Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-09 23:23:32 (24996): vboxwrapper version 26210
2025-10-09 23:23:32 (24996): BOINC client version: 8.2.4
2025-10-09 23:23:34 (24996): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2025-10-09 23:23:34 (24996): Successfully copied 'init_data.xml' to the shared directory.
2025-10-09 23:23:34 (24996): Create VM. (boinc_758264bb7e017e71, slot#1)
2025-10-09 23:23:35 (24996): Setting Memory Size for VM. (4800MB)
2025-10-09 23:23:35 (24996): Setting CPU Count for VM. (8)
2025-10-09 23:23:35 (24996): Setting Chipset Options for VM.
2025-10-09 23:23:36 (24996): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-09 23:23:36 (24996): Setting Boot Options for VM.
2025-10-09 23:23:36 (24996): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-09 23:23:37 (24996): Enabling VM Network Access.
2025-10-09 23:23:37 (24996): Disabling USB Support for VM.
2025-10-09 23:23:37 (24996): Disabling COM Port Support for VM.
2025-10-09 23:23:37 (24996): Disabling LPT Port Support for VM.
2025-10-09 23:23:38 (24996): Disabling Audio Support for VM.
2025-10-09 23:23:38 (24996): Disabling Clipboard Support for VM.
2025-10-09 23:23:38 (24996): Disabling Drag and Drop Support for VM.
2025-10-09 23:23:38 (24996): Adding storage controller(s) to VM.
2025-10-09 23:23:39 (24996): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-09 23:23:41 (24996): Adding VirtualBox Guest Additions to VM.
2025-10-09 23:23:41 (24996): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-09 23:23:41 (24996): forwarding host port 57511 to guest port 80
2025-10-09 23:23:42 (24996): Enabling remote desktop for VM.
2025-10-09 23:23:42 (24996): Enabling shared directory for VM.
2025-10-09 23:23:43 (24996): Starting VM using VBoxManage interface. (boinc_758264bb7e017e71, slot#1)
2025-10-09 23:23:48 (24996): Successfully started VM. (PID = '19320')
2025-10-09 23:23:48 (24996): Reporting VM Process ID to BOINC.
2025-10-09 23:23:48 (24996): Guest Log: BIOS: VirtualBox 7.2.2
2025-10-09 23:23:48 (24996): Guest Log: CPUID EDX: 0x178bfbff
2025-10-09 23:23:48 (24996): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-09 23:23:48 (24996): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-09 23:23:48 (24996): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-09 23:23:48 (24996): Detected: Web Application Enabled (http://localhost:57511)
2025-10-09 23:23:48 (24996): Detected: Remote Desktop Enabled (localhost:57521)
2025-10-09 23:23:48 (24996): Preference change detected
2025-10-09 23:23:48 (24996): Setting CPU throttle for VM. (100%)
2025-10-09 23:23:48 (24996): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-09 23:23:50 (24996): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-09 23:23:50 (24996): Guest Log: BIOS: Booting from Hard Disk...
2025-10-09 23:23:53 (24996): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-09 23:23:53 (24996): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-09 23:23:53 (24996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-09 23:24:03 (24996): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-09 23:24:03 (24996): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-09 23:24:58 (24996): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-09 23:24:58 (24996): Guest Log: 00:00:00.000056 main     Log opened 2025-10-09T23:25:01.316477000Z
2025-10-09 23:24:58 (24996): Guest Log: 00:00:00.000138 main     OS Product: Linux
2025-10-09 23:24:58 (24996): Guest Log: 00:00:00.000156 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-09 23:24:58 (24996): Guest Log: 00:00:00.000171 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-09 23:24:58 (24996): Guest Log: 00:00:00.000186 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-09 23:24:58 (24996): Guest Log: 00:00:00.000186 main     Process ID: 1377
2025-10-09 23:24:58 (24996): Guest Log: 00:00:00.000186 main     Package type: LINUX_64BITS_GENERIC
2025-10-09 23:24:58 (24996): Guest Log: 00:00:00.000593 main     5.2.32 r132073 started. Verbose level = 0
2025-10-09 23:24:59 (24996): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-09 23:24:59 (24996): Guest Log: [INFO] Mounting shared directory
2025-10-09 23:24:59 (24996): Guest Log: [INFO] Checking for init_data.xml
2025-10-09 23:25:03 (24996): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-09 23:25:03 (24996): Guest Log: [INFO] Detected branch: prod
2025-10-09 23:25:03 (24996): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-09 23:25:03 (24996): Guest Log: Copying input files
2025-10-09 23:25:04 (24996): Guest Log: Copied input files into RunAtlas.
2025-10-09 23:25:04 (24996): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-09 23:25:04 (24996): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-09 23:25:04 (24996): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-09 23:25:04 (24996): Guest Log: Further information can be found at the LHC@home message board.
