Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:53:52 (24315): wrapper (7.7.26015): starting
03:53:52 (24315): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 03:53:52] Arguments: --nthreads 12
[2025-10-10 03:53:52] Threads: 12
[2025-10-10 03:53:52] Checking for CVMFS
[2025-10-10 03:53:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 03:53:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 03:53:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 03:53:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 03:53:53] 2.11.2.0 3297 219681 95844 151538 1 57 11406871 20275201 1 130560 2 105768237 99.984 12868463 12231 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 03:53:53] CVMFS is ok
[2025-10-10 03:53:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 03:53:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 03:53:53] Further information can be found at the LHC@home message board.
[2025-10-10 03:53:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 03:53:53] Checking for apptainer binary...
[2025-10-10 03:53:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 03:53:53] Running /usr/bin/apptainer --version
[2025-10-10 03:53:53] apptainer version 1.3.2-1.el7
[2025-10-10 03:53:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 03:53:54] c-205-22.aglt2.org
[2025-10-10 03:53:54] apptainer works
[2025-10-10 03:53:54] Set ATHENA_PROC_NUMBER=12
[2025-10-10 03:53:54] Set ATHENA_CORE_NUMBER=12
[2025-10-10 03:53:54] Starting ATLAS job with PandaID=6837376039
[2025-10-10 03:53:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 05:05:23]  *** The last 200 lines of the pilot log: ***
[2025-10-10 05:05:23]  status_code=0
[2025-10-10 05:05:23]  storage_token=
[2025-10-10 05:05:23]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6837376039/log.46676269._028221.job.log.tgz.1
[2025-10-10 05:05:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0d/52/log.46676269._028221.job.log.tgz.1
[2025-10-10 05:05:23]  workdir=None
[2025-10-10 05:05:23] ]
[2025-10-10 05:05:23] 2025-10-10 09:04:55,757 | INFO     | transferring file log.46676269._028221.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6837376039/log.46676269._028221.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-10 05:05:23] 2025-10-10 09:04:55,757 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6837376039/log.46676269._028221.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._028221.job
[2025-10-10 05:05:23] 2025-10-10 09:04:55,778 | INFO     | adding to output.list: log.46676269._028221.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0d/52/log.46676269._028221.job.log.tg
[2025-10-10 05:05:23] 2025-10-10 09:04:55,779 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 05:05:23] 2025-10-10 09:04:55,779 | INFO     | summary of transferred files:
[2025-10-10 05:05:23] 2025-10-10 09:04:55,780 | INFO     |  -- lfn=log.46676269._028221.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 05:05:23] 2025-10-10 09:04:55,780 | INFO     | stage-out finished correctly
[2025-10-10 05:05:23] 2025-10-10 09:04:56,017 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 05:05:23] 2025-10-10 09:04:56,066 | INFO     | time since job start (4247s) is within the limit (172800.0s)
[2025-10-10 05:05:23] 2025-10-10 09:04:56,101 | INFO     | job 6837376039 has state=finished
[2025-10-10 05:05:23] 2025-10-10 09:04:56,101 | INFO     | preparing for final server update for job 6837376039 in state='finished'
[2025-10-10 05:05:23] 2025-10-10 09:04:56,102 | INFO     | this job has now completed (state=finished)
[2025-10-10 05:05:23] 2025-10-10 09:04:56,102 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 05:05:23] 2025-10-10 09:04:56,102 | INFO     | log transfer has been attempted: DONE
[2025-10-10 05:05:23] 2025-10-10 09:04:56,102 | INFO     | job 6837376039 has finished - writing final server update
[2025-10-10 05:05:23] 2025-10-10 09:04:56,103 | INFO     | total number of processed events: 400 (read)
