Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
05:27:16 (864633): wrapper (7.7.26015): starting
05:27:16 (864633): wrapper: running run_atlas (--nthreads 4)
[2025-10-10 05:27:16] Arguments: --nthreads 4
[2025-10-10 05:27:16] Threads: 4
[2025-10-10 05:27:16] Checking for CVMFS
[2025-10-10 05:27:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 05:27:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 05:27:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 05:27:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 05:27:17] 2.11.5.0 2691367 1334 100012 151541 2 187 2588778 4096001 6394 130560 0 6570087 99.998 45303 2200 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-10 05:27:17] CVMFS is ok
[2025-10-10 05:27:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 05:27:17] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-10 05:27:17] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-10 05:27:17] Further information can be found at the LHC@home message board.
[2025-10-10 05:27:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 05:27:17] Checking for apptainer binary...
[2025-10-10 05:27:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 05:27:17] Running /usr/bin/apptainer --version
[2025-10-10 05:27:17] apptainer version 1.4.3
[2025-10-10 05:27:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 05:27:17] x32-linux3
[2025-10-10 05:27:17] apptainer works
[2025-10-10 05:27:17] Set ATHENA_PROC_NUMBER=4
[2025-10-10 05:27:17] Set ATHENA_CORE_NUMBER=4
[2025-10-10 05:27:17] Starting ATLAS job with PandaID=6837376196
[2025-10-10 05:27:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 07:29:44]  *** The last 200 lines of the pilot log: ***
[2025-10-10 07:29:44] 2025-10-10 11:28:43,220 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 07:29:44] 2025-10-10 11:28:43,224 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3737.9260000000004
[2025-10-10 07:29:44] 2025-10-10 11:28:43,253 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6837376196/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 07:29:44] 2025-10-10 11:28:43,253 | INFO     | extracted standard info from prmon json
[2025-10-10 07:29:44] 2025-10-10 11:28:43,253 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 07:29:44] 2025-10-10 11:28:43,253 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 07:29:44] 2025-10-10 11:28:43,254 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 07:29:44] 2025-10-10 11:28:43,254 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 07:29:44] 2025-10-10 11:28:43,255 | INFO     | fitting pss+swap vs Time
[2025-10-10 07:29:44] 2025-10-10 11:28:43,255 | INFO     | sum of square deviations: 522502820.0
[2025-10-10 07:29:44] 2025-10-10 11:28:43,256 | INFO     | sum of deviations: 6414810080.999999
[2025-10-10 07:29:44] 2025-10-10 11:28:43,256 | INFO     | mean x: 1760092066.0
[2025-10-10 07:29:44] 2025-10-10 11:28:43,256 | INFO     | mean y: 2312358.8571428573
[2025-10-10 07:29:44] 2025-10-10 11:28:43,256 | INFO     | -- intersect: -21606482649.11031
[2025-10-10 07:29:44] 2025-10-10 11:28:43,256 | INFO     | intersect: -21606482649.11031
[2025-10-10 07:29:44] 2025-10-10 11:28:43,256 | INFO     | chi2: 1.1232182012868255
[2025-10-10 07:29:44] 2025-10-10 11:28:43,256 | INFO     | sum of square deviations: 459366752.5
