Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
04:12:45 (1184649): wrapper (7.7.26015): starting
04:12:45 (1184649): wrapper: running run_atlas (--nthreads 2)
[2025-10-12 04:12:45] Arguments: --nthreads 2
[2025-10-12 04:12:45] Threads: 2
[2025-10-12 04:12:45] Checking for CVMFS
[2025-10-12 04:12:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 04:12:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 04:12:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 04:12:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 04:12:46] 2.13.2.0 4114 8333 102052 151603 2 57 7375119 10240000 0 130560 0 2785410 99.980 289292 133 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
[2025-10-12 04:12:46] CVMFS is ok
[2025-10-12 04:12:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 04:12:46] Checking for apptainer binary...
[2025-10-12 04:12:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 04:12:46] Running /usr/bin/apptainer --version
[2025-10-12 04:12:46] apptainer version 1.4.2-1.el9
[2025-10-12 04:12:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 04:12:46] ahanllin02
[2025-10-12 04:12:46] apptainer works
[2025-10-12 04:12:46] Set ATHENA_PROC_NUMBER=2
[2025-10-12 04:12:46] Set ATHENA_CORE_NUMBER=2
[2025-10-12 04:12:46] Starting ATLAS job with PandaID=6837376946
[2025-10-12 04:12:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:45:35]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:45:35] 2025-10-12 08:44:42,724 | INFO     | time since job start (23509s) is within the limit (172800.0s)
[2025-10-12 10:45:35] 2025-10-12 08:44:42,988 | INFO     | monitor loop #1769: job 0:6837376946 is in state 'finished'
[2025-10-12 10:45:35] 2025-10-12 08:44:42,988 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:45:35] 2025-10-12 08:44:44,035 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 10:45:35] 2025-10-12 08:44:44,036 | INFO     | found 2 cores (2 cores per socket, 1 socket) HT, CPU MHz: 2547.26975
[2025-10-12 10:45:35] 2025-10-12 08:44:44,037 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6837376946/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 10:45:35] 2025-10-12 08:44:44,037 | INFO     | extracted standard info from prmon json
[2025-10-12 10:45:35] 2025-10-12 08:44:44,037 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 10:45:35] 2025-10-12 08:44:44,037 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 10:45:35] 2025-10-12 08:44:44,038 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 10:45:35] 2025-10-12 08:44:44,038 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 10:45:35] 2025-10-12 08:44:44,043 | INFO     | fitting pss+swap vs Time
[2025-10-12 10:45:35] 2025-10-12 08:44:44,043 | INFO     | sum of square deviations: 17695289920.0
[2025-10-12 10:45:35] 2025-10-12 08:44:44,046 | INFO     | sum of deviations: -16877541304.999973
[2025-10-12 10:45:35] 2025-10-12 08:44:44,046 | INFO     | mean x: 1760246907.0
[2025-10-12 10:45:35] 2025-10-12 08:44:44,046 | INFO     | mean y: 2308841.3714285716
[2025-10-12 10:45:35] 2025-10-12 08:44:44,046 | INFO     | -- intersect: 1681209837.8627563
[2025-10-12 10:45:35] 2025-10-12 08:44:44,047 | INFO     | intersect: 1681209837.8627563
[2025-10-12 10:45:35] 2025-10-12 08:44:44,047 | INFO     | chi2: 1.1909096885329185
[2025-10-12 10:45:35] 2025-10-12 08:44:44,047 | INFO     | sum of square deviations: 17014774835.0
[2025-10-12 10:45:35] 2025-10-12 08:44:44,050 | INFO     | sum of deviations: -16581700363.499994
[2025-10-12 10:45:35] 2025-10-12 08:44:44,050 | INFO     | mean x: 1760246754.5
[2025-10-12 10:45:35] 2025-10-12 08:44:44,051 | INFO     | mean y: 2308907.6710526315
[2025-10-12 10:45:35] 2025-10-12 08:44:44,051 | INFO     | -- intersect: 1717752369.7203896
[2025-10-12 10:45:35] 2025-10-12 08:44:44,051 | INFO     | intersect: 1717752369.7203896
[2025-10-12 10:45:35] 2025-10-12 08:44:44,051 | INFO     | chi2: 1.19071484348198
[2025-10-12 10:45:35] 2025-10-12 08:44:44,051 | INFO     | current chi2=1.19071484348198 (change=0.01636102660130285 %)
[2025-10-12 10:45:35] 2025-10-12 08:44:44,051 | INFO     | right removable region: 379
[2025-10-12 10:45:35] 2025-10-12 08:44:44,052 | INFO     | sum of square deviations: 17014774835.0
[2025-10-12 10:45:35] 2025-10-12 08:44:44,055 | INFO     | sum of deviations: -54523998043.499985
[2025-10-12 10:45:35] 2025-10-12 08:44:44,055 | INFO     | mean x: 1760247059.5
[2025-10-12 10:45:35] 2025-10-12 08:44:44,055 | INFO     | mean y: 2317209.2289473685
[2025-10-12 10:45:35] 2025-10-12 08:44:44,055 | INFO     | -- intersect: 5643044645.176506
[2025-10-12 10:45:35] 2025-10-12 08:44:44,055 | INFO     | intersect: 5643044645.176506
[2025-10-12 10:45:35] 2025-10-12 08:44:44,056 | INFO     | chi2: 0.09498564461189389
[2025-10-12 10:45:35] 2025-10-12 08:44:44,056 | INFO     | current chi2=0.09498564461189389 (change=92.0241101801005 %)
[2025-10-12 10:45:35] 2025-10-12 08:44:44,056 | INFO     | sum of square deviations: 16351934500.0
[2025-10-12 10:45:35] 2025-10-12 08:44:44,059 | INFO     | sum of deviations: -52320344464.999985
[2025-10-12 10:45:35] 2025-10-12 08:44:44,059 | INFO     | mean x: 1760247212.0
[2025-10-12 10:45:35] 2025-10-12 08:44:44,059 | INFO     | mean y: 2316699.112
[2025-10-12 10:45:35] 2025-10-12 08:44:44,059 | INFO     | -- intersect: 5634478476.386478
[2025-10-12 10:45:35] 2025-10-12 08:44:44,059 | INFO     | intersect: 5634478476.386478
[2025-10-12 10:45:35] 2025-10-12 08:44:44,060 | INFO     | chi2: 0.09390062775566424
[2025-10-12 10:45:35] 2025-10-12 08:44:44,060 | INFO     | current chi2=0.09390062775566424 (change=1.1422956181041566 %)
[2025-10-12 10:45:35] 2025-10-12 08:44:44,060 | INFO     | left removable region: 20
[2025-10-12 10:45:35] 2025-10-12 08:44:44,060 | INFO     | sum of square deviations: 14346910860.0
[2025-10-12 10:45:35] 2025-10-12 08:44:44,063 | INFO     | sum of deviations: -42314302124.00001
[2025-10-12 10:45:35] 2025-10-12 08:44:44,063 | INFO     | mean x: 1760247334.0
[2025-10-12 10:45:35] 2025-10-12 08:44:44,063 | INFO     | mean y: 2314649.437325905
[2025-10-12 10:45:35] 2025-10-12 08:44:44,063 | INFO     | -- intersect: 5193929641.03152
[2025-10-12 10:45:35] 2025-10-12 08:44:44,063 | INFO     | intersect: 5193929641.03152
[2025-10-12 10:45:35] 2025-10-12 08:44:44,064 | INFO     | chi2: 0.08930124031720613
[2025-10-12 10:45:35] 2025-10-12 08:44:44,064 | INFO     | -- intersect: 5193929641.03152
[2025-10-12 10:45:35] 2025-10-12 08:44:44,064 | INFO     | current memory leak: -2.95 B/s (using 359 data points, chi2=0.09)
[2025-10-12 10:45:35] 2025-10-12 08:44:44,064 | INFO     | could have reported an average CPU frequency of 2497 MHz (16 samples)
[2025-10-12 10:45:35] 2025-10-12 08:44:44,064 | INFO     | ..............................
[2025-10-12 10:45:35] 2025-10-12 08:44:44,064 | INFO     | . Timing measurements:
[2025-10-12 10:45:35] 2025-10-12 08:44:44,064 | INFO     | . get job = 0 s
[2025-10-12 10:45:35] 2025-10-12 08:44:44,064 | INFO     | . initial setup = 1 s
[2025-10-12 10:45:35] 2025-10-12 08:44:44,065 | INFO     | . payload setup = 3 s
[2025-10-12 10:45:35] 2025-10-12 08:44:44,065 | INFO     | . stage-in = 0 s
[2025-10-12 10:45:35] 2025-10-12 08:44:44,065 | INFO     | . payload execution = 23478 s
[2025-10-12 10:45:35] 2025-10-12 08:44:44,065 | INFO     | . stage-out = 0 s
[2025-10-12 10:45:35] 2025-10-12 08:44:44,065 | INFO     | . log creation = 0 s
[2025-10-12 10:45:35] 2025-10-12 08:44:44,065 | INFO     | ..............................