[2025-10-10 05:05:23] 2025-10-10 09:04:56,103 | INFO     | executing command: lscpu
[2025-10-10 05:05:23] 2025-10-10 09:04:56,128 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 05:05:23] 2025-10-10 09:04:56,460 | WARNING  | process 2148 can no longer be monitored (due to stat problems) - aborting
[2025-10-10 05:05:23] 2025-10-10 09:04:56,460 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837376039/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 05:05:23] 2025-10-10 09:04:56,547 | INFO     | number of running child processes to parent process 2148: 1
[2025-10-10 05:05:23] 2025-10-10 09:04:56,547 | INFO     | maximum number of monitored processes: 6
[2025-10-10 05:05:23] 2025-10-10 09:04:58,077 | INFO     | time since job start (4249s) is within the limit (172800.0s)
[2025-10-10 05:05:23] 2025-10-10 09:04:59,050 | INFO     | monitor loop #316: job 0:6837376039 is in state 'finished'
[2025-10-10 05:05:23] 2025-10-10 09:04:59,050 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 05:05:23] 2025-10-10 09:05:00,083 | INFO     | time since job start (4251s) is within the limit (172800.0s)
[2025-10-10 05:05:23] 2025-10-10 09:05:01,553 | INFO     | monitor loop #317: job 0:6837376039 is in state 'finished'
[2025-10-10 05:05:23] 2025-10-10 09:05:01,553 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 05:05:23] 2025-10-10 09:05:01,850 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-10 05:05:23] 2025-10-10 09:05:01,853 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2025-10-10 05:05:23] 2025-10-10 09:05:01,856 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837376039/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 05:05:23] 2025-10-10 09:05:01,857 | INFO     | extracted standard info from prmon json
[2025-10-10 05:05:23] 2025-10-10 09:05:01,857 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 05:05:23] 2025-10-10 09:05:01,857 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 05:05:23] 2025-10-10 09:05:01,857 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 05:05:23] 2025-10-10 09:05:01,857 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 05:05:23] 2025-10-10 09:05:01,859 | INFO     | fitting pss+swap vs Time
[2025-10-10 05:05:23] 2025-10-10 09:05:01,859 | INFO     | sum of square deviations: 77515872.0
[2025-10-10 05:05:23] 2025-10-10 09:05:01,859 | INFO     | sum of deviations: -4308581767.999999
[2025-10-10 05:05:23] 2025-10-10 09:05:01,859 | INFO     | mean x: 1760085074.0
[2025-10-10 05:05:23] 2025-10-10 09:05:01,860 | INFO     | mean y: 2729126.873015873
[2025-10-10 05:05:23] 2025-10-10 09:05:01,860 | INFO     | -- intersect: 97833925039.43825
[2025-10-10 05:05:23] 2025-10-10 09:05:01,860 | INFO     | intersect: 97833925039.43825
[2025-10-10 05:05:23] 2025-10-10 09:05:01,860 | INFO     | chi2: 0.07832934184912724
[2025-10-10 05:05:23] 2025-10-10 09:05:01,860 | INFO     | -- intersect: 97833925039.43825
[2025-10-10 05:05:23] 2025-10-10 09:05:01,860 | INFO     | current memory leak: -55.58 B/s (using 63 data points, chi2=0.08)
[2025-10-10 05:05:23] 2025-10-10 09:05:01,861 | INFO     | could have reported an average CPU frequency of 2047 MHz (6 samples)
[2025-10-10 05:05:23] 2025-10-10 09:05:01,861 | INFO     | ..............................
[2025-10-10 05:05:23] 2025-10-10 09:05:01,861 | INFO     | . Timing measurements:
[2025-10-10 05:05:23] 2025-10-10 09:05:01,861 | INFO     | . get job = 0 s
[2025-10-10 05:05:23] 2025-10-10 09:05:01,861 | INFO     | . initial setup = 2 s
[2025-10-10 05:05:23] 2025-10-10 09:05:01,861 | INFO     | . payload setup = 7 s
[2025-10-10 05:05:23] 2025-10-10 09:05:01,861 | INFO     | . stage-in = 0 s
[2025-10-10 05:05:23] 2025-10-10 09:05:01,861 | INFO     | . payload execution = 4218 s
[2025-10-10 05:05:23] 2025-10-10 09:05:01,861 | INFO     | . stage-out = 0 s
[2025-10-10 05:05:23] 2025-10-10 09:05:01,862 | INFO     | . log creation = 0 s
[2025-10-10 05:05:23] 2025-10-10 09:05:01,862 | INFO     | ..............................
