Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:52:34 (2683822): wrapper (7.7.26015): starting
13:52:34 (2683822): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 13:52:34] Arguments: --nthreads 12
[2025-10-10 13:52:34] Threads: 12
[2025-10-10 13:52:34] Checking for CVMFS
[2025-10-10 13:52:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 13:52:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 13:52:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 13:52:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 13:52:34] 2.13.2.0 3361836 1638 129972 151556 3 176 20750060 32935936 21548 16776704 0 4297923 99.785 2998850 33842 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 13:52:34] CVMFS is ok
[2025-10-10 13:52:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 13:52:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 13:52:34] Further information can be found at the LHC@home message board.
[2025-10-10 13:52:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 13:52:34] Checking for apptainer binary...
[2025-10-10 13:52:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 13:52:34] Running /usr/bin/apptainer --version
[2025-10-10 13:52:34] apptainer version 1.4.3-1.el9
[2025-10-10 13:52:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 13:52:34] c-8-14.aglt2.org
[2025-10-10 13:52:34] apptainer works
[2025-10-10 13:52:34] Set ATHENA_PROC_NUMBER=12
[2025-10-10 13:52:34] Set ATHENA_CORE_NUMBER=12
[2025-10-10 13:52:34] Starting ATLAS job with PandaID=6837376060
[2025-10-10 13:52:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:27:58 (3247701): wrapper (7.7.26015): starting
17:27:58 (3247701): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 17:27:58] Arguments: --nthreads 8
[2025-10-10 17:27:58] Threads: 8
[2025-10-10 17:27:58] This job has been restarted, cleaning up previous attempt
[2025-10-10 17:27:58] Checking for CVMFS
[2025-10-10 17:27:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 17:27:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 17:27:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 17:28:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 17:28:00] 2.13.2.0 3361836 1853 129316 151562 0 17 22021601 32935937 23489 16776704 0 4721029 99.797 3043612 33795 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 17:28:00] CVMFS is ok
[2025-10-10 17:28:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 17:28:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 17:28:00] Further information can be found at the LHC@home message board.
[2025-10-10 17:28:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 17:28:00] Checking for apptainer binary...
[2025-10-10 17:28:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 17:28:00] Running /usr/bin/apptainer --version
[2025-10-10 17:28:00] apptainer version 1.4.3-1.el9
[2025-10-10 17:28:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 17:28:00] c-8-14.aglt2.org
[2025-10-10 17:28:00] apptainer works
[2025-10-10 17:28:00] Set ATHENA_PROC_NUMBER=8
[2025-10-10 17:28:00] Set ATHENA_CORE_NUMBER=8
[2025-10-10 17:28:00] Starting ATLAS job with PandaID=6837376060
[2025-10-10 17:28:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 05:31:01]  *** The last 200 lines of the pilot log: ***
[2025-10-11 05:31:02] 2025-10-11 08:08:58,994 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 05:31:02] 2025-10-11 08:08:59,022 | INFO     | fitting pss+swap vs Time
[2025-10-11 05:31:02] 2025-10-11 08:08:59,023 | INFO     | sum of square deviations: 76798771358.07643
[2025-10-11 05:31:02] 2025-10-11 08:08:59,056 | INFO     | sum of deviations: -167295765595.11472
