Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:19:11 (3366436): wrapper (7.7.26015): starting
02:19:11 (3366436): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 02:19:11] Arguments: --nthreads 4
[2025-10-11 02:19:11] Threads: 4
[2025-10-11 02:19:11] Checking for CVMFS
[2025-10-11 02:19:11] No cvmfs_config command found, will try listing directly
[2025-10-11 02:19:11] CVMFS is ok
[2025-10-11 02:19:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 02:19:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 02:19:11] Further information can be found at the LHC@home message board.
[2025-10-11 02:19:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 02:19:11] Checking for apptainer binary...
[2025-10-11 02:19:11] which: no apptainer in ((null))
[2025-10-11 02:19:11] apptainer is not installed, using version from CVMFS
[2025-10-11 02:19:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 02:19:11] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-10-11 02:19:11] apptainer works
[2025-10-11 02:19:11] Set ATHENA_PROC_NUMBER=4
[2025-10-11 02:19:11] Set ATHENA_CORE_NUMBER=4
[2025-10-11 02:19:11] Starting ATLAS job with PandaID=6837378863
[2025-10-11 02:19:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 05:10:10]  *** The last 200 lines of the pilot log: ***
[2025-10-11 05:10:10] 2025-10-11 03:04:11,797 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 05:10:10] 2025-10-11 03:04:11,800 | INFO     | fitting pss+swap vs Time
[2025-10-11 05:10:10] 2025-10-11 03:04:11,801 | INFO     | sum of square deviations: 1318277740.5
[2025-10-11 05:10:10] 2025-10-11 03:04:11,802 | INFO     | sum of deviations: 996368571.0
[2025-10-11 05:10:10] 2025-10-11 03:04:11,802 | INFO     | mean x: 1760146913.5
[2025-10-11 05:10:10] 2025-10-11 03:04:11,802 | INFO     | mean y: 2312558.3950617285
[2025-10-11 05:10:10] 2025-10-11 03:04:11,802 | INFO     | -- intersect: -1328025511.5543606
[2025-10-11 05:10:10] 2025-10-11 03:04:11,802 | INFO     | intersect: -1328025511.5543606
[2025-10-11 05:10:10] 2025-10-11 03:04:11,806 | INFO     | chi2: 2.1600346169428195
[2025-10-11 05:10:10] 2025-10-11 03:04:11,806 | INFO     | sum of square deviations: 1199940638.0
[2025-10-11 05:10:10] 2025-10-11 03:04:11,807 | INFO     | sum of deviations: 11152080573.000002
[2025-10-11 05:10:10] 2025-10-11 03:04:11,807 | INFO     | mean x: 1760146761.0
[2025-10-11 05:10:10] 2025-10-11 03:04:11,807 | INFO     | mean y: 2325317.713375796
[2025-10-11 05:10:10] 2025-10-11 03:04:11,807 | INFO     | -- intersect: -16356232662.033102
[2025-10-11 05:10:10] 2025-10-11 03:04:11,807 | INFO     | intersect: -16356232662.033102
[2025-10-11 05:10:10] 2025-10-11 03:04:11,808 | INFO     | chi2: 1.3513065278142589
[2025-10-11 05:10:10] 2025-10-11 03:04:11,808 | INFO     | current chi2=1.3513065278142589 (change=37.440515202167674 %)
[2025-10-11 05:10:10] 2025-10-11 03:04:11,808 | INFO     | sum of square deviations: 1088905998.0
[2025-10-11 05:10:10] 2025-10-11 03:04:11,809 | INFO     | sum of deviations: 10951821232.999996
[2025-10-11 05:10:10] 2025-10-11 03:04:11,809 | INFO     | mean x: 1760146608.5