[2025-10-10 05:05:23] 2025-10-10 09:05:02,051 | INFO     | 
[2025-10-10 05:05:23] 2025-10-10 09:05:02,051 | INFO     | job summary report
[2025-10-10 05:05:23] 2025-10-10 09:05:02,052 | INFO     | --------------------------------------------------
[2025-10-10 05:05:23] 2025-10-10 09:05:02,052 | INFO     | PanDA job id: 6837376039
[2025-10-10 05:05:23] 2025-10-10 09:05:02,052 | INFO     | task id: 46676269
[2025-10-10 05:05:23] 2025-10-10 09:05:02,052 | INFO     | errors: (none)
[2025-10-10 05:05:23] 2025-10-10 09:05:02,052 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 05:05:23] 2025-10-10 09:05:02,052 | INFO     | pilot state: finished 
[2025-10-10 05:05:23] 2025-10-10 09:05:02,053 | INFO     | transexitcode: 0
[2025-10-10 05:05:23] 2025-10-10 09:05:02,053 | INFO     | exeerrorcode: 0
[2025-10-10 05:05:23] 2025-10-10 09:05:02,053 | INFO     | exeerrordiag: 
[2025-10-10 05:05:23] 2025-10-10 09:05:02,053 | INFO     | exitcode: 0
[2025-10-10 05:05:23] 2025-10-10 09:05:02,053 | INFO     | exitmsg: OK
[2025-10-10 05:05:23] 2025-10-10 09:05:02,053 | INFO     | cpuconsumptiontime: 44999 s
[2025-10-10 05:05:23] 2025-10-10 09:05:02,053 | INFO     | nevents: 400
[2025-10-10 05:05:23] 2025-10-10 09:05:02,054 | INFO     | neventsw: 0
[2025-10-10 05:05:23] 2025-10-10 09:05:02,054 | INFO     | pid: 2148
[2025-10-10 05:05:23] 2025-10-10 09:05:02,054 | INFO     | pgrp: 2148
[2025-10-10 05:05:23] 2025-10-10 09:05:02,054 | INFO     | corecount: 12
[2025-10-10 05:05:23] 2025-10-10 09:05:02,054 | INFO     | event service: False
[2025-10-10 05:05:23] 2025-10-10 09:05:02,054 | INFO     | sizes: {0: 2348686, 1: 2348885, 5: 2349147, 11: 2349203, 4229: 2375099, 4230: 2384281, 4236: 2384419}
[2025-10-10 05:05:23] 2025-10-10 09:05:02,055 | INFO     | --------------------------------------------------
[2025-10-10 05:05:23] 2025-10-10 09:05:02,055 | INFO     | 
[2025-10-10 05:05:23] 2025-10-10 09:05:02,055 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 05:05:23] 2025-10-10 09:05:02,078 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 05:05:23] 2025-10-10 09:05:02,086 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 05:05:23] 2025-10-10 09:05:02,087 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 05:05:23] 2025-10-10 09:05:02,087 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 05:05:23] 2025-10-10 09:05:02,087 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 05:05:23] 2025-10-10 09:05:02,087 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 05:05:23] 2025-10-10 09:05:02,087 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 05:05:23] 2025-10-10 09:05:02,087 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 05:05:23] 2025-10-10 09:05:02,088 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 05:05:23] 2025-10-10 09:05:02,088 | INFO     | time since job start (4253s) is within the limit (172800.0s)
[2025-10-10 05:05:23] 2025-10-10 09:05:02,088 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 05:05:23] 2025-10-10 09:05:02,089 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 05:05:23] 2025-10-10 09:05:02,089 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 05:05:23] 2025-10-10 09:05:02,089 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 05:05:23] 2025-10-10 09:05:02,089 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 05:05:23] 2025-10-10 09:05:02,089 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 05:05:23] 2025-10-10 09:05:02,090 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 05:05:23] 2025-10-10 09:05:02,090 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 05:05:23] 2025-10-10 09:05:02,090 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 05:05:23] 2025-10-10 09:05:02,090 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 05:05:23] 2025-10-10 09:05:02,090 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 05:05:23] 2025-10-10 09:05:02,090 | INFO     | job 6837376039 has completed (purged errors)