[2025-10-11 05:31:02] 2025-10-11 08:08:59,056 | INFO     | mean x: 1760150913.1592357
[2025-10-11 05:31:02] 2025-10-11 08:08:59,057 | INFO     | mean y: 2059299.0111464967
[2025-10-11 05:31:02] 2025-10-11 08:08:59,057 | INFO     | -- intersect: 3836310672.733775
[2025-10-11 05:31:02] 2025-10-11 08:08:59,057 | INFO     | intersect: 3836310672.733775
[2025-10-11 05:31:02] 2025-10-11 08:08:59,058 | INFO     | chi2: 4.127420105630433
[2025-10-11 05:31:02] 2025-10-11 08:08:59,059 | INFO     | sum of square deviations: 74979086760.88599
[2025-10-11 05:31:02] 2025-10-11 08:08:59,084 | INFO     | sum of deviations: -84177928910.48326
[2025-10-11 05:31:02] 2025-10-11 08:08:59,084 | INFO     | mean x: 1760150760.6645265
[2025-10-11 05:31:02] 2025-10-11 08:08:59,094 | INFO     | mean y: 2066244.8876404495
[2025-10-11 05:31:02] 2025-10-11 08:08:59,094 | INFO     | -- intersect: 1978161873.7323034
[2025-10-11 05:31:02] 2025-10-11 08:08:59,094 | INFO     | intersect: 1978161873.7323034
[2025-10-11 05:31:02] 2025-10-11 08:08:59,095 | INFO     | chi2: 2.7506752233208402
[2025-10-11 05:31:02] 2025-10-11 08:08:59,095 | INFO     | current chi2=2.7506752233208402 (change=33.35606376563175 %)
[2025-10-11 05:31:02] 2025-10-11 08:08:59,096 | INFO     | sum of square deviations: 73188303323.83345
[2025-10-11 05:31:02] 2025-10-11 08:08:59,131 | INFO     | sum of deviations: -66159919456.83325
[2025-10-11 05:31:02] 2025-10-11 08:08:59,132 | INFO     | mean x: 1760150608.1666667
[2025-10-11 05:31:02] 2025-10-11 08:08:59,132 | INFO     | mean y: 2067781.6197411004
[2025-10-11 05:31:02] 2025-10-11 08:08:59,132 | INFO     | -- intersect: 1593188455.0003583
[2025-10-11 05:31:02] 2025-10-11 08:08:59,132 | INFO     | intersect: 1593188455.0003583
[2025-10-11 05:31:02] 2025-10-11 08:08:59,133 | INFO     | chi2: 2.713532282416402
[2025-10-11 05:31:02] 2025-10-11 08:08:59,133 | INFO     | current chi2=2.713532282416402 (change=1.3503208444796382 %)
[2025-10-11 05:31:02] 2025-10-11 08:08:59,133 | INFO     | right removable region: 617
[2025-10-11 05:31:02] 2025-10-11 08:08:59,134 | INFO     | sum of square deviations: 74978834220.8862
[2025-10-11 05:31:02] 2025-10-11 08:08:59,170 | INFO     | sum of deviations: -275804979175.6484
[2025-10-11 05:31:02] 2025-10-11 08:08:59,170 | INFO     | mean x: 1760151065.6645265
[2025-10-11 05:31:02] 2025-10-11 08:08:59,170 | INFO     | mean y: 2068374.5136436597
[2025-10-11 05:31:02] 2025-10-11 08:08:59,170 | INFO     | -- intersect: 6476674615.809005
[2025-10-11 05:31:02] 2025-10-11 08:08:59,179 | INFO     | intersect: 6476674615.809005
[2025-10-11 05:31:02] 2025-10-11 08:08:59,180 | INFO     | chi2: 2.228270403979228
[2025-10-11 05:31:02] 2025-10-11 08:08:59,180 | INFO     | current chi2=2.228270403979228 (change=46.012997297282 %)
[2025-10-11 05:31:02] 2025-10-11 08:08:59,181 | INFO     | sum of square deviations: 73187912130.49844
[2025-10-11 05:31:02] 2025-10-11 08:08:59,208 | INFO     | sum of deviations: -297611782092.47253
[2025-10-11 05:31:02] 2025-10-11 08:08:59,208 | INFO     | mean x: 1760151218.168285
[2025-10-11 05:31:02] 2025-10-11 08:08:59,208 | INFO     | mean y: 2070225.139158576
[2025-10-11 05:31:02] 2025-10-11 08:08:59,208 | INFO     | -- intersect: 7159560110.316623
[2025-10-11 05:31:02] 2025-10-11 08:08:59,209 | INFO     | intersect: 7159560110.316623
[2025-10-11 05:31:02] 2025-10-11 08:08:59,209 | INFO     | chi2: 2.091027571508784
[2025-10-11 05:31:02] 2025-10-11 08:08:59,218 | INFO     | current chi2=2.091027571508784 (change=6.1591641761860245 %)
[2025-10-11 05:31:02] 2025-10-11 08:08:59,218 | INFO     | left removable region: 20
[2025-10-11 05:31:02] 2025-10-11 08:08:59,223 | INFO     | sum of square deviations: 65977731184.606445
[2025-10-11 05:31:02] 2025-10-11 08:08:59,244 | INFO     | sum of deviations: -177575902303.2129
[2025-10-11 05:31:02] 2025-10-11 08:08:59,244 | INFO     | mean x: 1760151187.6767168
[2025-10-11 05:31:02] 2025-10-11 08:08:59,244 | INFO     | mean y: 2078113.6465661642
[2025-10-11 05:31:02] 2025-10-11 08:08:59,244 | INFO     | -- intersect: 4739440701.444821
[2025-10-11 05:31:02] 2025-10-11 08:08:59,245 | INFO     | intersect: 4739440701.444821
[2025-10-11 05:31:02] 2025-10-11 08:08:59,245 | INFO     | chi2: 0.6601961119200945
[2025-10-11 05:31:02] 2025-10-11 08:08:59,254 | INFO     | -- intersect: 4739440701.444821
[2025-10-11 05:31:02] 2025-10-11 08:08:59,254 | INFO     | current memory leak: -2.69 B/s (using 597 data points, chi2=0.66)
[2025-10-11 05:31:02] 2025-10-11 08:08:59,258 | INFO     | could have reported an average CPU frequency of 2600 MHz (24 samples)
[2025-10-11 05:31:02] 2025-10-11 08:08:59,258 | INFO     | ..............................
[2025-10-11 05:31:02] 2025-10-11 08:08:59,258 | INFO     | . Timing measurements:
[2025-10-11 05:31:02] 2025-10-11 08:08:59,259 | INFO     | . get job = 0 s
[2025-10-11 05:31:02] 2025-10-11 08:08:59,259 | INFO     | . initial setup = 5 s
[2025-10-11 05:31:02] 2025-10-11 08:08:59,259 | INFO     | . payload setup = 16 s
[2025-10-11 05:31:02] 2025-10-11 08:08:59,259 | INFO     | . stage-in = 0 s
[2025-10-11 05:31:02] 2025-10-11 08:08:59,259 | INFO     | . payload execution = 38299 s
[2025-10-11 05:31:02] 2025-10-11 08:08:59,259 | INFO     | . stage-out = 13 s
[2025-10-11 05:31:02] 2025-10-11 08:08:59,259 | INFO     | . log creation = 3 s
[2025-10-11 05:31:02] 2025-10-11 08:08:59,259 | INFO     | ..............................
[2025-10-11 05:31:02] 2025-10-11 08:08:59,602 | INFO     | 
[2025-10-11 05:31:02] 2025-10-11 08:08:59,603 | INFO     | job summary report
[2025-10-11 05:31:02] 2025-10-11 08:08:59,603 | INFO     | --------------------------------------------------
[2025-10-11 05:31:02] 2025-10-11 08:08:59,603 | INFO     | PanDA job id: 6837376060
[2025-10-11 05:31:02] 2025-10-11 08:08:59,603 | INFO     | task id: 46676269
[2025-10-11 05:31:02] 2025-10-11 08:08:59,603 | INFO     | errors: (none)
[2025-10-11 05:31:02] 2025-10-11 08:08:59,603 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 05:31:02] 2025-10-11 08:08:59,603 | INFO     | pilot state: finished 
[2025-10-11 05:31:02] 2025-10-11 08:08:59,603 | INFO     | transexitcode: 0
[2025-10-11 05:31:02] 2025-10-11 08:08:59,603 | INFO     | exeerrorcode: 0
[2025-10-11 05:31:02] 2025-10-11 08:08:59,604 | INFO     | exeerrordiag: 
[2025-10-11 05:31:02] 2025-10-11 08:08:59,604 | INFO     | exitcode: 0
[2025-10-11 05:31:02] 2025-10-11 08:08:59,604 | INFO     | exitmsg: OK
[2025-10-11 05:31:02] 2025-10-11 08:08:59,604 | INFO     | cpuconsumptiontime: 51987 s
[2025-10-11 05:31:02] 2025-10-11 08:08:59,604 | INFO     | nevents: 400
[2025-10-11 05:31:02] 2025-10-11 08:08:59,604 | INFO     | neventsw: 0
[2025-10-11 05:31:02] 2025-10-11 08:08:59,604 | INFO     | pid: 3269945
[2025-10-11 05:31:02] 2025-10-11 08:08:59,604 | INFO     | pgrp: 3269945
[2025-10-11 05:31:02] 2025-10-11 08:08:59,605 | INFO     | corecount: 8
[2025-10-11 05:31:02] 2025-10-11 08:08:59,605 | INFO     | event service: False
[2025-10-11 05:31:02] 2025-10-11 08:08:59,605 | INFO     | sizes: {0: 2348684, 1: 2348883, 12: 2348883, 14: 2349173, 23: 2349201, 38323: 2390003, 38325: 2390130, 38338: 2399184, 38343: 2399240, 38393: 2399434}
[2025-10-11 05:31:02] 2025-10-11 08:08:59,605 | INFO     | --------------------------------------------------
[2025-10-11 05:31:02] 2025-10-11 08:08:59,605 | INFO     | 
[2025-10-11 05:31:02] 2025-10-11 08:08:59,605 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 05:31:02] 2025-10-11 08:08:59,684 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 05:31:02] 2025-10-11 08:08:59,684 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 05:31:02] 2025-10-11 08:08:59,685 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 05:31:02] 2025-10-11 08:08:59,685 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 05:31:02] 2025-10-11 08:08:59,685 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 05:31:02] 2025-10-11 08:08:59,685 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 05:31:02] 2025-10-11 08:08:59,685 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 05:31:02] 2025-10-11 08:08:59,685 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 05:31:02] 2025-10-11 08:08:59,685 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 05:31:02] 2025-10-11 08:08:59,685 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 05:31:02] 2025-10-11 08:08:59,685 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 05:31:02] 2025-10-11 08:08:59,686 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 05:31:02] 2025-10-11 08:08:59,686 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 05:31:02] 2025-10-11 08:08:59,686 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 05:31:02] 2025-10-11 08:08:59,686 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 05:31:02] 2025-10-11 08:08:59,686 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 05:31:02] 2025-10-11 08:08:59,686 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 05:31:02] 2025-10-11 08:08:59,686 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 05:31:02] 2025-10-11 08:08:59,686 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 05:31:02] 2025-10-11 08:08:59,686 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 05:31:02] 2025-10-11 08:08:59,687 | INFO     | job 6837376060 has completed (purged errors)
[2025-10-11 05:31:02] 2025-10-11 08:08:59,687 | INFO     | overall cleanup function is called
[2025-10-11 05:31:02] 2025-10-11 08:09:00,714 | INFO     | --- collectZombieJob: --- 10, [3269945]
[2025-10-11 05:31:02] 2025-10-11 08:09:00,714 | INFO     | zombie collector waiting for pid 3269945
[2025-10-11 05:31:02] 2025-10-11 08:09:00,714 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 05:31:02] 2025-10-11 08:09:00,714 | INFO     | collected zombie processes
[2025-10-11 05:31:02] 2025-10-11 08:09:00,714 | INFO     | will attempt to kill all subprocesses of pid=3269945
[2025-10-11 05:31:02] 2025-10-11 08:09:06,218 | INFO     | process IDs to be killed: [3269945] (in reverse order)
[2025-10-11 05:31:02] 2025-10-11 08:09:06,576 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 05:31:02] 2025-10-11 08:09:06,576 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 05:31:02] 2025-10-11 08:09:06,605 | INFO     | did not find any defunct processes belonging to 3269945
[2025-10-11 05:31:02] 2025-10-11 08:09:06,640 | INFO     | did not find any defunct processes belonging to 3269945
[2025-10-11 05:31:02] 2025-10-11 08:09:06,641 | INFO     | ready for new job
[2025-10-11 05:31:02] 2025-10-11 08:09:06,641 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 05:31:02] 2025-10-11 08:09:06,648 | INFO     | ***************************************
[2025-10-11 05:31:02] 2025-10-11 08:09:06,648 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 05:31:02] 2025-10-11 08:09:06,648 | INFO     | ***************************************
[2025-10-11 05:31:02] 2025-10-11 08:09:06,648 | INFO     | 
[2025-10-11 05:31:02] 2025-10-11 08:09:06,664 | INFO     | architecture information:
[2025-10-11 05:31:02] 2025-10-11 08:09:06,669 | INFO     | executing command: cat /etc/os-release
[2025-10-11 05:31:02] 2025-10-11 08:09:06,898 | INFO     | cat /etc/os-release:
[2025-10-11 05:31:02] NAME="CentOS Linux"
[2025-10-11 05:31:02] VERSION="7 (Core)"
[2025-10-11 05:31:02] ID="centos"
[2025-10-11 05:31:02] ID_LIKE="rhel fedora"
[2025-10-11 05:31:02] VERSION_ID="7"
[2025-10-11 05:31:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 05:31:02] ANSI_COLOR="0;31"
[2025-10-11 05:31:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 05:31:02] HOME_URL="https://www.centos.org/"
[2025-10-11 05:31:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 05:31:02] 
[2025-10-11 05:31:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 05:31:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 05:31:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 05:31:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 05:31:02] 
[2025-10-11 05:31:02] 2025-10-11 08:09:06,898 | INFO     | ***************************************
[2025-10-11 05:31:02] 2025-10-11 08:09:07,403 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 05:31:02] 2025-10-11 08:09:07,508 | INFO     | sufficient remaining disk space (74630299648 B)
[2025-10-11 05:31:02] 2025-10-11 08:09:07,508 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 05:31:02] 2025-10-11 08:09:07,509 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 05:31:02] 2025-10-11 08:09:07,509 | INFO     | update_server=False
[2025-10-11 05:31:02] 2025-10-11 08:09:07,509 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 05:31:02] 2025-10-11 08:09:07,511 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 05:31:02] 2025-10-11 08:09:07,804 | INFO     | all payload control threads have been joined
[2025-10-11 05:31:02] 2025-10-11 08:09:07,977 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 05:31:02] 2025-10-11 08:09:07,977 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 05:31:02] 2025-10-11 08:09:08,101 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 05:31:02] 2025-10-11 08:09:08,101 | INFO     | will abort loop
[2025-10-11 05:31:02] 2025-10-11 08:09:08,169 | INFO     | all job control threads have been joined
[2025-10-11 05:31:02] 2025-10-11 08:09:08,461 | INFO     | all data control threads have been joined
[2025-10-11 05:31:02] 2025-10-11 08:09:08,517 | INFO     | [job] retrieve thread has finished
[2025-10-11 05:31:02] 2025-10-11 08:09:08,652 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 05:31:02] 2025-10-11 08:09:08,675 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 05:31:02] 2025-10-11 08:09:08,810 | INFO     | [payload] control thread has finished
[2025-10-11 05:31:02] 2025-10-11 08:09:08,811 | INFO     | [job] validate thread has finished
[2025-10-11 05:31:02] 2025-10-11 08:09:08,821 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 05:31:02] 2025-10-11 08:09:08,847 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 05:31:02] 2025-10-11 08:09:08,866 | INFO     | [data] copytool_in thread has finished
[2025-10-11 05:31:02] 2025-10-11 08:09:08,874 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 05:31:02] 2025-10-11 08:09:09,125 | INFO     | [payload] failed_post thread has finished
[2025-10-11 05:31:02] 2025-10-11 08:09:09,125 | INFO     | [payload] validate_post thread has finished
