Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:23:43 (3112796): wrapper (7.7.26015): starting
11:23:43 (3112796): wrapper: running run_atlas (--nthreads 4)
[2025-10-14 11:23:43] Arguments: --nthreads 4
[2025-10-14 11:23:43] Threads: 4
[2025-10-14 11:23:43] Checking for CVMFS
[2025-10-14 11:23:43] No cvmfs_config command found, will try listing directly
[2025-10-14 11:23:43] CVMFS is ok
[2025-10-14 11:23:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 11:23:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 11:23:44] Further information can be found at the LHC@home message board.
[2025-10-14 11:23:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 11:23:44] Checking for apptainer binary...
[2025-10-14 11:23:44] which: no apptainer in ((null))
[2025-10-14 11:23:44] apptainer is not installed, using version from CVMFS
[2025-10-14 11:23:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 11:23:44] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-10-14 11:23:44] apptainer works
[2025-10-14 11:23:44] Set ATHENA_PROC_NUMBER=4
[2025-10-14 11:23:44] Set ATHENA_CORE_NUMBER=4
[2025-10-14 11:23:44] Starting ATLAS job with PandaID=6837377545
[2025-10-14 11:23:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 14:44:55]  *** The last 200 lines of the pilot log: ***
[2025-10-14 14:44:55] 2025-10-14 12:42:49,949 | INFO     | time since job start (11921s) is within the limit (172800.0s)
[2025-10-14 14:44:55] 2025-10-14 12:42:50,656 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-14 14:44:55] 2025-10-14 12:42:50,666 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2684.1343281249997
[2025-10-14 14:44:55] 2025-10-14 12:42:50,679 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6837377545/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 14:44:55] 2025-10-14 12:42:50,680 | INFO     | extracted standard info from prmon json
[2025-10-14 14:44:55] 2025-10-14 12:42:50,680 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 14:44:55] 2025-10-14 12:42:50,681 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 14:44:55] 2025-10-14 12:42:50,681 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 14:44:55] 2025-10-14 12:42:50,681 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 14:44:55] 2025-10-14 12:42:50,685 | INFO     | fitting pss+swap vs Time
[2025-10-14 14:44:55] 2025-10-14 12:42:50,686 | INFO     | sum of square deviations: 2299168690.0
[2025-10-14 14:44:55] 2025-10-14 12:42:50,687 | INFO     | sum of deviations: 3963602489.999994
[2025-10-14 14:44:55] 2025-10-14 12:42:50,687 | INFO     | mean x: 1760439797.0
[2025-10-14 14:44:55] 2025-10-14 12:42:50,687 | INFO     | mean y: 2329497.3794871797
[2025-10-14 14:44:55] 2025-10-14 12:42:50,688 | INFO     | -- intersect: -3032542886.379481
[2025-10-14 14:44:55] 2025-10-14 12:42:50,688 | INFO     | intersect: -3032542886.379481
[2025-10-14 14:44:55] 2025-10-14 12:42:50,688 | INFO     | chi2: 1.3537749539926172
[2025-10-14 14:44:55] 2025-10-14 12:42:50,688 | INFO     | sum of square deviations: 2126802667.5
[2025-10-14 14:44:55] 2025-10-14 12:42:50,690 | INFO     | sum of deviations: 3856913520.4999995
[2025-10-14 14:44:55] 2025-10-14 12:42:50,690 | INFO     | mean x: 1760439644.5