[2025-10-10 05:05:23] 2025-10-10 09:05:02,091 | INFO     | overall cleanup function is called
[2025-10-10 05:05:23] 2025-10-10 09:05:03,099 | INFO     | --- collectZombieJob: --- 10, [2148]
[2025-10-10 05:05:23] 2025-10-10 09:05:03,099 | INFO     | zombie collector waiting for pid 2148
[2025-10-10 05:05:23] 2025-10-10 09:05:03,099 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 05:05:23] 2025-10-10 09:05:03,099 | INFO     | collected zombie processes
[2025-10-10 05:05:23] 2025-10-10 09:05:03,099 | INFO     | will attempt to kill all subprocesses of pid=2148
[2025-10-10 05:05:23] 2025-10-10 09:05:03,197 | INFO     | process IDs to be killed: [2148] (in reverse order)
[2025-10-10 05:05:23] 2025-10-10 09:05:03,245 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 05:05:23] 2025-10-10 09:05:03,246 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 05:05:23] 2025-10-10 09:05:03,250 | INFO     | did not find any defunct processes belonging to 2148
[2025-10-10 05:05:23] 2025-10-10 09:05:03,253 | INFO     | did not find any defunct processes belonging to 2148
[2025-10-10 05:05:23] 2025-10-10 09:05:03,254 | INFO     | ready for new job
[2025-10-10 05:05:23] 2025-10-10 09:05:03,254 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 05:05:23] 2025-10-10 09:05:03,255 | INFO     | ***************************************
[2025-10-10 05:05:23] 2025-10-10 09:05:03,256 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 05:05:23] 2025-10-10 09:05:03,256 | INFO     | ***************************************
[2025-10-10 05:05:23] 2025-10-10 09:05:03,256 | INFO     | 
[2025-10-10 05:05:23] 2025-10-10 09:05:03,257 | INFO     | architecture information:
[2025-10-10 05:05:23] 2025-10-10 09:05:03,257 | INFO     | executing command: cat /etc/os-release
[2025-10-10 05:05:23] 2025-10-10 09:05:03,271 | INFO     | cat /etc/os-release:
[2025-10-10 05:05:23] NAME="CentOS Linux"
[2025-10-10 05:05:23] VERSION="7 (Core)"
[2025-10-10 05:05:23] ID="centos"
[2025-10-10 05:05:23] ID_LIKE="rhel fedora"
[2025-10-10 05:05:23] VERSION_ID="7"
[2025-10-10 05:05:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 05:05:23] ANSI_COLOR="0;31"
[2025-10-10 05:05:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 05:05:23] HOME_URL="https://www.centos.org/"
[2025-10-10 05:05:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 05:05:23] 
[2025-10-10 05:05:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 05:05:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 05:05:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 05:05:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 05:05:23] 
[2025-10-10 05:05:23] 2025-10-10 09:05:03,272 | INFO     | ***************************************
[2025-10-10 05:05:23] 2025-10-10 09:05:03,773 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 05:05:23] 2025-10-10 09:05:03,791 | INFO     | sufficient remaining disk space (29374808064 B)
[2025-10-10 05:05:23] 2025-10-10 09:05:03,791 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 05:05:23] 2025-10-10 09:05:03,792 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 05:05:23] 2025-10-10 09:05:03,792 | INFO     | update_server=False
[2025-10-10 05:05:23] 2025-10-10 09:05:03,792 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 05:05:23] 2025-10-10 09:05:03,792 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 05:05:23] 2025-10-10 09:05:03,793 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-10 05:05:23] 2025-10-10 09:05:03,793 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 05:05:23] 2025-10-10 09:05:03,793 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 05:05:23] 2025-10-10 09:05:03,793 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 05:05:23] 2025-10-10 09:05:03,874 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 05:05:23] 2025-10-10 09:05:04,055 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 05:05:23] 2025-10-10 09:05:04,056 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 05:05:23] 2025-10-10 09:05:04,056 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 05:05:23] 2025-10-10 09:05:04,056 | INFO     | will abort loop
