Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:38:57 (1940361): wrapper (7.7.26015): starting
16:38:57 (1940361): wrapper: running run_atlas (--nthreads 3)
[2025-10-10 16:38:57] Arguments: --nthreads 3
[2025-10-10 16:38:57] Threads: 3
[2025-10-10 16:38:57] Checking for CVMFS
[2025-10-10 16:38:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 16:38:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 16:38:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 16:38:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 16:38:57] 2.9.2.0 1455317 1637 64552 151548 2 187 29645488 36864001 0 130560 0 1273887 99.991 49390 1023 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-10 16:38:57] CVMFS is ok
[2025-10-10 16:38:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 16:38:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 16:38:57] Further information can be found at the LHC@home message board.
[2025-10-10 16:38:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 16:38:57] Checking for apptainer binary...
[2025-10-10 16:38:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 16:38:57] Running /usr/bin/apptainer --version
[2025-10-10 16:38:57] apptainer version 1.4.1-1.1
[2025-10-10 16:38:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 16:38:57] magicA252a
[2025-10-10 16:38:57] apptainer works
[2025-10-10 16:38:57] Set ATHENA_PROC_NUMBER=3
[2025-10-10 16:38:57] Set ATHENA_CORE_NUMBER=3
[2025-10-10 16:38:57] Starting ATLAS job with PandaID=6837397520
[2025-10-10 16:38:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 16:42:28]  *** The last 200 lines of the pilot log: ***
[2025-10-10 16:42:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 16:42:28] 
[2025-10-10 16:42:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 16:42:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 16:42:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 16:42:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 16:42:28] 
[2025-10-10 16:42:28] 2025-10-10 14:41:57,975 | INFO     | ***************************************
[2025-10-10 16:42:28] 2025-10-10 14:41:58,478 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-10 16:42:28] 2025-10-10 14:41:58,492 | INFO     | sufficient remaining disk space (330825728000 B)
[2025-10-10 16:42:28] 2025-10-10 14:41:58,492 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 16:42:28] 2025-10-10 14:41:58,492 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 16:42:28] 2025-10-10 14:41:58,492 | INFO     | update_server=False
[2025-10-10 16:42:28] 2025-10-10 14:41:58,492 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 16:42:28] 2025-10-10 14:41:58,492 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 16:42:28] 2025-10-10 14:41:58,492 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 16:42:28] 2025-10-10 14:41:58,585 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 16:42:28] 2025-10-10 14:41:58,585 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 16:42:28] 2025-10-10 14:41:58,586 | INFO     | aborting loop
[2025-10-10 16:42:28] 2025-10-10 14:41:58,888 | INFO     | all job control threads have been joined
[2025-10-10 16:42:28] 2025-10-10 14:41:59,308 | INFO     | all data control threads have been joined
[2025-10-10 16:42:28] 2025-10-10 14:41:59,497 | INFO     | [job] retrieve thread has finished
[2025-10-10 16:42:28] 2025-10-10 14:41:59,498 | INFO     | [job] queue monitor thread has finished
[2025-10-10 16:42:28] 2025-10-10 14:41:59,513 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 16:42:28] 2025-10-10 14:41:59,592 | INFO     | [job] job monitor thread has finished
