Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:58:16 (2626645): wrapper (7.7.26015): starting
09:58:16 (2626645): wrapper: running run_atlas (--nthreads 4)
[2025-10-10 09:58:16] Arguments: --nthreads 4
[2025-10-10 09:58:16] Threads: 4
[2025-10-10 09:58:16] Checking for CVMFS
[2025-10-10 09:58:16] No cvmfs_config command found, will try listing directly
[2025-10-10 09:58:16] CVMFS is ok
[2025-10-10 09:58:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 09:58:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 09:58:16] Further information can be found at the LHC@home message board.
[2025-10-10 09:58:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 09:58:16] Checking for apptainer binary...
[2025-10-10 09:58:16] which: no apptainer in ((null))
[2025-10-10 09:58:16] apptainer is not installed, using version from CVMFS
[2025-10-10 09:58:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 09:58:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-10-10 09:58:16] apptainer works
[2025-10-10 09:58:16] Set ATHENA_PROC_NUMBER=4
[2025-10-10 09:58:16] Set ATHENA_CORE_NUMBER=4
[2025-10-10 09:58:16] Starting ATLAS job with PandaID=6837377883
[2025-10-10 09:58:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 13:06:48]  *** The last 200 lines of the pilot log: ***
[2025-10-10 13:06:48] 2025-10-10 10:55:13,591 | INFO     | fitting pss+swap vs Time
[2025-10-10 13:06:48] 2025-10-10 10:55:13,591 | INFO     | sum of square deviations: 1633472487.5
[2025-10-10 13:06:48] 2025-10-10 10:55:13,592 | INFO     | sum of deviations: 13258657928.000002
[2025-10-10 13:06:48] 2025-10-10 10:55:13,592 | INFO     | mean x: 1760088411.5
[2025-10-10 13:06:48] 2025-10-10 10:55:13,592 | INFO     | mean y: 2300913.735632184
[2025-10-10 13:06:48] 2025-10-10 10:55:13,592 | INFO     | -- intersect: -14284080001.581379
[2025-10-10 13:06:48] 2025-10-10 10:55:13,592 | INFO     | intersect: -14284080001.581379
[2025-10-10 13:06:48] 2025-10-10 10:55:13,593 | INFO     | chi2: 2.1553212311546557
[2025-10-10 13:06:48] 2025-10-10 10:55:13,593 | INFO     | sum of square deviations: 1496660620.0
[2025-10-10 13:06:48] 2025-10-10 10:55:13,594 | INFO     | sum of deviations: 23666851675.0
[2025-10-10 13:06:48] 2025-10-10 10:55:13,594 | INFO     | mean x: 1760088259.0
[2025-10-10 13:06:48] 2025-10-10 10:55:13,594 | INFO     | mean y: 2312232.171597633
[2025-10-10 13:06:48] 2025-10-10 10:55:13,594 | INFO     | -- intersect: -27830148383.156136
[2025-10-10 13:06:48] 2025-10-10 10:55:13,594 | INFO     | intersect: -27830148383.156136
[2025-10-10 13:06:48] 2025-10-10 10:55:13,595 | INFO     | chi2: 1.352425334621801
[2025-10-10 13:06:48] 2025-10-10 10:55:13,595 | INFO     | current chi2=1.352425334621801 (change=37.25179731574048 %)
[2025-10-10 13:06:48] 2025-10-10 10:55:13,595 | INFO     | sum of square deviations: 1367709365.0
[2025-10-10 13:06:48] 2025-10-10 10:55:13,596 | INFO     | sum of deviations: 22964901068.0
[2025-10-10 13:06:48] 2025-10-10 10:55:13,596 | INFO     | mean x: 1760088106.5
[2025-10-10 13:06:48] 2025-10-10 10:55:13,596 | INFO     | mean y: 2311401.7926829266
