Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:38:52 (945221): wrapper (7.7.26015): starting
02:38:52 (945221): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 02:38:52] Arguments: --nthreads 8
[2025-10-10 02:38:52] Threads: 8
[2025-10-10 02:38:52] Checking for CVMFS
[2025-10-10 02:38:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 02:38:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 02:38:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 02:38:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 02:38:54] 2.12.6.0 3376676 81689 287604 151537 0 387 12607463 18491393 23906 16776704 0 88374909 99.387 139164780 32062 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 02:38:54] CVMFS is ok
[2025-10-10 02:38:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 02:38:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 02:38:54] Further information can be found at the LHC@home message board.
[2025-10-10 02:38:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 02:38:54] Checking for apptainer binary...
[2025-10-10 02:38:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 02:38:54] Running /usr/bin/apptainer --version
[2025-10-10 02:38:54] apptainer version 1.4.1-1.el9
[2025-10-10 02:39:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 02:39:15] c-8-38.aglt2.org
[2025-10-10 02:39:15] apptainer works
[2025-10-10 02:39:15] Set ATHENA_PROC_NUMBER=8
[2025-10-10 02:39:15] Set ATHENA_CORE_NUMBER=8
[2025-10-10 02:39:15] Starting ATLAS job with PandaID=6837364114
[2025-10-10 02:39:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 05:41:33]  *** The last 200 lines of the pilot log: ***
[2025-10-10 05:41:33] 2025-10-10 09:40:48,199 | INFO     | time since job start (10839s) is within the limit (172800.0s)
[2025-10-10 05:41:33] 2025-10-10 09:40:50,150 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 05:41:33] 2025-10-10 09:40:50,166 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.149050000001
[2025-10-10 05:41:33] 2025-10-10 09:40:50,180 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6837364114/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 05:41:33] 2025-10-10 09:40:50,181 | INFO     | extracted standard info from prmon json
[2025-10-10 05:41:33] 2025-10-10 09:40:50,181 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 05:41:33] 2025-10-10 09:40:50,182 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 05:41:33] 2025-10-10 09:40:50,182 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 05:41:33] 2025-10-10 09:40:50,182 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 05:41:33] 2025-10-10 09:40:50,188 | INFO     | fitting pss+swap vs Time
[2025-10-10 05:41:33] 2025-10-10 09:40:50,189 | INFO     | sum of square deviations: 1690429026.7215872
[2025-10-10 05:41:33] 2025-10-10 09:40:50,194 | INFO     | sum of deviations: -3797705228.840906
[2025-10-10 05:41:33] 2025-10-10 09:40:50,194 | INFO     | mean x: 1760083870.5852273
[2025-10-10 05:41:33] 2025-10-10 09:40:50,195 | INFO     | mean y: 2182178.522727273
[2025-10-10 05:41:33] 2025-10-10 09:40:50,195 | INFO     | -- intersect: 3956373459.4684467
[2025-10-10 05:41:33] 2025-10-10 09:40:50,195 | INFO     | intersect: 3956373459.4684467
[2025-10-10 05:41:33] 2025-10-10 09:40:50,195 | INFO     | chi2: 3.1498065151704444
[2025-10-10 05:41:33] 2025-10-10 09:40:50,196 | INFO     | sum of square deviations: 1550412371.6842053
[2025-10-10 05:41:33] 2025-10-10 09:40:50,197 | INFO     | sum of deviations: 7133737100.5263
[2025-10-10 05:41:33] 2025-10-10 09:40:50,197 | INFO     | mean x: 1760083718.0877192
[2025-10-10 05:41:33] 2025-10-10 09:40:50,197 | INFO     | mean y: 2193822.964912281
[2025-10-10 05:41:33] 2025-10-10 09:40:50,197 | INFO     | -- intersect: -8096280330.795319