[2025-10-14 14:44:55] 2025-10-14 12:42:50,690 | INFO     | mean y: 2329402.857894737
[2025-10-14 14:44:55] 2025-10-14 12:42:50,690 | INFO     | -- intersect: -3190192202.7678714
[2025-10-14 14:44:55] 2025-10-14 12:42:50,690 | INFO     | intersect: -3190192202.7678714
[2025-10-14 14:44:55] 2025-10-14 12:42:50,690 | INFO     | chi2: 1.3541242108723668
[2025-10-14 14:44:55] 2025-10-14 12:42:50,690 | INFO     | current chi2=1.3541242108723668 (change=-0.025798739939720525 %)
[2025-10-14 14:44:55] 2025-10-14 12:42:50,691 | INFO     | right removable region: 189
[2025-10-14 14:44:55] 2025-10-14 12:42:50,691 | INFO     | sum of square deviations: 2126802667.5
[2025-10-14 14:44:55] 2025-10-14 12:42:50,692 | INFO     | sum of deviations: -19519708084.499996
[2025-10-14 14:44:55] 2025-10-14 12:42:50,692 | INFO     | mean x: 1760439949.5
[2025-10-14 14:44:55] 2025-10-14 12:42:50,692 | INFO     | mean y: 2349974.3842105265
[2025-10-14 14:44:55] 2025-10-14 12:42:50,692 | INFO     | -- intersect: 16159595984.85919
[2025-10-14 14:44:55] 2025-10-14 12:42:50,693 | INFO     | intersect: 16159595984.85919
[2025-10-14 14:44:55] 2025-10-14 12:42:50,693 | INFO     | chi2: 0.053304650433572916
[2025-10-14 14:44:55] 2025-10-14 12:42:50,693 | INFO     | current chi2=0.053304650433572916 (change=96.06251760853128 %)
[2025-10-14 14:44:55] 2025-10-14 12:42:50,693 | INFO     | sum of square deviations: 1963274020.0
[2025-10-14 14:44:55] 2025-10-14 12:42:50,694 | INFO     | sum of deviations: -15821905805.000002
[2025-10-14 14:44:55] 2025-10-14 12:42:50,695 | INFO     | mean x: 1760440102.0
[2025-10-14 14:44:55] 2025-10-14 12:42:50,695 | INFO     | mean y: 2346521.0432432434
[2025-10-14 14:44:55] 2025-10-14 12:42:50,695 | INFO     | -- intersect: 14189626129.209501
[2025-10-14 14:44:55] 2025-10-14 12:42:50,695 | INFO     | intersect: 14189626129.209501
[2025-10-14 14:44:55] 2025-10-14 12:42:50,695 | INFO     | chi2: 0.047667179767098784
[2025-10-14 14:44:55] 2025-10-14 12:42:50,695 | INFO     | current chi2=0.047667179767098784 (change=10.5759452892378 %)
[2025-10-14 14:44:55] 2025-10-14 12:42:50,695 | INFO     | left removable region: 20
[2025-10-14 14:44:55] 2025-10-14 12:42:50,696 | INFO     | sum of square deviations: 1496660620.0
[2025-10-14 14:44:55] 2025-10-14 12:42:50,697 | INFO     | sum of deviations: -9557870278.000002
[2025-10-14 14:44:55] 2025-10-14 12:42:50,697 | INFO     | mean x: 1760440224.0
[2025-10-14 14:44:55] 2025-10-14 12:42:50,697 | INFO     | mean y: 2340701.2603550297
[2025-10-14 14:44:55] 2025-10-14 12:42:50,697 | INFO     | -- intersect: 11244741996.72924
[2025-10-14 14:44:55] 2025-10-14 12:42:50,697 | INFO     | intersect: 11244741996.72924
[2025-10-14 14:44:55] 2025-10-14 12:42:50,697 | INFO     | chi2: 0.03735137505690598
[2025-10-14 14:44:55] 2025-10-14 12:42:50,698 | INFO     | -- intersect: 11244741996.72924
[2025-10-14 14:44:55] 2025-10-14 12:42:50,698 | INFO     | current memory leak: -6.39 B/s (using 169 data points, chi2=0.04)
[2025-10-14 14:44:55] 2025-10-14 12:42:50,698 | INFO     | could have reported an average CPU frequency of 2612 MHz (10 samples)
[2025-10-14 14:44:55] 2025-10-14 12:42:50,699 | INFO     | ..............................
