Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:11:07 (755024): wrapper (7.7.26015): starting
00:11:07 (755024): wrapper: running run_atlas (--nthreads 9)
[2025-10-10 00:11:08] Arguments: --nthreads 9
[2025-10-10 00:11:08] Threads: 9
[2025-10-10 00:11:08] Checking for CVMFS
[2025-10-10 00:11:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 00:11:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 00:11:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 00:11:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 00:11:11] 2.13.2.0 1140251 19571 255124 151533 3 108 33534833 40960001 17374 16776704 0 23011810 99.706 19425655 8729 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 00:11:11] CVMFS is ok
[2025-10-10 00:11:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 00:11:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 00:11:11] Further information can be found at the LHC@home message board.
[2025-10-10 00:11:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 00:11:11] Checking for apptainer binary...
[2025-10-10 00:11:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 00:11:11] Running /usr/bin/apptainer --version
[2025-10-10 00:11:11] apptainer version 1.4.3-1.el9
[2025-10-10 00:11:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 00:11:13] c7-10-13.aglt2.org
[2025-10-10 00:11:13] apptainer works
[2025-10-10 00:11:13] Set ATHENA_PROC_NUMBER=9
[2025-10-10 00:11:13] Set ATHENA_CORE_NUMBER=9
[2025-10-10 00:11:14] Starting ATLAS job with PandaID=6837366535
[2025-10-10 00:11:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 13:38:51]  *** The last 200 lines of the pilot log: ***
[2025-10-10 13:38:52] 2025-10-10 17:38:11,351 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 13:38:52] 2025-10-10 17:38:11,871 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 13:38:52] 2025-10-10 17:38:11,928 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3292.2431093749997
[2025-10-10 13:38:52] 2025-10-10 17:38:12,199 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6837366535/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 13:38:52] 2025-10-10 17:38:12,200 | INFO     | extracted standard info from prmon json
[2025-10-10 13:38:52] 2025-10-10 17:38:12,228 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 13:38:52] 2025-10-10 17:38:12,229 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 13:38:52] 2025-10-10 17:38:12,241 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 13:38:52] 2025-10-10 17:38:12,242 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 13:38:52] 2025-10-10 17:38:12,433 | INFO     | time since job start (48308s) is within the limit (172800.0s)
[2025-10-10 13:38:52] 2025-10-10 17:38:12,689 | INFO     | fitting pss+swap vs Time
[2025-10-10 13:38:52] 2025-10-10 17:38:12,718 | INFO     | sum of square deviations: 151155309870.69885
[2025-10-10 13:38:52] 2025-10-10 17:38:13,178 | INFO     | sum of deviations: 1049297101123.2837
[2025-10-10 13:38:52] 2025-10-10 17:38:13,179 | INFO     | mean x: 1760093779.9593394
[2025-10-10 13:38:52] 2025-10-10 17:38:13,179 | INFO     | mean y: 2085150.6963151207
[2025-10-10 13:38:52] 2025-10-10 17:38:13,180 | INFO     | -- intersect: -12216217352.843243
[2025-10-10 13:38:52] 2025-10-10 17:38:13,180 | INFO     | intersect: -12216217352.843243
[2025-10-10 13:38:52] 2025-10-10 17:38:13,182 | INFO     | chi2: 15.657067089628875
[2025-10-10 13:38:52] 2025-10-10 17:38:13,187 | INFO     | sum of square deviations: 148292965538.56702
[2025-10-10 13:38:52] 2025-10-10 17:38:13,571 | INFO     | sum of deviations: 1257199382534.6853
[2025-10-10 13:38:52] 2025-10-10 17:38:13,572 | INFO     | mean x: 1760093627.4654732
[2025-10-10 13:38:52] 2025-10-10 17:38:13,572 | INFO     | mean y: 2096228.3772378517
[2025-10-10 13:38:52] 2025-10-10 17:38:13,572 | INFO     | -- intersect: -14919640710.50231
[2025-10-10 13:38:52] 2025-10-10 17:38:13,572 | INFO     | intersect: -14919640710.50231
[2025-10-10 13:38:52] 2025-10-10 17:38:13,603 | INFO     | chi2: 12.136084252629889
[2025-10-10 13:38:52] 2025-10-10 17:38:13,603 | INFO     | current chi2=12.136084252629889 (change=22.48813789225735 %)
[2025-10-10 13:38:52] 2025-10-10 17:38:13,603 | INFO     | right removable region: 781
[2025-10-10 13:38:52] 2025-10-10 17:38:13,635 | INFO     | sum of square deviations: 148292504988.56717
[2025-10-10 13:38:52] 2025-10-10 17:38:13,688 | INFO     | sum of deviations: 832987981479.6891