[2025-10-10 05:41:33] 2025-10-10 09:40:50,197 | INFO     | intersect: -8096280330.795319
[2025-10-10 05:41:33] 2025-10-10 09:40:50,202 | INFO     | chi2: 2.391028453229709
[2025-10-10 05:41:33] 2025-10-10 09:40:50,202 | INFO     | current chi2=2.391028453229709 (change=24.08967212069139 %)
[2025-10-10 05:41:33] 2025-10-10 09:40:50,202 | INFO     | right removable region: 170
[2025-10-10 05:41:33] 2025-10-10 09:40:50,202 | INFO     | sum of square deviations: 1550403221.6842053
[2025-10-10 05:41:33] 2025-10-10 09:40:50,203 | INFO     | sum of deviations: -35038126361.824554
[2025-10-10 05:41:33] 2025-10-10 09:40:50,204 | INFO     | mean x: 1760084023.0877192
[2025-10-10 05:41:33] 2025-10-10 09:40:50,204 | INFO     | mean y: 2215933.321637427
[2025-10-10 05:41:33] 2025-10-10 09:40:50,204 | INFO     | -- intersect: 39778994996.88923
[2025-10-10 05:41:33] 2025-10-10 09:40:50,204 | INFO     | intersect: 39778994996.88923
[2025-10-10 05:41:33] 2025-10-10 09:40:50,204 | INFO     | chi2: 1.1927370019132932
[2025-10-10 05:41:33] 2025-10-10 09:40:50,204 | INFO     | current chi2=1.1927370019132932 (change=62.13300733969842 %)
[2025-10-10 05:41:33] 2025-10-10 09:40:50,205 | INFO     | sum of square deviations: 1418331054.1445713
[2025-10-10 05:41:33] 2025-10-10 09:40:50,210 | INFO     | sum of deviations: -36733598721.33736
[2025-10-10 05:41:33] 2025-10-10 09:40:50,210 | INFO     | mean x: 1760084175.5903614
[2025-10-10 05:41:33] 2025-10-10 09:40:50,210 | INFO     | mean y: 2217768.7891566264
[2025-10-10 05:41:33] 2025-10-10 09:40:50,210 | INFO     | -- intersect: 45586939074.145256
[2025-10-10 05:41:33] 2025-10-10 09:40:50,211 | INFO     | intersect: 45586939074.145256
[2025-10-10 05:41:33] 2025-10-10 09:40:50,211 | INFO     | chi2: 1.108197840991298
[2025-10-10 05:41:33] 2025-10-10 09:40:50,211 | INFO     | current chi2=1.108197840991298 (change=7.0878291514713005 %)
[2025-10-10 05:41:33] 2025-10-10 09:40:50,211 | INFO     | left removable region: 20
[2025-10-10 05:41:33] 2025-10-10 09:40:50,212 | INFO     | sum of square deviations: 1046450654.0000013
[2025-10-10 05:41:33] 2025-10-10 09:40:50,212 | INFO     | sum of deviations: -13293719546.399994
[2025-10-10 05:41:33] 2025-10-10 09:40:50,213 | INFO     | mean x: 1760084297.6
[2025-10-10 05:41:33] 2025-10-10 09:40:50,213 | INFO     | mean y: 2215654.76
[2025-10-10 05:41:33] 2025-10-10 09:40:50,213 | INFO     | -- intersect: 22361671345.173084
[2025-10-10 05:41:33] 2025-10-10 09:40:50,213 | INFO     | intersect: 22361671345.173084
[2025-10-10 05:41:33] 2025-10-10 09:40:50,217 | INFO     | chi2: 0.253380588868579
[2025-10-10 05:41:33] 2025-10-10 09:40:50,218 | INFO     | -- intersect: 22361671345.173084
[2025-10-10 05:41:33] 2025-10-10 09:40:50,218 | INFO     | current memory leak: -12.70 B/s (using 150 data points, chi2=0.25)
[2025-10-10 05:41:33] 2025-10-10 09:40:50,218 | INFO     | could have reported an average CPU frequency of 2600 MHz (9 samples)
[2025-10-10 05:41:33] 2025-10-10 09:40:50,219 | INFO     | ..............................
[2025-10-10 05:41:33] 2025-10-10 09:40:50,219 | INFO     | . Timing measurements:
[2025-10-10 05:41:33] 2025-10-10 09:40:50,219 | INFO     | . get job = 0 s
[2025-10-10 05:41:33] 2025-10-10 09:40:50,219 | INFO     | . initial setup = 4 s
[2025-10-10 05:41:33] 2025-10-10 09:40:50,219 | INFO     | . payload setup = 35 s
[2025-10-10 05:41:33] 2025-10-10 09:40:50,219 | INFO     | . stage-in = 0 s
[2025-10-10 05:41:33] 2025-10-10 09:40:50,219 | INFO     | . payload execution = 10711 s
[2025-10-10 05:41:33] 2025-10-10 09:40:50,219 | INFO     | . stage-out = 2 s
[2025-10-10 05:41:33] 2025-10-10 09:40:50,219 | INFO     | . log creation = 0 s
[2025-10-10 05:41:33] 2025-10-10 09:40:50,220 | INFO     | ..............................