[2025-10-12 10:45:35] 2025-10-12 08:44:44,134 | INFO     | 
[2025-10-12 10:45:35] 2025-10-12 08:44:44,134 | INFO     | job summary report
[2025-10-12 10:45:35] 2025-10-12 08:44:44,134 | INFO     | --------------------------------------------------
[2025-10-12 10:45:35] 2025-10-12 08:44:44,134 | INFO     | PanDA job id: 6837376946
[2025-10-12 10:45:35] 2025-10-12 08:44:44,135 | INFO     | task id: 46676269
[2025-10-12 10:45:35] 2025-10-12 08:44:44,135 | INFO     | errors: (none)
[2025-10-12 10:45:35] 2025-10-12 08:44:44,135 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:45:35] 2025-10-12 08:44:44,135 | INFO     | pilot state: finished 
[2025-10-12 10:45:35] 2025-10-12 08:44:44,135 | INFO     | transexitcode: 0
[2025-10-12 10:45:35] 2025-10-12 08:44:44,135 | INFO     | exeerrorcode: 0
[2025-10-12 10:45:35] 2025-10-12 08:44:44,135 | INFO     | exeerrordiag: 
[2025-10-12 10:45:35] 2025-10-12 08:44:44,135 | INFO     | exitcode: 0
[2025-10-12 10:45:35] 2025-10-12 08:44:44,135 | INFO     | exitmsg: OK
[2025-10-12 10:45:35] 2025-10-12 08:44:44,135 | INFO     | cpuconsumptiontime: 46415 s
[2025-10-12 10:45:35] 2025-10-12 08:44:44,136 | INFO     | nevents: 400
[2025-10-12 10:45:35] 2025-10-12 08:44:44,136 | INFO     | neventsw: 0
[2025-10-12 10:45:35] 2025-10-12 08:44:44,136 | INFO     | pid: 1194702
[2025-10-12 10:45:35] 2025-10-12 08:44:44,136 | INFO     | pgrp: 1194702
[2025-10-12 10:45:35] 2025-10-12 08:44:44,136 | INFO     | corecount: 2
[2025-10-12 10:45:35] 2025-10-12 08:44:44,136 | INFO     | event service: False
[2025-10-12 10:45:35] 2025-10-12 08:44:44,136 | INFO     | sizes: {0: 2348633, 1: 2348832, 3: 2349094, 11: 2349122, 23486: 2384271, 23487: 2393269, 23489: 2393453, 23497: 2393647}
[2025-10-12 10:45:35] 2025-10-12 08:44:44,136 | INFO     | --------------------------------------------------
[2025-10-12 10:45:35] 2025-10-12 08:44:44,136 | INFO     | 
[2025-10-12 10:45:35] 2025-10-12 08:44:44,136 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-12 10:45:35] 2025-10-12 08:44:44,148 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:45:35] 2025-10-12 08:44:44,148 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:45:35] 2025-10-12 08:44:44,148 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:45:35] 2025-10-12 08:44:44,149 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:45:35] 2025-10-12 08:44:44,149 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:45:35] 2025-10-12 08:44:44,149 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:45:35] 2025-10-12 08:44:44,149 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:45:35] 2025-10-12 08:44:44,149 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:45:35] 2025-10-12 08:44:44,149 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:45:35] 2025-10-12 08:44:44,149 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:45:35] 2025-10-12 08:44:44,149 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:45:35] 2025-10-12 08:44:44,149 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:45:35] 2025-10-12 08:44:44,149 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:45:35] 2025-10-12 08:44:44,150 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:45:35] 2025-10-12 08:44:44,150 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:45:35] 2025-10-12 08:44:44,150 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:45:35] 2025-10-12 08:44:44,150 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:45:35] 2025-10-12 08:44:44,150 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:45:35] 2025-10-12 08:44:44,150 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:45:35] 2025-10-12 08:44:44,150 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:45:35] 2025-10-12 08:44:44,150 | INFO     | job 6837376946 has completed (purged errors)
[2025-10-12 10:45:35] 2025-10-12 08:44:44,150 | INFO     | overall cleanup function is called