[2025-10-10 13:06:48] 2025-10-10 10:55:13,596 | INFO     | -- intersect: -29550933074.77486
[2025-10-10 13:06:48] 2025-10-10 10:55:13,597 | INFO     | intersect: -29550933074.77486
[2025-10-10 13:06:48] 2025-10-10 10:55:13,597 | INFO     | chi2: 1.3531850270573422
[2025-10-10 13:06:48] 2025-10-10 10:55:13,597 | INFO     | current chi2=1.3531850270573422 (change=-0.056172597192121365 %)
[2025-10-10 13:06:48] 2025-10-10 10:55:13,597 | INFO     | right removable region: 163
[2025-10-10 13:06:48] 2025-10-10 10:55:13,597 | INFO     | sum of square deviations: 1496660620.0
[2025-10-10 13:06:48] 2025-10-10 10:55:13,598 | INFO     | sum of deviations: -9413055729.0
[2025-10-10 13:06:48] 2025-10-10 10:55:13,598 | INFO     | mean x: 1760088564.0
[2025-10-10 13:06:48] 2025-10-10 10:55:13,598 | INFO     | mean y: 2325827.579881657
[2025-10-10 13:06:48] 2025-10-10 10:55:13,599 | INFO     | -- intersect: 11072177950.038734
[2025-10-10 13:06:48] 2025-10-10 10:55:13,599 | INFO     | intersect: 11072177950.038734
[2025-10-10 13:06:48] 2025-10-10 10:55:13,599 | INFO     | chi2: 0.8327083526835727
[2025-10-10 13:06:48] 2025-10-10 10:55:13,599 | INFO     | current chi2=0.8327083526835727 (change=61.36500023073259 %)
[2025-10-10 13:06:48] 2025-10-10 10:55:13,599 | INFO     | sum of square deviations: 1367709365.0
[2025-10-10 13:06:48] 2025-10-10 10:55:13,600 | INFO     | sum of deviations: -9281989665.0
[2025-10-10 13:06:48] 2025-10-10 10:55:13,600 | INFO     | mean x: 1760088716.5
[2025-10-10 13:06:48] 2025-10-10 10:55:13,600 | INFO     | mean y: 2325650.3902439023
[2025-10-10 13:06:48] 2025-10-10 10:55:13,601 | INFO     | -- intersect: 11947206408.03287
[2025-10-10 13:06:48] 2025-10-10 10:55:13,601 | INFO     | intersect: 11947206408.03287
[2025-10-10 13:06:48] 2025-10-10 10:55:13,601 | INFO     | chi2: 0.8304478470897976
[2025-10-10 13:06:48] 2025-10-10 10:55:13,601 | INFO     | current chi2=0.8304478470897976 (change=0.27146426314689504 %)
[2025-10-10 13:06:48] 2025-10-10 10:55:13,601 | INFO     | left removable region: 20
[2025-10-10 13:06:48] 2025-10-10 10:55:13,601 | INFO     | sum of square deviations: 906703512.0
[2025-10-10 13:06:48] 2025-10-10 10:55:13,602 | INFO     | sum of deviations: 1939343842.0
[2025-10-10 13:06:48] 2025-10-10 10:55:13,602 | INFO     | mean x: 1760088686.0
[2025-10-10 13:06:48] 2025-10-10 10:55:13,602 | INFO     | mean y: 2337287.132867133
[2025-10-10 13:06:48] 2025-10-10 10:55:13,602 | INFO     | -- intersect: -3762308056.5679426
[2025-10-10 13:06:48] 2025-10-10 10:55:13,603 | INFO     | intersect: -3762308056.5679426
[2025-10-10 13:06:48] 2025-10-10 10:55:13,603 | INFO     | chi2: 0.0006507954502197303
[2025-10-10 13:06:48] 2025-10-10 10:55:13,603 | INFO     | -- intersect: -3762308056.5679426
[2025-10-10 13:06:48] 2025-10-10 10:55:13,603 | INFO     | current memory leak: 2.14 B/s (using 143 data points, chi2=0.00)
[2025-10-10 13:06:48] 2025-10-10 10:55:13,603 | INFO     | could have reported an average CPU frequency of 2655 MHz (9 samples)
[2025-10-10 13:06:48] 2025-10-10 10:55:13,604 | INFO     | ..............................