[2025-10-10 05:41:33] 2025-10-10 09:40:50,659 | INFO     | 
[2025-10-10 05:41:33] 2025-10-10 09:40:50,660 | INFO     | job summary report
[2025-10-10 05:41:33] 2025-10-10 09:40:50,660 | INFO     | --------------------------------------------------
[2025-10-10 05:41:33] 2025-10-10 09:40:50,660 | INFO     | PanDA job id: 6837364114
[2025-10-10 05:41:33] 2025-10-10 09:40:50,660 | INFO     | task id: 46676269
[2025-10-10 05:41:33] 2025-10-10 09:40:50,660 | INFO     | errors: (none)
[2025-10-10 05:41:33] 2025-10-10 09:40:50,660 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 05:41:33] 2025-10-10 09:40:50,660 | INFO     | pilot state: finished 
[2025-10-10 05:41:33] 2025-10-10 09:40:50,660 | INFO     | transexitcode: 0
[2025-10-10 05:41:33] 2025-10-10 09:40:50,661 | INFO     | exeerrorcode: 0
[2025-10-10 05:41:33] 2025-10-10 09:40:50,661 | INFO     | exeerrordiag: 
[2025-10-10 05:41:33] 2025-10-10 09:40:50,661 | INFO     | exitcode: 0
[2025-10-10 05:41:33] 2025-10-10 09:40:50,661 | INFO     | exitmsg: OK
[2025-10-10 05:41:33] 2025-10-10 09:40:50,661 | INFO     | cpuconsumptiontime: 48670 s
[2025-10-10 05:41:33] 2025-10-10 09:40:50,661 | INFO     | nevents: 400
[2025-10-10 05:41:33] 2025-10-10 09:40:50,661 | INFO     | neventsw: 0
[2025-10-10 05:41:33] 2025-10-10 09:40:50,661 | INFO     | pid: 958233
[2025-10-10 05:41:33] 2025-10-10 09:40:50,661 | INFO     | pgrp: 958233
[2025-10-10 05:41:33] 2025-10-10 09:40:50,662 | INFO     | corecount: 8
[2025-10-10 05:41:33] 2025-10-10 09:40:50,662 | INFO     | event service: False
[2025-10-10 05:41:33] 2025-10-10 09:40:50,662 | INFO     | sizes: {0: 2348630, 1: 2348885, 2: 2348885, 12: 2348913, 23: 2348941, 28: 2349231, 34: 2349387, 10751: 2378621, 10752: 2378620, 10755: 2387674, 10757: 2387730, 107
[2025-10-10 05:41:33] 2025-10-10 09:40:50,662 | INFO     | --------------------------------------------------
[2025-10-10 05:41:33] 2025-10-10 09:40:50,662 | INFO     | 
[2025-10-10 05:41:33] 2025-10-10 09:40:50,662 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-10 05:41:33] 2025-10-10 09:40:50,733 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 05:41:33] 2025-10-10 09:40:50,733 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 05:41:33] 2025-10-10 09:40:50,733 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 05:41:33] 2025-10-10 09:40:50,733 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 05:41:33] 2025-10-10 09:40:50,733 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 05:41:33] 2025-10-10 09:40:50,733 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 05:41:33] 2025-10-10 09:40:50,734 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 05:41:33] 2025-10-10 09:40:50,734 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 05:41:33] 2025-10-10 09:40:50,734 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 05:41:33] 2025-10-10 09:40:50,734 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 05:41:33] 2025-10-10 09:40:50,734 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 05:41:33] 2025-10-10 09:40:50,734 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 05:41:33] 2025-10-10 09:40:50,734 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 05:41:33] 2025-10-10 09:40:50,734 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 05:41:33] 2025-10-10 09:40:50,735 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 05:41:33] 2025-10-10 09:40:50,735 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 05:41:33] 2025-10-10 09:40:50,735 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 05:41:33] 2025-10-10 09:40:50,735 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 05:41:33] 2025-10-10 09:40:50,735 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 05:41:33] 2025-10-10 09:40:50,750 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 05:41:33] 2025-10-10 09:40:50,750 | INFO     | job 6837364114 has completed (purged errors)
[2025-10-10 05:41:33] 2025-10-10 09:40:50,750 | INFO     | overall cleanup function is called
[2025-10-10 05:41:33] 2025-10-10 09:40:50,782 | INFO     | PID=949577 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 05:41:33] 2025-10-10 09:40:50,782 | INFO     | .. there are 39 such processes running
[2025-10-10 05:41:33] 2025-10-10 09:40:51,759 | INFO     | --- collectZombieJob: --- 10, [958233]
[2025-10-10 05:41:33] 2025-10-10 09:40:51,760 | INFO     | zombie collector waiting for pid 958233
[2025-10-10 05:41:33] 2025-10-10 09:40:51,760 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 05:41:33] 2025-10-10 09:40:51,760 | INFO     | collected zombie processes
[2025-10-10 05:41:33] 2025-10-10 09:40:51,760 | INFO     | will attempt to kill all subprocesses of pid=958233
[2025-10-10 05:41:33] 2025-10-10 09:40:52,440 | INFO     | process IDs to be killed: [958233] (in reverse order)
[2025-10-10 05:41:33] 2025-10-10 09:40:52,654 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 05:41:33] 2025-10-10 09:40:52,654 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 05:41:33] 2025-10-10 09:40:52,673 | INFO     | did not find any defunct processes belonging to 958233
[2025-10-10 05:41:33] 2025-10-10 09:40:52,688 | INFO     | did not find any defunct processes belonging to 958233
[2025-10-10 05:41:33] 2025-10-10 09:40:52,689 | INFO     | ready for new job
[2025-10-10 05:41:33] 2025-10-10 09:40:52,689 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 05:41:33] 2025-10-10 09:40:52,690 | INFO     | ***************************************
[2025-10-10 05:41:33] 2025-10-10 09:40:52,691 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 05:41:33] 2025-10-10 09:40:52,691 | INFO     | ***************************************
[2025-10-10 05:41:33] 2025-10-10 09:40:52,691 | INFO     | 
[2025-10-10 05:41:33] 2025-10-10 09:40:52,706 | INFO     | architecture information:
[2025-10-10 05:41:33] 2025-10-10 09:40:52,709 | INFO     | executing command: cat /etc/os-release
[2025-10-10 05:41:33] 2025-10-10 09:40:52,741 | INFO     | cat /etc/os-release:
[2025-10-10 05:41:33] NAME="CentOS Linux"
[2025-10-10 05:41:33] VERSION="7 (Core)"
[2025-10-10 05:41:33] ID="centos"
[2025-10-10 05:41:33] ID_LIKE="rhel fedora"
[2025-10-10 05:41:33] VERSION_ID="7"
[2025-10-10 05:41:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 05:41:33] ANSI_COLOR="0;31"
[2025-10-10 05:41:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 05:41:33] HOME_URL="https://www.centos.org/"
[2025-10-10 05:41:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 05:41:33] 
[2025-10-10 05:41:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 05:41:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 05:41:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 05:41:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 05:41:33] 
[2025-10-10 05:41:33] 2025-10-10 09:40:52,741 | INFO     | ***************************************
[2025-10-10 05:41:33] 2025-10-10 09:40:53,245 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-10 05:41:33] 2025-10-10 09:40:53,309 | INFO     | sufficient remaining disk space (95426707456 B)
[2025-10-10 05:41:33] 2025-10-10 09:40:53,309 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 05:41:33] 2025-10-10 09:40:53,309 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 05:41:33] 2025-10-10 09:40:53,309 | INFO     | update_server=False
[2025-10-10 05:41:33] 2025-10-10 09:40:53,310 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 05:41:33] 2025-10-10 09:40:53,421 | INFO     | all job control threads have been joined
[2025-10-10 05:41:33] 2025-10-10 09:40:54,020 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 05:41:33] 2025-10-10 09:40:54,021 | INFO     | aborting loop
[2025-10-10 05:41:33] 2025-10-10 09:40:54,132 | INFO     | all data control threads have been joined
[2025-10-10 05:41:33] 2025-10-10 09:40:54,316 | INFO     | [job] retrieve thread has finished
[2025-10-10 05:41:33] 2025-10-10 09:40:54,336 | INFO     | all payload control threads have been joined
[2025-10-10 05:41:33] 2025-10-10 09:40:54,427 | INFO     | [job] control thread has finished
[2025-10-10 05:41:33] 2025-10-10 09:40:54,693 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 05:41:33] 2025-10-10 09:40:54,741 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 05:41:33] 2025-10-10 09:40:54,800 | INFO     | [job] validate thread has finished
[2025-10-10 05:41:33] 2025-10-10 09:40:54,803 | INFO     | [data] copytool_in thread has finished
[2025-10-10 05:41:33] 2025-10-10 09:40:54,931 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 05:41:33] 2025-10-10 09:40:54,961 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 05:41:33] 2025-10-10 09:40:55,026 | INFO     | [job] job monitor thread has finished
[2025-10-10 05:41:33] 2025-10-10 09:40:55,138 | INFO     | [data] control thread has finished
[2025-10-10 05:41:33] 2025-10-10 09:40:55,341 | INFO     | [payload] control thread has finished
[2025-10-10 05:41:33] 2025-10-10 09:40:55,560 | INFO     | [payload] validate_post thread has finished
[2025-10-10 05:41:33] 2025-10-10 09:40:55,570 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 05:41:33] 2025-10-10 09:40:55,663 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 05:41:33] 2025-10-10 09:40:55,797 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 05:41:33] 2025-10-10 09:40:55,853 | INFO     | [payload] failed_post thread has finished
[2025-10-10 05:41:33] 2025-10-10 09:40:56,670 | INFO     | [job] queue monitor thread has finished
[2025-10-10 05:41:33] 2025-10-10 09:40:56,700 | INFO     | [data] copytool_out thread has finished
[2025-10-10 05:41:33] 2025-10-10 09:40:58,766 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 05:41:33] 2025-10-10 09:41:23,485 | INFO     | PID=949577 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 05:41:33] 2025-10-10 09:41:23,486 | INFO     | .. there are 39 such processes running
[2025-10-10 05:41:33] 2025-10-10 09:41:23,486 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 05:41:33] 2025-10-10 09:41:23,486 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 05:41:33] 2025-10-10 09:41:23,486 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 05:41:33] 2025-10-10 09:41:26,840 | INFO     | [monitor] cgroup control has ended
[2025-10-10 05:41:33] 2025-10-10 09:41:27,666 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140711643555648)>', '<ExcThread(monitor, started 140711131322112)>']
[2025-10-10 05:41:33] 2025-10-10 09:41:28,518 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 05:41:33] 2025-10-10 09:41:28,519 | INFO     | [monitor] control thread has ended
[2025-10-10 05:41:33] 2025-10-10 09:41:32,692 | INFO     | all workflow threads have been joined
[2025-10-10 05:41:33] 2025-10-10 09:41:32,693 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 05:41:33] 2025-10-10 09:41:32,693 | INFO     | traces error code: 0
[2025-10-10 05:41:33] 2025-10-10 09:41:32,693 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 05:41:33] 2025-10-10 09:41:32,863 [wrapper] ==== pilot stdout END ====
[2025-10-10 05:41:33] 2025-10-10 09:41:32,879 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 05:41:33] 2025-10-10 09:41:32,894 [wrapper] pilotpid: 949577
[2025-10-10 05:41:33] 2025-10-10 09:41:32,908 [wrapper] Pilot exit status: 0
[2025-10-10 05:41:33] 2025-10-10 09:41:32,958 [wrapper] pandaids: 6837364114
[2025-10-10 05:41:33] 2025-10-10 09:41:33,178 [wrapper] cleanup supervisor_pilot 1604527 949578
[2025-10-10 05:41:33] 2025-10-10 09:41:33,204 [wrapper] Test setup, not cleaning
[2025-10-10 05:41:33] 2025-10-10 09:41:33,228 [wrapper] apfmon messages muted
[2025-10-10 05:41:33] 2025-10-10 09:41:33,247 [wrapper] ==== wrapper stdout END ====
[2025-10-10 05:41:33] 2025-10-10 09:41:33,265 [wrapper] ==== wrapper stderr END ====
[2025-10-10 05:41:33]  *** Error codes and diagnostics ***
[2025-10-10 05:41:33]     "exeErrorCode": 0,
[2025-10-10 05:41:33]     "exeErrorDiag": "",
[2025-10-10 05:41:33]     "pilotErrorCode": 0,
[2025-10-10 05:41:33]     "pilotErrorDiag": "",
[2025-10-10 05:41:33]  *** Listing of results directory ***