[2025-10-14 14:44:55] 2025-10-14 12:42:50,699 | INFO     | . Timing measurements:
[2025-10-14 14:44:55] 2025-10-14 12:42:50,699 | INFO     | . get job = 0 s
[2025-10-14 14:44:55] 2025-10-14 12:42:50,699 | INFO     | . initial setup = 1 s
[2025-10-14 14:44:55] 2025-10-14 12:42:50,699 | INFO     | . payload setup = 8 s
[2025-10-14 14:44:55] 2025-10-14 12:42:50,699 | INFO     | . stage-in = 0 s
[2025-10-14 14:44:55] 2025-10-14 12:42:50,699 | INFO     | . payload execution = 11887 s
[2025-10-14 14:44:55] 2025-10-14 12:42:50,699 | INFO     | . stage-out = 1 s
[2025-10-14 14:44:55] 2025-10-14 12:42:50,699 | INFO     | . log creation = 0 s
[2025-10-14 14:44:55] 2025-10-14 12:42:50,699 | INFO     | ..............................
[2025-10-14 14:44:55] 2025-10-14 12:42:50,800 | INFO     | 
[2025-10-14 14:44:55] 2025-10-14 12:42:50,801 | INFO     | job summary report
[2025-10-14 14:44:55] 2025-10-14 12:42:50,801 | INFO     | --------------------------------------------------
[2025-10-14 14:44:55] 2025-10-14 12:42:50,801 | INFO     | PanDA job id: 6837377545
[2025-10-14 14:44:55] 2025-10-14 12:42:50,801 | INFO     | task id: 46676269
[2025-10-14 14:44:55] 2025-10-14 12:42:50,801 | INFO     | errors: (none)
[2025-10-14 14:44:55] 2025-10-14 12:42:50,801 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 14:44:55] 2025-10-14 12:42:50,801 | INFO     | pilot state: finished 
[2025-10-14 14:44:55] 2025-10-14 12:42:50,801 | INFO     | transexitcode: 0
[2025-10-14 14:44:55] 2025-10-14 12:42:50,801 | INFO     | exeerrorcode: 0
[2025-10-14 14:44:55] 2025-10-14 12:42:50,801 | INFO     | exeerrordiag: 
[2025-10-14 14:44:55] 2025-10-14 12:42:50,802 | INFO     | exitcode: 0
[2025-10-14 14:44:55] 2025-10-14 12:42:50,802 | INFO     | exitmsg: OK
[2025-10-14 14:44:55] 2025-10-14 12:42:50,802 | INFO     | cpuconsumptiontime: 40989 s
[2025-10-14 14:44:55] 2025-10-14 12:42:50,802 | INFO     | nevents: 400
[2025-10-14 14:44:55] 2025-10-14 12:42:50,802 | INFO     | neventsw: 0
[2025-10-14 14:44:55] 2025-10-14 12:42:50,802 | INFO     | pid: 3135259
[2025-10-14 14:44:55] 2025-10-14 12:42:50,802 | INFO     | pgrp: 3135259
[2025-10-14 14:44:55] 2025-10-14 12:42:50,802 | INFO     | corecount: 4
[2025-10-14 14:44:55] 2025-10-14 12:42:50,802 | INFO     | event service: False
[2025-10-14 14:44:55] 2025-10-14 12:42:50,802 | INFO     | sizes: {0: 2348868, 1: 2348868, 6: 2349158, 11: 2349186, 11900: 2379124, 11901: 2388144, 11902: 2388328, 11906: 2388522}
[2025-10-14 14:44:55] 2025-10-14 12:42:50,802 | INFO     | --------------------------------------------------
[2025-10-14 14:44:55] 2025-10-14 12:42:50,802 | INFO     | 
[2025-10-14 14:44:55] 2025-10-14 12:42:50,803 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-10-14 14:44:55] 2025-10-14 12:42:50,824 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 14:44:55] 2025-10-14 12:42:50,824 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 14:44:55] 2025-10-14 12:42:50,824 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 14:44:55] 2025-10-14 12:42:50,824 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 14:44:55] 2025-10-14 12:42:50,824 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 14:44:55] 2025-10-14 12:42:50,824 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 14:44:55] 2025-10-14 12:42:50,824 