[2025-10-10 07:29:44] 2025-10-10 11:28:43,257 | INFO     | sum of deviations: 6269148272.500003
[2025-10-10 07:29:44] 2025-10-10 11:28:43,257 | INFO     | mean x: 1760091913.5
[2025-10-10 07:29:44] 2025-10-10 11:28:43,257 | INFO     | mean y: 2312006.8157894737
[2025-10-10 07:29:44] 2025-10-10 11:28:43,257 | INFO     | -- intersect: -24018314472.806828
[2025-10-10 07:29:44] 2025-10-10 11:28:43,257 | INFO     | intersect: -24018314472.806828
[2025-10-10 07:29:44] 2025-10-10 11:28:43,257 | INFO     | chi2: 1.1248509027216487
[2025-10-10 07:29:44] 2025-10-10 11:28:43,257 | INFO     | current chi2=1.1248509027216487 (change=-0.14535923945611565 %)
[2025-10-10 07:29:44] 2025-10-10 11:28:43,257 | INFO     | right removable region: 113
[2025-10-10 07:29:44] 2025-10-10 11:28:43,257 | INFO     | sum of square deviations: 459366752.5
[2025-10-10 07:29:44] 2025-10-10 11:28:43,258 | INFO     | sum of deviations: -4364063830.0
[2025-10-10 07:29:44] 2025-10-10 11:28:43,258 | INFO     | mean x: 1760092218.5
[2025-10-10 07:29:44] 2025-10-10 11:28:43,258 | INFO     | mean y: 2337596.0877192984
[2025-10-10 07:29:44] 2025-10-10 11:28:43,258 | INFO     | -- intersect: 16723518975.491766
[2025-10-10 07:29:44] 2025-10-10 11:28:43,258 | INFO     | intersect: 16723518975.491766
[2025-10-10 07:29:44] 2025-10-10 11:28:43,258 | INFO     | chi2: 0.005408594154941351
[2025-10-10 07:29:44] 2025-10-10 11:28:43,258 | INFO     | current chi2=0.005408594154941351 (change=99.51847342317414 %)
[2025-10-10 07:29:44] 2025-10-10 11:28:43,258 | INFO     | sum of square deviations: 401533110.0
[2025-10-10 07:29:44] 2025-10-10 11:28:43,259 | INFO     | sum of deviations: -3508231451.0
[2025-10-10 07:29:44] 2025-10-10 11:28:43,259 | INFO     | mean x: 1760092371.0
[2025-10-10 07:29:44] 2025-10-10 11:28:43,259 | INFO     | mean y: 2335360.862385321
[2025-10-10 07:29:44] 2025-10-10 11:28:43,259 | INFO     | -- intersect: 15380423141.98549
[2025-10-10 07:29:44] 2025-10-10 11:28:43,259 | INFO     | intersect: 15380423141.98549
[2025-10-10 07:29:44] 2025-10-10 11:28:43,259 | INFO     | chi2: 0.004618870946004977
[2025-10-10 07:29:44] 2025-10-10 11:28:43,259 | INFO     | current chi2=0.004618870946004977 (change=14.601265806103674 %)
[2025-10-10 07:29:44] 2025-10-10 11:28:43,259 | INFO     | left removable region: 20
[2025-10-10 07:29:44] 2025-10-10 11:28:43,259 | INFO     | sum of square deviations: 249388862.0
[2025-10-10 07:29:44] 2025-10-10 11:28:43,260 | INFO     | sum of deviations: -2364919370.0000005
[2025-10-10 07:29:44] 2025-10-10 11:28:43,260 | INFO     | mean x: 1760092493.0
[2025-10-10 07:29:44] 2025-10-10 11:28:43,260 | INFO     | mean y: 2333315.376344086
[2025-10-10 07:29:44] 2025-10-10 11:28:43,260 | INFO     | -- intersect: 16693041939.273472
[2025-10-10 07:29:44] 2025-10-10 11:28:43,260 | INFO     | intersect: 16693041939.273472
[2025-10-10 07:29:44] 2025-10-10 11:28:43,260 | INFO     | chi2: 0.004333336013890839
[2025-10-10 07:29:44] 2025-10-10 11:28:43,260 | INFO     | -- intersect: 16693041939.273472
[2025-10-10 07:29:44] 2025-10-10 11:28:43,260 | INFO     | current memory leak: -9.48 B/s (using 93 data points, chi2=0.00)
[2025-10-10 07:29:44] 2025-10-10 11:28:43,261 | INFO     | could have reported an average CPU frequency of 3822 MHz (7 samples)
[2025-10-10 07:29:44] 2025-10-10 11:28:43,261 | INFO     | ..............................
