Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
20:17:18 (747493): wrapper (7.7.26015): starting
20:17:18 (747493): wrapper: running run_atlas (--nthreads 4)
[2025-10-10 20:17:18] Arguments: --nthreads 4
[2025-10-10 20:17:18] Threads: 4
[2025-10-10 20:17:18] Checking for CVMFS
[2025-10-10 20:17:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 20:17:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 20:17:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 20:17:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 20:17:18] 2.13.1.0 3889163 1683 61212 151558 2 9 2310447 4096000 922 130560 0 3126518 99.996 59740 1548 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-10 20:17:18] CVMFS is ok
[2025-10-10 20:17:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 20:17:18] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-10 20:17:18] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-10 20:17:18] Further information can be found at the LHC@home message board.
[2025-10-10 20:17:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 20:17:18] Checking for apptainer binary...
[2025-10-10 20:17:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 20:17:18] Running /usr/bin/apptainer --version
[2025-10-10 20:17:18] apptainer version 1.2.3
[2025-10-10 20:17:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 20:17:18] Ryzen-7-7700-Zen4-Deb12
[2025-10-10 20:17:18] apptainer works
[2025-10-10 20:17:18] Set ATHENA_PROC_NUMBER=4
[2025-10-10 20:17:18] Set ATHENA_CORE_NUMBER=4
[2025-10-10 20:17:18] Starting ATLAS job with PandaID=6826566500
[2025-10-10 20:17:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 21:49:37]  *** The last 200 lines of the pilot log: ***
[2025-10-10 21:49:37]  protocol_id=None
[2025-10-10 21:49:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-10 21:49:37]  replicas=None
[2025-10-10 21:49:37]  scope=mc23_13p6TeV
[2025-10-10 21:49:37]  status=None
[2025-10-10 21:49:37]  status_code=0
[2025-10-10 21:49:37]  storage_token=
[2025-10-10 21:49:37]  surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-6826566500/log.46373048._086995.job.log.tgz.1
[2025-10-10 21:49:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/16/d8/log.46373048._086995.job.log.tgz.1
[2025-10-10 21:49:37]  workdir=None
[2025-10-10 21:49:37] ]
[2025-10-10 21:49:37] 2025-10-10 19:48:35,123 | INFO     | transferring file log.46373048._086995.job.log.tgz.1 from /var/lib/boinc-client/slots/2/PanDA_Pilot-6826566500/log.46373048._086995.job.log.tgz.1 to /var/lib/boinc
[2025-10-10 21:49:37] 2025-10-10 19:48:35,123 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-6826566500/log.46373048._086995.job.log.tgz.1 /var/lib/boinc-client/slots/2/log.463730
[2025-10-10 21:49:37] 2025-10-10 19:48:35,146 | INFO     | adding to output.list: log.46373048._086995.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/16/d8/log.46373048._086995.job.log.tg
[2025-10-10 21:49:37] 2025-10-10 19:48:35,147 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 21:49:37] 2025-10-10 19:48:35,147 | INFO     | summary of transferred files:
[2025-10-10 21:49:37] 2025-10-10 19:48:35,147 | INFO     |  -- lfn=log.46373048._086995.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 21:49:37] 2025-10-10 19:48:35,147 | INFO     | stage-out finished correctly
[2025-10-10 21:49:37] 2025-10-10 19:48:35,473 | INFO     | time since job start (5472s) is within the limit (172800.0s)
[2025-10-10 21:49:37] 2025-10-10 19:48:36,014 | WARNING  | process 757942 can no longer be monitored (due to stat problems) - aborting
[2025-10-10 21:49:37] 2025-10-10 19:48:36,014 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6826566500/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 21:49:37] 2025-10-10 19:48:36,038 | INFO     | number of running child processes to parent process 757942: 1
[2025-10-10 21:49:37] 2025-10-10 19:48:36,039 | INFO     | maximum number of monitored processes: 6
[2025-10-10 21:49:37] 2025-10-10 19:48:37,477 | INFO     | time since job start (5474s) is within the limit (172800.0s)
[2025-10-10 21:49:37] 2025-10-10 19:48:38,187 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 21:49:37] 2025-10-10 19:48:38,320 | INFO     | job 6826566500 has state=finished
[2025-10-10 21:49:37] 2025-10-10 19:48:38,321 | INFO     | preparing for final server update for job 6826566500 in state='finished'
[2025-10-10 21:49:37] 2025-10-10 19:48:38,321 | INFO     | this job has now completed (state=finished)
[2025-10-10 21:49:37] 2025-10-10 19:48:38,321 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 21:49:37] 2025-10-10 19:48:38,321 | INFO     | log transfer has been attempted: DONE
[2025-10-10 21:49:37] 2025-10-10 19:48:38,321 | INFO     | job 6826566500 has finished - writing final server update
[2025-10-10 21:49:37] 2025-10-10 19:48:38,321 | INFO     | total number of processed events: 400 (read)
[2025-10-10 21:49:37] 2025-10-10 19:48:38,322 | INFO     | executing command: lscpu
[2025-10-10 21:49:37] 2025-10-10 19:48:38,335 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 21:49:37] 2025-10-10 19:48:38,540 | INFO     | monitor loop #419: job 0:6826566500 is in state 'finished'
[2025-10-10 21:49:37] 2025-10-10 19:48:38,541 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 21:49:37] 2025-10-10 19:48:39,481 | INFO     | time since job start (5476s) is within the limit (172800.0s)
[2025-10-10 21:49:37] 2025-10-10 19:48:40,073 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-10 21:49:37] 2025-10-10 19:48:40,074 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4984.2879375
[2025-10-10 21:49:37] 2025-10-10 19:48:40,075 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6826566500/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 21:49:37] 2025-10-10 19:48:40,076 | INFO     | extracted standard info from prmon json
[2025-10-10 21:49:37] 2025-10-10 19:48:40,076 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 21:49:37] 2025-10-10 19:48:40,076 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 21:49:37] 2025-10-10 19:48:40,076 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 21:49:37] 2025-10-10 19:48:40,076 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 21:49:37] 2025-10-10 19:48:40,076 | INFO     | fitting pss+swap vs Time
[2025-10-10 21:49:37] 2025-10-10 19:48:40,076 | INFO     | sum of square deviations: 177275882.0
[2025-10-10 21:49:37] 2025-10-10 19:48:40,076 | INFO     | sum of deviations: -8165032512.0
[2025-10-10 21:49:37] 2025-10-10 19:48:40,076 | INFO     | mean x: 1760123067.0
[2025-10-10 21:49:37] 2025-10-10 19:48:40,077 | INFO     | mean y: 2486934.939759036
[2025-10-10 21:49:37] 2025-10-10 19:48:40,077 | INFO     | -- intersect: 81070830270.98451
[2025-10-10 21:49:37] 2025-10-10 19:48:40,077 | INFO     | intersect: 81070830270.98451
[2025-10-10 21:49:37] 2025-10-10 19:48:40,077 | INFO     | chi2: 0.04506488480527734
[2025-10-10 21:49:37] 2025-10-10 19:48:40,077 | INFO     | -- intersect: 81070830270.98451
[2025-10-10 21:49:37] 2025-10-10 19:48:40,077 | INFO     | current memory leak: -46.06 B/s (using 83 data points, chi2=0.05)
[2025-10-10 21:49:37] 2025-10-10 19:48:40,077 | INFO     | could have reported an average CPU frequency of 4914 MHz (7 samples)
[2025-10-10 21:49:37] 2025-10-10 19:48:40,077 | INFO     | ..............................
[2025-10-10 21:49:37] 2025-10-10 19:48:40,077 | INFO     | . Timing measurements:
[2025-10-10 21:49:37] 2025-10-10 19:48:40,077 | INFO     | . get job = 0 s
[2025-10-10 21:49:37] 2025-10-10 19:48:40,077 | INFO     | . initial setup = 1 s
[2025-10-10 21:49:37] 2025-10-10 19:48:40,077 | INFO     | . payload setup = 2 s
[2025-10-10 21:49:37] 2025-10-10 19:48:40,077 | INFO     | . stage-in = 0 s
[2025-10-10 21:49:37] 2025-10-10 19:48:40,077 | INFO     | . payload execution = 5453 s
[2025-10-10 21:49:37] 2025-10-10 19:48:40,077 | INFO     | . stage-out = 0 s
[2025-10-10 21:49:37] 2025-10-10 19:48:40,077 | INFO     | . log creation = 0 s
[2025-10-10 21:49:37] 2025-10-10 19:48:40,077 | INFO     | ..............................
[2025-10-10 21:49:37] 2025-10-10 19:48:40,118 | INFO     | 
[2025-10-10 21:49:37] 2025-10-10 19:48:40,118 | INFO     | job summary report
[2025-10-10 21:49:37] 2025-10-10 19:48:40,118 | INFO     | --------------------------------------------------
[2025-10-10 21:49:37] 2025-10-10 19:48:40,118 | INFO     | PanDA job id: 6826566500
[2025-10-10 21:49:37] 2025-10-10 19:48:40,118 | INFO     | task id: 46373048
[2025-10-10 21:49:37] 2025-10-10 19:48:40,118 | INFO     | errors: (none)
[2025-10-10 21:49:37] 2025-10-10 19:48:40,118 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 21:49:37] 2025-10-10 19:48:40,118 | INFO     | pilot state: finished 
[2025-10-10 21:49:37] 2025-10-10 19:48:40,118 | INFO     | transexitcode: 0
[2025-10-10 21:49:37] 2025-10-10 19:48:40,118 | INFO     | exeerrorcode: 0
[2025-10-10 21:49:37] 2025-10-10 19:48:40,118 | INFO     | exeerrordiag: 
[2025-10-10 21:49:37] 2025-10-10 19:48:40,118 | INFO     | exitcode: 0
[2025-10-10 21:49:37] 2025-10-10 19:48:40,118 | INFO     | exitmsg: OK
[2025-10-10 21:49:37] 2025-10-10 19:48:40,118 | INFO     | cpuconsumptiontime: 21217 s
[2025-10-10 21:49:37] 2025-10-10 19:48:40,118 | INFO     | nevents: 400
[2025-10-10 21:49:37] 2025-10-10 19:48:40,118 | INFO     | neventsw: 0
[2025-10-10 21:49:37] 2025-10-10 19:48:40,118 | INFO     | pid: 757942
[2025-10-10 21:49:37] 2025-10-10 19:48:40,118 | INFO     | pgrp: 757942
[2025-10-10 21:49:37] 2025-10-10 19:48:40,118 | INFO     | corecount: 4
[2025-10-10 21:49:37] 2025-10-10 19:48:40,118 | INFO     | event service: False
[2025-10-10 21:49:37] 2025-10-10 19:48:40,118 | INFO     | sizes: {0: 2348847, 2: 2349109, 11: 2349137, 5459: 2375821, 5460: 2384833, 5463: 2384889, 5465: 2385211}
[2025-10-10 21:49:37] 2025-10-10 19:48:40,118 | INFO     | --------------------------------------------------
[2025-10-10 21:49:37] 2025-10-10 19:48:40,118 | INFO     | 
[2025-10-10 21:49:37] 2025-10-10 19:48:40,118 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-10-10 21:49:37] 2025-10-10 19:48:40,129 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 21:49:37] 2025-10-10 19:48:40,129 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 21:49:37] 2025-10-10 19:48:40,129 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 21:49:37] 2025-10-10 19:48:40,129 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 21:49:37] 2025-10-10 19:48:40,129 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 21:49:37] 2025-10-10 19:48:40,130 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 21:49:37] 2025-10-10 19:48:40,130 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 21:49:37] 2025-10-10 19:48:40,130 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 21:49:37] 2025-10-10 19:48:40,130 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 21:49:37] 2025-10-10 19:48:40,130 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 21:49:37] 2025-10-10 19:48:40,130 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 21:49:37] 2025-10-10 19:48:40,130 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 21:49:37] 2025-10-10 19:48:40,130 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 21:49:37] 2025-10-10 19:48:40,130 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 21:49:37] 2025-10-10 19:48:40,130 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 21:49:37] 2025-10-10 19:48:40,130 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 21:49:37] 2025-10-10 19:48:40,130 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 21:49:37] 2025-10-10 19:48:40,130 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 21:49:37] 2025-10-10 19:48:40,130 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 21:49:37] 2025-10-10 19:48:40,130 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 21:49:37] 2025-10-10 19:48:40,130 | INFO     | job 6826566500 has completed (purged errors)
[2025-10-10 21:49:37] 2025-10-10 19:48:40,130 | INFO     | overall cleanup function is called
[2025-10-10 21:49:37] 2025-10-10 19:48:41,132 | INFO     | --- collectZombieJob: --- 10, [757942]
[2025-10-10 21:49:37] 2025-10-10 19:48:41,133 | INFO     | zombie collector waiting for pid 757942
[2025-10-10 21:49:37] 2025-10-10 19:48:41,133 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 21:49:37] 2025-10-10 19:48:41,133 | INFO     | collected zombie processes
[2025-10-10 21:49:37] 2025-10-10 19:48:41,133 | INFO     | will attempt to kill all subprocesses of pid=757942
[2025-10-10 21:49:37] 2025-10-10 19:48:41,154 | INFO     | process IDs to be killed: [757942] (in reverse order)
[2025-10-10 21:49:37] 2025-10-10 19:48:41,174 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 21:49:37] 2025-10-10 19:48:41,174 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 21:49:37] 2025-10-10 19:48:41,175 | INFO     | did not find any defunct processes belonging to 757942
[2025-10-10 21:49:37] 2025-10-10 19:48:41,176 | INFO     | did not find any defunct processes belonging to 757942
[2025-10-10 21:49:37] 2025-10-10 19:48:41,176 | INFO     | ready for new job
[2025-10-10 21:49:37] 2025-10-10 19:48:41,176 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 21:49:37] 2025-10-10 19:48:41,176 | INFO     | ***************************************
[2025-10-10 21:49:37] 2025-10-10 19:48:41,180 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-10 21:49:37] 2025-10-10 19:48:41,180 | INFO     | ***************************************
[2025-10-10 21:49:37] 2025-10-10 19:48:41,180 | INFO     | 
[2025-10-10 21:49:37] 2025-10-10 19:48:41,181 | INFO     | architecture information:
[2025-10-10 21:49:37] 2025-10-10 19:48:41,181 | INFO     | executing command: cat /etc/os-release
[2025-10-10 21:49:37] 2025-10-10 19:48:41,188 | INFO     | cat /etc/os-release:
[2025-10-10 21:49:37] NAME="CentOS Linux"
[2025-10-10 21:49:37] VERSION="7 (Core)"
[2025-10-10 21:49:37] ID="centos"
[2025-10-10 21:49:37] ID_LIKE="rhel fedora"
[2025-10-10 21:49:37] VERSION_ID="7"
[2025-10-10 21:49:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 21:49:37] ANSI_COLOR="0;31"
[2025-10-10 21:49:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 21:49:37] HOME_URL="https://www.centos.org/"
[2025-10-10 21:49:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 21:49:37] 
[2025-10-10 21:49:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 21:49:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 21:49:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 21:49:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 21:49:37] 
[2025-10-10 21:49:37] 2025-10-10 19:48:41,189 | INFO     | ***************************************
[2025-10-10 21:49:37] 2025-10-10 19:48:41,691 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-10-10 21:49:37] 2025-10-10 19:48:41,699 | INFO     | sufficient remaining disk space (884600733696 B)
[2025-10-10 21:49:37] 2025-10-10 19:48:41,699 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 21:49:37] 2025-10-10 19:48:41,699 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 21:49:37] 2025-10-10 19:48:41,699 | INFO     | update_server=False
[2025-10-10 21:49:37] 2025-10-10 19:48:41,699 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 21:49:37] 2025-10-10 19:48:41,699 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 21:49:37] 2025-10-10 19:48:41,804 | INFO     | all data control threads have been joined
[2025-10-10 21:49:37] 2025-10-10 19:48:42,048 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 21:49:37] 2025-10-10 19:48:42,048 | INFO     | aborting loop
[2025-10-10 21:49:37] 2025-10-10 19:48:42,650 | INFO     | all payload control threads have been joined
[2025-10-10 21:49:37] 2025-10-10 19:48:42,700 | INFO     | [job] queue monitor thread has finished
[2025-10-10 21:49:37] 2025-10-10 19:48:42,701 | INFO     | [job] retrieve thread has finished
[2025-10-10 21:49:37] 2025-10-10 19:48:42,806 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 21:49:37] 2025-10-10 19:48:42,808 | INFO     | [data] control thread has finished
[2025-10-10 21:49:37] 2025-10-10 19:48:42,827 | INFO     | all job control threads have been joined
[2025-10-10 21:49:37] 2025-10-10 19:48:43,052 | INFO     | [job] job monitor thread has finished
[2025-10-10 21:49:37] 2025-10-10 19:48:43,088 | INFO     | [data] copytool_in thread has finished
[2025-10-10 21:49:37] 2025-10-10 19:48:43,184 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 21:49:37] 2025-10-10 19:48:43,384 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 21:49:37] 2025-10-10 19:48:43,616 | INFO     | [payload] validate_post thread has finished
[2025-10-10 21:49:37] 2025-10-10 19:48:43,655 | INFO     | [payload] control thread has finished
[2025-10-10 21:49:37] 2025-10-10 19:48:43,668 | INFO     | [job] validate thread has finished
[2025-10-10 21:49:37] 2025-10-10 19:48:43,828 | INFO     | [job] control thread has finished
[2025-10-10 21:49:37] 2025-10-10 19:48:44,020 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 21:49:37] 2025-10-10 19:48:44,032 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 21:49:37] 2025-10-10 19:48:44,160 | INFO     | [payload] failed_post thread has finished
[2025-10-10 21:49:37] 2025-10-10 19:48:44,223 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 21:49:37] 2025-10-10 19:48:45,188 | INFO     | [data] copytool_out thread has finished
[2025-10-10 21:49:37] 2025-10-10 19:48:48,229 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 21:49:37] 2025-10-10 19:49:12,578 | INFO     | PID=751248 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 21:49:37] 2025-10-10 19:49:12,601 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 21:49:37] 2025-10-10 19:49:12,601 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 21:49:37] 2025-10-10 19:49:12,602 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 21:49:37] 2025-10-10 19:49:31,744 | INFO     | [monitor] cgroup control has ended
[2025-10-10 21:49:37] 2025-10-10 19:49:32,748 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139840951347008)>', '<ExcThread(monitor, started 139840595138304)>']
[2025-10-10 21:49:37] 2025-10-10 19:49:33,684 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 21:49:37] 2025-10-10 19:49:33,685 | INFO     | [monitor] control thread has ended
[2025-10-10 21:49:37] 2025-10-10 19:49:37,772 | INFO     | all workflow threads have been joined
[2025-10-10 21:49:37] 2025-10-10 19:49:37,773 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 21:49:37] 2025-10-10 19:49:37,773 | INFO     | traces error code: 0
[2025-10-10 21:49:37] 2025-10-10 19:49:37,773 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 21:49:37] 2025-10-10 19:49:37,843 [wrapper] ==== pilot stdout END ====
[2025-10-10 21:49:37] 2025-10-10 19:49:37,844 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 21:49:37] 2025-10-10 19:49:37,845 [wrapper] pilotpid: 751248
[2025-10-10 21:49:37] 2025-10-10 19:49:37,846 [wrapper] Pilot exit status: 0
[2025-10-10 21:49:37] 2025-10-10 19:49:37,851 [wrapper] pandaids: 6826566500
[2025-10-10 21:49:37] 2025-10-10 19:49:37,861 [wrapper] cleanup supervisor_pilot  803708 751249
[2025-10-10 21:49:37] 2025-10-10 19:49:37,862 [wrapper] Test setup, not cleaning
[2025-10-10 21:49:37] 2025-10-10 19:49:37,863 [wrapper] apfmon messages muted
[2025-10-10 21:49:37] 2025-10-10 19:49:37,864 [wrapper] ==== wrapper stdout END ====
[2025-10-10 21:49:37] 2025-10-10 19:49:37,865 [wrapper] ==== wrapper stderr END ====
[2025-10-10 21:49:37]  *** Error codes and diagnostics ***
[2025-10-10 21:49:37]     "exeErrorCode": 0,
[2025-10-10 21:49:37]     "exeErrorDiag": "",
[2025-10-10 21:49:37]     "pilotErrorCode": 0,
[2025-10-10 21:49:37]     "pilotErrorDiag": "",
[2025-10-10 21:49:37]  *** Listing of results directory ***
[2025-10-10 21:49:37] total 414472
[2025-10-10 21:49:37] -rw-r--r-- 1 boinc boinc    552446 Oct  1 21:53 pilot3.tar.gz
[2025-10-10 21:49:37] -rw-r--r-- 1 boinc boinc      5112 Oct  1 22:16 queuedata.json
[2025-10-10 21:49:37] -rwx------ 1 boinc boinc     36292 Oct  1 22:17 runpilot2-wrapper.sh
[2025-10-10 21:49:37] -rw-r--r-- 1 boinc boinc       100 Oct 10 20:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 21:49:37] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 20:17 run_atlas
[2025-10-10 21:49:37] -rw-r--r-- 1 boinc boinc       105 Oct 10 20:17 job.xml
[2025-10-10 21:49:37] -rw-r--r-- 2 boinc boinc 222967380 Oct 10 20:17 EVNT.46373045._002978.pool.root.1
[2025-10-10 21:49:37] -rw-r--r-- 2 boinc boinc     15120 Oct 10 20:17 start_atlas.sh
[2025-10-10 21:49:37] drwxrwx--x 2 boinc boinc      4096 Oct 10 20:17 shared
[2025-10-10 21:49:37] -rw-r--r-- 2 boinc boinc    565607 Oct 10 20:17 input.tar.gz
[2025-10-10 21:49:37] -rw-r--r-- 1 boinc boinc      6737 Oct 10 20:17 init_data.xml
[2025-10-10 21:49:37] -rw-r--r-- 1 boinc boinc         0 Oct 10 20:17 boinc_lockfile
[2025-10-10 21:49:37] -rw-r--r-- 1 boinc boinc      2537 Oct 10 20:17 pandaJob.out
[2025-10-10 21:49:37] -rw------- 1 boinc boinc    975525 Oct 10 20:17 agis_schedconf.cvmfs.json
[2025-10-10 21:49:37] -rw------- 1 boinc boinc   1560580 Oct 10 20:17 agis_ddmendpoints.agis.ALL.json
[2025-10-10 21:49:37] drwx------ 4 boinc boinc      4096 Oct 10 20:17 pilot3
[2025-10-10 21:49:37] -rw-r--r-- 1 boinc boinc       529 Oct 10 21:48 boinc_task_state.xml
[2025-10-10 21:49:37] -rw------- 1 boinc boinc 195385490 Oct 10 21:48 HITS.46373048._086995.pool.root.1
[2025-10-10 21:49:37] -rw------- 1 boinc boinc      1020 Oct 10 21:48 memory_monitor_summary.json
[2025-10-10 21:49:37] -rw------- 1 boinc boinc    269536 Oct 10 21:48 log.46373048._086995.job.log.tgz.1
[2025-10-10 21:49:37] -rw------- 1 boinc boinc      7755 Oct 10 21:48 heartbeat.json
[2025-10-10 21:49:37] -rw------- 1 boinc boinc        95 Oct 10 21:49 pilot_heartbeat.json
[2025-10-10 21:49:37] -rw-r--r-- 1 boinc boinc        27 Oct 10 21:49 wrapper_checkpoint.txt
[2025-10-10 21:49:37] -rw-r--r-- 1 boinc boinc      8192 Oct 10 21:49 boinc_mmap_file
[2025-10-10 21:49:37] -rw------- 1 boinc boinc      4755 Oct 10 21:49 pilotlog.txt
[2025-10-10 21:49:37] -rw------- 1 boinc boinc    816193 Oct 10 21:49 log.46373048._086995.job.log.1
[2025-10-10 21:49:37] -rw------- 1 boinc boinc       357 Oct 10 21:49 output.list
[2025-10-10 21:49:37] -rw-r--r-- 1 boinc boinc       620 Oct 10 21:49 runtime_log
[2025-10-10 21:49:37] -rw------- 1 boinc boinc   1105920 Oct 10 21:49 result.tar.gz
[2025-10-10 21:49:37] -rw-r--r-- 1 boinc boinc      8826 Oct 10 21:49 runtime_log.err
[2025-10-10 21:49:37] -rw------- 1 boinc boinc       655 Oct 10 21:49 eEIMDm2RIO8n9Rq4apOajLDm4fhM0noT9bVof3QYDmdH8LDmHgg2Io.diag
[2025-10-10 21:49:37] -rw-r--r-- 1 boinc boinc     21901 Oct 10 21:49 stderr.txt
[2025-10-10 21:49:37] HITS file was successfully produced:
[2025-10-10 21:49:37] -rw------- 1 boinc boinc 195385490 Oct 10 21:48 shared/HITS.pool.root.1
[2025-10-10 21:49:37]  *** Contents of shared directory: ***
[2025-10-10 21:49:37] total 410212
[2025-10-10 21:49:37] -rw-r--r-- 2 boinc boinc 222967380 Oct 10 20:17 ATLAS.root_0
[2025-10-10 21:49:37] -rw-r--r-- 2 boinc boinc     15120 Oct 10 20:17 start_atlas.sh
[2025-10-10 21:49:37] -rw-r--r-- 2 boinc boinc    565607 Oct 10 20:17 input.tar.gz
[2025-10-10 21:49:37] -rw------- 1 boinc boinc 195385490 Oct 10 21:48 HITS.pool.root.1
[2025-10-10 21:49:37] -rw------- 1 boinc boinc   1105920 Oct 10 21:49 result.tar.gz
21:49:39 (747493): run_atlas exited; CPU time 21232.764291
21:49:39 (747493): called boinc_finish(0)

</stderr_txt>
]]>

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