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 14:44:55] 2025-10-14 12:42:50,824 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 14:44:55] 2025-10-14 12:42:50,825 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 14:44:55] 2025-10-14 12:42:50,825 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 14:44:55] 2025-10-14 12:42:50,825 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 14:44:55] 2025-10-14 12:42:50,825 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 14:44:55] 2025-10-14 12:42:50,825 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 14:44:55] 2025-10-14 12:42:50,825 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 14:44:55] 2025-10-14 12:42:50,825 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 14:44:55] 2025-10-14 12:42:50,825 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 14:44:55] 2025-10-14 12:42:50,825 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 14:44:55] 2025-10-14 12:42:50,825 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 14:44:55] 2025-10-14 12:42:50,826 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 14:44:55] 2025-10-14 12:42:50,826 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 14:44:55] 2025-10-14 12:42:50,826 | INFO     | job 6837377545 has completed (purged errors)
[2025-10-14 14:44:55] 2025-10-14 12:42:50,826 | INFO     | overall cleanup function is called
[2025-10-14 14:44:55] 2025-10-14 12:42:51,834 | INFO     | --- collectZombieJob: --- 10, [3135259]
[2025-10-14 14:44:55] 2025-10-14 12:42:51,834 | INFO     | zombie collector waiting for pid 3135259
[2025-10-14 14:44:55] 2025-10-14 12:42:51,834 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 14:44:55] 2025-10-14 12:42:51,834 | INFO     | collected zombie processes
[2025-10-14 14:44:55] 2025-10-14 12:42:51,835 | INFO     | will attempt to kill all subprocesses of pid=3135259
[2025-10-14 14:44:55] 2025-10-14 12:42:52,241 | INFO     | process IDs to be killed: [3135259] (in reverse order)
[2025-10-14 14:44:55] 2025-10-14 12:42:52,360 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 14:44:55] 2025-10-14 12:42:52,360 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 14:44:55] 2025-10-14 12:42:52,373 | INFO     | did not find any defunct processes belonging to 3135259
[2025-10-14 14:44:55] 2025-10-14 12:42:52,386 | INFO     | did not find any defunct processes belonging to 3135259
[2025-10-14 14:44:55] 2025-10-14 12:42:52,386 | INFO     | ready for new job
[2025-10-14 14:44:55] 2025-10-14 12:42:52,386 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 14:44:55] 2025-10-14 12:42:52,389 | INFO     | ***************************************
[2025-10-14 14:44:55] 2025-10-14 12:42:52,389 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 14:44:55] 2025-10-14 12:42:52,389 | INFO     | ***************************************
[2025-10-14 14:44:55] 2025-10-14 12:42:52,389 | INFO     | 
[2025-10-14 14:44:55] 2025-10-14 12:42:52,393 | INFO     | architecture information:
[2025-10-14 14:44:55] 2025-10-14 12:42:52,393 | INFO     | executing command: cat /etc/os-release
[2025-10-14 14:44:55] 2025-10-14 12:42:52,409 | INFO     | cat /etc/os-release:
[2025-10-14 14:44:55] NAME="CentOS Linux"
[2025-10-14 14:44:55] VERSION="7 (Core)"
[2025-10-14 14:44:55] ID="centos"