[2025-10-10 07:29:44] 2025-10-10 11:28:43,261 | INFO     | . Timing measurements:
[2025-10-10 07:29:44] 2025-10-10 11:28:43,261 | INFO     | . get job = 0 s
[2025-10-10 07:29:44] 2025-10-10 11:28:43,261 | INFO     | . initial setup = 2 s
[2025-10-10 07:29:44] 2025-10-10 11:28:43,261 | INFO     | . payload setup = 3 s
[2025-10-10 07:29:44] 2025-10-10 11:28:43,261 | INFO     | . stage-in = 0 s
[2025-10-10 07:29:44] 2025-10-10 11:28:43,261 | INFO     | . payload execution = 7249 s
[2025-10-10 07:29:44] 2025-10-10 11:28:43,261 | INFO     | . stage-out = 0 s
[2025-10-10 07:29:44] 2025-10-10 11:28:43,261 | INFO     | . log creation = 0 s
[2025-10-10 07:29:44] 2025-10-10 11:28:43,261 | INFO     | ..............................
[2025-10-10 07:29:44] 2025-10-10 11:28:43,326 | INFO     | 
[2025-10-10 07:29:44] 2025-10-10 11:28:43,327 | INFO     | job summary report
[2025-10-10 07:29:44] 2025-10-10 11:28:43,327 | INFO     | --------------------------------------------------
[2025-10-10 07:29:44] 2025-10-10 11:28:43,327 | INFO     | PanDA job id: 6837376196
[2025-10-10 07:29:44] 2025-10-10 11:28:43,327 | INFO     | task id: 46676269
[2025-10-10 07:29:44] 2025-10-10 11:28:43,327 | INFO     | errors: (none)
[2025-10-10 07:29:44] 2025-10-10 11:28:43,327 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 07:29:44] 2025-10-10 11:28:43,327 | INFO     | pilot state: finished 
[2025-10-10 07:29:44] 2025-10-10 11:28:43,327 | INFO     | transexitcode: 0
[2025-10-10 07:29:44] 2025-10-10 11:28:43,327 | INFO     | exeerrorcode: 0
[2025-10-10 07:29:44] 2025-10-10 11:28:43,327 | INFO     | exeerrordiag: 
[2025-10-10 07:29:44] 2025-10-10 11:28:43,327 | INFO     | exitcode: 0
[2025-10-10 07:29:44] 2025-10-10 11:28:43,327 | INFO     | exitmsg: OK
[2025-10-10 07:29:44] 2025-10-10 11:28:43,327 | INFO     | cpuconsumptiontime: 27982 s
[2025-10-10 07:29:44] 2025-10-10 11:28:43,327 | INFO     | nevents: 400
[2025-10-10 07:29:44] 2025-10-10 11:28:43,327 | INFO     | neventsw: 0
[2025-10-10 07:29:44] 2025-10-10 11:28:43,327 | INFO     | pid: 875131
[2025-10-10 07:29:44] 2025-10-10 11:28:43,327 | INFO     | pgrp: 875131
[2025-10-10 07:29:44] 2025-10-10 11:28:43,328 | INFO     | corecount: 4
[2025-10-10 07:29:44] 2025-10-10 11:28:43,328 | INFO     | event service: False
[2025-10-10 07:29:44] 2025-10-10 11:28:43,328 | INFO     | sizes: {0: 2348864, 3: 2349126, 11: 2349154, 7256: 2376546, 7257: 2385614, 7264: 2385752}
[2025-10-10 07:29:44] 2025-10-10 11:28:43,328 | INFO     | --------------------------------------------------
[2025-10-10 07:29:44] 2025-10-10 11:28:43,328 | INFO     | 
[2025-10-10 07:29:44] 2025-10-10 11:28:43,328 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-10-10 07:29:44] 2025-10-10 11:28:43,342 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 07:29:44] 2025-10-10 11:28:43,342 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 07:29:44] 2025-10-10 11:28:43,342 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 07:29:44] 2025-10-10 11:28:43,343 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 07:29:44] 2025-10-10 11:28:43,343 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 07:29:44] 2025-10-10 11:28:43,343 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 07:29:44] 2025-10-10 11:28:43,343 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 07:29:44] 2025-10-10 11:28:43,343 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 07:29:44] 2025-10-10 11:28:43,343 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 07:29:44] 2025-10-10 11:28:43,343 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 07:29:44] 2025-10-10 11:28:43,343 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 07:29:44] 2025-10-10 11:28:43,343 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 07:29:44] 2025-10-10 11:28:43,343 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 07:29:44] 2025-10-10 11:28:43,343 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 07:29:44] 2025-10-10 11:28:43,344 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 07:29:44] 2025-10-10 11:28:43,344 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 07:29:44] 2025-10-10 11:28:43,344 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 07:29:44] 2025-10-10 11:28:43,344 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 07:29:44] 2025-10-10 11:28:43,344 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 07:29:44] 2025-10-10 11:28:43,344 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 07:29:44] 2025-10-10 11:28:43,344 | INFO     | job 6837376196 has completed (purged errors)
[2025-10-10 07:29:44] 2025-10-10 11:28:43,344 | INFO     | overall cleanup function is called
[2025-10-10 07:29:44] 2025-10-10 11:28:44,352 | INFO     | --- collectZombieJob: --- 10, [875131]
[2025-10-10 07:29:44] 2025-10-10 11:28:44,353 | INFO     | zombie collector waiting for pid 875131
[2025-10-10 07:29:44] 2025-10-10 11:28:44,353 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 07:29:44] 2025-10-10 11:28:44,353 | INFO     | collected zombie processes
[2025-10-10 07:29:44] 2025-10-10 11:28:44,353 | INFO     | will attempt to kill all subprocesses of pid=875131
[2025-10-10 07:29:44] 2025-10-10 11:28:44,482 | INFO     | process IDs to be killed: [875131] (in reverse order)
[2025-10-10 07:29:44] 2025-10-10 11:28:44,534 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 07:29:44] 2025-10-10 11:28:44,534 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 07:29:44] 2025-10-10 11:28:44,538 | INFO     | did not find any defunct processes belonging to 875131
[2025-10-10 07:29:44] 2025-10-10 11:28:44,541 | INFO     | did not find any defunct processes belonging to 875131
[2025-10-10 07:29:44] 2025-10-10 11:28:44,542 | INFO     | ready for new job
[2025-10-10 07:29:44] 2025-10-10 11:28:44,542 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 07:29:44] 2025-10-10 11:28:44,543 | INFO     | ***************************************
[2025-10-10 07:29:44] 2025-10-10 11:28:44,543 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 07:29:44] 2025-10-10 11:28:44,543 | INFO     | ***************************************
[2025-10-10 07:29:44] 2025-10-10 11:28:44,543 | INFO     | 
[2025-10-10 07:29:44] 2025-10-10 11:28:44,562 | INFO     | architecture information:
[2025-10-10 07:29:44] 2025-10-10 11:28:44,562 | INFO     | executing command: cat /etc/os-release
[2025-10-10 07:29:44] 2025-10-10 11:28:44,574 | INFO     | cat /etc/os-release:
[2025-10-10 07:29:44] NAME="CentOS Linux"
[2025-10-10 07:29:44] VERSION="7 (Core)"
[2025-10-10 07:29:44] ID="centos"
[2025-10-10 07:29:44] ID_LIKE="rhel fedora"
[2025-10-10 07:29:44] VERSION_ID="7"
[2025-10-10 07:29:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 07:29:44] ANSI_COLOR="0;31"
[2025-10-10 07:29:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 07:29:44] HOME_URL="https://www.centos.org/"
[2025-10-10 07:29:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 07:29:44] 
[2025-10-10 07:29:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 07:29:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 07:29:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 07:29:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 07:29:44] 
[2025-10-10 07:29:44] 2025-10-10 11:28:44,574 | INFO     | ***************************************
[2025-10-10 07:29:44] 2025-10-10 11:28:45,076 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-10-10 07:29:44] 2025-10-10 11:28:45,088 | INFO     | sufficient remaining disk space (396466585600 B)
[2025-10-10 07:29:44] 2025-10-10 11:28:45,088 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 07:29:44] 2025-10-10 11:28:45,088 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 07:29:44] 2025-10-10 11:28:45,088 | INFO     | update_server=False
[2025-10-10 07:29:44] 2025-10-10 11:28:45,088 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 07:29:44] 2025-10-10 11:28:45,088 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 07:29:44] 2025-10-10 11:28:45,089 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 07:29:44] 2025-10-10 11:28:45,090 | INFO     | all job control threads have been joined
[2025-10-10 07:29:44] 2025-10-10 11:28:45,220 | INFO     | all data control threads have been joined
[2025-10-10 07:29:44] 2025-10-10 11:28:45,463 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 07:29:44] 2025-10-10 11:28:45,463 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 07:29:44] 2025-10-10 11:28:45,463 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 07:29:44] 2025-10-10 11:28:45,463 | INFO     | will abort loop
[2025-10-10 07:29:44] 2025-10-10 11:28:45,908 | INFO     | all payload control threads have been joined
[2025-10-10 07:29:44] 2025-10-10 11:28:46,092 | INFO     | [job] retrieve thread has finished
[2025-10-10 07:29:44] 2025-10-10 11:28:46,092 | INFO     | [job] queue monitor thread has finished
[2025-10-10 07:29:44] 2025-10-10 11:28:46,095 | INFO     | [job] control thread has finished
[2025-10-10 07:29:44] 2025-10-10 11:28:46,176 | INFO     | [data] copytool_in thread has finished
[2025-10-10 07:29:44] 2025-10-10 11:28:46,224 | INFO     | [data] control thread has finished
[2025-10-10 07:29:44] 2025-10-10 11:28:46,404 | INFO     | [payload] validate_post thread has finished
[2025-10-10 07:29:44] 2025-10-10 11:28:46,468 | INFO     | [job] job monitor thread has finished
[2025-10-10 07:29:44] 2025-10-10 11:28:46,472 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 07:29:44] 2025-10-10 11:28:46,476 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 07:29:44] 2025-10-10 11:28:46,588 | INFO     | [job] validate thread has finished
[2025-10-10 07:29:44] 2025-10-10 11:28:46,831 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 07:29:44] 2025-10-10 11:28:46,912 | INFO     | [payload] control thread has finished
[2025-10-10 07:29:44] 2025-10-10 11:28:47,094 | INFO     | [data] copytool_out thread has finished
[2025-10-10 07:29:44] 2025-10-10 11:28:47,240 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 07:29:44] 2025-10-10 11:28:47,694 | INFO     | [payload] failed_post thread has finished
[2025-10-10 07:29:44] 2025-10-10 11:28:50,836 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 07:29:44] 2025-10-10 11:28:55,236 | INFO     | job.realtimelogging is not enabled
[2025-10-10 07:29:44] 2025-10-10 11:28:56,241 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 07:29:44] 2025-10-10 11:29:15,322 | INFO     | PID=868468 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 07:29:44] 2025-10-10 11:29:15,322 | INFO     | .. there are 8 such processes running
[2025-10-10 07:29:44] 2025-10-10 11:29:15,322 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 07:29:44] 2025-10-10 11:29:15,322 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 07:29:44] 2025-10-10 11:29:15,322 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 07:29:44] 2025-10-10 11:29:37,202 | INFO     | [monitor] cgroup control has ended
[2025-10-10 07:29:44] 2025-10-10 11:29:39,144 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139943858435904)>', '<ExcThread(monitor, started 139942969726720)>']
[2025-10-10 07:29:44] 2025-10-10 11:29:39,408 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 07:29:44] 2025-10-10 11:29:39,408 | INFO     | [monitor] control thread has ended
[2025-10-10 07:29:44] 2025-10-10 11:29:44,168 | INFO     | all workflow threads have been joined
[2025-10-10 07:29:44] 2025-10-10 11:29:44,168 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 07:29:44] 2025-10-10 11:29:44,168 | INFO     | traces error code: 0
[2025-10-10 07:29:44] 2025-10-10 11:29:44,168 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 07:29:44] 2025-10-10 11:29:44,249 [wrapper] ==== pilot stdout END ====
[2025-10-10 07:29:44] 2025-10-10 11:29:44,251 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 07:29:44] 2025-10-10 11:29:44,253 [wrapper] pilotpid: 868468
[2025-10-10 07:29:44] 2025-10-10 11:29:44,255 [wrapper] Pilot exit status: 0
[2025-10-10 07:29:44] 2025-10-10 11:29:44,261 [wrapper] pandaids: 6837376196
[2025-10-10 07:29:44] 2025-10-10 11:29:44,292 [wrapper] cleanup supervisor_pilot 1056747 868469
[2025-10-10 07:29:44] 2025-10-10 11:29:44,294 [wrapper] Test setup, not cleaning
[2025-10-10 07:29:44] 2025-10-10 11:29:44,296 [wrapper] apfmon messages muted
[2025-10-10 07:29:44] 2025-10-10 11:29:44,298 [wrapper] ==== wrapper stdout END ====
[2025-10-10 07:29:44] 2025-10-10 11:29:44,300 [wrapper] ==== wrapper stderr END ====
[2025-10-10 07:29:44]  *** Error codes and diagnostics ***
[2025-10-10 07:29:44]     "exeErrorCode": 0,
[2025-10-10 07:29:44]     "exeErrorDiag": "",
[2025-10-10 07:29:44]     "pilotErrorCode": 0,
[2025-10-10 07:29:44]     "pilotErrorDiag": "",
[2025-10-10 07:29:44]  *** Listing of results directory ***
[2025-10-10 07:29:44] total 413176
[2025-10-10 07:29:44] -rw-r--r-- 1 boinc boinc    557409 Oct  9 19:37 pilot3.tar.gz
[2025-10-10 07:29:44] -rw-r--r-- 1 boinc boinc      5112 Oct  9 19:45 queuedata.json
[2025-10-10 07:29:44] -rwx------ 1 boinc boinc     36292 Oct  9 19:46 runpilot2-wrapper.sh
[2025-10-10 07:29:44] -rw-r--r-- 1 boinc boinc       100 Oct 10 05:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 07:29:44] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 05:27 run_atlas
[2025-10-10 07:29:44] -rw-r--r-- 1 boinc boinc       105 Oct 10 05:27 job.xml