[2025-10-10 16:42:28] 2025-10-10 14:41:59,693 | INFO     | [data] copytool_in thread has finished
[2025-10-10 16:42:28] 2025-10-10 14:41:59,841 | INFO     | all payload control threads have been joined
[2025-10-10 16:42:28] 2025-10-10 14:41:59,894 | INFO     | [job] control thread has finished
[2025-10-10 16:42:28] 2025-10-10 14:42:00,314 | INFO     | [data] control thread has finished
[2025-10-10 16:42:28] 2025-10-10 14:42:00,331 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 16:42:28] 2025-10-10 14:42:00,497 | INFO     | [payload] validate_post thread has finished
[2025-10-10 16:42:28] 2025-10-10 14:42:00,498 | INFO     | [data] copytool_out thread has finished
[2025-10-10 16:42:28] 2025-10-10 14:42:00,628 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 16:42:28] 2025-10-10 14:42:00,846 | INFO     | [payload] control thread has finished
[2025-10-10 16:42:28] 2025-10-10 14:42:00,875 | INFO     | [job] validate thread has finished
[2025-10-10 16:42:28] 2025-10-10 14:42:00,957 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 16:42:28] 2025-10-10 14:42:01,031 | INFO     | [payload] failed_post thread has finished
[2025-10-10 16:42:28] 2025-10-10 14:42:02,592 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 16:42:28] 2025-10-10 14:42:08,164 | INFO     | [monitor] cgroup control has ended
[2025-10-10 16:42:28] 2025-10-10 14:42:09,078 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140478934353728)>', '<ExcThread(monitor, started 140478297134848)>']
[2025-10-10 16:42:28] 2025-10-10 14:42:14,104 | INFO     | all workflow threads have been joined
[2025-10-10 16:42:28] 2025-10-10 14:42:14,106 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 16:42:28] 2025-10-10 14:42:14,107 | INFO     | traces error code: 0
[2025-10-10 16:42:28] 2025-10-10 14:42:14,107 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 16:42:28] 2025-10-10 14:42:28,876 | INFO     | PID=1944086 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 16:42:28] 2025-10-10 14:42:28,876 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 16:42:28] 2025-10-10 14:42:28,876 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 16:42:28] 2025-10-10 14:42:28,876 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 16:42:28] 2025-10-10 14:42:28,876 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 16:42:28] 2025-10-10 14:42:28,876 | CRITICAL | thread 'MainThread' is not alive
[2025-10-10 16:42:28] 2025-10-10 14:42:28,876 | INFO     | [monitor] control thread has ended
[2025-10-10 16:42:28] 2025-10-10 14:42:28,918 [wrapper] ==== pilot stdout END ====
[2025-10-10 16:42:28] 2025-10-10 14:42:28,921 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 16:42:28] 2025-10-10 14:42:28,924 [wrapper] pilotpid: 1944086
[2025-10-10 16:42:28] 2025-10-10 14:42:28,927 [wrapper] Pilot exit status: 0
[2025-10-10 16:42:28] 2025-10-10 14:42:28,934 [wrapper] pandaids: 6837397520
[2025-10-10 16:42:28] 2025-10-10 14:42:28,951 [wrapper] cleanup supervisor_pilot 1944092 1944087
[2025-10-10 16:42:28] 2025-10-10 14:42:28,953 [wrapper] Test setup, not cleaning
[2025-10-10 16:42:28] 2025-10-10 14:42:28,956 [wrapper] apfmon messages muted
[2025-10-10 16:42:28] 2025-10-10 14:42:28,958 [wrapper] ==== wrapper stdout END ====
[2025-10-10 16:42:28] 2025-10-10 14:42:28,961 [wrapper] ==== wrapper stderr END ====
[2025-10-10 16:42:28]  *** Error codes and diagnostics ***
[2025-10-10 16:42:28]     "exeErrorCode": 65,
[2025-10-10 16:42:28]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-10 16:42:28]     "pilotErrorCode": 1305,