[2025-10-12 10:45:35] 2025-10-12 08:44:45,156 | INFO     | --- collectZombieJob: --- 10, [1194702]
[2025-10-12 10:45:35] 2025-10-12 08:44:45,156 | INFO     | zombie collector waiting for pid 1194702
[2025-10-12 10:45:35] 2025-10-12 08:44:45,157 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:45:35] 2025-10-12 08:44:45,157 | INFO     | collected zombie processes
[2025-10-12 10:45:35] 2025-10-12 08:44:45,157 | INFO     | will attempt to kill all subprocesses of pid=1194702
[2025-10-12 10:45:35] 2025-10-12 08:44:45,212 | INFO     | process IDs to be killed: [1194702] (in reverse order)
[2025-10-12 10:45:35] 2025-10-12 08:44:45,237 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:45:35] 2025-10-12 08:44:45,238 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:45:35] 2025-10-12 08:44:45,240 | INFO     | did not find any defunct processes belonging to 1194702
[2025-10-12 10:45:35] 2025-10-12 08:44:45,241 | INFO     | did not find any defunct processes belonging to 1194702
[2025-10-12 10:45:35] 2025-10-12 08:44:45,242 | INFO     | ready for new job
[2025-10-12 10:45:35] 2025-10-12 08:44:45,242 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:45:35] 2025-10-12 08:44:45,243 | INFO     | ***************************************
[2025-10-12 10:45:35] 2025-10-12 08:44:45,243 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-12 10:45:35] 2025-10-12 08:44:45,243 | INFO     | ***************************************
[2025-10-12 10:45:35] 2025-10-12 08:44:45,244 | INFO     | 
[2025-10-12 10:45:35] 2025-10-12 08:44:45,244 | INFO     | architecture information:
[2025-10-12 10:45:35] 2025-10-12 08:44:45,244 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:45:35] 2025-10-12 08:44:45,253 | INFO     | cat /etc/os-release:
[2025-10-12 10:45:35] NAME="CentOS Linux"
[2025-10-12 10:45:35] VERSION="7 (Core)"
[2025-10-12 10:45:35] ID="centos"
[2025-10-12 10:45:35] ID_LIKE="rhel fedora"
[2025-10-12 10:45:35] VERSION_ID="7"
[2025-10-12 10:45:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:45:35] ANSI_COLOR="0;31"
[2025-10-12 10:45:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:45:35] HOME_URL="https://www.centos.org/"
[2025-10-12 10:45:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:45:35] 
[2025-10-12 10:45:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:45:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:45:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:45:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:45:35] 
[2025-10-12 10:45:35] 2025-10-12 08:44:45,253 | INFO     | ***************************************
[2025-10-12 10:45:35] 2025-10-12 08:44:45,756 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-12 10:45:35] 2025-10-12 08:44:45,767 | INFO     | sufficient remaining disk space (469670821888 B)
[2025-10-12 10:45:35] 2025-10-12 08:44:45,767 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:45:35] 2025-10-12 08:44:45,767 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:45:35] 2025-10-12 08:44:45,768 | INFO     | update_server=False
[2025-10-12 10:45:35] 2025-10-12 08:44:45,768 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:45:35] 2025-10-12 08:44:45,768 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:45:35] 2025-10-12 08:44:45,768 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:45:35] 2025-10-12 08:44:46,463 | INFO     | all payload control threads have been joined
[2025-10-12 10:45:35] 2025-10-12 08:44:46,497 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:45:35] 2025-10-12 08:44:46,497 | INFO     | aborting loop
[2025-10-12 10:45:35] 2025-10-12 08:44:46,732 | INFO     | all data control threads have been joined