[2025-10-10 05:05:23] 2025-10-10 09:05:04,337 | INFO     | all data control threads have been joined
[2025-10-10 05:05:23] 2025-10-10 09:05:04,607 | INFO     | all payload control threads have been joined
[2025-10-10 05:05:23] 2025-10-10 09:05:04,798 | INFO     | [job] retrieve thread has finished
[2025-10-10 05:05:23] 2025-10-10 09:05:04,798 | INFO     | all job control threads have been joined
[2025-10-10 05:05:23] 2025-10-10 09:05:04,799 | INFO     | [job] queue monitor thread has finished
[2025-10-10 05:05:23] 2025-10-10 09:05:04,838 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 05:05:23] 2025-10-10 09:05:04,843 | INFO     | [job] validate thread has finished
[2025-10-10 05:05:23] 2025-10-10 09:05:04,927 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 05:05:23] 2025-10-10 09:05:04,958 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 05:05:23] 2025-10-10 09:05:04,986 | INFO     | [payload] failed_post thread has finished
[2025-10-10 05:05:23] 2025-10-10 09:05:05,061 | INFO     | [job] job monitor thread has finished
[2025-10-10 05:05:23] 2025-10-10 09:05:05,183 | INFO     | [data] copytool_in thread has finished
[2025-10-10 05:05:23] 2025-10-10 09:05:05,343 | INFO     | [data] control thread has finished
[2025-10-10 05:05:23] 2025-10-10 09:05:05,610 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 05:05:23] 2025-10-10 09:05:05,613 | INFO     | [payload] control thread has finished
[2025-10-10 05:05:23] 2025-10-10 09:05:05,650 | INFO     | [payload] validate_post thread has finished
[2025-10-10 05:05:23] 2025-10-10 09:05:05,803 | INFO     | [job] control thread has finished
[2025-10-10 05:05:23] 2025-10-10 09:05:05,880 | INFO     | [data] copytool_out thread has finished
[2025-10-10 05:05:23] 2025-10-10 09:05:06,609 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 05:05:23] 2025-10-10 09:05:10,615 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 05:05:23] 2025-10-10 09:05:16,092 | INFO     | [monitor] cgroup control has ended
[2025-10-10 05:05:23] 2025-10-10 09:05:17,963 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139889803896640)>', '<ExcThread(monitor, started 139889081308928)>']
[2025-10-10 05:05:23] 2025-10-10 09:05:18,871 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 05:05:23] 2025-10-10 09:05:18,872 | INFO     | [monitor] control thread has ended
[2025-10-10 05:05:23] 2025-10-10 09:05:22,977 | INFO     | all workflow threads have been joined
[2025-10-10 05:05:23] 2025-10-10 09:05:22,977 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 05:05:23] 2025-10-10 09:05:22,978 | INFO     | traces error code: 0
[2025-10-10 05:05:23] 2025-10-10 09:05:22,978 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 05:05:23] 2025-10-10 09:05:23,083 [wrapper] ==== pilot stdout END ====
[2025-10-10 05:05:23] 2025-10-10 09:05:23,087 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 05:05:23] 2025-10-10 09:05:23,091 [wrapper] pilotpid: 28103
[2025-10-10 05:05:23] 2025-10-10 09:05:23,095 [wrapper] Pilot exit status: 0
[2025-10-10 05:05:23] 2025-10-10 09:05:23,111 [wrapper] pandaids: 6837376039
[2025-10-10 05:05:23] 2025-10-10 09:05:23,148 [wrapper] cleanup supervisor_pilot 11886 28104
[2025-10-10 05:05:23] 2025-10-10 09:05:23,152 [wrapper] Test setup, not cleaning
[2025-10-10 05:05:23] 2025-10-10 09:05:23,156 [wrapper] apfmon messages muted
[2025-10-10 05:05:23] 2025-10-10 09:05:23,160 [wrapper] ==== wrapper stdout END ====
[2025-10-10 05:05:23] 2025-10-10 09:05:23,164 [wrapper] ==== wrapper stderr END ====
[2025-10-10 05:05:23]  *** Error codes and diagnostics ***
[2025-10-10 05:05:23]     "exeErrorCode": 0,
[2025-10-10 05:05:23]     "exeErrorDiag": "",
[2025-10-10 05:05:23]     "pilotErrorCode": 0,
[2025-10-10 05:05:23]     "pilotErrorDiag": "",
[2025-10-10 05:05:23]  *** Listing of results directory ***