[2025-10-11 05:10:10] 2025-10-11 03:04:11,809 | INFO     | mean y: 2325042.5789473685
[2025-10-11 05:10:10] 2025-10-11 03:04:11,809 | INFO     | -- intersect: -17700590576.9227
[2025-10-11 05:10:10] 2025-10-11 03:04:11,809 | INFO     | intersect: -17700590576.9227
[2025-10-11 05:10:10] 2025-10-11 03:04:11,809 | INFO     | chi2: 1.3526263207689566
[2025-10-11 05:10:10] 2025-10-11 03:04:11,810 | INFO     | current chi2=1.3526263207689566 (change=-0.0976679182355849 %)
[2025-10-11 05:10:10] 2025-10-11 03:04:11,810 | INFO     | right removable region: 151
[2025-10-11 05:10:10] 2025-10-11 03:04:11,810 | INFO     | sum of square deviations: 1199940638.0
[2025-10-11 05:10:10] 2025-10-11 03:04:11,811 | INFO     | sum of deviations: -18836225685.0
[2025-10-11 05:10:10] 2025-10-11 03:04:11,811 | INFO     | mean x: 1760147066.0
[2025-10-11 05:10:10] 2025-10-11 03:04:11,811 | INFO     | mean y: 2337677.7643312104
[2025-10-11 05:10:10] 2025-10-11 03:04:11,811 | INFO     | -- intersect: 27632477306.36035
[2025-10-11 05:10:10] 2025-10-11 03:04:11,811 | INFO     | intersect: 27632477306.36035
[2025-10-11 05:10:10] 2025-10-11 03:04:11,811 | INFO     | chi2: 0.8462114325923206
[2025-10-11 05:10:10] 2025-10-11 03:04:11,811 | INFO     | current chi2=0.8462114325923206 (change=60.82417263339991 %)
[2025-10-11 05:10:10] 2025-10-11 03:04:11,812 | INFO     | sum of square deviations: 1088905998.0
[2025-10-11 05:10:10] 2025-10-11 03:04:11,813 | INFO     | sum of deviations: -18359955070.0
[2025-10-11 05:10:10] 2025-10-11 03:04:11,813 | INFO     | mean x: 1760147218.5
[2025-10-11 05:10:10] 2025-10-11 03:04:11,813 | INFO     | mean y: 2337018.3421052634
[2025-10-11 05:10:10] 2025-10-11 03:04:11,813 | INFO     | -- intersect: 29680035467.61217
[2025-10-11 05:10:10] 2025-10-11 03:04:11,813 | INFO     | intersect: 29680035467.61217
[2025-10-11 05:10:10] 2025-10-11 03:04:11,813 | INFO     | chi2: 0.845903935512504
[2025-10-11 05:10:10] 2025-10-11 03:04:11,813 | INFO     | current chi2=0.845903935512504 (change=0.0363380909277706 %)
[2025-10-11 05:10:10] 2025-10-11 03:04:11,813 | INFO     | left removable region: 20
[2025-10-11 05:10:10] 2025-10-11 03:04:11,814 | INFO     | sum of square deviations: 697054930.0
[2025-10-11 05:10:10] 2025-10-11 03:04:11,814 | INFO     | sum of deviations: -6310227167.000001
[2025-10-11 05:10:10] 2025-10-11 03:04:11,814 | INFO     | mean x: 1760147188.0
[2025-10-11 05:10:10] 2025-10-11 03:04:11,814 | INFO     | mean y: 2349628.763358779
[2025-10-11 05:10:10] 2025-10-11 03:04:11,815 | INFO     | -- intersect: 15936429032.858898
[2025-10-11 05:10:10] 2025-10-11 03:04:11,815 | INFO     | intersect: 15936429032.858898
[2025-10-11 05:10:10] 2025-10-11 03:04:11,815 | INFO     | chi2: 0.009962198400902804
[2025-10-11 05:10:10] 2025-10-11 03:04:11,815 | INFO     | -- intersect: 15936429032.858898
[2025-10-11 05:10:10] 2025-10-11 03:04:11,815 | INFO     | current memory leak: -9.05 B/s (using 131 data points, chi2=0.01)
[2025-10-11 05:10:10] 2025-10-11 03:04:11,815 | INFO     | could have reported an average CPU frequency of 2699 MHz (9 samples)
[2025-10-11 05:10:10] 2025-10-11 03:04:11,816 | INFO     | ..............................