[2025-10-10 07:29:44] -rw-r--r-- 2 boinc boinc     15120 Oct 10 05:27 start_atlas.sh
[2025-10-10 07:29:44] drwxrwx--x 2 boinc boinc      4096 Oct 10 05:27 shared
[2025-10-10 07:29:44] -rw-r--r-- 2 boinc boinc    569681 Oct 10 05:27 input.tar.gz
[2025-10-10 07:29:44] -rw-r--r-- 1 boinc boinc      9157 Oct 10 05:27 init_data.xml
[2025-10-10 07:29:44] -rw-r--r-- 2 boinc boinc 221010989 Oct 10 05:27 EVNT.46676267._001190.pool.root.1
[2025-10-10 07:29:44] -rw-r--r-- 1 boinc boinc         0 Oct 10 05:27 boinc_setup_complete
[2025-10-10 07:29:44] -rw-r--r-- 1 boinc boinc         0 Oct 10 05:27 boinc_lockfile
[2025-10-10 07:29:44] -rw-r--r-- 1 boinc boinc      2550 Oct 10 05:27 pandaJob.out
[2025-10-10 07:29:44] -rw------- 1 boinc boinc    975511 Oct 10 05:27 agis_schedconf.cvmfs.json
[2025-10-10 07:29:44] -rw------- 1 boinc boinc   1560580 Oct 10 05:27 agis_ddmendpoints.agis.ALL.json
[2025-10-10 07:29:44] drwx------ 5 boinc boinc      4096 Oct 10 05:27 pilot3
[2025-10-10 07:29:44] -rw-r--r-- 1 boinc boinc       529 Oct 10 07:28 boinc_task_state.xml
[2025-10-10 07:29:44] -rw------- 1 boinc boinc 195472231 Oct 10 07:28 HITS.46676269._028378.pool.root.1
[2025-10-10 07:29:44] -rw------- 1 boinc boinc        95 Oct 10 07:28 pilot_heartbeat.json
[2025-10-10 07:29:44] -rw------- 1 boinc boinc      1025 Oct 10 07:28 memory_monitor_summary.json
[2025-10-10 07:29:44] -rw------- 1 boinc boinc    301029 Oct 10 07:28 log.46676269._028378.job.log.tgz.1
[2025-10-10 07:29:44] -rw------- 1 boinc boinc      7745 Oct 10 07:28 heartbeat.json
[2025-10-10 07:29:44] -rw-r--r-- 1 boinc boinc      8192 Oct 10 07:29 boinc_mmap_file
[2025-10-10 07:29:44] -rw-r--r-- 1 boinc boinc        27 Oct 10 07:29 wrapper_checkpoint.txt
[2025-10-10 07:29:44] -rw------- 1 boinc boinc      5088 Oct 10 07:29 pilotlog.txt
[2025-10-10 07:29:44] -rw------- 1 boinc boinc   1047171 Oct 10 07:29 log.46676269._028378.job.log.1
[2025-10-10 07:29:44] -rw------- 1 boinc boinc       357 Oct 10 07:29 output.list
[2025-10-10 07:29:44] -rw-r--r-- 1 boinc boinc       620 Oct 10 07:29 runtime_log
[2025-10-10 07:29:44] -rw------- 1 boinc boinc   1372160 Oct 10 07:29 result.tar.gz
[2025-10-10 07:29:44] -rw------- 1 boinc boinc       644 Oct 10 07:29 z4RMDmvVFR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgfbNDmlQu2un.diag
[2025-10-10 07:29:44] -rw-r--r-- 1 boinc boinc      8764 Oct 10 07:29 runtime_log.err
[2025-10-10 07:29:44] -rw-r--r-- 1 boinc boinc     21124 Oct 10 07:29 stderr.txt
[2025-10-10 07:29:44] HITS file was successfully produced:
[2025-10-10 07:29:44] -rw------- 1 boinc boinc 195472231 Oct 10 07:28 shared/HITS.pool.root.1
[2025-10-10 07:29:44]  *** Contents of shared directory: ***
[2025-10-10 07:29:44] total 408648
[2025-10-10 07:29:44] -rw-r--r-- 2 boinc boinc     15120 Oct 10 05:27 start_atlas.sh
[2025-10-10 07:29:44] -rw-r--r-- 2 boinc boinc    569681 Oct 10 05:27 input.tar.gz
[2025-10-10 07:29:44] -rw-r--r-- 2 boinc boinc 221010989 Oct 10 05:27 ATLAS.root_0
[2025-10-10 07:29:44] -rw------- 1 boinc boinc 195472231 Oct 10 07:28 HITS.pool.root.1
[2025-10-10 07:29:44] -rw------- 1 boinc boinc   1372160 Oct 10 07:29 result.tar.gz
07:29:45 (864633): run_atlas exited; CPU time 28071.181438
07:29:45 (864633): called boinc_finish(0)

</stderr_txt>
]]>

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