[2025-10-10 13:06:48] 2025-10-10 10:55:13,604 | INFO     | . Timing measurements:
[2025-10-10 13:06:48] 2025-10-10 10:55:13,604 | INFO     | . get job = 0 s
[2025-10-10 13:06:48] 2025-10-10 10:55:13,604 | INFO     | . initial setup = 1 s
[2025-10-10 13:06:48] 2025-10-10 10:55:13,604 | INFO     | . payload setup = 5 s
[2025-10-10 13:06:48] 2025-10-10 10:55:13,604 | INFO     | . stage-in = 0 s
[2025-10-10 13:06:48] 2025-10-10 10:55:13,604 | INFO     | . payload execution = 10573 s
[2025-10-10 13:06:48] 2025-10-10 10:55:13,604 | INFO     | . stage-out = 0 s
[2025-10-10 13:06:48] 2025-10-10 10:55:13,604 | INFO     | . log creation = 0 s
[2025-10-10 13:06:48] 2025-10-10 10:55:13,604 | INFO     | ..............................
[2025-10-10 13:06:48] 2025-10-10 10:55:14,089 | INFO     | 
[2025-10-10 13:06:48] 2025-10-10 10:55:14,090 | INFO     | job summary report
[2025-10-10 13:06:48] 2025-10-10 10:55:14,090 | INFO     | --------------------------------------------------
[2025-10-10 13:06:48] 2025-10-10 10:55:14,090 | INFO     | PanDA job id: 6837377883
[2025-10-10 13:06:48] 2025-10-10 10:55:14,090 | INFO     | task id: 46676269
[2025-10-10 13:06:48] 2025-10-10 10:55:14,090 | INFO     | errors: (none)
[2025-10-10 13:06:48] 2025-10-10 10:55:14,090 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 13:06:48] 2025-10-10 10:55:14,090 | INFO     | pilot state: finished 
[2025-10-10 13:06:48] 2025-10-10 10:55:14,090 | INFO     | transexitcode: 0
[2025-10-10 13:06:48] 2025-10-10 10:55:14,090 | INFO     | exeerrorcode: 0
[2025-10-10 13:06:48] 2025-10-10 10:55:14,090 | INFO     | exeerrordiag: 
[2025-10-10 13:06:48] 2025-10-10 10:55:14,090 | INFO     | exitcode: 0
[2025-10-10 13:06:48] 2025-10-10 10:55:14,090 | INFO     | exitmsg: OK
[2025-10-10 13:06:48] 2025-10-10 10:55:14,091 | INFO     | cpuconsumptiontime: 40725 s
[2025-10-10 13:06:48] 2025-10-10 10:55:14,091 | INFO     | nevents: 400
[2025-10-10 13:06:48] 2025-10-10 10:55:14,091 | INFO     | neventsw: 0
[2025-10-10 13:06:48] 2025-10-10 10:55:14,091 | INFO     | pid: 2637581
[2025-10-10 13:06:48] 2025-10-10 10:55:14,091 | INFO     | pgrp: 2637581
[2025-10-10 13:06:48] 2025-10-10 10:55:14,091 | INFO     | corecount: 4
[2025-10-10 13:06:48] 2025-10-10 10:55:14,091 | INFO     | event service: False
[2025-10-10 13:06:48] 2025-10-10 10:55:14,091 | INFO     | sizes: {0: 2348866, 5: 2349128, 11: 2349184, 10583: 2378045, 10584: 2387065, 10586: 2387121, 10590: 2387507}
[2025-10-10 13:06:48] 2025-10-10 10:55:14,091 | INFO     | --------------------------------------------------
[2025-10-10 13:06:48] 2025-10-10 10:55:14,091 | INFO     | 
[2025-10-10 13:06:48] 2025-10-10 10:55:14,091 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-10-10 13:06:48] 2025-10-10 10:55:14,106 | INFO     | time since job start (10606s) is within the limit (172800.0s)