[2025-10-10 16:42:28]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-10 16:42:28]  *** Listing of results directory ***
[2025-10-10 16:42:29] total 218432
[2025-10-10 16:42:29] -rw-r--r-- 1 boinc boinc    557409 Oct 10 04:20 pilot3.tar.gz
[2025-10-10 16:42:29] -rwx------ 1 boinc boinc     36292 Oct 10 04:23 runpilot2-wrapper.sh
[2025-10-10 16:42:29] -rw-r--r-- 1 boinc boinc      5112 Oct 10 04:24 queuedata.json
[2025-10-10 16:42:29] -rw-r--r-- 1 boinc boinc       100 Oct 10 16:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 16:42:29] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 16:38 run_atlas
[2025-10-10 16:42:29] -rw-r--r-- 1 boinc boinc       105 Oct 10 16:38 job.xml
[2025-10-10 16:42:29] -rw-r--r-- 2 boinc boinc 219576157 Oct 10 16:38 EVNT.46676267._001248.pool.root.1
[2025-10-10 16:42:29] -rw-r--r-- 2 boinc boinc    569677 Oct 10 16:38 input.tar.gz
[2025-10-10 16:42:29] -rw-r--r-- 2 boinc boinc     15120 Oct 10 16:38 start_atlas.sh
[2025-10-10 16:42:29] drwxrwx--x 2 boinc boinc      4096 Oct 10 16:38 shared
[2025-10-10 16:42:29] -rw-r--r-- 1 boinc boinc         0 Oct 10 16:38 boinc_setup_complete
[2025-10-10 16:42:29] -rw-r--r-- 1 boinc boinc      6200 Oct 10 16:38 init_data.xml
[2025-10-10 16:42:29] -rw-r--r-- 1 boinc boinc         0 Oct 10 16:38 boinc_lockfile
[2025-10-10 16:42:29] -rw-r--r-- 1 boinc boinc      2549 Oct 10 16:38 pandaJob.out
[2025-10-10 16:42:29] -rw------- 1 boinc boinc    975525 Oct 10 16:39 agis_schedconf.cvmfs.json
[2025-10-10 16:42:29] -rw------- 1 boinc boinc   1560580 Oct 10 16:39 agis_ddmendpoints.agis.ALL.json
[2025-10-10 16:42:29] drwx------ 5 boinc boinc      4096 Oct 10 16:39 pilot3
[2025-10-10 16:42:29] -rw------- 1 boinc boinc       965 Oct 10 16:39 memory_monitor_summary.json
[2025-10-10 16:42:29] -rw------- 1 boinc boinc     21090 Oct 10 16:39 log.46676269._030600.job.log.tgz.1
[2025-10-10 16:42:29] -rw-r--r-- 1 boinc boinc       522 Oct 10 16:40 boinc_task_state.xml
[2025-10-10 16:42:29] -rw------- 1 boinc boinc      8361 Oct 10 16:41 heartbeat.json
[2025-10-10 16:42:29] -rw-r--r-- 1 boinc boinc      8192 Oct 10 16:42 boinc_mmap_file
[2025-10-10 16:42:29] -rw-r--r-- 1 boinc boinc        22 Oct 10 16:42 wrapper_checkpoint.txt
[2025-10-10 16:42:29] -rw------- 1 boinc boinc       817 Oct 10 16:42 pilotlog.txt
[2025-10-10 16:42:29] -rw------- 1 boinc boinc        95 Oct 10 16:42 pilot_heartbeat.json
[2025-10-10 16:42:29] -rw------- 1 boinc boinc     84195 Oct 10 16:42 log.46676269._030600.job.log.1
[2025-10-10 16:42:29] -rw------- 1 boinc boinc       188 Oct 10 16:42 output.list
[2025-10-10 16:42:29] -rw-r--r-- 1 boinc boinc       620 Oct 10 16:42 runtime_log
[2025-10-10 16:42:29] -rw------- 1 boinc boinc    122880 Oct 10 16:42 result.tar.gz
[2025-10-10 16:42:29] -rw-r--r-- 1 boinc boinc      8644 Oct 10 16:42 runtime_log.err
[2025-10-10 16:42:29] -rw------- 1 boinc boinc       651 Oct 10 16:42 jpaLDmhyHR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmX3bNDmdB1tHo.diag
[2025-10-10 16:42:29] -rw-r--r-- 1 boinc boinc      8604 Oct 10 16:42 stderr.txt
[2025-10-10 16:42:29] No HITS result produced
[2025-10-10 16:42:29]  *** Contents of shared directory: ***
[2025-10-10 16:42:29] total 215132
[2025-10-10 16:42:29] -rw-r--r-- 2 boinc boinc 219576157 Oct 10 16:38 ATLAS.root_0
[2025-10-10 16:42:29] -rw-r--r-- 2 boinc boinc    569677 Oct 10 16:38 input.tar.gz
[2025-10-10 16:42:29] -rw-r--r-- 2 boinc boinc     15120 Oct 10 16:38 start_atlas.sh
[2025-10-10 16:42:29] -rw------- 1 boinc boinc    122880 Oct 10 16:42 result.tar.gz
16:42:30 (1940361): run_atlas exited; CPU time 16.602037
16:42:30 (1940361): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN