Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
05:34:08 (922730): wrapper (7.7.26015): starting
05:34:08 (922730): wrapper: running run_atlas (--nthreads 4)
[2025-10-10 05:34:08] Arguments: --nthreads 4
[2025-10-10 05:34:08] Threads: 4
[2025-10-10 05:34:08] Checking for CVMFS
[2025-10-10 05:34:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 05:34:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 05:34:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 05:34:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 05:34:08] 2.11.5.0 2691367 1341 98996 151541 3 188 2588778 4096001 5760 130560 0 6730148 99.998 45304 2196 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-10 05:34:08] CVMFS is ok
[2025-10-10 05:34:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 05:34:08] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-10 05:34:08] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-10 05:34:08] Further information can be found at the LHC@home message board.
[2025-10-10 05:34:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 05:34:08] Checking for apptainer binary...
[2025-10-10 05:34:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 05:34:08] Running /usr/bin/apptainer --version
[2025-10-10 05:34:08] apptainer version 1.4.3
[2025-10-10 05:34:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 05:34:08] x32-linux3
[2025-10-10 05:34:08] apptainer works
[2025-10-10 05:34:08] Set ATHENA_PROC_NUMBER=4
[2025-10-10 05:34:08] Set ATHENA_CORE_NUMBER=4
[2025-10-10 05:34:08] Starting ATLAS job with PandaID=6837376006
[2025-10-10 05:34:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 07:35:33]  *** The last 200 lines of the pilot log: ***
[2025-10-10 07:35:33] 2025-10-10 11:34:47,962 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 07:35:33] 2025-10-10 11:34:47,963 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 07:35:33] 2025-10-10 11:34:47,963 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 07:35:33] 2025-10-10 11:34:47,964 | INFO     | fitting pss+swap vs Time
[2025-10-10 07:35:33] 2025-10-10 11:34:47,965 | INFO     | sum of square deviations: 522502820.0
[2025-10-10 07:35:33] 2025-10-10 11:34:47,965 | INFO     | sum of deviations: 462976091.99999905
[2025-10-10 07:35:33] 2025-10-10 11:34:47,965 | INFO     | mean x: 1760092476.0
[2025-10-10 07:35:33] 2025-10-10 11:34:47,965 | INFO     | mean y: 2284732.504201681
[2025-10-10 07:35:33] 2025-10-10 11:34:47,965 | INFO     | -- intersect: -1557287206.4512324
[2025-10-10 07:35:33] 2025-10-10 11:34:47,965 | INFO     | intersect: -1557287206.4512324
[2025-10-10 07:35:33] 2025-10-10 11:34:47,965 | INFO     | chi2: 1.916376087459248
[2025-10-10 07:35:33] 2025-10-10 11:34:47,966 | INFO     | sum of square deviations: 459366752.5
[2025-10-10 07:35:33] 2025-10-10 11:34:47,966 | INFO     | sum of deviations: 7654310317.000001
[2025-10-10 07:35:33] 2025-10-10 11:34:47,966 | INFO     | mean x: 1760092323.5
[2025-10-10 07:35:33] 2025-10-10 11:34:47,966 | INFO     | mean y: 2301493.8947368423
[2025-10-10 07:35:33] 2025-10-10 11:34:47,966 | INFO     | -- intersect: -29325665228.378124
[2025-10-10 07:35:33] 2025-10-10 11:34:47,966 | INFO     | intersect: -29325665228.378124
[2025-10-10 07:35:33] 2025-10-10 11:34:47,966 | INFO     | chi2: 1.1080873742375603
[2025-10-10 07:35:33] 2025-10-10 11:34:47,966 | INFO     | current chi2=1.1080873742375603 (change=42.17797949531532 %)
[2025-10-10 07:35:33] 2025-10-10 11:34:47,967 | INFO     | sum of square deviations: 401533110.0
[2025-10-10 07:35:33] 2025-10-10 11:34:47,967 | INFO     | sum of deviations: 7279665884.999998
[2025-10-10 07:35:33] 2025-10-10 11:34:47,967 | INFO     | mean x: 1760092171.0
[2025-10-10 07:35:33] 2025-10-10 11:34:47,967 | INFO     | mean y: 2300506.110091743
[2025-10-10 07:35:33] 2025-10-10 11:34:47,967 | INFO     | -- intersect: -31907603341.381542
[2025-10-10 07:35:33] 2025-10-10 11:34:47,967 | INFO     | intersect: -31907603341.381542
[2025-10-10 07:35:33] 2025-10-10 11:34:47,967 | INFO     | chi2: 1.109786175026431
[2025-10-10 07:35:33] 2025-10-10 11:34:47,968 | INFO     | current chi2=1.109786175026431 (change=-0.15330928123241525 %)
[2025-10-10 07:35:33] 2025-10-10 11:34:47,968 | INFO     | right removable region: 108
[2025-10-10 07:35:33] 2025-10-10 11:34:47,968 | INFO     | sum of square deviations: 459366752.5
[2025-10-10 07:35:33] 2025-10-10 11:34:47,968 | INFO     | sum of deviations: -10206916347.500002
[2025-10-10 07:35:33] 2025-10-10 11:34:47,968 | INFO     | mean x: 1760092628.5
[2025-10-10 07:35:33] 2025-10-10 11:34:47,968 | INFO     | mean y: 2309758.6578947366
[2025-10-10 07:35:33] 2025-10-10 11:34:47,968 | INFO     | -- intersect: 39110752250.8056
[2025-10-10 07:35:33] 2025-10-10 11:34:47,968 | INFO     | intersect: 39110752250.8056
[2025-10-10 07:35:33] 2025-10-10 11:34:47,969 | INFO     | chi2: 0.8448579348496865
[2025-10-10 07:35:33] 2025-10-10 11:34:47,969 | INFO     | current chi2=0.8448579348496865 (change=55.91377181241035 %)
[2025-10-10 07:35:33] 2025-10-10 11:34:47,969 | INFO     | sum of square deviations: 401533110.0
[2025-10-10 07:35:33] 2025-10-10 11:34:47,969 | INFO     | sum of deviations: -9660299282.0
[2025-10-10 07:35:33] 2025-10-10 11:34:47,969 | INFO     | mean x: 1760092781.0
[2025-10-10 07:35:33] 2025-10-10 11:34:47,969 | INFO     | mean y: 2308306.6146788993
[2025-10-10 07:35:33] 2025-10-10 11:34:47,969 | INFO     | -- intersect: 42347566032.8024
[2025-10-10 07:35:33] 2025-10-10 11:34:47,969 | INFO     | intersect: 42347566032.8024
[2025-10-10 07:35:33] 2025-10-10 11:34:47,969 | INFO     | chi2: 0.8457599111035596
[2025-10-10 07:35:33] 2025-10-10 11:34:47,970 | INFO     | current chi2=0.8457599111035596 (change=-0.10676070102053212 %)
[2025-10-10 07:35:33] 2025-10-10 11:34:47,970 | INFO     | left removable region: 20
[2025-10-10 07:35:33] 2025-10-10 11:34:47,970 | INFO     | sum of square deviations: 211285822.0
[2025-10-10 07:35:33] 2025-10-10 11:34:47,970 | INFO     | sum of deviations: -1675364450.9999998
[2025-10-10 07:35:33] 2025-10-10 11:34:47,970 | INFO     | mean x: 1760092750.5
[2025-10-10 07:35:33] 2025-10-10 11:34:47,970 | INFO     | mean y: 2324748.0454545454
[2025-10-10 07:35:33] 2025-10-10 11:34:47,970 | INFO     | -- intersect: 13958759669.885653
[2025-10-10 07:35:33] 2025-10-10 11:34:47,970 | INFO     | intersect: 13958759669.885653
[2025-10-10 07:35:33] 2025-10-10 11:34:47,970 | INFO     | chi2: 0.005752151773602029
[2025-10-10 07:35:33] 2025-10-10 11:34:47,971 | INFO     | -- intersect: 13958759669.885653
[2025-10-10 07:35:33] 2025-10-10 11:34:47,971 | INFO     | current memory leak: -7.93 B/s (using 88 data points, chi2=0.01)
[2025-10-10 07:35:33] 2025-10-10 11:34:47,971 | INFO     | could have reported an average CPU frequency of 3658 MHz (7 samples)
[2025-10-10 07:35:33] 2025-10-10 11:34:47,971 | INFO     | ..............................
[2025-10-10 07:35:33] 2025-10-10 11:34:47,971 | INFO     | . Timing measurements:
[2025-10-10 07:35:33] 2025-10-10 11:34:47,971 | INFO     | . get job = 0 s
[2025-10-10 07:35:33] 2025-10-10 11:34:47,971 | INFO     | . initial setup = 2 s
[2025-10-10 07:35:33] 2025-10-10 11:34:47,971 | INFO     | . payload setup = 3 s
[2025-10-10 07:35:33] 2025-10-10 11:34:47,971 | INFO     | . stage-in = 0 s
[2025-10-10 07:35:33] 2025-10-10 11:34:47,971 | INFO     | . payload execution = 7204 s
[2025-10-10 07:35:33] 2025-10-10 11:34:47,971 | INFO     | . stage-out = 0 s
[2025-10-10 07:35:33] 2025-10-10 11:34:47,971 | INFO     | . log creation = 0 s
[2025-10-10 07:35:33] 2025-10-10 11:34:47,971 | INFO     | ..............................
[2025-10-10 07:35:33] 2025-10-10 11:34:48,036 | INFO     | 
[2025-10-10 07:35:33] 2025-10-10 11:34:48,036 | INFO     | job summary report
[2025-10-10 07:35:33] 2025-10-10 11:34:48,036 | INFO     | --------------------------------------------------
[2025-10-10 07:35:33] 2025-10-10 11:34:48,036 | INFO     | PanDA job id: 6837376006
[2025-10-10 07:35:33] 2025-10-10 11:34:48,037 | INFO     | task id: 46676269
[2025-10-10 07:35:33] 2025-10-10 11:34:48,037 | INFO     | errors: (none)
[2025-10-10 07:35:33] 2025-10-10 11:34:48,037 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 07:35:33] 2025-10-10 11:34:48,037 | INFO     | pilot state: finished 
[2025-10-10 07:35:33] 2025-10-10 11:34:48,037 | INFO     | transexitcode: 0
[2025-10-10 07:35:33] 2025-10-10 11:34:48,037 | INFO     | exeerrorcode: 0
[2025-10-10 07:35:33] 2025-10-10 11:34:48,037 | INFO     | exeerrordiag: 
[2025-10-10 07:35:33] 2025-10-10 11:34:48,037 | INFO     | exitcode: 0
[2025-10-10 07:35:33] 2025-10-10 11:34:48,037 | INFO     | exitmsg: OK
[2025-10-10 07:35:33] 2025-10-10 11:34:48,037 | INFO     | cpuconsumptiontime: 27794 s
[2025-10-10 07:35:33] 2025-10-10 11:34:48,037 | INFO     | nevents: 400
[2025-10-10 07:35:33] 2025-10-10 11:34:48,037 | INFO     | neventsw: 0
[2025-10-10 07:35:33] 2025-10-10 11:34:48,037 | INFO     | pid: 933362
[2025-10-10 07:35:33] 2025-10-10 11:34:48,037 | INFO     | pgrp: 933362
[2025-10-10 07:35:33] 2025-10-10 11:34:48,037 | INFO     | corecount: 4
[2025-10-10 07:35:33] 2025-10-10 11:34:48,037 | INFO     | event service: False
[2025-10-10 07:35:33] 2025-10-10 11:34:48,037 | INFO     | sizes: {0: 2348029, 1: 2348892, 4: 2349154, 11: 2349182, 7211: 2376575, 7212: 2385770, 7218: 2385908}
[2025-10-10 07:35:33] 2025-10-10 11:34:48,037 | INFO     | --------------------------------------------------
[2025-10-10 07:35:33] 2025-10-10 11:34:48,038 | INFO     | 
[2025-10-10 07:35:33] 2025-10-10 11:34:48,038 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-10 07:35:33] 2025-10-10 11:34:48,052 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 07:35:33] 2025-10-10 11:34:48,052 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 07:35:33] 2025-10-10 11:34:48,052 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 07:35:33] 2025-10-10 11:34:48,052 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 07:35:33] 2025-10-10 11:34:48,052 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 07:35:33] 2025-10-10 11:34:48,052 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 07:35:33] 2025-10-10 11:34:48,052 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 07:35:33] 2025-10-10 11:34:48,052 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 07:35:33] 2025-10-10 11:34:48,052 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 07:35:33] 2025-10-10 11:34:48,052 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 07:35:33] 2025-10-10 11:34:48,053 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 07:35:33] 2025-10-10 11:34:48,053 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 07:35:33] 2025-10-10 11:34:48,053 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 07:35:33] 2025-10-10 11:34:48,053 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 07:35:33] 2025-10-10 11:34:48,053 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 07:35:33] 2025-10-10 11:34:48,053 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 07:35:33] 2025-10-10 11:34:48,053 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 07:35:33] 2025-10-10 11:34:48,053 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 07:35:33] 2025-10-10 11:34:48,053 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 07:35:33] 2025-10-10 11:34:48,053 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 07:35:33] 2025-10-10 11:34:48,053 | INFO     | job 6837376006 has completed (purged errors)
[2025-10-10 07:35:33] 2025-10-10 11:34:48,053 | INFO     | overall cleanup function is called
[2025-10-10 07:35:33] 2025-10-10 11:34:49,061 | INFO     | --- collectZombieJob: --- 10, [933362]
[2025-10-10 07:35:33] 2025-10-10 11:34:49,061 | INFO     | zombie collector waiting for pid 933362
[2025-10-10 07:35:33] 2025-10-10 11:34:49,061 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 07:35:33] 2025-10-10 11:34:49,061 | INFO     | collected zombie processes
[2025-10-10 07:35:33] 2025-10-10 11:34:49,061 | INFO     | will attempt to kill all subprocesses of pid=933362
[2025-10-10 07:35:33] 2025-10-10 11:34:49,194 | INFO     | process IDs to be killed: [933362] (in reverse order)
[2025-10-10 07:35:33] 2025-10-10 11:34:49,243 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 07:35:33] 2025-10-10 11:34:49,243 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 07:35:33] 2025-10-10 11:34:49,247 | INFO     | did not find any defunct processes belonging to 933362
[2025-10-10 07:35:33] 2025-10-10 11:34:49,250 | INFO     | did not find any defunct processes belonging to 933362
[2025-10-10 07:35:33] 2025-10-10 11:34:49,250 | INFO     | ready for new job
[2025-10-10 07:35:33] 2025-10-10 11:34:49,251 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 07:35:33] 2025-10-10 11:34:49,252 | INFO     | ***************************************
[2025-10-10 07:35:33] 2025-10-10 11:34:49,252 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 07:35:33] 2025-10-10 11:34:49,252 | INFO     | ***************************************
[2025-10-10 07:35:33] 2025-10-10 11:34:49,252 | INFO     | 
[2025-10-10 07:35:33] 2025-10-10 11:34:49,274 | INFO     | architecture information:
[2025-10-10 07:35:33] 2025-10-10 11:34:49,274 | INFO     | executing command: cat /etc/os-release
[2025-10-10 07:35:33] 2025-10-10 11:34:49,285 | INFO     | cat /etc/os-release:
[2025-10-10 07:35:33] NAME="CentOS Linux"
[2025-10-10 07:35:33] VERSION="7 (Core)"
[2025-10-10 07:35:33] ID="centos"
[2025-10-10 07:35:33] ID_LIKE="rhel fedora"
[2025-10-10 07:35:33] VERSION_ID="7"
[2025-10-10 07:35:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 07:35:33] ANSI_COLOR="0;31"
[2025-10-10 07:35:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 07:35:33] HOME_URL="https://www.centos.org/"
[2025-10-10 07:35:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 07:35:33] 
[2025-10-10 07:35:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 07:35:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 07:35:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 07:35:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 07:35:33] 
[2025-10-10 07:35:33] 2025-10-10 11:34:49,285 | INFO     | ***************************************
[2025-10-10 07:35:33] 2025-10-10 11:34:49,788 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-10 07:35:33] 2025-10-10 11:34:49,799 | INFO     | sufficient remaining disk space (396991922176 B)
[2025-10-10 07:35:33] 2025-10-10 11:34:49,800 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 07:35:33] 2025-10-10 11:34:49,800 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 07:35:33] 2025-10-10 11:34:49,800 | INFO     | update_server=False
[2025-10-10 07:35:33] 2025-10-10 11:34:49,800 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 07:35:33] 2025-10-10 11:34:49,800 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 07:35:33] 2025-10-10 11:34:49,800 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 07:35:33] 2025-10-10 11:34:49,801 | INFO     | aborting loop
[2025-10-10 07:35:33] 2025-10-10 11:34:49,937 | INFO     | all data control threads have been joined
[2025-10-10 07:35:33] 2025-10-10 11:34:50,046 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 07:35:33] 2025-10-10 11:34:50,337 | INFO     | all payload control threads have been joined
[2025-10-10 07:35:33] 2025-10-10 11:34:50,474 | INFO     | all job control threads have been joined
[2025-10-10 07:35:33] 2025-10-10 11:34:50,803 | INFO     | [job] queue monitor thread has finished
[2025-10-10 07:35:33] 2025-10-10 11:34:50,804 | INFO     | [job] job monitor thread has finished
[2025-10-10 07:35:33] 2025-10-10 11:34:50,805 | INFO     | [job] retrieve thread has finished
[2025-10-10 07:35:33] 2025-10-10 11:34:50,819 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 07:35:33] 2025-10-10 11:34:50,940 | INFO     | [data] control thread has finished
[2025-10-10 07:35:33] 2025-10-10 11:34:51,176 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 07:35:33] 2025-10-10 11:34:51,341 | INFO     | [payload] control thread has finished
[2025-10-10 07:35:33] 2025-10-10 11:34:51,476 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 07:35:33] 2025-10-10 11:34:51,479 | INFO     | [job] control thread has finished
[2025-10-10 07:35:33] 2025-10-10 11:34:51,660 | INFO     | [payload] failed_post thread has finished
[2025-10-10 07:35:33] 2025-10-10 11:34:51,676 | INFO     | [job] validate thread has finished
[2025-10-10 07:35:33] 2025-10-10 11:34:51,692 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 07:35:33] 2025-10-10 11:34:51,744 | INFO     | [data] copytool_in thread has finished
[2025-10-10 07:35:33] 2025-10-10 11:34:51,827 | INFO     | [payload] validate_post thread has finished
[2025-10-10 07:35:33] 2025-10-10 11:34:52,051 | INFO     | [data] copytool_out thread has finished
[2025-10-10 07:35:33] 2025-10-10 11:34:52,606 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 07:35:33] 2025-10-10 11:34:56,607 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 07:35:33] 2025-10-10 11:35:20,218 | INFO     | PID=926651 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 07:35:33] 2025-10-10 11:35:20,218 | INFO     | .. there are 8 such processes running
[2025-10-10 07:35:33] 2025-10-10 11:35:20,225 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 07:35:33] 2025-10-10 11:35:20,225 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 07:35:33] 2025-10-10 11:35:20,225 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 07:35:33] 2025-10-10 11:35:27,848 | INFO     | [monitor] cgroup control has ended
[2025-10-10 07:35:33] 2025-10-10 11:35:28,660 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139800867190592)>', '<ExcThread(monitor, started 139800422106880)>']
[2025-10-10 07:35:33] 2025-10-10 11:35:29,260 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 07:35:33] 2025-10-10 11:35:29,260 | INFO     | [monitor] control thread has ended
[2025-10-10 07:35:33] 2025-10-10 11:35:33,688 | INFO     | all workflow threads have been joined
[2025-10-10 07:35:33] 2025-10-10 11:35:33,688 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 07:35:33] 2025-10-10 11:35:33,688 | INFO     | traces error code: 0
[2025-10-10 07:35:33] 2025-10-10 11:35:33,688 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 07:35:33] 2025-10-10 11:35:33,768 [wrapper] ==== pilot stdout END ====
[2025-10-10 07:35:33] 2025-10-10 11:35:33,770 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 07:35:33] 2025-10-10 11:35:33,772 [wrapper] pilotpid: 926651
[2025-10-10 07:35:33] 2025-10-10 11:35:33,775 [wrapper] Pilot exit status: 0
[2025-10-10 07:35:33] 2025-10-10 11:35:33,782 [wrapper] pandaids: 6837376006
[2025-10-10 07:35:33] 2025-10-10 11:35:33,815 [wrapper] cleanup supervisor_pilot 1117445 926652
[2025-10-10 07:35:33] 2025-10-10 11:35:33,817 [wrapper] Test setup, not cleaning
[2025-10-10 07:35:33] 2025-10-10 11:35:33,819 [wrapper] apfmon messages muted
[2025-10-10 07:35:33] 2025-10-10 11:35:33,821 [wrapper] ==== wrapper stdout END ====
[2025-10-10 07:35:33] 2025-10-10 11:35:33,823 [wrapper] ==== wrapper stderr END ====
[2025-10-10 07:35:33]  *** Error codes and diagnostics ***
[2025-10-10 07:35:33]     "exeErrorCode": 0,
[2025-10-10 07:35:33]     "exeErrorDiag": "",
[2025-10-10 07:35:33]     "pilotErrorCode": 0,
[2025-10-10 07:35:33]     "pilotErrorDiag": "",
[2025-10-10 07:35:33]  *** Listing of results directory ***
[2025-10-10 07:35:33] total 407844
[2025-10-10 07:35:33] -rw-r--r-- 1 boinc boinc    557409 Oct  9 19:26 pilot3.tar.gz
[2025-10-10 07:35:33] -rw-r--r-- 1 boinc boinc      5112 Oct  9 19:33 queuedata.json
[2025-10-10 07:35:33] -rwx------ 1 boinc boinc     36292 Oct  9 19:34 runpilot2-wrapper.sh
[2025-10-10 07:35:33] -rw-r--r-- 1 boinc boinc       100 Oct 10 05:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 07:35:33] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 05:34 run_atlas
[2025-10-10 07:35:33] -rw-r--r-- 1 boinc boinc       105 Oct 10 05:34 job.xml
[2025-10-10 07:35:33] -rw-r--r-- 2 boinc boinc 218558333 Oct 10 05:34 EVNT.46676267._001182.pool.root.1
[2025-10-10 07:35:33] -rw-r--r-- 2 boinc boinc     15120 Oct 10 05:34 start_atlas.sh
[2025-10-10 07:35:33] drwxrwx--x 2 boinc boinc      4096 Oct 10 05:34 shared
[2025-10-10 07:35:33] -rw-r--r-- 2 boinc boinc    569678 Oct 10 05:34 input.tar.gz
[2025-10-10 07:35:33] -rw-r--r-- 1 boinc boinc      9157 Oct 10 05:34 init_data.xml
[2025-10-10 07:35:33] -rw-r--r-- 1 boinc boinc         0 Oct 10 05:34 boinc_setup_complete
[2025-10-10 07:35:33] -rw-r--r-- 1 boinc boinc         0 Oct 10 05:34 boinc_lockfile
[2025-10-10 07:35:33] -rw-r--r-- 1 boinc boinc      2550 Oct 10 05:34 pandaJob.out
[2025-10-10 07:35:33] -rw------- 1 boinc boinc    975511 Oct 10 05:34 agis_schedconf.cvmfs.json
[2025-10-10 07:35:33] -rw------- 1 boinc boinc   1560580 Oct 10 05:34 agis_ddmendpoints.agis.ALL.json
[2025-10-10 07:35:33] drwx------ 5 boinc boinc      4096 Oct 10 05:34 pilot3
[2025-10-10 07:35:33] -rw------- 1 boinc boinc 192457396 Oct 10 07:34 HITS.46676269._028188.pool.root.1
[2025-10-10 07:35:33] -rw-r--r-- 1 boinc boinc       530 Oct 10 07:34 boinc_task_state.xml
[2025-10-10 07:35:33] -rw------- 1 boinc boinc      1037 Oct 10 07:34 memory_monitor_summary.json
[2025-10-10 07:35:33] -rw------- 1 boinc boinc    311684 Oct 10 07:34 log.46676269._028188.job.log.tgz.1
[2025-10-10 07:35:33] -rw------- 1 boinc boinc      7748 Oct 10 07:34 heartbeat.json
[2025-10-10 07:35:33] -rw-r--r-- 1 boinc boinc      8192 Oct 10 07:35 boinc_mmap_file
[2025-10-10 07:35:33] -rw-r--r-- 1 boinc boinc        27 Oct 10 07:35 wrapper_checkpoint.txt
[2025-10-10 07:35:33] -rw------- 1 boinc boinc        95 Oct 10 07:35 pilot_heartbeat.json
[2025-10-10 07:35:33] -rw------- 1 boinc boinc      4830 Oct 10 07:35 pilotlog.txt
[2025-10-10 07:35:33] -rw------- 1 boinc boinc   1042767 Oct 10 07:35 log.46676269._028188.job.log.1
[2025-10-10 07:35:33] -rw------- 1 boinc boinc       357 Oct 10 07:35 output.list
[2025-10-10 07:35:33] -rw-r--r-- 1 boinc boinc       620 Oct 10 07:35 runtime_log
[2025-10-10 07:35:33] -rw------- 1 boinc boinc   1372160 Oct 10 07:35 result.tar.gz
[2025-10-10 07:35:33] -rw-r--r-- 1 boinc boinc      8764 Oct 10 07:35 runtime_log.err
[2025-10-10 07:35:33] -rw------- 1 boinc boinc       644 Oct 10 07:35 7XTLDm1KFR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm1wOMDmtouWFm.diag
[2025-10-10 07:35:33] -rw-r--r-- 1 boinc boinc     20942 Oct 10 07:35 stderr.txt
[2025-10-10 07:35:33] HITS file was successfully produced:
[2025-10-10 07:35:33] -rw------- 1 boinc boinc 192457396 Oct 10 07:34 shared/HITS.pool.root.1
[2025-10-10 07:35:33]  *** Contents of shared directory: ***
[2025-10-10 07:35:33] total 403308
[2025-10-10 07:35:33] -rw-r--r-- 2 boinc boinc 218558333 Oct 10 05:34 ATLAS.root_0
[2025-10-10 07:35:33] -rw-r--r-- 2 boinc boinc     15120 Oct 10 05:34 start_atlas.sh
[2025-10-10 07:35:33] -rw-r--r-- 2 boinc boinc    569678 Oct 10 05:34 input.tar.gz
[2025-10-10 07:35:33] -rw------- 1 boinc boinc 192457396 Oct 10 07:34 HITS.pool.root.1
[2025-10-10 07:35:33] -rw------- 1 boinc boinc   1372160 Oct 10 07:35 result.tar.gz
07:35:35 (922730): run_atlas exited; CPU time 27876.376010
07:35:35 (922730): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN