[2025-10-10 12:40:00] Starting ATLAS job with PandaID=6837365058
[2025-10-10 12:40:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 13:48:17]  *** The last 200 lines of the pilot log: ***
[2025-10-10 13:48:17] 2025-10-10 11:47:24,751 | INFO     | all payload control threads have been joined
[2025-10-10 13:48:17] 2025-10-10 11:47:25,370 | INFO     | [job] retrieve thread has finished
[2025-10-10 13:48:17] 2025-10-10 11:47:25,371 | INFO     | [job] job monitor thread has finished
[2025-10-10 13:48:17] 2025-10-10 11:47:25,371 | INFO     | [job] queue monitor thread has finished
[2025-10-10 13:48:17] 2025-10-10 11:47:25,420 | INFO     | [data] control thread has finished
[2025-10-10 13:48:17] 2025-10-10 11:47:25,523 | INFO     | [job] control thread has finished
[2025-10-10 13:48:17] 2025-10-10 11:47:25,587 | INFO     | [payload] validate_post thread has finished
[2025-10-10 13:48:17] 2025-10-10 11:47:25,757 | INFO     | [payload] control thread has finished
[2025-10-10 13:48:17] 2025-10-10 11:47:25,911 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 13:48:17] 2025-10-10 11:47:26,371 | INFO     | [data] copytool_out thread has finished
[2025-10-10 13:48:17] 2025-10-10 11:47:26,385 | INFO     | [job] validate thread has finished
[2025-10-10 13:48:17] 2025-10-10 11:47:26,476 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 13:48:17] 2025-10-10 11:47:26,524 | INFO     | [data] copytool_in thread has finished
[2025-10-10 13:48:17] 2025-10-10 11:47:26,546 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 13:48:17] 2025-10-10 11:47:26,603 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 13:48:17] 2025-10-10 11:47:26,609 | INFO     | [payload] failed_post thread has finished
[2025-10-10 13:48:17] 2025-10-10 11:47:29,917 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 13:48:17] 2025-10-10 11:47:34,459 | INFO     | job.realtimelogging is not enabled
[2025-10-10 13:48:17] 2025-10-10 11:47:35,465 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 13:48:17] 2025-10-10 11:47:53,980 | INFO     | PID=82182 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-10 13:48:17] 2025-10-10 11:47:53,980 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 13:48:17] 2025-10-10 11:47:53,980 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 13:48:17] 2025-10-10 11:47:53,980 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 13:48:17] 2025-10-10 11:48:11,716 | INFO     | [monitor] cgroup control has ended
[2025-10-10 13:48:17] 2025-10-10 11:48:12,460 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140390897792832)>', '<ExcThread(monitor, started 140390132872960)>']
[2025-10-10 13:48:17] 2025-10-10 11:48:13,077 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 13:48:17] 2025-10-10 11:48:13,078 | INFO     | [monitor] control thread has ended
[2025-10-10 13:48:17] 2025-10-10 11:48:17,486 | INFO     | all workflow threads have been joined
[2025-10-10 13:48:17] 2025-10-10 11:48:17,486 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 13:48:17] 2025-10-10 11:48:17,486 | INFO     | traces error code: 0
[2025-10-10 13:48:17] 2025-10-10 11:48:17,487 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 13:48:17] 2025-10-10 11:48:17,554 [wrapper] ==== pilot stdout END ====
[2025-10-10 13:48:17] 2025-10-10 11:48:17,558 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 13:48:17] 2025-10-10 11:48:17,561 [wrapper] pilotpid: 82182
[2025-10-10 13:48:17] 2025-10-10 11:48:17,565 [wrapper] Pilot exit status: 0
[2025-10-10 13:48:17] 2025-10-10 11:48:17,575 [wrapper] pandaids: 6837365058
[2025-10-10 13:48:17] 2025-10-10 11:48:17,594 [wrapper] cleanup supervisor_pilot   98367 82183
[2025-10-10 13:48:17] 2025-10-10 11:48:17,597 [wrapper] Test setup, not cleaning
[2025-10-10 13:48:17] 2025-10-10 11:48:17,600 [wrapper] apfmon messages muted
[2025-10-10 13:48:17] 2025-10-10 11:48:17,604 [wrapper] ==== wrapper stdout END ====
[2025-10-10 13:48:17] 2025-10-10 11:48:17,607 [wrapper] ==== wrapper stderr END ====
[2025-10-10 13:48:17]  *** Error codes and diagnostics ***
[2025-10-10 13:48:17]     "exeErrorCode": 0,
[2025-10-10 13:48:17]     "exeErrorDiag": "",
[2025-10-10 13:48:17]     "pilotErrorCode": 0,
[2025-10-10 13:48:17]     "pilotErrorDiag": "",
[2025-10-10 13:48:17]  *** Listing of results directory ***
[2025-10-10 13:48:17] total 414468
[2025-10-10 13:48:17] -rw-r--r-- 1 boinc boinc    557409 Oct 10 00:24 pilot3.tar.gz
[2025-10-10 13:48:17] -rw-r--r-- 1 boinc boinc      5112 Oct 10 00:33 queuedata.json
[2025-10-10 13:48:17] -rwx------ 1 boinc boinc     36292 Oct 10 00:34 runpilot2-wrapper.sh
[2025-10-10 13:48:17] -rw-r--r-- 1 boinc boinc       100 Oct 10 12:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 13:48:17] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 12:40 run_atlas
[2025-10-10 13:48:17] -rw-r--r-- 1 boinc boinc       105 Oct 10 12:40 job.xml
[2025-10-10 13:48:17] -rw-r--r-- 2 boinc boinc 222880963 Oct 10 12:40 EVNT.46676267._001153.pool.root.1
[2025-10-10 13:48:17] -rw-r--r-- 2 boinc boinc    569675 Oct 10 12:40 input.tar.gz
[2025-10-10 13:48:17] -rw-r--r-- 2 boinc boinc     15120 Oct 10 12:40 start_atlas.sh
[2025-10-10 13:48:17] drwxrwx--x 2 boinc boinc      4096 Oct 10 12:40 shared
[2025-10-10 13:48:17] -rw-r--r-- 1 boinc boinc         0 Oct 10 12:40 boinc_setup_complete
[2025-10-10 13:48:17] -rw-r--r-- 1 boinc boinc      6368 Oct 10 12:40 init_data.xml
[2025-10-10 13:48:17] -rw-r--r-- 1 boinc boinc         0 Oct 10 12:40 boinc_lockfile
[2025-10-10 13:48:17] -rw-r--r-- 1 boinc boinc      2549 Oct 10 12:40 pandaJob.out
[2025-10-10 13:48:17] -rw------- 1 boinc boinc    975528 Oct 10 12:40 agis_schedconf.cvmfs.json
[2025-10-10 13:48:17] -rw------- 1 boinc boinc   1560580 Oct 10 12:40 agis_ddmendpoints.agis.ALL.json
[2025-10-10 13:48:17] drwx------ 5 boinc boinc      4096 Oct 10 12:40 pilot3
[2025-10-10 13:48:17] -rw------- 1 boinc boinc 195948029 Oct 10 13:46 HITS.46676269._027434.pool.root.1
[2025-10-10 13:48:17] -rw-r--r-- 1 boinc boinc       529 Oct 10 13:47 boinc_task_state.xml
[2025-10-10 13:48:17] -rw------- 1 boinc boinc      1023 Oct 10 13:47 memory_monitor_summary.json
[2025-10-10 13:48:17] -rw------- 1 boinc boinc    244907 Oct 10 13:47 log.46676269._027434.job.log.tgz.1
[2025-10-10 13:48:17] -rw------- 1 boinc boinc      7758 Oct 10 13:47 heartbeat.json
[2025-10-10 13:48:17] -rw------- 1 boinc boinc        95 Oct 10 13:47 pilot_heartbeat.json
[2025-10-10 13:48:17] -rw-r--r-- 1 boinc boinc      8192 Oct 10 13:48 boinc_mmap_file
[2025-10-10 13:48:17] -rw-r--r-- 1 boinc boinc        27 Oct 10 13:48 wrapper_checkpoint.txt
[2025-10-10 13:48:17] -rw------- 1 boinc boinc      4822 Oct 10 13:48 pilotlog.txt
[2025-10-10 13:48:17] -rw------- 1 boinc boinc    601942 Oct 10 13:48 log.46676269._027434.job.log.1
[2025-10-10 13:48:17] -rw------- 1 boinc boinc       357 Oct 10 13:48 output.list
[2025-10-10 13:48:17] -rw-r--r-- 1 boinc boinc       620 Oct 10 13:48 runtime_log
[2025-10-10 13:48:17] -rw------- 1 boinc boinc    870400 Oct 10 13:48 result.tar.gz
[2025-10-10 13:48:17] -rw-r--r-- 1 boinc boinc      8777 Oct 10 13:48 runtime_log.err
[2025-10-10 13:48:17] -rw------- 1 boinc boinc       658 Oct 10 13:48 erUKDmlOER8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFWbNDm6CkKqm.diag
[2025-10-10 13:48:17] -rw-r--r-- 1 boinc boinc      6616 Oct 10 13:48 stderr.txt
[2025-10-10 13:48:17] HITS file was successfully produced:
[2025-10-10 13:48:17] -rw------- 1 boinc boinc 195948029 Oct 10 13:46 shared/HITS.pool.root.1
[2025-10-10 13:48:17]  *** Contents of shared directory: ***
[2025-10-10 13:48:17] total 410452
[2025-10-10 13:48:17] -rw-r--r-- 2 boinc boinc 222880963 Oct 10 12:40 ATLAS.root_0
[2025-10-10 13:48:17] -rw-r--r-- 2 boinc boinc    569675 Oct 10 12:40 input.tar.gz
[2025-10-10 13:48:17] -rw-r--r-- 2 boinc boinc     15120 Oct 10 12:40 start_atlas.sh
[2025-10-10 13:48:17] -rw------- 1 boinc boinc 195948029 Oct 10 13:46 HITS.pool.root.1
[2025-10-10 13:48:17] -rw------- 1 boinc boinc    870400 Oct 10 13:48 result.tar.gz
13:48:18 (78382): run_atlas exited; CPU time 15167.633195
13:48:18 (78382): called boinc_finish(0)

</stderr_txt>
]]>

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