[2025-10-11 05:31:02] 2025-10-11 08:09:09,126 | INFO     | [job] job monitor thread has finished
[2025-10-11 05:31:02] 2025-10-11 08:09:09,176 | INFO     | [job] control thread has finished
[2025-10-11 05:31:02] 2025-10-11 08:09:09,467 | INFO     | [data] control thread has finished
[2025-10-11 05:31:02] 2025-10-11 08:09:09,578 | INFO     | [data] copytool_out thread has finished
[2025-10-11 05:31:02] 2025-10-11 08:09:09,689 | INFO     | [job] queue monitor thread has finished
[2025-10-11 05:31:02] 2025-10-11 08:09:10,642 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 05:31:02] 2025-10-11 08:09:14,713 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 05:31:02] 2025-10-11 08:09:35,887 | INFO     | PID=3256467 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 05:31:02] 2025-10-11 08:09:35,887 | INFO     | .. there are 40 such processes running
[2025-10-11 05:31:02] 2025-10-11 08:09:35,888 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 05:31:02] 2025-10-11 08:09:35,888 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 05:31:02] 2025-10-11 08:09:35,888 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 05:31:02] 2025-10-11 08:09:46,452 | INFO     | [monitor] cgroup control has ended
[2025-10-11 05:31:02] 2025-10-11 08:09:48,392 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140394551629632)>', '<ExcThread(monitor, started 140393547032320)>']
[2025-10-11 05:31:02] 2025-10-11 08:09:49,075 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 05:31:02] 2025-10-11 08:09:49,075 | INFO     | [monitor] control thread has ended
[2025-10-11 05:31:02] 2025-10-11 08:09:53,430 | INFO     | all workflow threads have been joined
[2025-10-11 05:31:02] 2025-10-11 08:09:53,431 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 05:31:02] 2025-10-11 08:09:53,431 | INFO     | traces error code: 0
[2025-10-11 05:31:02] 2025-10-11 08:09:53,431 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 05:31:02] 2025-10-11 08:09:54,776 [wrapper] ==== pilot stdout END ====
[2025-10-11 05:31:02] 2025-10-11 08:09:54,808 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 05:31:02] 2025-10-11 08:09:54,837 [wrapper] pilotpid: 3256467
[2025-10-11 05:31:02] 2025-10-11 08:09:54,863 [wrapper] Pilot exit status: 0
[2025-10-11 05:31:02] 2025-10-11 08:09:55,037 [wrapper] pandaids: 6837376060 6837376060
[2025-10-11 05:31:02] 2025-10-11 08:09:55,803 [wrapper] cleanup supervisor_pilot  917112 3256468
[2025-10-11 05:31:02] 2025-10-11 08:09:55,824 [wrapper] Test setup, not cleaning
[2025-10-11 05:31:02] 2025-10-11 08:09:55,851 [wrapper] apfmon messages muted
[2025-10-11 05:31:02] 2025-10-11 08:09:55,897 [wrapper] ==== wrapper stdout END ====
[2025-10-11 05:31:02] 2025-10-11 08:09:55,948 [wrapper] ==== wrapper stderr END ====
[2025-10-11 05:31:02]  *** Error codes and diagnostics ***
[2025-10-11 05:31:02]     "exeErrorCode": 0,
[2025-10-11 05:31:02]     "exeErrorDiag": "",
[2025-10-11 05:31:02]     "pilotErrorCode": 0,
[2025-10-11 05:31:02]     "pilotErrorDiag": "",
[2025-10-11 05:31:02]  *** Listing of results directory ***
[2025-10-11 05:31:02] total 638972
[2025-10-11 05:31:02] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-11 05:31:02] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 19:37 pilot3.tar.gz
[2025-10-11 05:31:02] -rwx------. 1 boincer umatlas     36292 Oct  9 19:39 runpilot2-wrapper.sh
[2025-10-11 05:31:02] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 19:39 queuedata.json
[2025-10-11 05:31:02] -rw-r--r--. 1 boincer umatlas       100 Oct 10 13:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 05:31:02] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 13:52 run_atlas