[2025-10-11 05:10:10] 2025-10-11 03:04:11,816 | INFO     | . Timing measurements:
[2025-10-11 05:10:10] 2025-10-11 03:04:11,816 | INFO     | . get job = 0 s
[2025-10-11 05:10:10] 2025-10-11 03:04:11,816 | INFO     | . initial setup = 1 s
[2025-10-11 05:10:10] 2025-10-11 03:04:11,816 | INFO     | . payload setup = 9 s
[2025-10-11 05:10:10] 2025-10-11 03:04:11,816 | INFO     | . stage-in = 0 s
[2025-10-11 05:10:10] 2025-10-11 03:04:11,816 | INFO     | . payload execution = 9842 s
[2025-10-11 05:10:10] 2025-10-11 03:04:11,816 | INFO     | . stage-out = 0 s
[2025-10-11 05:10:10] 2025-10-11 03:04:11,816 | INFO     | . log creation = 0 s
[2025-10-11 05:10:10] 2025-10-11 03:04:11,816 | INFO     | ..............................
[2025-10-11 05:10:10] 2025-10-11 03:04:11,914 | INFO     | 
[2025-10-11 05:10:10] 2025-10-11 03:04:11,915 | INFO     | job summary report
[2025-10-11 05:10:10] 2025-10-11 03:04:11,915 | INFO     | --------------------------------------------------
[2025-10-11 05:10:10] 2025-10-11 03:04:11,915 | INFO     | PanDA job id: 6837378863
[2025-10-11 05:10:10] 2025-10-11 03:04:11,915 | INFO     | task id: 46676269
[2025-10-11 05:10:10] 2025-10-11 03:04:11,916 | INFO     | errors: (none)
[2025-10-11 05:10:10] 2025-10-11 03:04:11,916 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 05:10:10] 2025-10-11 03:04:11,916 | INFO     | pilot state: finished 
[2025-10-11 05:10:10] 2025-10-11 03:04:11,916 | INFO     | transexitcode: 0
[2025-10-11 05:10:10] 2025-10-11 03:04:11,916 | INFO     | exeerrorcode: 0
[2025-10-11 05:10:10] 2025-10-11 03:04:11,916 | INFO     | exeerrordiag: 
[2025-10-11 05:10:10] 2025-10-11 03:04:11,916 | INFO     | exitcode: 0
[2025-10-11 05:10:10] 2025-10-11 03:04:11,916 | INFO     | exitmsg: OK
[2025-10-11 05:10:10] 2025-10-11 03:04:11,916 | INFO     | cpuconsumptiontime: 38516 s
[2025-10-11 05:10:10] 2025-10-11 03:04:11,916 | INFO     | nevents: 400
[2025-10-11 05:10:10] 2025-10-11 03:04:11,916 | INFO     | neventsw: 0
[2025-10-11 05:10:10] 2025-10-11 03:04:11,916 | INFO     | pid: 3439411
[2025-10-11 05:10:10] 2025-10-11 03:04:11,916 | INFO     | pgrp: 3439411
[2025-10-11 05:10:10] 2025-10-11 03:04:11,916 | INFO     | corecount: 4
[2025-10-11 05:10:10] 2025-10-11 03:04:11,917 | INFO     | event service: False
[2025-10-11 05:10:10] 2025-10-11 03:04:11,917 | INFO     | sizes: {0: 2348697, 1: 2348896, 8: 2349158, 11: 2349186, 9855: 2378209, 9857: 2387413, 9866: 2387615}
[2025-10-11 05:10:10] 2025-10-11 03:04:11,917 | INFO     | --------------------------------------------------
[2025-10-11 05:10:10] 2025-10-11 03:04:11,917 | INFO     | 
[2025-10-11 05:10:10] 2025-10-11 03:04:11,917 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/0
[2025-10-11 05:10:10] 2025-10-11 03:04:11,952 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 05:10:10] 2025-10-11 03:04:11,953 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 05:10:10] 2025-10-11 03:04:11,953 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 05:10:10] 2025-10-11 03:04:11,953 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 05:10:10] 2025-10-11 03:04:11,953 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 05:10:10] 2025-10-11 03:04:11,953 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 05:10:10] 2025-10-11 03:04:11,953 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 05:10:10] 2025-10-11 03:04:11,953 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 05:10:10] 2025-10-11 03:04:11,954 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 05:10:10] 2025-10-11 03:04:11,954 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 05:10:10] 2025-10-11 03:04:11,954 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 05:10:10] 2025-10-11 03:04:11,954 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 05:10:10] 2025-10-11 03:04:11,954 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 05:10:10] 2025-10-11 03:04:11,954 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 05:10:10] 2025-10-11 03:04:11,954 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 05:10:10] 2025-10-11 03:04:11,954 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 05:10:10] 2025-10-11 03:04:11,954 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 05:10:10] 2025-10-11 03:04:11,954 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 05:10:10] 2025-10-11 03:04:11,955 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 05:10:10] 2025-10-11 03:04:11,955 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 05:10:10] 2025-10-11 03:04:11,955 | INFO     | job 6837378863 has completed (purged errors)
[2025-10-11 05:10:10] 2025-10-11 03:04:11,955 | INFO     | overall cleanup function is called
[2025-10-11 05:10:10] 2025-10-11 03:04:12,964 | INFO     | --- collectZombieJob: --- 10, [3439411]
[2025-10-11 05:10:10] 2025-10-11 03:04:12,964 | INFO     | zombie collector waiting for pid 3439411
[2025-10-11 05:10:10] 2025-10-11 03:04:12,964 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 05:10:10] 2025-10-11 03:04:12,965 | INFO     | collected zombie processes
[2025-10-11 05:10:10] 2025-10-11 03:04:12,965 | INFO     | will attempt to kill all subprocesses of pid=3439411
[2025-10-11 05:10:10] 2025-10-11 03:04:13,680 | INFO     | process IDs to be killed: [3439411] (in reverse order)
[2025-10-11 05:10:10] 2025-10-11 03:04:13,951 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 05:10:10] 2025-10-11 03:04:13,951 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 05:10:10] 2025-10-11 03:04:13,982 | INFO     | did not find any defunct processes belonging to 3439411
[2025-10-11 05:10:10] 2025-10-11 03:04:14,011 | INFO     | did not find any defunct processes belonging to 3439411
[2025-10-11 05:10:10] 2025-10-11 03:04:14,011 | INFO     | ready for new job
[2025-10-11 05:10:10] 2025-10-11 03:04:14,011 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 05:10:10] 2025-10-11 03:04:14,014 | INFO     | ***************************************
[2025-10-11 05:10:10] 2025-10-11 03:04:14,014 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 05:10:10] 2025-10-11 03:04:14,014 | INFO     | ***************************************
[2025-10-11 05:10:10] 2025-10-11 03:04:14,014 | INFO     | 
[2025-10-11 05:10:10] 2025-10-11 03:04:14,022 | INFO     | architecture information:
[2025-10-11 05:10:10] 2025-10-11 03:04:14,023 | INFO     | executing command: cat /etc/os-release
[2025-10-11 05:10:10] 2025-10-11 03:04:14,047 | INFO     | cat /etc/os-release:
[2025-10-11 05:10:10] NAME="CentOS Linux"
[2025-10-11 05:10:10] VERSION="7 (Core)"
[2025-10-11 05:10:10] ID="centos"
[2025-10-11 05:10:10] ID_LIKE="rhel fedora"
[2025-10-11 05:10:10] VERSION_ID="7"
[2025-10-11 05:10:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 05:10:10] ANSI_COLOR="0;31"
[2025-10-11 05:10:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 05:10:10] HOME_URL="https://www.centos.org/"
[2025-10-11 05:10:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 05:10:10] 
[2025-10-11 05:10:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 05:10:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 05:10:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 05:10:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 05:10:10] 
[2025-10-11 05:10:10] 2025-10-11 03:04:14,048 | INFO     | ***************************************
[2025-10-11 05:10:10] 2025-10-11 03:04:14,550 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2025-10-11 05:10:10] 2025-10-11 03:04:14,579 | INFO     | sufficient remaining disk space (3333150474240 B)
[2025-10-11 05:10:10] 2025-10-11 03:04:14,580 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 05:10:10] 2025-10-11 03:04:14,580 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 05:10:10] 2025-10-11 03:04:14,580 | INFO     | update_server=False
[2025-10-11 05:10:10] 2025-10-11 03:04:14,581 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 05:10:10] 2025-10-11 03:04:14,677 | INFO     | all data control threads have been joined
[2025-10-11 05:10:10] 2025-10-11 03:04:15,214 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 05:10:10] 2025-10-11 03:04:15,214 | INFO     | aborting loop
[2025-10-11 05:10:10] 2025-10-11 03:04:15,585 | INFO     | [job] retrieve thread has finished
[2025-10-11 05:10:10] 2025-10-11 03:04:15,586 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 05:10:10] 2025-10-11 03:04:15,682 | INFO     | [data] control thread has finished
[2025-10-11 05:10:10] 2025-10-11 03:04:15,791 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 05:10:10] 2025-10-11 03:04:15,886 | INFO     | all payload control threads have been joined
[2025-10-11 05:10:10] 2025-10-11 03:04:15,997 | INFO     | [payload] failed_post thread has finished
[2025-10-11 05:10:10] 2025-10-11 03:04:16,201 | INFO     | all job control threads have been joined
[2025-10-11 05:10:10] 2025-10-11 03:04:16,219 | INFO     | [job] job monitor thread has finished
[2025-10-11 05:10:10] 2025-10-11 03:04:16,536 | INFO     | [payload] validate_post thread has finished
[2025-10-11 05:10:10] 2025-10-11 03:04:16,547 | INFO     | [data] copytool_in thread has finished
[2025-10-11 05:10:10] 2025-10-11 03:04:16,712 | INFO     | [job] validate thread has finished
[2025-10-11 05:10:10] 2025-10-11 03:04:16,892 | INFO     | [payload] control thread has finished
[2025-10-11 05:10:10] 2025-10-11 03:04:16,897 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 05:10:10] 2025-10-11 03:04:16,925 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 05:10:10] 2025-10-11 03:04:16,941 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 05:10:10] 2025-10-11 03:04:17,206 | INFO     | [job] control thread has finished
[2025-10-11 05:10:10] 2025-10-11 03:04:17,590 | INFO     | [data] copytool_out thread has finished
[2025-10-11 05:10:10] 2025-10-11 03:04:17,780 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 05:10:10] 2025-10-11 03:04:17,931 | INFO     | [job] queue monitor thread has finished
[2025-10-11 05:10:10] 2025-10-11 03:04:21,786 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 05:10:10] 2025-10-11 03:04:24,463 [wrapper] supervise_pilot (15 min periods counter: 12)
[2025-10-11 05:10:10] 2025-10-11 03:04:25,052 | INFO     | job.realtimelogging is not enabled
[2025-10-11 05:10:10] 2025-10-11 03:04:26,057 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 05:10:10] 2025-10-11 03:04:42,609 | INFO     | [monitor] cgroup control has ended
[2025-10-11 05:10:10] 2025-10-11 03:04:43,382 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22365119305536)>', '<ExcThread(monitor, started 22364880336640)>']
[2025-10-11 05:10:10] 2025-10-11 03:04:45,367 | INFO     | PID=3382886 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 05:10:10] 2025-10-11 03:04:45,368 | INFO     | .. there are 11 such processes running
[2025-10-11 05:10:10] 2025-10-11 03:04:45,368 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 05:10:10] 2025-10-11 03:04:45,368 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 05:10:10] 2025-10-11 03:04:45,368 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 05:10:10] 2025-10-11 03:04:45,368 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 05:10:10] 2025-10-11 03:04:45,368 | INFO     | [monitor] control thread has ended
[2025-10-11 05:10:10] 2025-10-11 03:04:48,402 | INFO     | all workflow threads have been joined
[2025-10-11 05:10:10] 2025-10-11 03:04:48,402 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 05:10:10] 2025-10-11 03:04:48,403 | INFO     | traces error code: 0
[2025-10-11 05:10:10] 2025-10-11 03:04:48,403 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 05:10:10] 2025-10-11 03:04:48,553 [wrapper] ==== pilot stdout END ====
[2025-10-11 05:10:10] 2025-10-11 03:04:48,555 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 05:10:10] 2025-10-11 03:04:48,559 [wrapper] pilotpid: 3382886
[2025-10-11 05:10:10] 2025-10-11 03:04:48,562 [wrapper] Pilot exit status: 0
[2025-10-11 05:10:10] 2025-10-11 03:04:48,574 [wrapper] pandaids: 6837378863
[2025-10-11 05:10:10] 2025-10-11 03:04:48,698 [wrapper] cleanup supervisor_pilot 3838240 3382888
[2025-10-11 05:10:10] 2025-10-11 03:04:48,702 [wrapper] Test setup, not cleaning
[2025-10-11 05:10:10] 2025-10-11 03:04:48,705 [wrapper] apfmon messages muted
[2025-10-11 05:10:10] 2025-10-11 03:04:48,708 [wrapper] ==== wrapper stdout END ====
[2025-10-11 05:10:10] 2025-10-11 03:04:48,711 [wrapper] ==== wrapper stderr END ====
[2025-10-11 05:10:10]  *** Error codes and diagnostics ***
[2025-10-11 05:10:10]     "exeErrorCode": 0,
[2025-10-11 05:10:10]     "exeErrorDiag": "",
[2025-10-11 05:10:10]     "pilotErrorCode": 0,
[2025-10-11 05:10:10]     "pilotErrorDiag": "",
[2025-10-11 05:10:10]  *** Listing of results directory ***
[2025-10-11 05:10:10] total 412920
[2025-10-11 05:10:10] -rw-r--r-- 1 boinc boinc    557409 Oct 10 03:33 pilot3.tar.gz
[2025-10-11 05:10:10] -rwx------ 1 boinc boinc     36292 Oct 10 03:46 runpilot2-wrapper.sh
[2025-10-11 05:10:10] -rw-r--r-- 1 boinc boinc      5112 Oct 10 03:46 queuedata.json
[2025-10-11 05:10:10] -rw-r--r-- 1 boinc boinc       100 Oct 11 02:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 05:10:10] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 02:19 run_atlas
[2025-10-11 05:10:10] -rw-r--r-- 1 boinc boinc       105 Oct 11 02:19 job.xml
[2025-10-11 05:10:10] -rw-r--r-- 1 boinc boinc      6685 Oct 11 02:19 init_data.xml
[2025-10-11 05:10:10] -rw-r--r-- 2 boinc boinc 220486132 Oct 11 02:19 EVNT.46676267._001224.pool.root.1
[2025-10-11 05:10:10] -rw-r--r-- 2 boinc boinc     15120 Oct 11 02:19 start_atlas.sh
[2025-10-11 05:10:10] drwxrwx--x 2 boinc boinc      4096 Oct 11 02:19 shared
[2025-10-11 05:10:10] -rw-r--r-- 2 boinc boinc    569678 Oct 11 02:19 input.tar.gz
[2025-10-11 05:10:10] -rw-r--r-- 1 boinc boinc         0 Oct 11 02:19 boinc_lockfile
[2025-10-11 05:10:10] -rw-r--r-- 1 boinc boinc      2550 Oct 11 02:19 pandaJob.out
[2025-10-11 05:10:10] -rw------- 1 boinc boinc    975525 Oct 11 02:19 agis_schedconf.cvmfs.json
[2025-10-11 05:10:10] -rw------- 1 boinc boinc   1560580 Oct 11 02:19 agis_ddmendpoints.agis.ALL.json
[2025-10-11 05:10:10] drwx------ 5 boinc boinc      4096 Oct 11 02:19 pilot3
[2025-10-11 05:10:10] -rw------- 1 boinc boinc 194995803 Oct 11 05:03 HITS.46676269._030002.pool.root.1
[2025-10-11 05:10:10] -rw-r--r-- 1 boinc boinc       528 Oct 11 05:03 boinc_task_state.xml
[2025-10-11 05:10:10] -rw------- 1 boinc boinc        95 Oct 11 05:03 pilot_heartbeat.json
[2025-10-11 05:10:10] -rw------- 1 boinc boinc      1027 Oct 11 05:03 memory_monitor_summary.json
[2025-10-11 05:10:10] -rw------- 1 boinc boinc    339072 Oct 11 05:04 log.46676269._030002.job.log.tgz.1
[2025-10-11 05:10:10] -rw------- 1 boinc boinc      7785 Oct 11 05:04 heartbeat.json
[2025-10-11 05:10:10] -rw------- 1 boinc boinc      4907 Oct 11 05:04 pilotlog.txt
[2025-10-11 05:10:10] -rw------- 1 boinc boinc   1378256 Oct 11 05:04 log.46676269._030002.job.log.1
[2025-10-11 05:10:10] -rw------- 1 boinc boinc       357 Oct 11 05:04 output.list
[2025-10-11 05:10:10] -rw-r--r-- 1 boinc boinc       620 Oct 11 05:04 runtime_log
[2025-10-11 05:10:10] -rw------- 1 boinc boinc   1740800 Oct 11 05:04 result.tar.gz
[2025-10-11 05:10:10] -rw-r--r-- 1 boinc boinc      9069 Oct 11 05:04 runtime_log.err
[2025-10-11 05:10:10] -rw------- 1 boinc boinc       664 Oct 11 05:04 lBrNDmiOHR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmxbNDmWdBJim.diag
[2025-10-11 05:10:10] -rw-r--r-- 1 boinc boinc        26 Oct 11 05:10 wrapper_checkpoint.txt
[2025-10-11 05:10:10] -rw-r--r-- 1 boinc boinc      8192 Oct 11 05:10 boinc_mmap_file
[2025-10-11 05:10:10] -rw-r--r-- 1 boinc boinc     20652 Oct 11 05:10 stderr.txt
[2025-10-11 05:10:10] HITS file was successfully produced:
[2025-10-11 05:10:10] -rw------- 1 boinc boinc 194995803 Oct 11 05:03 shared/HITS.pool.root.1
[2025-10-11 05:10:10]  *** Contents of shared directory: ***
[2025-10-11 05:10:10] total 408032
[2025-10-11 05:10:10] -rw-r--r-- 2 boinc boinc 220486132 Oct 11 02:19 ATLAS.root_0
[2025-10-11 05:10:10] -rw-r--r-- 2 boinc boinc     15120 Oct 11 02:19 start_atlas.sh
[2025-10-11 05:10:10] -rw-r--r-- 2 boinc boinc    569678 Oct 11 02:19 input.tar.gz
[2025-10-11 05:10:10] -rw------- 1 boinc boinc 194995803 Oct 11 05:03 HITS.pool.root.1
[2025-10-11 05:10:10] -rw------- 1 boinc boinc   1740800 Oct 11 05:04 result.tar.gz
05:10:11 (3366436): run_atlas exited; CPU time 39187.095545
05:10:11 (3366436): called boinc_finish(0)

</stderr_txt>
]]>

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