[2025-10-10 13:06:48] 2025-10-10 10:55:14,113 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 13:06:48] 2025-10-10 10:55:14,113 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 13:06:48] 2025-10-10 10:55:14,113 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 13:06:48] 2025-10-10 10:55:14,114 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 13:06:48] 2025-10-10 10:55:14,114 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 13:06:48] 2025-10-10 10:55:14,114 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 13:06:48] 2025-10-10 10:55:14,114 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 13:06:48] 2025-10-10 10:55:14,114 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 13:06:48] 2025-10-10 10:55:14,114 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 13:06:48] 2025-10-10 10:55:14,114 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 13:06:48] 2025-10-10 10:55:14,114 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 13:06:48] 2025-10-10 10:55:14,114 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 13:06:48] 2025-10-10 10:55:14,114 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 13:06:48] 2025-10-10 10:55:14,114 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 13:06:48] 2025-10-10 10:55:14,114 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 13:06:48] 2025-10-10 10:55:14,114 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 13:06:48] 2025-10-10 10:55:14,115 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 13:06:48] 2025-10-10 10:55:14,115 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 13:06:48] 2025-10-10 10:55:14,115 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 13:06:48] 2025-10-10 10:55:14,115 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 13:06:48] 2025-10-10 10:55:14,115 | INFO     | job 6837377883 has completed (purged errors)
[2025-10-10 13:06:48] 2025-10-10 10:55:14,115 | INFO     | overall cleanup function is called
[2025-10-10 13:06:48] 2025-10-10 10:55:15,122 | INFO     | --- collectZombieJob: --- 10, [2637581]
[2025-10-10 13:06:48] 2025-10-10 10:55:15,123 | INFO     | zombie collector waiting for pid 2637581
[2025-10-10 13:06:48] 2025-10-10 10:55:15,123 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 13:06:48] 2025-10-10 10:55:15,123 | INFO     | collected zombie processes
[2025-10-10 13:06:48] 2025-10-10 10:55:15,123 | INFO     | will attempt to kill all subprocesses of pid=2637581
[2025-10-10 13:06:48] 2025-10-10 10:55:15,485 | INFO     | process IDs to be killed: [2637581] (in reverse order)
[2025-10-10 13:06:48] 2025-10-10 10:55:15,601 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 13:06:48] 2025-10-10 10:55:15,601 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 13:06:48] 2025-10-10 10:55:15,614 | INFO     | did not find any defunct processes belonging to 2637581
[2025-10-10 13:06:48] 2025-10-10 10:55:15,626 | INFO     | did not find any defunct processes belonging to 2637581
[2025-10-10 13:06:48] 2025-10-10 10:55:15,627 | INFO     | ready for new job
[2025-10-10 13:06:48] 2025-10-10 10:55:15,627 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 13:06:48] 2025-10-10 10:55:15,629 | INFO     | ***************************************
[2025-10-10 13:06:48] 2025-10-10 10:55:15,629 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 13:06:48] 2025-10-10 10:55:15,629 | INFO     | ***************************************
[2025-10-10 13:06:48] 2025-10-10 10:55:15,629 | INFO     | 
[2025-10-10 13:06:48] 2025-10-10 10:55:15,633 | INFO     | architecture information:
[2025-10-10 13:06:48] 2025-10-10 10:55:15,633 | INFO     | executing command: cat /etc/os-release
[2025-10-10 13:06:48] 2025-10-10 10:55:15,650 | INFO     | cat /etc/os-release:
[2025-10-10 13:06:48] NAME="CentOS Linux"
[2025-10-10 13:06:48] VERSION="7 (Core)"