[2025-10-10 05:05:23] total 403852
[2025-10-10 05:05:23] -rw-r--r-- 1 boincer umatlas    557409 Oct  9 19:37 pilot3.tar.gz
[2025-10-10 05:05:23] -rwx------ 1 boincer umatlas     36292 Oct  9 19:38 runpilot2-wrapper.sh
[2025-10-10 05:05:23] -rw-r--r-- 1 boincer umatlas      5112 Oct  9 19:38 queuedata.json
[2025-10-10 05:05:23] -rw-r--r-- 1 boincer umatlas       100 Oct 10 03:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 05:05:23] -rwxr-xr-x 1 boincer umatlas      7986 Oct 10 03:53 run_atlas
[2025-10-10 05:05:23] -rw-r--r-- 1 boincer umatlas       105 Oct 10 03:53 job.xml
[2025-10-10 05:05:23] -rw-r--r-- 2 boincer umatlas 218781900 Oct 10 03:53 EVNT.46676267._001184.pool.root.1
[2025-10-10 05:05:23] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 03:53 start_atlas.sh
[2025-10-10 05:05:23] drwxrwx--x 2 boincer umatlas      4096 Oct 10 03:53 shared
[2025-10-10 05:05:23] -rw-r--r-- 2 boincer umatlas    569679 Oct 10 03:53 input.tar.gz
[2025-10-10 05:05:23] -rw-r--r-- 1 boincer umatlas         0 Oct 10 03:53 boinc_lockfile
[2025-10-10 05:05:23] -rw-r--r-- 1 boincer umatlas      2550 Oct 10 03:53 pandaJob.out
[2025-10-10 05:05:23] -rw------- 1 boincer umatlas    975454 Oct 10 03:54 agis_schedconf.cvmfs.json
[2025-10-10 05:05:23] -rw------- 1 boincer umatlas   1560580 Oct 10 03:54 agis_ddmendpoints.agis.ALL.json
[2025-10-10 05:05:23] drwx------ 5 boincer umatlas      4096 Oct 10 03:54 pilot3
[2025-10-10 05:05:23] -rw-r--r-- 1 boincer umatlas      5953 Oct 10 05:01 init_data.xml
[2025-10-10 05:05:23] -rw------- 1 boincer umatlas        95 Oct 10 05:04 pilot_heartbeat.json
[2025-10-10 05:05:23] -rw-r--r-- 1 boincer umatlas       529 Oct 10 05:04 boinc_task_state.xml
[2025-10-10 05:05:23] -rw------- 1 boincer umatlas 188869053 Oct 10 05:04 HITS.46676269._028221.pool.root.1
[2025-10-10 05:05:23] -rw------- 1 boincer umatlas      1048 Oct 10 05:04 memory_monitor_summary.json
[2025-10-10 05:05:23] -rw------- 1 boincer umatlas    373768 Oct 10 05:04 log.46676269._028221.job.log.tgz.1
[2025-10-10 05:05:23] -rw-r--r-- 1 boincer umatlas        27 Oct 10 05:05 wrapper_checkpoint.txt
[2025-10-10 05:05:23] -rw-r--r-- 1 boincer umatlas      8192 Oct 10 05:05 boinc_mmap_file
[2025-10-10 05:05:23] -rw------- 1 boincer umatlas      7855 Oct 10 05:05 heartbeat.json
[2025-10-10 05:05:23] -rw------- 1 boincer umatlas      4738 Oct 10 05:05 pilotlog.txt
[2025-10-10 05:05:23] -rw------- 1 boincer umatlas    618949 Oct 10 05:05 log.46676269._028221.job.log.1
[2025-10-10 05:05:23] -rw------- 1 boincer umatlas       357 Oct 10 05:05 output.list
[2025-10-10 05:05:23] -rw-r--r-- 1 boincer umatlas       620 Oct 10 05:05 runtime_log
[2025-10-10 05:05:23] -rw------- 1 boincer umatlas   1013760 Oct 10 05:05 result.tar.gz
[2025-10-10 05:05:23] -rw------- 1 boincer umatlas       659 Oct 10 05:05 vVyKDmlOFR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmLxOMDm8UWjan.diag
[2025-10-10 05:05:23] -rw-r--r-- 1 boincer umatlas      8705 Oct 10 05:05 runtime_log.err
[2025-10-10 05:05:23] -rw-r--r-- 1 boincer umatlas     21996 Oct 10 05:05 stderr.txt
[2025-10-10 05:05:23] HITS file was successfully produced:
[2025-10-10 05:05:23] -rw------- 1 boincer umatlas 188869053 Oct 10 05:04 shared/HITS.pool.root.1
[2025-10-10 05:05:23]  *** Contents of shared directory: ***
[2025-10-10 05:05:23] total 399672
[2025-10-10 05:05:23] -rw-r--r-- 2 boincer umatlas 218781900 Oct 10 03:53 ATLAS.root_0
[2025-10-10 05:05:23] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 03:53 start_atlas.sh
[2025-10-10 05:05:23] -rw-r--r-- 2 boincer umatlas    569679 Oct 10 03:53 input.tar.gz
[2025-10-10 05:05:23] -rw------- 1 boincer umatlas 188869053 Oct 10 05:04 HITS.pool.root.1
[2025-10-10 05:05:23] -rw------- 1 boincer umatlas   1013760 Oct 10 05:05 result.tar.gz
05:05:24 (24315): run_atlas exited; CPU time 44976.586563
05:05:24 (24315): called boinc_finish(0)

</stderr_txt>
]]>

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