Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:58:14 (1958197): wrapper (7.7.26015): starting
16:58:14 (1958197): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 16:58:14] Arguments: --nthreads 12
[2025-10-10 16:58:14] Threads: 12
[2025-10-10 16:58:14] Checking for CVMFS
[2025-10-10 16:58:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 16:58:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 16:58:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 17:51:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 17:51:01] 2.13.2.0 8216 22165 254132 151550 2 271 33890874 46080000 54154 130560 0 151189526 99.883 46499675 22615 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-10 17:51:01] CVMFS is ok
[2025-10-10 17:51:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 17:51:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 17:51:01] Further information can be found at the LHC@home message board.
[2025-10-10 17:51:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 17:51:01] Checking for apptainer binary...
[2025-10-10 17:51:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 17:51:01] Running /usr/bin/apptainer --version
[2025-10-10 17:51:01] apptainer version 1.4.2-1.el9
[2025-10-10 17:51:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 17:51:03] mff2103.farm.particle.cz
[2025-10-10 17:51:03] apptainer works
[2025-10-10 17:51:03] Set ATHENA_PROC_NUMBER=12
[2025-10-10 17:51:03] Set ATHENA_CORE_NUMBER=12
[2025-10-10 17:51:03] Starting ATLAS job with PandaID=6837364691
[2025-10-10 17:51:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 19:48:39]  *** The last 200 lines of the pilot log: ***
[2025-10-10 19:48:39] 2025-10-10 17:47:00,567 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 19:48:39] 2025-10-10 17:47:00,569 | INFO     | fitting pss+swap vs Time
[2025-10-10 19:48:39] 2025-10-10 17:47:00,569 | INFO     | sum of square deviations: 401544829.4128451
[2025-10-10 19:48:39] 2025-10-10 17:47:00,578 | INFO     | sum of deviations: 35818033641.6147
[2025-10-10 19:48:39] 2025-10-10 17:47:00,578 | INFO     | mean x: 1760115065.0733945
[2025-10-10 19:48:39] 2025-10-10 17:47:00,578 | INFO     | mean y: 2498310.7981651374
[2025-10-10 19:48:39] 2025-10-10 17:47:00,579 | INFO     | -- intersect: -157000794960.58316
[2025-10-10 19:48:39] 2025-10-10 17:47:00,579 | INFO     | intersect: -157000794960.58316
[2025-10-10 19:48:39] 2025-10-10 17:47:00,579 | INFO     | chi2: 6.593691256038497
[2025-10-10 19:48:39] 2025-10-10 17:47:00,579 | INFO     | sum of square deviations: 348783489.38461506
[2025-10-10 19:48:39] 2025-10-10 17:47:00,580 | INFO     | sum of deviations: 48941266253.807686
[2025-10-10 19:48:39] 2025-10-10 17:47:00,580 | INFO     | mean x: 1760114912.5769231
[2025-10-10 19:48:39] 2025-10-10 17:47:00,580 | INFO     | mean y: 2535014.8365384615
[2025-10-10 19:48:39] 2025-10-10 17:47:00,580 | INFO     | -- intersect: -246976623103.3183
[2025-10-10 19:48:39] 2025-10-10 17:47:00,580 | INFO     | intersect: -246976623103.3183
[2025-10-10 19:48:39] 2025-10-10 17:47:00,580 | INFO     | chi2: 5.077879823950357
[2025-10-10 19:48:39] 2025-10-10 17:47:00,580 | INFO     | current chi2=5.077879823950357 (change=22.988814204789477 %)
[2025-10-10 19:48:39] 2025-10-10 17:47:00,580 | INFO     | right removable region: 103
[2025-10-10 19:48:39] 2025-10-10 17:47:00,581 | INFO     | sum of square deviations: 348778609.38461506