[2025-10-10 13:06:48] ID="centos"
[2025-10-10 13:06:48] ID_LIKE="rhel fedora"
[2025-10-10 13:06:48] VERSION_ID="7"
[2025-10-10 13:06:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 13:06:48] ANSI_COLOR="0;31"
[2025-10-10 13:06:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 13:06:48] HOME_URL="https://www.centos.org/"
[2025-10-10 13:06:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 13:06:48] 
[2025-10-10 13:06:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 13:06:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 13:06:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 13:06:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 13:06:48] 
[2025-10-10 13:06:48] 2025-10-10 10:55:15,650 | INFO     | ***************************************
[2025-10-10 13:06:48] 2025-10-10 10:55:16,153 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-10-10 13:06:48] 2025-10-10 10:55:16,170 | INFO     | sufficient remaining disk space (693528166400 B)
[2025-10-10 13:06:48] 2025-10-10 10:55:16,170 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 13:06:48] 2025-10-10 10:55:16,171 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 13:06:48] 2025-10-10 10:55:16,171 | INFO     | update_server=False
[2025-10-10 13:06:48] 2025-10-10 10:55:16,171 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 13:06:48] 2025-10-10 10:55:16,171 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 13:06:48] 2025-10-10 10:55:16,171 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 13:06:48] 2025-10-10 10:55:16,242 | INFO     | all job control threads have been joined
[2025-10-10 13:06:48] 2025-10-10 10:55:16,789 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 13:06:48] 2025-10-10 10:55:16,790 | INFO     | aborting loop
[2025-10-10 13:06:48] 2025-10-10 10:55:16,854 | INFO     | all payload control threads have been joined
[2025-10-10 13:06:48] 2025-10-10 10:55:16,862 | INFO     | all data control threads have been joined
[2025-10-10 13:06:48] 2025-10-10 10:55:17,176 | INFO     | [job] retrieve thread has finished
[2025-10-10 13:06:48] 2025-10-10 10:55:17,248 | INFO     | [job] control thread has finished
[2025-10-10 13:06:48] 2025-10-10 10:55:17,795 | INFO     | [job] job monitor thread has finished
[2025-10-10 13:06:48] 2025-10-10 10:55:17,859 | INFO     | [payload] control thread has finished
[2025-10-10 13:06:48] 2025-10-10 10:55:17,867 | INFO     | [data] control thread has finished
[2025-10-10 13:06:48] 2025-10-10 10:55:17,943 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 13:06:48] 2025-10-10 10:55:17,944 | INFO     | [job] validate thread has finished
[2025-10-10 13:06:48] 2025-10-10 10:55:18,111 | INFO     | [payload] failed_post thread has finished
[2025-10-10 13:06:48] 2025-10-10 10:55:18,177 | INFO     | [data] copytool_out thread has finished
[2025-10-10 13:06:48] 2025-10-10 10:55:18,432 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 13:06:48] 2025-10-10 10:55:18,548 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 13:06:48] 2025-10-10 10:55:18,604 | INFO     | [data] copytool_in thread has finished
[2025-10-10 13:06:48] 2025-10-10 10:55:18,708 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 13:06:48] 2025-10-10 10:55:18,747 | INFO     | [payload] validate_post thread has finished
[2025-10-10 13:06:48] 2025-10-10 10:55:19,713 | INFO     | [job] queue monitor thread has finished
[2025-10-10 13:06:48] 2025-10-10 10:55:20,177 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 13:06:48] 2025-10-10 10:55:26,422 | INFO     | job.realtimelogging is not enabled
[2025-10-10 13:06:48] 2025-10-10 10:55:27,427 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 13:06:48] 2025-10-10 10:55:45,155 | INFO     | [monitor] cgroup control has ended
[2025-10-10 13:06:48] 2025-10-10 10:55:46,169 | INFO     | 10609s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-10 13:06:48] 2025-10-10 10:55:47,082 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23347051984704)>', '<ExcThread(monitor, started 23346813040384)>']
[2025-10-10 13:06:48] 2025-10-10 10:55:47,654 | INFO     | PID=2630705 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 13:06:48] 2025-10-10 10:55:47,654 | INFO     | .. there are 6 such processes running
[2025-10-10 13:06:48] 2025-10-10 10:55:47,656 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 13:06:48] 2025-10-10 10:55:47,656 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 13:06:48] 2025-10-10 10:55:47,656 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 13:06:48] 2025-10-10 10:55:47,656 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 13:06:48] 2025-10-10 10:55:47,656 | INFO     | [monitor] control thread has ended
[2025-10-10 13:06:48] 2025-10-10 10:55:52,106 | INFO     | all workflow threads have been joined
[2025-10-10 13:06:48] 2025-10-10 10:55:52,107 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 13:06:48] 2025-10-10 10:55:52,107 | INFO     | traces error code: 0
[2025-10-10 13:06:48] 2025-10-10 10:55:52,107 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 13:06:48] 2025-10-10 10:55:52,277 [wrapper] ==== pilot stdout END ====
[2025-10-10 13:06:48] 2025-10-10 10:55:52,280 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 13:06:48] 2025-10-10 10:55:52,282 [wrapper] pilotpid: 2630705
[2025-10-10 13:06:48] 2025-10-10 10:55:52,285 [wrapper] Pilot exit status: 0
[2025-10-10 13:06:48] 2025-10-10 10:55:52,295 [wrapper] pandaids: 6837377883
[2025-10-10 13:06:48] 2025-10-10 10:55:52,368 [wrapper] cleanup supervisor_pilot 2912589 2630706
[2025-10-10 13:06:48] 2025-10-10 10:55:52,370 [wrapper] Test setup, not cleaning
[2025-10-10 13:06:48] 2025-10-10 10:55:52,373 [wrapper] apfmon messages muted
[2025-10-10 13:06:48] 2025-10-10 10:55:52,376 [wrapper] ==== wrapper stdout END ====
[2025-10-10 13:06:48] 2025-10-10 10:55:52,379 [wrapper] ==== wrapper stderr END ====
[2025-10-10 13:06:48]  *** Error codes and diagnostics ***
[2025-10-10 13:06:48]     "exeErrorCode": 0,
[2025-10-10 13:06:48]     "exeErrorDiag": "",
[2025-10-10 13:06:48]     "pilotErrorCode": 0,
[2025-10-10 13:06:48]     "pilotErrorDiag": "",
[2025-10-10 13:06:48]  *** Listing of results directory ***
[2025-10-10 13:06:48] total 405880
[2025-10-10 13:06:48] -rw-r--r-- 1 boinc boinc    557409 Oct 10 03:07 pilot3.tar.gz
[2025-10-10 13:06:48] -rwx------ 1 boinc boinc     36292 Oct 10 03:10 runpilot2-wrapper.sh
[2025-10-10 13:06:48] -rw-r--r-- 1 boinc boinc      5112 Oct 10 03:10 queuedata.json
[2025-10-10 13:06:48] -rw-r--r-- 1 boinc boinc       100 Oct 10 09:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 13:06:48] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 09:23 run_atlas