[2025-10-14 14:44:55] ID_LIKE="rhel fedora"
[2025-10-14 14:44:55] VERSION_ID="7"
[2025-10-14 14:44:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 14:44:55] ANSI_COLOR="0;31"
[2025-10-14 14:44:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 14:44:55] HOME_URL="https://www.centos.org/"
[2025-10-14 14:44:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 14:44:55] 
[2025-10-14 14:44:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 14:44:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 14:44:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 14:44:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 14:44:55] 
[2025-10-14 14:44:55] 2025-10-14 12:42:52,409 | INFO     | ***************************************
[2025-10-14 14:44:55] 2025-10-14 12:42:52,912 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-10-14 14:44:55] 2025-10-14 12:42:52,928 | INFO     | sufficient remaining disk space (701193256960 B)
[2025-10-14 14:44:55] 2025-10-14 12:42:52,929 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 14:44:55] 2025-10-14 12:42:52,929 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 14:44:55] 2025-10-14 12:42:52,929 | INFO     | update_server=False
[2025-10-14 14:44:55] 2025-10-14 12:42:52,929 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 14:44:55] 2025-10-14 12:42:52,929 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 14:44:55] 2025-10-14 12:42:53,405 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-14 14:44:55] 2025-10-14 12:42:53,406 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-14 14:44:55] 2025-10-14 12:42:53,406 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 14:44:55] 2025-10-14 12:42:53,406 | INFO     | will abort loop
[2025-10-14 14:44:55] 2025-10-14 12:42:53,838 | INFO     | all data control threads have been joined
[2025-10-14 14:44:55] 2025-10-14 12:42:53,934 | INFO     | [job] retrieve thread has finished
[2025-10-14 14:44:55] 2025-10-14 12:42:53,962 | INFO     | all payload control threads have been joined
[2025-10-14 14:44:55] 2025-10-14 12:42:53,982 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 14:44:55] 2025-10-14 12:42:54,068 | INFO     | all job control threads have been joined
[2025-10-14 14:44:55] 2025-10-14 12:42:54,096 | INFO     | [payload] failed_post thread has finished
[2025-10-14 14:44:55] 2025-10-14 12:42:54,096 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 14:44:55] 2025-10-14 12:42:54,411 | INFO     | [job] job monitor thread has finished
[2025-10-14 14:44:55] 2025-10-14 12:42:54,488 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 14:44:55] 2025-10-14 12:42:54,494 | INFO     | [data] copytool_in thread has finished
[2025-10-14 14:44:55] 2025-10-14 12:42:54,707 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 14:44:55] 2025-10-14 12:42:54,842 | INFO     | [data] control thread has finished
[2025-10-14 14:44:55] 2025-10-14 12:42:54,861 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 14:44:55] 2025-10-14 12:42:54,963 | INFO     | [payload] control thread has finished
[2025-10-14 14:44:55] 2025-10-14 12:42:55,071 | INFO     | [job] control thread has finished
[2025-10-14 14:44:55] 2025-10-14 12:42:55,176 | INFO     | [payload] validate_post thread has finished
[2025-10-14 14:44:55] 2025-10-14 12:42:55,436 | INFO     | [job] validate thread has finished
[2025-10-14 14:44:55] 2025-10-14 12:42:55,805 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 14:44:55] 2025-10-14 12:42:55,983 | INFO     | [data] copytool_out thread has finished
[2025-10-14 14:44:55] 2025-10-14 12:42:56,807 | INFO     | [job] queue monitor thread has finished
[2025-10-14 14:44:55] 2025-10-14 12:42:56,935 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 14:44:55] 2025-10-14 12:43:23,507 | INFO     | PID=3120173 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 14:44:55] 2025-10-14 12:43:23,507 | INFO     | .. there are 8 such processes running
[2025-10-14 14:44:55] 2025-10-14 12:43:23,508 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 14:44:55] 2025-10-14 12:43:23,508 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 14:44:55] 2025-10-14 12:43:23,509 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 14:44:55] 2025-10-14 12:43:28,195 | INFO     | [monitor] cgroup control has ended
[2025-10-14 14:44:55] 2025-10-14 12:43:30,183 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23427278092096)>', '<ExcThread(monitor, started 23427039590144)>']
[2025-10-14 14:44:55] 2025-10-14 12:43:30,543 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 14:44:55] 2025-10-14 12:43:30,544 | INFO     | [monitor] control thread has ended
[2025-10-14 14:44:55] 2025-10-14 12:43:35,207 | INFO     | all workflow threads have been joined
[2025-10-14 14:44:55] 2025-10-14 12:43:35,208 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 14:44:55] 2025-10-14 12:43:35,208 | INFO     | traces error code: 0
[2025-10-14 14:44:55] 2025-10-14 12:43:35,208 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 14:44:55] 2025-10-14 12:43:35,385 [wrapper] ==== pilot stdout END ====
[2025-10-14 14:44:55] 2025-10-14 12:43:35,388 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 14:44:55] 2025-10-14 12:43:35,392 [wrapper] pilotpid: 3120173
[2025-10-14 14:44:55] 2025-10-14 12:43:35,394 [wrapper] Pilot exit status: 0
[2025-10-14 14:44:55] 2025-10-14 12:43:35,405 [wrapper] pandaids: 6837377545
[2025-10-14 14:44:55] 2025-10-14 12:43:35,478 [wrapper] cleanup supervisor_pilot 3419180 3120174
[2025-10-14 14:44:55] 2025-10-14 12:43:35,481 [wrapper] Test setup, not cleaning
[2025-10-14 14:44:55] 2025-10-14 12:43:35,484 [wrapper] apfmon messages muted
[2025-10-14 14:44:55] 2025-10-14 12:43:35,486 [wrapper] ==== wrapper stdout END ====
[2025-10-14 14:44:55] 2025-10-14 12:43:35,489 [wrapper] ==== wrapper stderr END ====
[2025-10-14 14:44:55]  *** Error codes and diagnostics ***
[2025-10-14 14:44:55]     "exeErrorCode": 0,
[2025-10-14 14:44:55]     "exeErrorDiag": "",
[2025-10-14 14:44:55]     "pilotErrorCode": 0,
[2025-10-14 14:44:55]     "pilotErrorDiag": "",
[2025-10-14 14:44:55]  *** Listing of results directory ***
[2025-10-14 14:44:55] total 405128
[2025-10-14 14:44:55] -rw-r--r-- 1 boinc boinc    557409 Oct 10 02:42 pilot3.tar.gz
[2025-10-14 14:44:55] -rw-r--r-- 1 boinc boinc      5112 Oct 10 02:55 queuedata.json
[2025-10-14 14:44:55] -rwx------ 1 boinc boinc     36292 Oct 10 02:56 runpilot2-wrapper.sh
[2025-10-14 14:44:55] -rw-r--r-- 1 boinc boinc       100 Oct 14 11:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 14:44:55] -rwxr-xr-x 1 boinc boinc      7986 Oct 14 11:23 run_atlas
[2025-10-14 14:44:55] -rw-r--r-- 1 boinc boinc       105 Oct 14 11:23 job.xml
[2025-10-14 14:44:55] -rw-r--r-- 2 boinc boinc 219590803 Oct 14 11:23 EVNT.46676267._001074.pool.root.1
[2025-10-14 14:44:55] -rw-r--r-- 1 boinc boinc      6634 Oct 14 11:23 init_data.xml
[2025-10-14 14:44:55] drwxrwx--x 2 boinc boinc      4096 Oct 14 11:23 shared
[2025-10-14 14:44:55] -rw-r--r-- 2 boinc boinc    569682 Oct 14 11:23 input.tar.gz
[2025-10-14 14:44:55] -rw-r--r-- 2 boinc boinc     15120 Oct 14 11:23 start_atlas.sh
[2025-10-14 14:44:55] -rw-r--r-- 1 boinc boinc         0 Oct 14 11:23 boinc_lockfile
[2025-10-14 14:44:55] -rw-r--r-- 1 boinc boinc      2550 Oct 14 11:23 pandaJob.out
[2025-10-14 14:44:55] -rw------- 1 boinc boinc    972837 Oct 14 11:24 agis_schedconf.cvmfs.json
[2025-10-14 14:44:55] drwx------ 5 boinc boinc      4096 Oct 14 11:24 pilot3
[2025-10-14 14:44:55] -rw------- 1 boinc boinc 187279110 Oct 14 14:42 HITS.46676269._029252.pool.root.1
[2025-10-14 14:44:55] -rw-r--r-- 1 boinc boinc       528 Oct 14 14:42 boinc_task_state.xml
[2025-10-14 14:44:55] -rw------- 1 boinc boinc      1029 Oct 14 14:42 memory_monitor_summary.json
[2025-10-14 14:44:55] -rw------- 1 boinc boinc   1560580 Oct 14 14:42 agis_ddmendpoints.agis.ALL.json
[2025-10-14 14:44:55] -rw------- 1 boinc boinc    370603 Oct 14 14:42 log.46676269._029252.job.log.tgz.1
[2025-10-14 14:44:55] -rw------- 1 boinc boinc      7827 Oct 14 14:42 heartbeat.json
[2025-10-14 14:44:55] -rw------- 1 boinc boinc        95 Oct 14 14:43 pilot_heartbeat.json
[2025-10-14 14:44:55] -rw------- 1 boinc boinc      5019 Oct 14 14:43 pilotlog.txt
[2025-10-14 14:44:55] -rw------- 1 boinc boinc   1665937 Oct 14 14:43 log.46676269._029252.job.log.1
[2025-10-14 14:44:55] -rw------- 1 boinc boinc       357 Oct 14 14:43 output.list
[2025-10-14 14:44:55] -rw-r--r-- 1 boinc boinc       620 Oct 14 14:43 runtime_log
[2025-10-14 14:44:55] -rw------- 1 boinc boinc   2058240 Oct 14 14:43 result.tar.gz
[2025-10-14 14:44:55] -rw-r--r-- 1 boinc boinc      9070 Oct 14 14:43 runtime_log.err
[2025-10-14 14:44:55] -rw------- 1 boinc boinc       665 Oct 14 14:43 CigNDm5bGR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmiobNDmXshDpm.diag
[2025-10-14 14:44:55] -rw-r--r-- 1 boinc boinc        26 Oct 14 14:44 wrapper_checkpoint.txt
[2025-10-14 14:44:55] -rw-r--r-- 1 boinc boinc      8192 Oct 14 14:44 boinc_mmap_file
[2025-10-14 14:44:55] -rw-r--r-- 1 boinc boinc     20920 Oct 14 14:44 stderr.txt
[2025-10-14 14:44:55] HITS file was successfully produced:
[2025-10-14 14:44:55] -rw------- 1 boinc boinc 187279110 Oct 14 14:42 shared/HITS.pool.root.1
[2025-10-14 14:44:55]  *** Contents of shared directory: ***
[2025-10-14 14:44:55] total 399936
[2025-10-14 14:44:55] -rw-r--r-- 2 boinc boinc 219590803 Oct 14 11:23 ATLAS.root_0
[2025-10-14 14:44:55] -rw-r--r-- 2 boinc boinc    569682 Oct 14 11:23 input.tar.gz
[2025-10-14 14:44:55] -rw-r--r-- 2 boinc boinc     15120 Oct 14 11:23 start_atlas.sh
[2025-10-14 14:44:55] -rw------- 1 boinc boinc 187279110 Oct 14 14:42 HITS.pool.root.1
[2025-10-14 14:44:55] -rw------- 1 boinc boinc   2058240 Oct 14 14:43 result.tar.gz
14:44:57 (3112796): run_atlas exited; CPU time 41496.021507
14:44:57 (3112796): called boinc_finish(0)

</stderr_txt>
]]>

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