[2025-10-12 10:45:35] 2025-10-12 08:44:46,773 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:45:35] 2025-10-12 08:44:46,774 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:45:35] 2025-10-12 08:44:46,792 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:45:35] 2025-10-12 08:44:46,890 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:45:35] 2025-10-12 08:44:47,053 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:45:35] 2025-10-12 08:44:47,066 | INFO     | all job control threads have been joined
[2025-10-12 10:45:35] 2025-10-12 08:44:47,469 | INFO     | [payload] control thread has finished
[2025-10-12 10:45:35] 2025-10-12 08:44:47,502 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:45:35] 2025-10-12 08:44:47,503 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:45:35] 2025-10-12 08:44:47,738 | INFO     | [data] control thread has finished
[2025-10-12 10:45:35] 2025-10-12 08:44:47,770 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:45:35] 2025-10-12 08:44:48,070 | INFO     | [job] control thread has finished
[2025-10-12 10:45:35] 2025-10-12 08:44:48,104 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:45:35] 2025-10-12 08:44:48,147 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:45:35] 2025-10-12 08:44:48,152 | INFO     | [job] validate thread has finished
[2025-10-12 10:45:35] 2025-10-12 08:44:48,222 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:45:35] 2025-10-12 08:44:50,896 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:45:35] 2025-10-12 08:44:56,513 | INFO     | job.realtimelogging is not enabled
[2025-10-12 10:45:35] 2025-10-12 08:44:57,519 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:45:35] 2025-10-12 08:45:15,899 | INFO     | PID=1188334 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 10:45:35] 2025-10-12 08:45:15,900 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:45:35] 2025-10-12 08:45:15,900 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:45:35] 2025-10-12 08:45:15,900 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:45:35] 2025-10-12 08:45:29,570 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:45:35] 2025-10-12 08:45:29,945 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139655222916928)>', '<ExcThread(monitor, started 139654728763136)>']
[2025-10-12 10:45:35] 2025-10-12 08:45:29,972 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:45:35] 2025-10-12 08:45:29,972 | INFO     | [monitor] control thread has ended
[2025-10-12 10:45:35] 2025-10-12 08:45:34,971 | INFO     | all workflow threads have been joined
[2025-10-12 10:45:35] 2025-10-12 08:45:34,971 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:45:35] 2025-10-12 08:45:34,971 | INFO     | traces error code: 0
[2025-10-12 10:45:35] 2025-10-12 08:45:34,972 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:45:35] 2025-10-12 08:45:35,055 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:45:35] 2025-10-12 08:45:35,057 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:45:35] 2025-10-12 08:45:35,058 [wrapper] pilotpid: 1188334
[2025-10-12 10:45:35] 2025-10-12 08:45:35,060 [wrapper] Pilot exit status: 0
[2025-10-12 10:45:35] 2025-10-12 08:45:35,068 [wrapper] pandaids: 6837376946
[2025-10-12 10:45:35] 2025-10-12 08:45:35,084 [wrapper] cleanup supervisor_pilot 1234056 1188335
[2025-10-12 10:45:35] 2025-10-12 08:45:35,086 [wrapper] Test setup, not cleaning
[2025-10-12 10:45:35] 2025-10-12 08:45:35,089 [wrapper] apfmon messages muted
[2025-10-12 10:45:35] 2025-10-12 08:45:35,091 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:45:35] 2025-10-12 08:45:35,092 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:45:35]  *** Error codes and diagnostics ***
[2025-10-12 10:45:35]     "exeErrorCode": 0,
[2025-10-12 10:45:35]     "exeErrorDiag": "",
[2025-10-12 10:45:35]     "pilotErrorCode": 0,
[2025-10-12 10:45:35]     "pilotErrorDiag": "",
[2025-10-12 10:45:35]  *** Listing of results directory ***
[2025-10-12 10:45:35] total 421064