2025-10-09 23:25:07 (24996): Guest Log: 00:00:10.036906 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 172 840 986 000ns (GuestNow=1 760 077 474 158 634 000 ns GuestLast=1 760 052 301 317 648 000 ns fSetTimeLastLoop=true )
2025-10-09 23:25:31 (24996): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-09 23:25:31 (24996): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-09 23:25:31 (24996): Guest Log: 2.6.3.0 1671 0 32192 151537 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-09 23:25:35 (24996): Guest Log: copied the webapp to /var/www
2025-10-09 23:25:35 (24996): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-09 23:25:35 (24996): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-09 23:25:40 (24996): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-09 23:25:40 (24996): Guest Log:  *** Starting ATLAS job. (PandaID=6837376439 taskID=46676269) ***
2025-10-09 23:51:46 (24996): VM state change detected. (old = 'running', new = 'paused')
2025-10-10 07:42:21 (24996): VM state change detected. (old = 'paused', new = 'running')
2025-10-10 07:42:26 (24996): Guest Log: 00:29:21.444372 timesync vgsvcTimeSyncWorker: Radical host time change: 28 237 906 000 000ns (HostNow=1 760 107 303 369 000 000 ns HostLast=1 760 079 065 463 000 000 ns)
2025-10-10 07:42:35 (24996): Guest Log: 00:29:31.445244 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 087 803 955 000ns (GuestNow=1 760 107 313 369 976 000 ns GuestLast=1 760 079 225 566 021 000 ns fSetTimeLastLoop=true )
2025-10-10 08:13:09 (24996): Guest Log:  *** Job finished ***
2025-10-10 08:13:09 (24996): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-10 08:13:09 (24996): Guest Log: 2025-10-10 15:14:56,834 | INFO     | [data] copytool_out thread has finished
2025-10-10 08:13:09 (24996): Guest Log: 2025-10-10 15:14:58,982 | INFO     | [data] queue_monitor thread has finished
2025-10-10 08:13:09 (24996): Guest Log: 2025-10-10 15:15:08,116 | INFO     | [monitor] cgroup control has ended
2025-10-10 08:13:09 (24996): Guest Log: 2025-10-10 15:15:09,039 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139985648551744)>', '<ExcThread(monitor, started 139984971482880)>']
2025-10-10 08:13:09 (24996): Guest Log: 2025-10-10 15:15:09,420 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-10 08:13:09 (24996): Guest Log: 2025-10-10 15:15:09,420 | INFO     | [monitor] control thread has ended
2025-10-10 08:13:09 (24996): Guest Log: 2025-10-10 15:15:14,047 | INFO     | all workflow threads have been joined
2025-10-10 08:13:09 (24996): Guest Log: 2025-10-10 15:15:14,047 | INFO     | end of generic workflow (traces error code: 0)
2025-10-10 08:13:09 (24996): Guest Log: 2025-10-10 15:15:14,047 | INFO     | traces error code: 0
2025-10-10 08:13:09 (24996): Guest Log: 2025-10-10 15:15:14,047 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-10 08:13:09 (24996): Guest Log: 2025-10-10 15:15:14,147 [wrapper] ==== pilot stdout END ====
2025-10-10 08:13:09 (24996): Guest Log: 2025-10-10 15:15:14,149 [wrapper] ==== wrapper stdout RESUME ====
2025-10-10 08:13:09 (24996): Guest Log: 2025-10-10 15:15:14,152 [wrapper] pilotpid: 6095
2025-10-10 08:13:09 (24996): Guest Log: 2025-10-10 15:15:14,154 [wrapper] Pilot exit status: 0
2025-10-10 08:13:09 (24996): Guest Log: 2025-10-10 15:15:14,217 [wrapper] pandaids: 6837376439
2025-10-10 08:13:09 (24996): Guest Log: 2025-10-10 15:15:14,237 [wrapper] cleanup supervisor_pilot 31792 6096
2025-10-10 08:13:09 (24996): Guest Log: 2025-10-10 15:15:14,239 [wrapper] Test setup, not cleaning
2025-10-10 08:13:09 (24996): Guest Log: 2025-10-10 15:15:14,241 [wrapper] apfmon messages muted
2025-10-10 08:13:09 (24996): Guest Log: 2025-10-10 15:15:14,243 [wrapper] ==== wrapper stdout END ====
2025-10-10 08:13:09 (24996): Guest Log: 2025-10-10 15:15:14,245 [wrapper] ==== wrapper stderr END ====
2025-10-10 08:13:09 (24996): Guest Log:  *** Error codes and diagnostics ***
2025-10-10 08:13:09 (24996): Guest Log:     "exeErrorCode": 0,
2025-10-10 08:13:09 (24996): Guest Log:     "exeErrorDiag": "",
2025-10-10 08:13:09 (24996): Guest Log:     "pilotErrorCode": 0,
2025-10-10 08:13:09 (24996): Guest Log:     "pilotErrorDiag": "",
2025-10-10 08:13:09 (24996): Guest Log:  *** Listing of results directory ***
2025-10-10 08:13:09 (24996): Guest Log: total 197672
