Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:55:15 (4064405): wrapper (7.7.26015): starting
22:55:15 (4064405): wrapper: running run_atlas (--nthreads 12)
[2025-10-09 22:55:15] Arguments: --nthreads 12
[2025-10-09 22:55:15] Threads: 12
[2025-10-09 22:55:15] Checking for CVMFS
[2025-10-09 22:55:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 22:55:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 22:55:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 22:55:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 22:55:16] 2.11.5.0 2572 28184 214404 151535 1 209 44124406 45568000 18461 130560 0 298990617 99.859 125007911 21791 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-09 22:55:16] CVMFS is ok
[2025-10-09 22:55:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 22:55:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 22:55:16] Further information can be found at the LHC@home message board.
[2025-10-09 22:55:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 22:55:16] Checking for apptainer binary...
[2025-10-09 22:55:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 22:55:16] Running /usr/bin/apptainer --version
[2025-10-09 22:55:16] apptainer version 1.4.1-1.el9
[2025-10-09 22:55:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 22:55:17] wns0095.triumf.lcg
[2025-10-09 22:55:17] apptainer works
[2025-10-09 22:55:17] Set ATHENA_PROC_NUMBER=12
[2025-10-09 22:55:17] Set ATHENA_CORE_NUMBER=12
[2025-10-09 22:55:17] Starting ATLAS job with PandaID=6837398649
[2025-10-09 22:55:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 23:00:54]  *** The last 200 lines of the pilot log: ***
[2025-10-09 23:00:55] 2025-10-10 06:00:03,585 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 23:00:55] 2025-10-10 06:00:03,585 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 23:00:55] 2025-10-10 06:00:03,585 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | WARNING  | wrong length of table data, x=[1760075829.0], y=[1925.0] (must be same and length>=4)
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | could have reported an average CPU frequency of 2696 MHz (4 samples)
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | ..............................
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | . Timing measurements:
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | . get job = 0 s
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | . initial setup = 3 s
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | . payload setup = 21 s
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | . stage-in = 0 s
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | . payload execution = 54 s
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | . stage-out = 1 s
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | . log creation = 0 s
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | ..............................
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 23:00:55] 2025-10-10 06:00:03,587 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837398649/pilotlog.txt
[2025-10-09 23:00:55] 2025-10-10 06:00:03,643 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-09 23:00:55] - Log from pilotlog.txt -
[2025-10-09 23:00:55] 2025-10-10 06:00:03,584 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837398649/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 23:00:55] 2025-10-10 06:00:03,585 | INFO     | extracted standard info from prmon json
[2025-10-09 23:00:55] 2025-10-10 06:00:03,585 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 23:00:55] 2025-10-10 06:00:03,585 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 23:00:55] 2025-10-10 06:00:03,585 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 23:00:55] 2025-10-10 06:00:03,585 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | WARNING  | wrong length of table data, x=[1760075829.0], y=[1925.0] (must be same and length>=4)
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | could have reported an average CPU frequency of 2696 MHz (4 samples)
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | ..............................
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | . Timing measurements:
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | . get job = 0 s
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | . initial setup = 3 s
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | . payload setup = 21 s
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | . stage-in = 0 s
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | . payload execution = 54 s
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | . stage-out = 1 s
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | . log creation = 0 s
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | ..............................
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 23:00:55] 2025-10-10 06:00:03,587 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837398649/pilotlog.txt
[2025-10-09 23:00:55] 2025-10-10 06:00:03,643 | WARNING  | 
[2025-10-09 23:00:55] [begin log extracts]
[2025-10-09 23:00:55] - Log from pilotlog.txt -
[2025-10-09 23:00:55] 2025-10-10 06:00:03,584 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837398649/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 23:00:55] 2025-10-10 06:00:03,585 | INFO     | extracted standard info from prmon json
[2025-10-09 23:00:55] 2025-10-10 06:00:03,585 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 23:00:55] 2025-10-10 06:00:03,585 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 23:00:55] 2025-10-10 06:00:03,585 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 23:00:55] 2025-10-10 06:00:03,585 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | WARNING  | wrong length of table data, x=[1760075829.0], y=[1925.0] (must be same and length>=4)
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | could have reported an average CPU frequency of 2696 MHz (4 samples)
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | ..............................
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | . Timing measurements:
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | . get job = 0 s
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | . initial setup = 3 s
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | . payload setup = 21 s
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | . stage-in = 0 s
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | . payload execution = 54 s
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | . stage-out = 1 s
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | . log creation = 0 s
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | ..............................
[2025-10-09 23:00:55] 2025-10-10 06:00:03,586 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 23:00:55] 2025-10-10 06:00:03,587 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837398649/pilotlog.txt
[2025-10-09 23:00:55] [end log extracts]
[2025-10-09 23:00:55] 2025-10-10 06:00:03,643 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-09 23:00:55] 2025-10-10 06:00:03,645 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-09 23:00:55] 2025-10-10 06:00:03,991 | INFO     | 
[2025-10-09 23:00:55] 2025-10-10 06:00:03,991 | INFO     | job summary report
[2025-10-09 23:00:55] 2025-10-10 06:00:03,991 | INFO     | --------------------------------------------------
[2025-10-09 23:00:55] 2025-10-10 06:00:03,991 | INFO     | PanDA job id: 6837398649
[2025-10-09 23:00:55] 2025-10-10 06:00:03,991 | INFO     | task id: 46676269
[2025-10-09 23:00:55] 2025-10-10 06:00:03,991 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-09 22:57:36,476 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-09 23:00:55] 2025-10-10 06:00:03,991 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 23:00:55] 2025-10-10 06:00:03,991 | INFO     | pilot state: failed 
[2025-10-09 23:00:55] 2025-10-10 06:00:03,991 | INFO     | transexitcode: 65
[2025-10-09 23:00:55] 2025-10-10 06:00:03,991 | INFO     | exeerrorcode: 65
[2025-10-09 23:00:55] 2025-10-10 06:00:03,991 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 23:00:55] 2025-10-10 06:00:03,991 | INFO     | exitcode: 65
[2025-10-09 23:00:55] 2025-10-10 06:00:03,991 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 23:00:55] 2025-10-10 06:00:03,992 | INFO     | cpuconsumptiontime: 18 s
[2025-10-09 23:00:55] 2025-10-10 06:00:03,992 | INFO     | nevents: 0
[2025-10-09 23:00:55] 2025-10-10 06:00:03,992 | INFO     | neventsw: 0
[2025-10-09 23:00:55] 2025-10-10 06:00:03,992 | INFO     | pid: 4082020
[2025-10-09 23:00:55] 2025-10-10 06:00:03,992 | INFO     | pgrp: 4082020
[2025-10-09 23:00:55] 2025-10-10 06:00:03,992 | INFO     | corecount: 12
[2025-10-09 23:00:55] 2025-10-10 06:00:03,992 | INFO     | event service: False
[2025-10-09 23:00:55] 2025-10-10 06:00:03,992 | INFO     | sizes: {0: 2348854, 11: 2348854, 16: 2349144, 22: 2349172, 80: 2372514, 81: 2372490, 82: 2376938, 86: 2376994, 218: 2377160}
[2025-10-09 23:00:55] 2025-10-10 06:00:03,992 | INFO     | --------------------------------------------------
[2025-10-09 23:00:55] 2025-10-10 06:00:03,992 | INFO     | 
[2025-10-09 23:00:55] 2025-10-10 06:00:03,992 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-09 23:00:55] 2025-10-10 06:00:04,014 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 23:00:55] 2025-10-10 06:00:04,014 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 23:00:55] 2025-10-10 06:00:04,014 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 23:00:55] 2025-10-10 06:00:04,014 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 23:00:55] 2025-10-10 06:00:04,014 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 23:00:55] 2025-10-10 06:00:04,014 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 23:00:55] 2025-10-10 06:00:04,014 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 23:00:55] 2025-10-10 06:00:04,014 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 23:00:55] 2025-10-10 06:00:04,015 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 23:00:55] 2025-10-10 06:00:04,015 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 23:00:55] 2025-10-10 06:00:04,015 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 23:00:55] 2025-10-10 06:00:04,015 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 23:00:55] 2025-10-10 06:00:04,015 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 23:00:55] 2025-10-10 06:00:04,015 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 23:00:55] 2025-10-10 06:00:04,015 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 23:00:55] 2025-10-10 06:00:04,015 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 23:00:55] 2025-10-10 06:00:04,015 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 23:00:55] 2025-10-10 06:00:04,015 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 23:00:55] 2025-10-10 06:00:04,015 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 23:00:55] 2025-10-10 06:00:04,015 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 23:00:55] 2025-10-10 06:00:04,015 | INFO     | job 6837398649 has completed (purged errors)
[2025-10-09 23:00:55] 2025-10-10 06:00:04,016 | INFO     | overall cleanup function is called
[2025-10-09 23:00:55] 2025-10-10 06:00:05,022 | INFO     | --- collectZombieJob: --- 10, [4082020]
[2025-10-09 23:00:55] 2025-10-10 06:00:05,022 | INFO     | zombie collector waiting for pid 4082020
[2025-10-09 23:00:55] 2025-10-10 06:00:05,022 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 23:00:55] 2025-10-10 06:00:05,022 | INFO     | collected zombie processes
[2025-10-09 23:00:55] 2025-10-10 06:00:05,022 | INFO     | will attempt to kill all subprocesses of pid=4082020
[2025-10-09 23:00:55] 2025-10-10 06:00:06,069 | INFO     | process IDs to be killed: [4082020] (in reverse order)
[2025-10-09 23:00:55] 2025-10-10 06:00:06,154 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 23:00:55] 2025-10-10 06:00:06,154 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 23:00:55] 2025-10-10 06:00:06,164 | INFO     | did not find any defunct processes belonging to 4082020
[2025-10-09 23:00:55] 2025-10-10 06:00:06,173 | INFO     | did not find any defunct processes belonging to 4082020
[2025-10-09 23:00:55] 2025-10-10 06:00:06,173 | INFO     | ready for new job
[2025-10-09 23:00:55] 2025-10-10 06:00:06,173 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 23:00:55] 2025-10-10 06:00:06,175 | INFO     | ***************************************
[2025-10-09 23:00:55] 2025-10-10 06:00:06,175 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 23:00:55] 2025-10-10 06:00:06,175 | INFO     | ***************************************
[2025-10-09 23:00:55] 2025-10-10 06:00:06,175 | INFO     | 
[2025-10-09 23:00:55] 2025-10-10 06:00:06,177 | INFO     | architecture information:
[2025-10-09 23:00:55] 2025-10-10 06:00:06,177 | INFO     | executing command: cat /etc/os-release
[2025-10-09 23:00:55] 2025-10-10 06:00:06,188 | INFO     | cat /etc/os-release:
[2025-10-09 23:00:55] NAME="CentOS Linux"
[2025-10-09 23:00:55] VERSION="7 (Core)"
[2025-10-09 23:00:55] ID="centos"
[2025-10-09 23:00:55] ID_LIKE="rhel fedora"
[2025-10-09 23:00:55] VERSION_ID="7"
[2025-10-09 23:00:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 23:00:55] ANSI_COLOR="0;31"
[2025-10-09 23:00:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 23:00:55] HOME_URL="https://www.centos.org/"
[2025-10-09 23:00:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 23:00:55] 
[2025-10-09 23:00:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 23:00:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 23:00:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 23:00:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 23:00:55] 
[2025-10-09 23:00:55] 2025-10-10 06:00:06,189 | INFO     | ***************************************
[2025-10-09 23:00:55] 2025-10-10 06:00:06,692 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-09 23:00:55] 2025-10-10 06:00:06,710 | INFO     | sufficient remaining disk space (1710809415680 B)
[2025-10-09 23:00:55] 2025-10-10 06:00:06,710 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 23:00:55] 2025-10-10 06:00:06,711 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 23:00:55] 2025-10-10 06:00:06,711 | INFO     | update_server=False
[2025-10-09 23:00:55] 2025-10-10 06:00:06,711 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 23:00:55] 2025-10-10 06:00:06,712 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 23:00:55] 2025-10-10 06:00:06,716 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 23:00:55] 2025-10-10 06:00:06,717 | INFO     | aborting loop
[2025-10-09 23:00:55] 2025-10-10 06:00:06,729 | INFO     | all data control threads have been joined
[2025-10-09 23:00:55] 2025-10-10 06:00:06,802 | INFO     | all job control threads have been joined
[2025-10-09 23:00:55] 2025-10-10 06:00:06,827 | INFO     | all payload control threads have been joined
[2025-10-09 23:00:55] 2025-10-10 06:00:07,717 | INFO     | [job] retrieve thread has finished
[2025-10-09 23:00:55] 2025-10-10 06:00:07,723 | INFO     | [job] job monitor thread has finished
[2025-10-09 23:00:55] 2025-10-10 06:00:07,736 | INFO     | [data] control thread has finished
[2025-10-09 23:00:55] 2025-10-10 06:00:07,807 | INFO     | [job] control thread has finished
[2025-10-09 23:00:55] 2025-10-10 06:00:07,833 | INFO     | [payload] control thread has finished
[2025-10-09 23:00:55] 2025-10-10 06:00:07,927 | INFO     | [payload] failed_post thread has finished
[2025-10-09 23:00:55] 2025-10-10 06:00:08,095 | INFO     | [job] validate thread has finished
[2025-10-09 23:00:55] 2025-10-10 06:00:08,356 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 23:00:55] 2025-10-10 06:00:08,603 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 23:00:55] 2025-10-10 06:00:08,685 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 23:00:55] 2025-10-10 06:00:08,719 | INFO     | [data] copytool_out thread has finished
[2025-10-09 23:00:55] 2025-10-10 06:00:08,731 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 23:00:55] 2025-10-10 06:00:08,955 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 23:00:55] 2025-10-10 06:00:08,955 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 23:00:55] 2025-10-10 06:00:09,029 | INFO     | [data] copytool_in thread has finished
[2025-10-09 23:00:55] 2025-10-10 06:00:09,086 | INFO     | [payload] validate_post thread has finished
[2025-10-09 23:00:55] 2025-10-10 06:00:09,737 | INFO     | [job] queue monitor thread has finished
[2025-10-09 23:00:55] 2025-10-10 06:00:12,699 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 23:00:55] 2025-10-10 06:00:36,371 | INFO     | PID=4069217 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 23:00:55] 2025-10-10 06:00:36,372 | INFO     | .. there are 42 such processes running
[2025-10-09 23:00:55] 2025-10-10 06:00:36,372 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 23:00:55] 2025-10-10 06:00:36,372 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 23:00:55] 2025-10-10 06:00:36,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 23:00:55] 2025-10-10 06:00:47,301 | INFO     | [monitor] cgroup control has ended
[2025-10-09 23:00:55] 2025-10-10 06:00:49,157 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140380325320512)>', '<ExcThread(monitor, started 140379772929792)>']
[2025-10-09 23:00:55] 2025-10-10 06:00:49,458 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 23:00:55] 2025-10-10 06:00:49,459 | INFO     | [monitor] control thread has ended
[2025-10-09 23:00:55] 2025-10-10 06:00:54,198 | INFO     | all workflow threads have been joined
[2025-10-09 23:00:55] 2025-10-10 06:00:54,198 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 23:00:55] 2025-10-10 06:00:54,199 | INFO     | traces error code: 0
[2025-10-09 23:00:55] 2025-10-10 06:00:54,199 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 23:00:55] 2025-10-10 06:00:54,420 [wrapper] ==== pilot stdout END ====
[2025-10-09 23:00:55] 2025-10-10 06:00:54,433 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 23:00:55] 2025-10-10 06:00:54,446 [wrapper] pilotpid: 4069217
[2025-10-09 23:00:55] 2025-10-10 06:00:54,449 [wrapper] Pilot exit status: 0
[2025-10-09 23:00:55] 2025-10-10 06:00:54,465 [wrapper] pandaids: 6837398649
[2025-10-09 23:00:55] 2025-10-10 06:00:54,602 [wrapper] cleanup supervisor_pilot 4069223 4069218
[2025-10-09 23:00:55] 2025-10-10 06:00:54,604 [wrapper] Test setup, not cleaning
[2025-10-09 23:00:55] 2025-10-10 06:00:54,615 [wrapper] apfmon messages muted
[2025-10-09 23:00:55] 2025-10-10 06:00:54,628 [wrapper] ==== wrapper stdout END ====
