Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-12 23:23:12 (10708): vboxwrapper version 26210
2025-10-12 23:23:12 (10708): BOINC client version: 8.2.4
2025-10-12 23:23:13 (10708): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-10-12 23:23:13 (10708): Successfully copied 'init_data.xml' to the shared directory.
2025-10-12 23:23:13 (10708): Create VM. (boinc_d7459f6aee18e3a9, slot#0)
2025-10-12 23:23:14 (10708): Setting Memory Size for VM. (4200MB)
2025-10-12 23:23:14 (10708): Setting CPU Count for VM. (2)
2025-10-12 23:23:14 (10708): Setting Chipset Options for VM.
2025-10-12 23:23:15 (10708): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-12 23:23:15 (10708): Setting Boot Options for VM.
2025-10-12 23:23:15 (10708): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-12 23:23:16 (10708): Enabling VM Network Access.
2025-10-12 23:23:16 (10708): Disabling USB Support for VM.
2025-10-12 23:23:16 (10708): Disabling COM Port Support for VM.
2025-10-12 23:23:16 (10708): Disabling LPT Port Support for VM.
2025-10-12 23:23:17 (10708): Disabling Audio Support for VM.
2025-10-12 23:23:17 (10708): Disabling Clipboard Support for VM.
2025-10-12 23:23:17 (10708): Disabling Drag and Drop Support for VM.
2025-10-12 23:23:17 (10708): Adding storage controller(s) to VM.
2025-10-12 23:23:18 (10708): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-12 23:23:20 (10708): Adding VirtualBox Guest Additions to VM.
2025-10-12 23:23:20 (10708): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-12 23:23:20 (10708): forwarding host port 64741 to guest port 80
2025-10-12 23:23:21 (10708): Enabling remote desktop for VM.
2025-10-12 23:23:21 (10708): Enabling shared directory for VM.
2025-10-12 23:23:22 (10708): Starting VM using VBoxManage interface. (boinc_d7459f6aee18e3a9, slot#0)
2025-10-12 23:23:28 (10708): Successfully started VM. (PID = '2076')
2025-10-12 23:23:28 (10708): Reporting VM Process ID to BOINC.
2025-10-12 23:23:28 (10708): Guest Log: BIOS: VirtualBox 7.1.6
2025-10-12 23:23:28 (10708): Guest Log: CPUID EDX: 0x178bfbff
2025-10-12 23:23:28 (10708): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-12 23:23:28 (10708): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-12 23:23:28 (10708): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-12 23:23:28 (10708): Detected: Web Application Enabled (http://localhost:64741)
2025-10-12 23:23:28 (10708): Detected: Remote Desktop Enabled (localhost:64742)
2025-10-12 23:23:28 (10708): Preference change detected
2025-10-12 23:23:28 (10708): Setting CPU throttle for VM. (100%)
2025-10-12 23:23:28 (10708): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-12 23:23:30 (10708): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-12 23:23:30 (10708): Guest Log: BIOS: Booting from Hard Disk...
2025-10-12 23:23:33 (10708): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-12 23:23:33 (10708): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-12 23:23:33 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-12 23:23:38 (10708): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-12 23:23:38 (10708): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-12 23:23:51 (10708): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-12 23:23:51 (10708): Guest Log: 00:00:00.000230 main     Log opened 2025-10-12T23:23:49.105573000Z
2025-10-12 23:23:51 (10708): Guest Log: 00:00:00.000414 main     OS Product: Linux
2025-10-12 23:23:51 (10708): Guest Log: 00:00:00.000461 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-12 23:23:51 (10708): Guest Log: 00:00:00.000503 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-12 23:23:51 (10708): Guest Log: 00:00:00.000546 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-12 23:23:51 (10708): Guest Log: 00:00:00.000548 main     Process ID: 1271
2025-10-12 23:23:51 (10708): Guest Log: 00:00:00.000549 main     Package type: LINUX_64BITS_GENERIC
2025-10-12 23:23:51 (10708): Guest Log: 00:00:00.002058 main     5.2.32 r132073 started. Verbose level = 0
2025-10-12 23:23:51 (10708): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-12 23:23:51 (10708): Guest Log: [INFO] Mounting shared directory
2025-10-12 23:23:51 (10708): Guest Log: [INFO] Checking for init_data.xml
2025-10-12 23:23:55 (10708): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-12 23:23:55 (10708): Guest Log: [INFO] Detected branch: prod
2025-10-12 23:23:55 (10708): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-12 23:23:55 (10708): Guest Log: Copying input files
2025-10-12 23:23:57 (10708): Guest Log: Copied input files into RunAtlas.