[2025-10-12 10:45:35] -rw-r--r-- 1 boinc boinc    563267 Oct  7 09:02 pilot3.tar.gz
[2025-10-12 10:45:35] -rwx------ 1 boinc boinc     36292 Oct 10 02:14 runpilot2-wrapper.sh
[2025-10-12 10:45:35] -rw-r--r-- 1 boinc boinc      5112 Oct 10 02:14 queuedata.json
[2025-10-12 10:45:35] -rw-r--r-- 1 boinc boinc       100 Oct 12 04:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:45:35] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 04:12 run_atlas
[2025-10-12 10:45:35] -rw-r--r-- 1 boinc boinc       105 Oct 12 04:12 job.xml
[2025-10-12 10:45:35] -rw-r--r-- 2 boinc boinc 222583758 Oct 12 04:12 EVNT.46676267._001013.pool.root.1
[2025-10-12 10:45:35] -rw-r--r-- 2 boinc boinc     15120 Oct 12 04:12 start_atlas.sh
[2025-10-12 10:45:35] drwxrwx--x 2 boinc boinc        68 Oct 12 04:12 shared
[2025-10-12 10:45:35] -rw-r--r-- 2 boinc boinc    576710 Oct 12 04:12 input.tar.gz
[2025-10-12 10:45:35] -rw-r--r-- 1 boinc boinc      6488 Oct 12 04:12 init_data.xml
[2025-10-12 10:45:35] -rw-r--r-- 1 boinc boinc         0 Oct 12 04:12 boinc_setup_complete
[2025-10-12 10:45:35] -rw-r--r-- 1 boinc boinc         0 Oct 12 04:12 boinc_lockfile
[2025-10-12 10:45:35] -rw-r--r-- 1 boinc boinc      2548 Oct 12 04:12 pandaJob.out
[2025-10-12 10:45:35] -rw------- 1 boinc boinc    975496 Oct 12 04:12 agis_schedconf.cvmfs.json
[2025-10-12 10:45:35] drwx------ 4 boinc boinc      4096 Oct 12 04:12 pilot3
[2025-10-12 10:45:35] -rw------- 1 boinc boinc 197208902 Oct 12 10:44 HITS.46676269._028708.pool.root.1
[2025-10-12 10:45:35] -rw-r--r-- 1 boinc boinc       530 Oct 12 10:44 boinc_task_state.xml
[2025-10-12 10:45:35] -rw------- 1 boinc boinc      1017 Oct 12 10:44 memory_monitor_summary.json
[2025-10-12 10:45:35] -rw------- 1 boinc boinc   1560580 Oct 12 10:44 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:45:35] -rw------- 1 boinc boinc    496996 Oct 12 10:44 log.46676269._028708.job.log.tgz.1
[2025-10-12 10:45:35] -rw------- 1 boinc boinc      7768 Oct 12 10:44 heartbeat.json
[2025-10-12 10:45:35] -rw------- 1 boinc boinc        95 Oct 12 10:45 pilot_heartbeat.json
[2025-10-12 10:45:35] -rw-r--r-- 1 boinc boinc      8192 Oct 12 10:45 boinc_mmap_file
[2025-10-12 10:45:35] -rw-r--r-- 1 boinc boinc        28 Oct 12 10:45 wrapper_checkpoint.txt
[2025-10-12 10:45:35] -rw------- 1 boinc boinc      4821 Oct 12 10:45 pilotlog.txt
[2025-10-12 10:45:35] -rw------- 1 boinc boinc   3237635 Oct 12 10:45 log.46676269._028708.job.log.1
[2025-10-12 10:45:35] -rw------- 1 boinc boinc       357 Oct 12 10:45 output.list
[2025-10-12 10:45:35] -rw-r--r-- 1 boinc boinc       620 Oct 12 10:45 runtime_log
[2025-10-12 10:45:35] -rw------- 1 boinc boinc   3758080 Oct 12 10:45 result.tar.gz
[2025-10-12 10:45:35] -rw-r--r-- 1 boinc boinc      8685 Oct 12 10:45 runtime_log.err
[2025-10-12 10:45:35] -rw------- 1 boinc boinc       653 Oct 12 10:45 G6tMDmixFR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmhyOMDmtAqqCn.diag
[2025-10-12 10:45:35] -rw-r--r-- 1 boinc boinc     20811 Oct 12 10:45 stderr.txt
[2025-10-12 10:45:35] HITS file was successfully produced:
[2025-10-12 10:45:35] -rw------- 1 boinc boinc 197208902 Oct 12 10:44 shared/HITS.pool.root.1
[2025-10-12 10:45:35]  *** Contents of shared directory: ***
[2025-10-12 10:45:35] total 414208
[2025-10-12 10:45:35] -rw-r--r-- 2 boinc boinc 222583758 Oct 12 04:12 ATLAS.root_0
[2025-10-12 10:45:35] -rw-r--r-- 2 boinc boinc     15120 Oct 12 04:12 start_atlas.sh
[2025-10-12 10:45:35] -rw-r--r-- 2 boinc boinc    576710 Oct 12 04:12 input.tar.gz
[2025-10-12 10:45:35] -rw------- 1 boinc boinc 197208902 Oct 12 10:44 HITS.pool.root.1
[2025-10-12 10:45:35] -rw------- 1 boinc boinc   3758080 Oct 12 10:45 result.tar.gz
10:45:36 (1184649): run_atlas exited; CPU time 46773.465445
10:45:36 (1184649): called boinc_finish(0)

</stderr_txt>
]]>

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