[2025-10-10 19:48:39] 2025-10-10 17:47:00,581 | INFO     | sum of deviations: 102201847.42308235
[2025-10-10 19:48:39] 2025-10-10 17:47:00,594 | INFO     | mean x: 1760115217.5769231
[2025-10-10 19:48:39] 2025-10-10 17:47:00,595 | INFO     | mean y: 2601269.2596153845
[2025-10-10 19:48:39] 2025-10-10 17:47:00,595 | INFO     | -- intersect: -513161515.70943636
[2025-10-10 19:48:39] 2025-10-10 17:47:00,595 | INFO     | intersect: -513161515.70943636
[2025-10-10 19:48:39] 2025-10-10 17:47:00,595 | INFO     | chi2: 2.4188106000469913
[2025-10-10 19:48:39] 2025-10-10 17:47:00,595 | INFO     | current chi2=2.4188106000469913 (change=63.31628967565251 %)
[2025-10-10 19:48:39] 2025-10-10 17:47:00,596 | INFO     | sum of square deviations: 300849689.3535353
[2025-10-10 19:48:39] 2025-10-10 17:47:00,596 | INFO     | sum of deviations: -12930577344.030304
[2025-10-10 19:48:39] 2025-10-10 17:47:00,596 | INFO     | mean x: 1760115370.0808082
[2025-10-10 19:48:39] 2025-10-10 17:47:00,596 | INFO     | mean y: 2642088.878787879
[2025-10-10 19:48:39] 2025-10-10 17:47:00,596 | INFO     | -- intersect: 75652738242.04926
[2025-10-10 19:48:39] 2025-10-10 17:47:00,596 | INFO     | intersect: 75652738242.04926
[2025-10-10 19:48:39] 2025-10-10 17:47:00,597 | INFO     | chi2: 1.7253687286546313
[2025-10-10 19:48:39] 2025-10-10 17:47:00,597 | INFO     | current chi2=1.7253687286546313 (change=28.668713101343617 %)
[2025-10-10 19:48:39] 2025-10-10 17:47:00,597 | INFO     | sum of square deviations: 257525506.8191491
[2025-10-10 19:48:39] 2025-10-10 17:47:00,597 | INFO     | sum of deviations: -12906518372.0
[2025-10-10 19:48:39] 2025-10-10 17:47:00,598 | INFO     | mean x: 1760115522.5851064
[2025-10-10 19:48:39] 2025-10-10 17:47:00,598 | INFO     | mean y: 2641903.0
[2025-10-10 19:48:39] 2025-10-10 17:47:00,598 | INFO     | -- intersect: 88215120774.23027
[2025-10-10 19:48:39] 2025-10-10 17:47:00,598 | INFO     | intersect: 88215120774.23027
[2025-10-10 19:48:39] 2025-10-10 17:47:00,598 | INFO     | chi2: 1.7058732412812179
[2025-10-10 19:48:39] 2025-10-10 17:47:00,598 | INFO     | current chi2=1.7058732412812179 (change=1.1299316516890388 %)
[2025-10-10 19:48:39] 2025-10-10 17:47:00,598 | INFO     | left removable region: 30
[2025-10-10 19:48:39] 2025-10-10 17:47:00,598 | INFO     | sum of square deviations: 120605059.1232876
[2025-10-10 19:48:39] 2025-10-10 17:47:00,603 | INFO     | sum of deviations: 589082671.260274
[2025-10-10 19:48:39] 2025-10-10 17:47:00,603 | INFO     | mean x: 1760115797.109589
[2025-10-10 19:48:39] 2025-10-10 17:47:00,603 | INFO     | mean y: 2692263.342465753
[2025-10-10 19:48:39] 2025-10-10 17:47:00,603 | INFO     | -- intersect: -8594407419.091314
[2025-10-10 19:48:39] 2025-10-10 17:47:00,603 | INFO     | intersect: -8594407419.091314
[2025-10-10 19:48:39] 2025-10-10 17:47:00,603 | INFO     | chi2: 0.00010110873234982328
[2025-10-10 19:48:39] 2025-10-10 17:47:00,603 | INFO     | -- intersect: -8594407419.091314
[2025-10-10 19:48:39] 2025-10-10 17:47:00,603 | INFO     | current memory leak: 4.88 B/s (using 73 data points, chi2=0.00)
[2025-10-10 19:48:39] 2025-10-10 17:47:00,604 | INFO     | could have reported an average CPU frequency of 2824 MHz (7 samples)
[2025-10-10 19:48:39] 2025-10-10 17:47:00,604 | INFO     | ..............................
[2025-10-10 19:48:39] 2025-10-10 17:47:00,604 | INFO     | . Timing measurements:
[2025-10-10 19:48:39] 2025-10-10 17:47:00,604 | INFO     | . get job = 0 s
[2025-10-10 19:48:39] 2025-10-10 17:47:00,604 | INFO     | . initial setup = 6 s
[2025-10-10 19:48:39] 2025-10-10 17:47:00,604 | INFO     | . payload setup = 70 s
[2025-10-10 19:48:39] 2025-10-10 17:47:00,605 | INFO     | . stage-in = 0 s
[2025-10-10 19:48:39] 2025-10-10 17:47:00,605 | INFO     | . payload execution = 6633 s
[2025-10-10 19:48:39] 2025-10-10 17:47:00,605 | INFO     | . stage-out = 2 s
[2025-10-10 19:48:39] 2025-10-10 17:47:00,605 | INFO     | . log creation = 0 s
[2025-10-10 19:48:39] 2025-10-10 17:47:00,605 | INFO     | ..............................
[2025-10-10 19:48:39] 2025-10-10 17:47:00,875 | INFO     | 
[2025-10-10 19:48:39] 2025-10-10 17:47:00,875 | INFO     | job summary report
[2025-10-10 19:48:39] 2025-10-10 17:47:00,875 | INFO     | --------------------------------------------------
[2025-10-10 19:48:39] 2025-10-10 17:47:00,875 | INFO     | PanDA job id: 6837364691
[2025-10-10 19:48:39] 2025-10-10 17:47:00,875 | INFO     | task id: 46676269
[2025-10-10 19:48:39] 2025-10-10 17:47:00,875 | INFO     | errors: (none)
[2025-10-10 19:48:39] 2025-10-10 17:47:00,875 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 19:48:39] 2025-10-10 17:47:00,875 | INFO     | pilot state: finished 
[2025-10-10 19:48:39] 2025-10-10 17:47:00,875 | INFO     | transexitcode: 0
[2025-10-10 19:48:39] 2025-10-10 17:47:00,875 | INFO     | exeerrorcode: 0
[2025-10-10 19:48:39] 2025-10-10 17:47:00,876 | INFO     | exeerrordiag: 
[2025-10-10 19:48:39] 2025-10-10 17:47:00,876 | INFO     | exitcode: 0
[2025-10-10 19:48:39] 2025-10-10 17:47:00,876 | INFO     | exitmsg: OK
[2025-10-10 19:48:39] 2025-10-10 17:47:00,876 | INFO     | cpuconsumptiontime: 38603 s
[2025-10-10 19:48:39] 2025-10-10 17:47:00,876 | INFO     | nevents: 400
[2025-10-10 19:48:39] 2025-10-10 17:47:00,876 | INFO     | neventsw: 0
[2025-10-10 19:48:39] 2025-10-10 17:47:00,876 | INFO     | pid: 2104592
[2025-10-10 19:48:39] 2025-10-10 17:47:00,876 | INFO     | pgrp: 2104592
[2025-10-10 19:48:39] 2025-10-10 17:47:00,876 | INFO     | corecount: 12
[2025-10-10 19:48:39] 2025-10-10 17:47:00,876 | INFO     | event service: False
[2025-10-10 19:48:39] 2025-10-10 17:47:00,876 | INFO     | sizes: {0: 2348631, 1: 2348886, 2: 2348914, 13: 2348914, 24: 2348970, 34: 2348998, 44: 2349416, 45: 2349444, 6707: 2376620, 6710: 2385620, 6714: 2385676, 6762: 238
[2025-10-10 19:48:39] 2025-10-10 17:47:00,887 | INFO     | --------------------------------------------------
[2025-10-10 19:48:39] 2025-10-10 17:47:00,887 | INFO     | 
[2025-10-10 19:48:39] 2025-10-10 17:47:00,887 | INFO     | executing command: ls -lF /scratch/.boinc/slots/0
[2025-10-10 19:48:39] 2025-10-10 17:47:01,051 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 19:48:39] 2025-10-10 17:47:01,051 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 19:48:39] 2025-10-10 17:47:01,051 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 19:48:39] 2025-10-10 17:47:01,052 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 19:48:39] 2025-10-10 17:47:01,052 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 19:48:39] 2025-10-10 17:47:01,052 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 19:48:39] 2025-10-10 17:47:01,052 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 19:48:39] 2025-10-10 17:47:01,052 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 19:48:39] 2025-10-10 17:47:01,052 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 19:48:39] 2025-10-10 17:47:01,052 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 19:48:39] 2025-10-10 17:47:01,052 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 19:48:39] 2025-10-10 17:47:01,052 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 19:48:39] 2025-10-10 17:47:01,053 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 19:48:39] 2025-10-10 17:47:01,054 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 19:48:39] 2025-10-10 17:47:01,054 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 19:48:39] 2025-10-10 17:47:01,054 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 19:48:39] 2025-10-10 17:47:01,054 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 19:48:39] 2025-10-10 17:47:01,054 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 19:48:39] 2025-10-10 17:47:01,054 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 19:48:39] 2025-10-10 17:47:01,054 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 19:48:39] 2025-10-10 17:47:01,054 | INFO     | job 6837364691 has completed (purged errors)
[2025-10-10 19:48:39] 2025-10-10 17:47:01,054 | INFO     | overall cleanup function is called
[2025-10-10 19:48:39] 2025-10-10 17:47:02,097 | INFO     | --- collectZombieJob: --- 10, [2104592]
[2025-10-10 19:48:39] 2025-10-10 17:47:02,098 | INFO     | zombie collector waiting for pid 2104592
[2025-10-10 19:48:39] 2025-10-10 17:47:02,098 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 19:48:39] 2025-10-10 17:47:02,098 | INFO     | collected zombie processes
[2025-10-10 19:48:39] 2025-10-10 17:47:02,098 | INFO     | will attempt to kill all subprocesses of pid=2104592
[2025-10-10 19:48:39] 2025-10-10 17:47:02,664 | INFO     | PID=2078684 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 19:48:39] 2025-10-10 17:47:02,664 | INFO     | .. there are 82 such processes running
[2025-10-10 19:48:39] 2025-10-10 17:47:03,754 | INFO     | process IDs to be killed: [2104592] (in reverse order)
[2025-10-10 19:48:39] 2025-10-10 17:47:04,459 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 19:48:39] 2025-10-10 17:47:04,460 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 19:48:39] 2025-10-10 17:47:04,545 | INFO     | did not find any defunct processes belonging to 2104592
[2025-10-10 19:48:39] 2025-10-10 17:47:04,602 | INFO     | did not find any defunct processes belonging to 2104592
[2025-10-10 19:48:39] 2025-10-10 17:47:04,603 | INFO     | ready for new job
[2025-10-10 19:48:39] 2025-10-10 17:47:04,603 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 19:48:39] 2025-10-10 17:47:04,611 | INFO     | ***************************************
[2025-10-10 19:48:39] 2025-10-10 17:47:04,611 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 19:48:39] 2025-10-10 17:47:04,611 | INFO     | ***************************************
[2025-10-10 19:48:39] 2025-10-10 17:47:04,611 | INFO     | 
[2025-10-10 19:48:39] 2025-10-10 17:47:04,622 | INFO     | architecture information:
[2025-10-10 19:48:39] 2025-10-10 17:47:04,633 | INFO     | executing command: cat /etc/os-release
[2025-10-10 19:48:39] 2025-10-10 17:47:04,721 | INFO     | cat /etc/os-release:
[2025-10-10 19:48:39] NAME="CentOS Linux"
[2025-10-10 19:48:39] VERSION="7 (Core)"
[2025-10-10 19:48:39] ID="centos"
[2025-10-10 19:48:39] ID_LIKE="rhel fedora"
[2025-10-10 19:48:39] VERSION_ID="7"
[2025-10-10 19:48:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 19:48:39] ANSI_COLOR="0;31"
[2025-10-10 19:48:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 19:48:39] HOME_URL="https://www.centos.org/"
[2025-10-10 19:48:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 19:48:39] 
[2025-10-10 19:48:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 19:48:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 19:48:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 19:48:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 19:48:39] 
[2025-10-10 19:48:39] 2025-10-10 17:47:04,721 | INFO     | ***************************************
[2025-10-10 19:48:39] 2025-10-10 17:47:05,224 | INFO     | executing command: df -mP /scratch/.boinc/slots/0
[2025-10-10 19:48:39] 2025-10-10 17:47:05,328 | INFO     | sufficient remaining disk space (1659799339008 B)
[2025-10-10 19:48:39] 2025-10-10 17:47:05,328 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 19:48:39] 2025-10-10 17:47:05,328 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 19:48:39] 2025-10-10 17:47:05,328 | INFO     | update_server=False
[2025-10-10 19:48:39] 2025-10-10 17:47:05,329 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 19:48:39] 2025-10-10 17:47:05,330 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 19:48:39] 2025-10-10 17:47:05,333 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 19:48:39] 2025-10-10 17:47:05,333 | INFO     | aborting loop
[2025-10-10 19:48:39] 2025-10-10 17:47:05,890 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 19:48:39] 2025-10-10 17:47:05,963 | INFO     | all job control threads have been joined
[2025-10-10 19:48:39] 2025-10-10 17:47:05,983 | INFO     | all payload control threads have been joined
[2025-10-10 19:48:39] 2025-10-10 17:47:06,236 | INFO     | all data control threads have been joined
[2025-10-10 19:48:39] 2025-10-10 17:47:06,335 | INFO     | [job] retrieve thread has finished
[2025-10-10 19:48:39] 2025-10-10 17:47:06,343 | INFO     | [job] job monitor thread has finished
[2025-10-10 19:48:39] 2025-10-10 17:47:06,630 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 19:48:39] 2025-10-10 17:47:06,642 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 19:48:39] 2025-10-10 17:47:06,899 | INFO     | [job] queue monitor thread has finished
[2025-10-10 19:48:39] 2025-10-10 17:47:06,972 | INFO     | [job] control thread has finished
[2025-10-10 19:48:39] 2025-10-10 17:47:06,991 | INFO     | [payload] control thread has finished
[2025-10-10 19:48:39] 2025-10-10 17:47:07,047 | INFO     | [payload] validate_post thread has finished
[2025-10-10 19:48:39] 2025-10-10 17:47:07,201 | INFO     | [job] validate thread has finished
[2025-10-10 19:48:39] 2025-10-10 17:47:07,245 | INFO     | [data] control thread has finished
[2025-10-10 19:48:39] 2025-10-10 17:47:07,281 | INFO     | [data] copytool_in thread has finished
[2025-10-10 19:48:39] 2025-10-10 17:47:07,322 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 19:48:39] 2025-10-10 17:47:07,337 | INFO     | [data] copytool_out thread has finished
[2025-10-10 19:48:39] 2025-10-10 17:47:07,684 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 19:48:39] 2025-10-10 17:47:07,767 | INFO     | [payload] failed_post thread has finished
[2025-10-10 19:48:39] 2025-10-10 17:47:08,476 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 19:48:39] 2025-10-10 17:47:12,484 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 19:48:39] 2025-10-10 17:47:36,862 | INFO     | PID=2078684 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 19:48:39] 2025-10-10 17:47:36,862 | INFO     | .. there are 82 such processes running
[2025-10-10 19:48:39] 2025-10-10 17:47:36,862 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 19:48:39] 2025-10-10 17:47:36,862 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 19:48:39] 2025-10-10 17:47:36,863 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 19:48:39] 2025-10-10 17:47:58,604 | INFO     | [monitor] cgroup control has ended
[2025-10-10 19:48:39] 2025-10-10 17:47:59,010 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140531665942336)>', '<ExcThread(monitor, started 140531178919680)>']
[2025-10-10 19:48:39] 2025-10-10 17:47:59,024 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 19:48:39] 2025-10-10 17:47:59,025 | INFO     | [monitor] control thread has ended
[2025-10-10 19:48:39] 2025-10-10 17:48:04,039 | INFO     | all workflow threads have been joined
[2025-10-10 19:48:39] 2025-10-10 17:48:04,039 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 19:48:39] 2025-10-10 17:48:04,039 | INFO     | traces error code: 0
[2025-10-10 19:48:39] 2025-10-10 17:48:04,039 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 19:48:39] 2025-10-10 17:48:04,565 [wrapper] ==== pilot stdout END ====
[2025-10-10 19:48:39] 2025-10-10 17:48:04,575 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 19:48:39] 2025-10-10 17:48:04,579 [wrapper] pilotpid: 2078684
[2025-10-10 19:48:39] 2025-10-10 17:48:04,625 [wrapper] Pilot exit status: 0
[2025-10-10 19:48:39] 2025-10-10 17:48:04,831 [wrapper] pandaids: 6837364691
[2025-10-10 19:48:39] 2025-10-10 17:48:05,305 [wrapper] cleanup supervisor_pilot 2542413 2078685
[2025-10-10 19:48:39] 2025-10-10 17:48:05,356 [wrapper] Test setup, not cleaning
[2025-10-10 19:48:39] 2025-10-10 17:48:05,406 [wrapper] apfmon messages muted
[2025-10-10 19:48:39] 2025-10-10 17:48:05,443 [wrapper] ==== wrapper stdout END ====
[2025-10-10 19:48:39] 2025-10-10 17:48:05,481 [wrapper] ==== wrapper stderr END ====
[2025-10-10 19:48:39]  *** Error codes and diagnostics ***
[2025-10-10 19:48:39]     "exeErrorCode": 0,
[2025-10-10 19:48:39]     "exeErrorDiag": "",
[2025-10-10 19:48:39]     "pilotErrorCode": 0,
[2025-10-10 19:48:39]     "pilotErrorDiag": "",
[2025-10-10 19:48:39]  *** Listing of results directory ***
[2025-10-10 19:48:39] total 411968
[2025-10-10 19:48:39] -rw-r--r-- 1 boinc boinc      5112 Oct 10 00:12 queuedata.json
[2025-10-10 19:48:39] -rwx------ 1 boinc boinc     36292 Oct 10 00:12 runpilot2-wrapper.sh
[2025-10-10 19:48:39] -rw-r--r-- 1 boinc boinc    557409 Oct 10 00:12 pilot3.tar.gz
[2025-10-10 19:48:39] -rw-r--r-- 1 boinc boinc       100 Oct 10 16:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 19:48:39] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 16:58 run_atlas
[2025-10-10 19:48:39] -rw-r--r-- 1 boinc boinc       105 Oct 10 16:58 job.xml
[2025-10-10 19:48:39] -rw-r--r-- 1 boinc boinc      6665 Oct 10 16:58 init_data.xml
[2025-10-10 19:48:39] -rw-r--r-- 2 boinc boinc 219245264 Oct 10 16:58 EVNT.46676267._001140.pool.root.1
[2025-10-10 19:48:39] -rw-r--r-- 2 boinc boinc     15120 Oct 10 16:58 start_atlas.sh
[2025-10-10 19:48:39] drwxrwx--x 2 boinc boinc      4096 Oct 10 16:58 shared
[2025-10-10 19:48:39] -rw-r--r-- 2 boinc boinc    569675 Oct 10 16:58 input.tar.gz
[2025-10-10 19:48:39] -rw-r--r-- 1 boinc boinc         0 Oct 10 16:58 boinc_lockfile
[2025-10-10 19:48:39] -rw-r--r-- 1 boinc boinc      2550 Oct 10 17:51 pandaJob.out
[2025-10-10 19:48:39] -rw------- 1 boinc boinc    975533 Oct 10 17:52 agis_schedconf.cvmfs.json
[2025-10-10 19:48:39] -rw------- 1 boinc boinc   1560580 Oct 10 17:52 agis_ddmendpoints.agis.ALL.json
[2025-10-10 19:48:39] drwx------ 5 boinc boinc      4096 Oct 10 17:52 pilot3
[2025-10-10 19:48:39] -rw------- 1 boinc boinc 196022008 Oct 10 19:44 HITS.46676269._027129.pool.root.1
[2025-10-10 19:48:39] -rw-r--r-- 1 boinc boinc       529 Oct 10 19:44 boinc_task_state.xml
[2025-10-10 19:48:39] -rw------- 1 boinc boinc      1023 Oct 10 19:46 memory_monitor_summary.json
[2025-10-10 19:48:39] -rw------- 1 boinc boinc    424431 Oct 10 19:46 log.46676269._027129.job.log.tgz.1
[2025-10-10 19:48:39] -rw------- 1 boinc boinc        95 Oct 10 19:46 pilot_heartbeat.json
[2025-10-10 19:48:39] -rw------- 1 boinc boinc      7781 Oct 10 19:47 heartbeat.json
[2025-10-10 19:48:39] -rw------- 1 boinc boinc      4827 Oct 10 19:48 pilotlog.txt
[2025-10-10 19:48:39] -rw------- 1 boinc boinc    914058 Oct 10 19:48 log.46676269._027129.job.log.1
[2025-10-10 19:48:39] -rw------- 1 boinc boinc       357 Oct 10 19:48 output.list
[2025-10-10 19:48:39] -rw-r--r-- 1 boinc boinc       620 Oct 10 19:48 runtime_log
[2025-10-10 19:48:39] -rw------- 1 boinc boinc   1361920 Oct 10 19:48 result.tar.gz
[2025-10-10 19:48:39] -rw------- 1 boinc boinc       664 Oct 10 19:48 Y6cMDmk3DR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6TbNDmjk0qOn.diag
[2025-10-10 19:48:39] -rw-r--r-- 1 boinc boinc      8764 Oct 10 19:48 runtime_log.err
[2025-10-10 19:48:39] -rw-r--r-- 1 boinc boinc        26 Oct 10 19:48 wrapper_checkpoint.txt
[2025-10-10 19:48:39] -rw-r--r-- 1 boinc boinc      8192 Oct 10 19:48 boinc_mmap_file
[2025-10-10 19:48:39] -rw-r--r-- 1 boinc boinc     21156 Oct 10 19:48 stderr.txt
[2025-10-10 19:48:39] HITS file was successfully produced:
[2025-10-10 19:48:39] -rw------- 1 boinc boinc 196022008 Oct 10 19:44 shared/HITS.pool.root.1
[2025-10-10 19:48:39]  *** Contents of shared directory: ***
[2025-10-10 19:48:39] total 407452
[2025-10-10 19:48:39] -rw-r--r-- 2 boinc boinc 219245264 Oct 10 16:58 ATLAS.root_0
[2025-10-10 19:48:39] -rw-r--r-- 2 boinc boinc     15120 Oct 10 16:58 start_atlas.sh
[2025-10-10 19:48:39] -rw-r--r-- 2 boinc boinc    569675 Oct 10 16:58 input.tar.gz
[2025-10-10 19:48:39] -rw------- 1 boinc boinc 196022008 Oct 10 19:44 HITS.pool.root.1
[2025-10-10 19:48:39] -rw------- 1 boinc boinc   1361920 Oct 10 19:48 result.tar.gz
19:48:41 (1958197): run_atlas exited; CPU time 38976.281175
19:48:41 (1958197): called boinc_finish(0)

</stderr_txt>
]]>

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