2025-10-12 23:23:57 (10708): Guest Log: Detected user-configured HTTP proxy at http://192.168.35.184:3128 - will set in /etc/cvmfs/default.local
2025-10-12 23:24:01 (10708): Guest Log: 00:00:10.007590 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 390 674 000ns (GuestNow=1 760 304 240 722 111 000 ns GuestLast=1 760 311 429 112 785 000 ns fSetTimeLastLoop=true )
2025-10-12 23:24:08 (10708): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-12 23:24:09 (10708): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-12 23:24:09 (10708): Guest Log: 2.6.3.0 1543 0 29604 151638 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
2025-10-12 23:24:10 (10708): Guest Log: copied the webapp to /var/www
2025-10-12 23:24:10 (10708): Guest Log: ATHENA_PROC_NUMBER=2
2025-10-12 23:24:10 (10708): Guest Log: ATHENA_CORE_NUMBER=2
2025-10-12 23:24:10 (10708): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-12 23:24:10 (10708): Guest Log:  *** Starting ATLAS job. (PandaID=6837377239 taskID=46676269) ***
2025-10-13 01:03:38 (10708): Status Report: Elapsed Time: '6000.000000'
2025-10-13 01:03:38 (10708): Status Report: CPU Time: '10277.140625'
2025-10-13 02:43:49 (10708): Status Report: Elapsed Time: '12000.000000'
2025-10-13 02:43:49 (10708): Status Report: CPU Time: '21602.468750'
2025-10-13 04:23:59 (10708): Status Report: Elapsed Time: '18000.000000'
2025-10-13 04:23:59 (10708): Status Report: CPU Time: '32934.593750'
2025-10-13 06:04:08 (10708): Status Report: Elapsed Time: '24000.000000'
2025-10-13 06:04:08 (10708): Status Report: CPU Time: '44271.562500'
2025-10-13 07:44:18 (10708): Status Report: Elapsed Time: '30000.000000'
2025-10-13 07:44:18 (10708): Status Report: CPU Time: '55608.562500'
2025-10-13 09:24:38 (10708): Status Report: Elapsed Time: '36000.146404'
2025-10-13 09:24:38 (10708): Status Report: CPU Time: '66650.906250'
2025-10-13 10:45:43 (10708): Guest Log:  *** Job finished ***
2025-10-13 10:45:43 (10708): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-13 10:45:43 (10708): Guest Log: 2025-10-13 08:44:57,350 | INFO     | [data] copytool_out thread has finished
2025-10-13 10:45:43 (10708): Guest Log: 2025-10-13 08:44:58,871 | INFO     | [data] queue_monitor thread has finished
2025-10-13 10:45:43 (10708): Guest Log: 2025-10-13 08:45:33,316 | INFO     | [monitor] cgroup control has ended
2025-10-13 10:45:43 (10708): Guest Log: 2025-10-13 08:45:34,951 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140672550405952)>', '<ExcThread(monitor, started 140671948138240)>']
2025-10-13 10:45:43 (10708): Guest Log: 2025-10-13 08:45:35,645 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-13 10:45:43 (10708): Guest Log: 2025-10-13 08:45:35,645 | INFO     | [monitor] control thread has ended
2025-10-13 10:45:43 (10708): Guest Log: 2025-10-13 08:45:39,958 | INFO     | all workflow threads have been joined
2025-10-13 10:45:43 (10708): Guest Log: 2025-10-13 08:45:39,958 | INFO     | end of generic workflow (traces error code: 0)
2025-10-13 10:45:43 (10708): Guest Log: 2025-10-13 08:45:39,958 | INFO     | traces error code: 0
2025-10-13 10:45:43 (10708): Guest Log: 2025-10-13 08:45:39,958 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-13 10:45:43 (10708): Guest Log: 2025-10-13 08:45:40,107 [wrapper] ==== pilot stdout END ====
2025-10-13 10:45:43 (10708): Guest Log: 2025-10-13 08:45:40,113 [wrapper] ==== wrapper stdout RESUME ====
2025-10-13 10:45:43 (10708): Guest Log: 2025-10-13 08:45:40,118 [wrapper] pilotpid: 5914
2025-10-13 10:45:43 (10708): Guest Log: 2025-10-13 08:45:40,124 [wrapper] Pilot exit status: 0
2025-10-13 10:45:43 (10708): Guest Log: 2025-10-13 08:45:40,228 [wrapper] pandaids: 6837377239
2025-10-13 10:45:43 (10708): Guest Log: 2025-10-13 08:45:40,275 [wrapper] cleanup supervisor_pilot 23828 5915
2025-10-13 10:45:43 (10708): Guest Log: 2025-10-13 08:45:40,281 [wrapper] Test setup, not cleaning
2025-10-13 10:45:43 (10708): Guest Log: 2025-10-13 08:45:40,287 [wrapper] apfmon messages muted
2025-10-13 10:45:43 (10708): Guest Log: 2025-10-13 08:45:40,293 [wrapper] ==== wrapper stdout END ====
2025-10-13 10:45:43 (10708): Guest Log: 2025-10-13 08:45:40,299 [wrapper] ==== wrapper stderr END ====
2025-10-13 10:45:43 (10708): Guest Log:  *** Error codes and diagnostics ***
2025-10-13 10:45:43 (10708): Guest Log:     "exeErrorCode": 0,
2025-10-13 10:45:43 (10708): Guest Log:     "exeErrorDiag": "",
2025-10-13 10:45:43 (10708): Guest Log:     "pilotErrorCode": 0,
2025-10-13 10:45:43 (10708): Guest Log:     "pilotErrorDiag": "",
2025-10-13 10:45:43 (10708): Guest Log:  *** Listing of results directory ***
2025-10-13 10:45:43 (10708): Guest Log: total 206520
2025-10-13 10:45:43 (10708): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 10 00:28 pilot3.tar.gz
2025-10-13 10:45:43 (10708): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 10 00:36 queuedata.json
2025-10-13 10:45:43 (10708): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 10 00:37 runpilot2-wrapper.sh
2025-10-13 10:45:43 (10708): Guest Log: -rwxr-xr-x. 1 atlas atlas      8394 Oct 12 21:23 init_data.xml
2025-10-13 10:45:43 (10708): Guest Log: -rwxr-xr-x. 1 atlas atlas    569683 Oct 12 21:23 input.tar.gz
2025-10-13 10:45:43 (10708): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 12 21:23 start_atlas.sh
2025-10-13 10:45:43 (10708): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 12 21:23 EVNT.46676267._001059.pool.root.1 -> /data/./ATLAS.root_0
2025-10-13 10:45:43 (10708): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 12 21:24 pandaJob.out
2025-10-13 10:45:43 (10708): Guest Log: -rw-------. 1 atlas atlas    975528 Oct 12 21:24 agis_schedconf.cvmfs.json
2025-10-13 10:45:43 (10708): Guest Log: drwx------. 5 atlas atlas      4096 Oct 12 21:24 pilot3
2025-10-13 10:45:43 (10708): Guest Log: -rw-------. 1 atlas atlas 195243136 Oct 13 08:43 HITS.46676269._028975.pool.root.1
2025-10-13 10:45:43 (10708): Guest Log: -rw-------. 1 atlas atlas      1039 Oct 13 08:44 memory_monitor_summary.json
2025-10-13 10:45:43 (10708): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 13 08:44 agis_ddmendpoints.agis.ALL.json
2025-10-13 10:45:43 (10708): Guest Log: -rw-------. 1 atlas atlas    723421 Oct 13 08:44 log.46676269._028975.job.log.tgz.1
2025-10-13 10:45:43 (10708): Guest Log: -rw-------. 1 atlas atlas      7783 Oct 13 08:44 heartbeat.json
2025-10-13 10:45:43 (10708): Guest Log: -rw-------. 1 atlas atlas        95 Oct 13 08:44 pilot_heartbeat.json
2025-10-13 10:45:43 (10708): Guest Log: -rw-------. 1 atlas atlas      4612 Oct 13 08:45 pilotlog.txt
2025-10-13 10:45:43 (10708): Guest Log: -rw-------. 1 atlas atlas   5476873 Oct 13 08:45 log.46676269._028975.job.log.1
2025-10-13 10:45:43 (10708): Guest Log: -rw-------. 1 atlas atlas       357 Oct 13 08:45 output.list
2025-10-13 10:45:43 (10708): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 13 08:45 runtime_log
2025-10-13 10:45:43 (10708): Guest Log: -rw-------. 1 atlas atlas   6215680 Oct 13 08:45 result.tar.gz
2025-10-13 10:45:43 (10708): Guest Log: -rw-r--r--. 1 atlas atlas      8645 Oct 13 08:45 runtime_log.err
2025-10-13 10:45:43 (10708): Guest Log: -rw-------. 1 atlas atlas       664 Oct 13 08:45 IEpNDmXJGR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkmbNDmlW1tVn.diag
2025-10-13 10:45:43 (10708): Guest Log: Looking for outputfile HITS.46676269._028975.pool.root.1
2025-10-13 10:45:43 (10708): Guest Log: HITS file was successfully produced
2025-10-13 10:45:43 (10708): Guest Log: -rw-------. 1 atlas atlas 195243136 Oct 13 08:43 /home/atlas/RunAtlas/HITS.46676269._028975.pool.root.1
2025-10-13 10:45:45 (10708): Guest Log: Successfully finished the ATLAS job!
2025-10-13 10:45:45 (10708): Guest Log: Copying the results back to the shared directory!
2025-10-13 10:45:45 (10708): Guest Log:  *** Contents of shared directory: ***
2025-10-13 10:45:45 (10708): Guest Log: total 412564
2025-10-13 10:45:45 (10708): Guest Log: -rwxrwxrwx. 1 root root 220401515 Oct 12 21:23 ATLAS.root_0
2025-10-13 10:45:45 (10708): Guest Log: -rwxrwxrwx. 1 root root 195243136 Oct 13 08:45 HITS.pool.root.1
2025-10-13 10:45:45 (10708): Guest Log: -rwxrwxrwx. 1 root root      8394 Oct 12 21:23 init_data.xml
2025-10-13 10:45:45 (10708): Guest Log: -rwxrwxrwx. 1 root root    569683 Oct 10 06:17 input.tar.gz
2025-10-13 10:45:45 (10708): Guest Log: -rwxrwxrwx. 1 root root   6215680 Oct 13 08:45 result.tar.gz
2025-10-13 10:45:45 (10708): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 10 06:17 start_atlas.sh
2025-10-13 10:45:45 (10708): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-13 10:45:46 (10708): VM Completion File Detected.
2025-10-13 10:45:46 (10708): Powering off VM.
2025-10-13 10:45:46 (10708): Successfully stopped VM.
2025-10-13 10:45:46 (10708): Deregistering VM. (boinc_d7459f6aee18e3a9, slot#0)
2025-10-13 10:45:47 (10708): Removing network bandwidth throttle group from VM.
2025-10-13 10:45:47 (10708): Removing VM from VirtualBox.
2025-10-13 10:45:52 (10708): called boinc_finish(0)

</stderr_txt>
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