[2025-10-10 05:41:33] total 412452
[2025-10-10 05:41:33] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 17:11 pilot3.tar.gz
[2025-10-10 05:41:33] -rwx------. 1 boincer umatlas     36292 Oct  9 17:33 runpilot2-wrapper.sh
[2025-10-10 05:41:33] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 17:33 queuedata.json
[2025-10-10 05:41:33] -rw-r--r--. 1 boincer umatlas       100 Oct 10 02:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 05:41:33] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 02:38 run_atlas
[2025-10-10 05:41:33] -rw-r--r--. 1 boincer umatlas       105 Oct 10 02:38 job.xml
[2025-10-10 05:41:33] -rw-r--r--. 2 boincer umatlas 220650474 Oct 10 02:38 EVNT.46676267._001120.pool.root.1
[2025-10-10 05:41:33] -rw-r--r--. 2 boincer umatlas    569680 Oct 10 02:38 input.tar.gz
[2025-10-10 05:41:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 02:38 start_atlas.sh
[2025-10-10 05:41:33] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 02:38 shared
[2025-10-10 05:41:33] -rw-r--r--. 1 boincer umatlas         0 Oct 10 02:38 boinc_lockfile
[2025-10-10 05:41:33] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 02:39 pandaJob.out
[2025-10-10 05:41:33] -rw-------. 1 boincer umatlas    975446 Oct 10 02:40 agis_schedconf.cvmfs.json
[2025-10-10 05:41:33] drwx------. 5 boincer umatlas      4096 Oct 10 02:40 pilot3
[2025-10-10 05:41:33] -rw-------. 1 boincer umatlas 194045855 Oct 10 05:39 HITS.46676269._026622.pool.root.1
[2025-10-10 05:41:33] -rw-r--r--. 1 boincer umatlas       530 Oct 10 05:39 boinc_task_state.xml
[2025-10-10 05:41:33] -rw-------. 1 boincer umatlas      1044 Oct 10 05:40 memory_monitor_summary.json
[2025-10-10 05:41:33] -rw-------. 1 boincer umatlas   1560580 Oct 10 05:40 agis_ddmendpoints.agis.ALL.json
[2025-10-10 05:41:33] -rw-------. 1 boincer umatlas    419351 Oct 10 05:40 log.46676269._026622.job.log.tgz.1
[2025-10-10 05:41:33] -rw-------. 1 boincer umatlas        95 Oct 10 05:40 pilot_heartbeat.json
[2025-10-10 05:41:33] -rw-------. 1 boincer umatlas      7829 Oct 10 05:40 heartbeat.json
[2025-10-10 05:41:33] -rw-r--r--. 1 boincer umatlas      6659 Oct 10 05:40 init_data.xml
[2025-10-10 05:41:33] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 05:41 boinc_mmap_file
[2025-10-10 05:41:33] -rw-r--r--. 1 boincer umatlas        28 Oct 10 05:41 wrapper_checkpoint.txt
[2025-10-10 05:41:33] -rw-------. 1 boincer umatlas      4823 Oct 10 05:41 pilotlog.txt
[2025-10-10 05:41:33] -rw-------. 1 boincer umatlas   1456481 Oct 10 05:41 log.46676269._026622.job.log.1
[2025-10-10 05:41:33] -rw-------. 1 boincer umatlas       357 Oct 10 05:41 output.list
[2025-10-10 05:41:33] -rw-r--r--. 1 boincer umatlas       620 Oct 10 05:41 runtime_log
[2025-10-10 05:41:33] -rw-------. 1 boincer umatlas   1894400 Oct 10 05:41 result.tar.gz
[2025-10-10 05:41:33] -rw-r--r--. 1 boincer umatlas      8694 Oct 10 05:41 runtime_log.err
[2025-10-10 05:41:33] -rw-------. 1 boincer umatlas       652 Oct 10 05:41 6nWNDm9QDR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3ObNDmvOnn2n.diag
[2025-10-10 05:41:33] -rw-r--r--. 1 boincer umatlas     21288 Oct 10 05:41 stderr.txt
[2025-10-10 05:41:33] HITS file was successfully produced:
[2025-10-10 05:41:33] -rw-------. 1 boincer umatlas 194045855 Oct 10 05:39 shared/HITS.pool.root.1
[2025-10-10 05:41:33]  *** Contents of shared directory: ***
[2025-10-10 05:41:33] total 407412
[2025-10-10 05:41:33] -rw-r--r--. 2 boincer umatlas 220650474 Oct 10 02:38 ATLAS.root_0
[2025-10-10 05:41:33] -rw-r--r--. 2 boincer umatlas    569680 Oct 10 02:38 input.tar.gz
[2025-10-10 05:41:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 02:38 start_atlas.sh
[2025-10-10 05:41:33] -rw-------. 1 boincer umatlas 194045855 Oct 10 05:39 HITS.pool.root.1
[2025-10-10 05:41:33] -rw-------. 1 boincer umatlas   1894400 Oct 10 05:41 result.tar.gz
05:41:35 (945221): run_atlas exited; CPU time 49184.992700
05:41:35 (945221): called boinc_finish(0)

</stderr_txt>
]]>

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