[2025-10-10 13:06:48] -rw-r--r-- 1 boinc boinc       105 Oct 10 09:23 job.xml
[2025-10-10 13:06:48] -rw-r--r-- 2 boinc boinc 220482816 Oct 10 09:58 EVNT.46676267._001206.pool.root.1
[2025-10-10 13:06:48] -rw-r--r-- 1 boinc boinc      6634 Oct 10 09:58 init_data.xml
[2025-10-10 13:06:48] -rw-r--r-- 2 boinc boinc     15120 Oct 10 09:58 start_atlas.sh
[2025-10-10 13:06:48] drwxrwx--x 2 boinc boinc      4096 Oct 10 09:58 shared
[2025-10-10 13:06:48] -rw-r--r-- 2 boinc boinc    569675 Oct 10 09:58 input.tar.gz
[2025-10-10 13:06:48] -rw-r--r-- 1 boinc boinc         0 Oct 10 09:58 boinc_lockfile
[2025-10-10 13:06:48] -rw-r--r-- 1 boinc boinc      2549 Oct 10 09:58 pandaJob.out
[2025-10-10 13:06:48] -rw------- 1 boinc boinc    975454 Oct 10 09:58 agis_schedconf.cvmfs.json
[2025-10-10 13:06:48] -rw------- 1 boinc boinc   1560580 Oct 10 09:58 agis_ddmendpoints.agis.ALL.json
[2025-10-10 13:06:48] drwx------ 5 boinc boinc      4096 Oct 10 09:58 pilot3
[2025-10-10 13:06:48] -rw------- 1 boinc boinc 187523243 Oct 10 12:54 HITS.46676269._029542.pool.root.1
[2025-10-10 13:06:48] -rw-r--r-- 1 boinc boinc       528 Oct 10 12:54 boinc_task_state.xml
[2025-10-10 13:06:48] -rw------- 1 boinc boinc      1033 Oct 10 12:55 memory_monitor_summary.json
[2025-10-10 13:06:48] -rw------- 1 boinc boinc    342842 Oct 10 12:55 log.46676269._029542.job.log.tgz.1
[2025-10-10 13:06:48] -rw------- 1 boinc boinc      7826 Oct 10 12:55 heartbeat.json
[2025-10-10 13:06:48] -rw------- 1 boinc boinc        95 Oct 10 12:55 pilot_heartbeat.json
[2025-10-10 13:06:48] -rw------- 1 boinc boinc      5021 Oct 10 12:55 pilotlog.txt
[2025-10-10 13:06:48] -rw------- 1 boinc boinc   1511422 Oct 10 12:55 log.46676269._029542.job.log.1
[2025-10-10 13:06:48] -rw------- 1 boinc boinc       357 Oct 10 12:55 output.list
[2025-10-10 13:06:48] -rw-r--r-- 1 boinc boinc       620 Oct 10 12:55 runtime_log
[2025-10-10 13:06:48] -rw------- 1 boinc boinc   1873920 Oct 10 12:55 result.tar.gz
[2025-10-10 13:06:48] -rw-r--r-- 1 boinc boinc      9070 Oct 10 12:55 runtime_log.err
[2025-10-10 13:06:48] -rw------- 1 boinc boinc       665 Oct 10 12:55 FMLODmkpGR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmusbNDmGUHiCo.diag
[2025-10-10 13:06:48] -rw-r--r-- 1 boinc boinc        26 Oct 10 13:06 wrapper_checkpoint.txt
[2025-10-10 13:06:48] -rw-r--r-- 1 boinc boinc      8192 Oct 10 13:06 boinc_mmap_file
[2025-10-10 13:06:48] -rw-r--r-- 1 boinc boinc     20711 Oct 10 13:06 stderr.txt
[2025-10-10 13:06:48] HITS file was successfully produced:
[2025-10-10 13:06:48] -rw------- 1 boinc boinc 187523243 Oct 10 12:54 shared/HITS.pool.root.1
[2025-10-10 13:06:48]  *** Contents of shared directory: ***
[2025-10-10 13:06:48] total 400864
[2025-10-10 13:06:48] -rw-r--r-- 2 boinc boinc 220482816 Oct 10 09:58 ATLAS.root_0
[2025-10-10 13:06:48] -rw-r--r-- 2 boinc boinc     15120 Oct 10 09:58 start_atlas.sh
[2025-10-10 13:06:48] -rw-r--r-- 2 boinc boinc    569675 Oct 10 09:58 input.tar.gz
[2025-10-10 13:06:48] -rw------- 1 boinc boinc 187523243 Oct 10 12:54 HITS.pool.root.1
[2025-10-10 13:06:48] -rw------- 1 boinc boinc   1873920 Oct 10 12:55 result.tar.gz
13:06:50 (2626645): run_atlas exited; CPU time 41161.903429
13:06:50 (2626645): called boinc_finish(0)

</stderr_txt>
]]>

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