[2025-10-11 05:31:02] -rw-r--r--. 1 boincer umatlas       105 Oct 10 13:52 job.xml
[2025-10-11 05:31:02] -rw-r--r--. 3 boincer umatlas 223712328 Oct 10 13:52 EVNT.46676267._001185.pool.root.1
[2025-10-11 05:31:02] -rw-r--r--. 3 boincer umatlas 223712328 Oct 10 13:52 ATLAS.root_0
[2025-10-11 05:31:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 13:52 start_atlas.sh
[2025-10-11 05:31:02] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 13:52 shared
[2025-10-11 05:31:02] -rw-r--r--. 2 boincer umatlas    569672 Oct 10 13:52 input.tar.gz
[2025-10-11 05:31:02] -rw-r--r--. 1 boincer umatlas         0 Oct 10 13:52 boinc_lockfile
[2025-10-11 05:31:02] -rw-r--r--. 1 boincer umatlas      2549 Oct 10 17:28 pandaJob.out
[2025-10-11 05:31:02] -rw-------. 1 boincer umatlas    975517 Oct 10 17:28 agis_schedconf.cvmfs.json
[2025-10-11 05:31:02] -rw-------. 1 boincer umatlas 192912515 Oct 11 04:05 HITS.46676269._028242.pool.root.1
[2025-10-11 05:31:02] -rw-r--r--. 1 boincer umatlas       531 Oct 11 04:05 boinc_task_state.xml
[2025-10-11 05:31:02] -rw-------. 1 boincer umatlas      1057 Oct 11 04:07 memory_monitor_summary.json
[2025-10-11 05:31:02] -rw-------. 1 boincer umatlas   1560580 Oct 11 04:07 agis_ddmendpoints.agis.ALL.json
[2025-10-11 05:31:02] -rw-------. 1 boincer umatlas    720425 Oct 11 04:08 log.46676269._028242.job.log.tgz.1
[2025-10-11 05:31:02] -rw-------. 1 boincer umatlas      7850 Oct 11 04:08 heartbeat.json
[2025-10-11 05:31:02] -rw-------. 1 boincer umatlas        96 Oct 11 04:09 pilot_heartbeat.json
[2025-10-11 05:31:02] -rw-------. 1 boincer umatlas      5010 Oct 11 04:09 pilotlog.txt
[2025-10-11 05:31:02] -rw-------. 1 boincer umatlas   4305748 Oct 11 04:09 log.46676269._028242.job.log.1
[2025-10-11 05:31:02] -rw-------. 1 boincer umatlas       357 Oct 11 04:09 output.list
[2025-10-11 05:31:02] -rw-r--r--. 1 boincer umatlas       620 Oct 11 04:09 runtime_log
[2025-10-11 05:31:02] -rw-------. 1 boincer umatlas   5048320 Oct 11 04:09 result.tar.gz
[2025-10-11 05:31:02] -rw-r--r--. 1 boincer umatlas      8779 Oct 11 04:09 runtime_log.err
[2025-10-11 05:31:02] -rw-------. 1 boincer umatlas       787 Oct 11 04:09 9aFNDmjPFR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzdbNDmzmt2Wo.diag
[2025-10-11 05:31:02] -rw-r--r--. 1 boincer umatlas        28 Oct 11 05:30 wrapper_checkpoint.txt
[2025-10-11 05:31:02] -rw-r--r--. 1 boincer umatlas      6660 Oct 11 05:31 init_data.xml
[2025-10-11 05:31:02] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 05:31 boinc_mmap_file
[2025-10-11 05:31:02] -rw-r--r--. 1 boincer umatlas     23136 Oct 11 05:31 stderr.txt
[2025-10-11 05:31:02] HITS file was successfully produced:
[2025-10-11 05:31:02] -rw-------. 1 boincer umatlas 192912515 Oct 11 04:05 shared/HITS.pool.root.1
[2025-10-11 05:31:02]  *** Contents of shared directory: ***
[2025-10-11 05:31:02] total 412380
[2025-10-11 05:31:02] -rw-r--r--. 3 boincer umatlas 223712328 Oct 10 13:52 ATLAS.root_0
[2025-10-11 05:31:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 13:52 start_atlas.sh
[2025-10-11 05:31:02] -rw-r--r--. 2 boincer umatlas    569672 Oct 10 13:52 input.tar.gz
[2025-10-11 05:31:02] -rw-------. 1 boincer umatlas 192912515 Oct 11 04:05 HITS.pool.root.1
[2025-10-11 05:31:02] -rw-------. 1 boincer umatlas   5048320 Oct 11 04:09 result.tar.gz
05:31:04 (3247701): run_atlas exited; CPU time 53484.830603
05:31:04 (3247701): called boinc_finish(0)

</stderr_txt>
]]>

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