2025-10-10 08:13:09 (24996): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct  9 23:47 pilot3.tar.gz
2025-10-10 08:13:09 (24996): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  9 23:57 runpilot2-wrapper.sh
2025-10-10 08:13:09 (24996): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  9 23:57 queuedata.json
2025-10-10 08:13:09 (24996): Guest Log: -rwxr-xr-x. 1 atlas atlas      8956 Oct 10 06:24 init_data.xml
2025-10-10 08:13:09 (24996): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 10 06:24 start_atlas.sh
2025-10-10 08:13:09 (24996): Guest Log: -rwxr-xr-x. 1 atlas atlas    569671 Oct 10 06:24 input.tar.gz
2025-10-10 08:13:09 (24996): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 10 06:24 EVNT.46676267._001196.pool.root.1 -> /data/./ATLAS.root_0
2025-10-10 08:13:09 (24996): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 10 06:25 pandaJob.out
2025-10-10 08:13:09 (24996): Guest Log: -rw-------. 1 atlas atlas    975446 Oct 10 06:25 agis_schedconf.cvmfs.json
2025-10-10 08:13:09 (24996): Guest Log: drwx------. 5 atlas atlas      4096 Oct 10 06:25 pilot3
2025-10-10 08:13:09 (24996): Guest Log: -rw-------. 1 atlas atlas        98 Oct 10 15:14 pilot_heartbeat.json
2025-10-10 08:13:09 (24996): Guest Log: -rw-------. 1 atlas atlas 196922625 Oct 10 15:14 HITS.46676269._028521.pool.root.1
2025-10-10 08:13:09 (24996): Guest Log: -rw-------. 1 atlas atlas      1026 Oct 10 15:14 memory_monitor_summary.json
2025-10-10 08:13:09 (24996): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 10 15:14 agis_ddmendpoints.agis.ALL.json
2025-10-10 08:13:09 (24996): Guest Log: -rw-------. 1 atlas atlas    300911 Oct 10 15:14 log.46676269._028521.job.log.tgz.1
2025-10-10 08:13:09 (24996): Guest Log: -rw-------. 1 atlas atlas      7791 Oct 10 15:14 heartbeat.json
2025-10-10 08:13:09 (24996): Guest Log: -rw-------. 1 atlas atlas      4612 Oct 10 15:15 pilotlog.txt
2025-10-10 08:13:09 (24996): Guest Log: -rw-------. 1 atlas atlas    525799 Oct 10 15:15 log.46676269._028521.job.log.1
2025-10-10 08:13:09 (24996): Guest Log: -rw-------. 1 atlas atlas       357 Oct 10 15:15 output.list
2025-10-10 08:13:09 (24996): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 10 15:15 runtime_log
2025-10-10 08:13:09 (24996): Guest Log: -rw-------. 1 atlas atlas    849920 Oct 10 15:15 result.tar.gz
2025-10-10 08:13:09 (24996): Guest Log: -rw-r--r--. 1 atlas atlas      8634 Oct 10 15:15 runtime_log.err
2025-10-10 08:13:09 (24996): Guest Log: -rw-------. 1 atlas atlas       651 Oct 10 15:15 2HsNDmdgFR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjhbNDm9qj2Im.diag
2025-10-10 08:13:09 (24996): Guest Log: Looking for outputfile HITS.46676269._028521.pool.root.1
2025-10-10 08:13:09 (24996): Guest Log: HITS file was successfully produced
2025-10-10 08:13:09 (24996): Guest Log: -rw-------. 1 atlas atlas 196922625 Oct 10 15:14 /home/atlas/RunAtlas/HITS.46676269._028521.pool.root.1
2025-10-10 08:13:10 (24996): Guest Log: Successfully finished the ATLAS job!
2025-10-10 08:13:10 (24996): Guest Log: Copying the results back to the shared directory!
2025-10-10 08:13:10 (24996): Guest Log:  *** Contents of shared directory: ***
2025-10-10 08:13:10 (24996): Guest Log: total 407840
2025-10-10 08:13:10 (24996): Guest Log: -rwxrwxrwx. 1 root root 219247991 Oct 10 06:23 ATLAS.root_0
2025-10-10 08:13:10 (24996): Guest Log: -rwxrwxrwx. 1 root root 196922625 Oct 10 15:13 HITS.pool.root.1
2025-10-10 08:13:10 (24996): Guest Log: -rwxrwxrwx. 1 root root      8956 Oct 10 06:23 init_data.xml
2025-10-10 08:13:10 (24996): Guest Log: -rwxrwxrwx. 1 root root    569671 Oct 10 05:27 input.tar.gz
2025-10-10 08:13:10 (24996): Guest Log: -rwxrwxrwx. 1 root root    849920 Oct 10 15:13 result.tar.gz
2025-10-10 08:13:10 (24996): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 10 05:26 start_atlas.sh
2025-10-10 08:13:10 (24996): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-10 08:13:10 (24996): VM Completion File Detected.
2025-10-10 08:13:10 (24996): Powering off VM.
2025-10-10 08:13:11 (24996): Successfully stopped VM.
2025-10-10 08:13:11 (24996): Deregistering VM. (boinc_758264bb7e017e71, slot#1)
2025-10-10 08:13:11 (24996): Removing network bandwidth throttle group from VM.
2025-10-10 08:13:11 (24996): Removing VM from VirtualBox.
2025-10-10 08:13:16 (24996): called boinc_finish(0)

</stderr_txt>
]]>

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