[2025-10-09 23:00:55] 2025-10-10 06:00:54,669 [wrapper] ==== wrapper stderr END ====
[2025-10-09 23:00:55]  *** Error codes and diagnostics ***
[2025-10-09 23:00:55]     "exeErrorCode": 65,
[2025-10-09 23:00:55]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 23:00:55]     "pilotErrorCode": 1305,
[2025-10-09 23:00:55]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 23:00:55]  *** Listing of results directory ***
[2025-10-09 23:00:55] total 218872
[2025-10-09 23:00:55] -rw-r--r--. 1 boinc boinc    557409 Oct  9 19:47 pilot3.tar.gz
[2025-10-09 23:00:55] -rw-r--r--. 1 boinc boinc      5112 Oct  9 20:03 queuedata.json
[2025-10-09 23:00:55] -rwx------. 1 boinc boinc     36292 Oct  9 20:04 runpilot2-wrapper.sh
[2025-10-09 23:00:55] -rw-r--r--. 1 boinc boinc       100 Oct  9 22:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 23:00:55] -rwxr-xr-x. 1 boinc boinc      7986 Oct  9 22:55 run_atlas
[2025-10-09 23:00:55] -rw-r--r--. 1 boinc boinc       105 Oct  9 22:55 job.xml
[2025-10-09 23:00:55] -rw-r--r--. 1 boinc boinc      6594 Oct  9 22:55 init_data.xml
[2025-10-09 23:00:55] -rw-r--r--. 2 boinc boinc 219991436 Oct  9 22:55 EVNT.46676267._001266.pool.root.1
[2025-10-09 23:00:55] -rw-r--r--. 2 boinc boinc     15120 Oct  9 22:55 start_atlas.sh
[2025-10-09 23:00:55] drwxrwx--x. 2 boinc boinc      4096 Oct  9 22:55 shared
[2025-10-09 23:00:55] -rw-r--r--. 2 boinc boinc    569684 Oct  9 22:55 input.tar.gz
[2025-10-09 23:00:55] -rw-r--r--. 1 boinc boinc         0 Oct  9 22:55 boinc_lockfile
[2025-10-09 23:00:55] -rw-r--r--. 1 boinc boinc      2550 Oct  9 22:55 pandaJob.out
[2025-10-09 23:00:55] -rw-------. 1 boinc boinc    975446 Oct  9 22:55 agis_schedconf.cvmfs.json
[2025-10-09 23:00:55] -rw-------. 1 boinc boinc   1560580 Oct  9 22:55 agis_ddmendpoints.agis.ALL.json
[2025-10-09 23:00:55] drwx------. 5 boinc boinc      4096 Oct  9 22:55 pilot3
[2025-10-09 23:00:55] -rw-------. 1 boinc boinc       987 Oct  9 22:57 memory_monitor_summary.json
[2025-10-09 23:00:55] -rw-------. 1 boinc boinc     22618 Oct  9 22:57 log.46676269._031060.job.log.tgz.1
[2025-10-09 23:00:55] -rw-------. 1 boinc boinc        95 Oct  9 22:59 pilot_heartbeat.json
[2025-10-09 23:00:55] -rw-------. 1 boinc boinc      8432 Oct  9 23:00 heartbeat.json
[2025-10-09 23:00:55] -rw-r--r--. 1 boinc boinc       523 Oct  9 23:00 boinc_task_state.xml
[2025-10-09 23:00:55] -rw-r--r--. 1 boinc boinc      8192 Oct  9 23:00 boinc_mmap_file
[2025-10-09 23:00:55] -rw-r--r--. 1 boinc boinc        22 Oct  9 23:00 wrapper_checkpoint.txt
[2025-10-09 23:00:55] -rw-------. 1 boinc boinc      4823 Oct  9 23:00 pilotlog.txt
[2025-10-09 23:00:55] -rw-------. 1 boinc boinc     92556 Oct  9 23:00 log.46676269._031060.job.log.1
[2025-10-09 23:00:55] -rw-------. 1 boinc boinc       188 Oct  9 23:00 output.list
[2025-10-09 23:00:55] -rw-r--r--. 1 boinc boinc       620 Oct  9 23:00 runtime_log
[2025-10-09 23:00:55] -rw-------. 1 boinc boinc    133120 Oct  9 23:00 result.tar.gz
[2025-10-09 23:00:55] -rw-------. 1 boinc boinc       645 Oct  9 23:00 tDSLDmybIR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmO7bNDmJw6nTn.diag
[2025-10-09 23:00:55] -rw-r--r--. 1 boinc boinc      8528 Oct  9 23:00 runtime_log.err
[2025-10-09 23:00:55] -rw-r--r--. 1 boinc boinc     21804 Oct  9 23:00 stderr.txt
[2025-10-09 23:00:55] No HITS result produced
[2025-10-09 23:00:55]  *** Contents of shared directory: ***
[2025-10-09 23:00:55] total 215548
[2025-10-09 23:00:55] -rw-r--r--. 2 boinc boinc 219991436 Oct  9 22:55 ATLAS.root_0
[2025-10-09 23:00:55] -rw-r--r--. 2 boinc boinc     15120 Oct  9 22:55 start_atlas.sh
[2025-10-09 23:00:55] -rw-r--r--. 2 boinc boinc    569684 Oct  9 22:55 input.tar.gz
[2025-10-09 23:00:55] -rw-------. 1 boinc boinc    133120 Oct  9 23:00 result.tar.gz
23:00:56 (4064405): run_atlas exited; CPU time 28.473417
23:00:56 (4064405): called boinc_finish(0)

</stderr_txt>
]]>

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