[2025-10-10 13:38:52] 2025-10-10 17:38:13,688 | INFO     | mean x: 1760093932.4654732
[2025-10-10 13:38:52] 2025-10-10 17:38:13,689 | INFO     | mean y: 2096669.4514066495
[2025-10-10 13:38:52] 2025-10-10 17:38:13,689 | INFO     | -- intersect: -9884694926.200018
[2025-10-10 13:38:52] 2025-10-10 17:38:13,689 | INFO     | intersect: -9884694926.200018
[2025-10-10 13:38:52] 2025-10-10 17:38:13,692 | INFO     | chi2: 11.71915212245779
[2025-10-10 13:38:52] 2025-10-10 17:38:13,692 | INFO     | current chi2=11.71915212245779 (change=25.151038471180403 %)
[2025-10-10 13:38:52] 2025-10-10 17:38:13,694 | INFO     | sum of square deviations: 145466072881.37704
[2025-10-10 13:38:52] 2025-10-10 17:38:13,750 | INFO     | sum of deviations: 666535086408.9186
[2025-10-10 13:38:52] 2025-10-10 17:38:13,750 | INFO     | mean x: 1760094084.971686
[2025-10-10 13:38:52] 2025-10-10 17:38:13,751 | INFO     | mean y: 2105648.268983269
[2025-10-10 13:38:52] 2025-10-10 17:38:13,751 | INFO     | -- intersect: -8062760885.737937
[2025-10-10 13:38:52] 2025-10-10 17:38:13,751 | INFO     | intersect: -8062760885.737937
[2025-10-10 13:38:52] 2025-10-10 17:38:13,754 | INFO     | chi2: 9.50965977351363
[2025-10-10 13:38:52] 2025-10-10 17:38:13,754 | INFO     | current chi2=9.50965977351363 (change=18.853687757069384 %)
[2025-10-10 13:38:52] 2025-10-10 17:38:13,754 | INFO     | left removable region: 20
[2025-10-10 13:38:52] 2025-10-10 17:38:13,756 | INFO     | sum of square deviations: 136663947207.81079
[2025-10-10 13:38:52] 2025-10-10 17:38:13,925 | INFO     | sum of deviations: 633805099060.9102
[2025-10-10 13:38:52] 2025-10-10 17:38:13,940 | INFO     | mean x: 1760094206.9842312
[2025-10-10 13:38:52] 2025-10-10 17:38:13,940 | INFO     | mean y: 2130507.325886991
[2025-10-10 13:38:52] 2025-10-10 17:38:13,941 | INFO     | -- intersect: -8160641796.60781
[2025-10-10 13:38:52] 2025-10-10 17:38:13,941 | INFO     | intersect: -8160641796.60781
[2025-10-10 13:38:52] 2025-10-10 17:38:13,958 | INFO     | chi2: 3.6483247644360994
[2025-10-10 13:38:52] 2025-10-10 17:38:13,958 | INFO     | -- intersect: -8160641796.60781
[2025-10-10 13:38:52] 2025-10-10 17:38:13,958 | INFO     | current memory leak: 4.64 B/s (using 761 data points, chi2=3.65)
[2025-10-10 13:38:52] 2025-10-10 17:38:13,964 | INFO     | could have reported an average CPU frequency of 3291 MHz (29 samples)
[2025-10-10 13:38:52] 2025-10-10 17:38:13,965 | INFO     | ..............................
[2025-10-10 13:38:52] 2025-10-10 17:38:13,965 | INFO     | . Timing measurements:
[2025-10-10 13:38:52] 2025-10-10 17:38:13,966 | INFO     | . get job = 0 s
[2025-10-10 13:38:52] 2025-10-10 17:38:13,966 | INFO     | . initial setup = 9 s
[2025-10-10 13:38:52] 2025-10-10 17:38:13,966 | INFO     | . payload setup = 62 s
[2025-10-10 13:38:52] 2025-10-10 17:38:13,966 | INFO     | . stage-in = 0 s
[2025-10-10 13:38:52] 2025-10-10 17:38:13,966 | INFO     | . payload execution = 48046 s
[2025-10-10 13:38:52] 2025-10-10 17:38:13,966 | INFO     | . stage-out = 9 s
[2025-10-10 13:38:52] 2025-10-10 17:38:13,967 | INFO     | . log creation = 1 s
[2025-10-10 13:38:52] 2025-10-10 17:38:13,991 | INFO     | ..............................
[2025-10-10 13:38:52] 2025-10-10 17:38:14,522 | INFO     | time since job start (48310s) is within the limit (172800.0s)
[2025-10-10 13:38:52] 2025-10-10 17:38:14,958 | INFO     | 
[2025-10-10 13:38:52] 2025-10-10 17:38:14,959 | INFO     | job summary report
[2025-10-10 13:38:52] 2025-10-10 17:38:14,959 | INFO     | --------------------------------------------------
[2025-10-10 13:38:52] 2025-10-10 17:38:14,960 | INFO     | PanDA job id: 6837366535
[2025-10-10 13:38:52] 2025-10-10 17:38:14,960 | INFO     | task id: 46676269
[2025-10-10 13:38:52] 2025-10-10 17:38:14,960 | INFO     | errors: (none)
[2025-10-10 13:38:52] 2025-10-10 17:38:14,960 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 13:38:52] 2025-10-10 17:38:14,960 | INFO     | pilot state: finished 
[2025-10-10 13:38:52] 2025-10-10 17:38:14,960 | INFO     | transexitcode: 0
[2025-10-10 13:38:52] 2025-10-10 17:38:14,960 | INFO     | exeerrorcode: 0
[2025-10-10 13:38:52] 2025-10-10 17:38:14,961 | INFO     | exeerrordiag: 
[2025-10-10 13:38:52] 2025-10-10 17:38:14,961 | INFO     | exitcode: 0
[2025-10-10 13:38:52] 2025-10-10 17:38:14,966 | INFO     | exitmsg: OK
[2025-10-10 13:38:52] 2025-10-10 17:38:14,966 | INFO     | cpuconsumptiontime: 105184 s
[2025-10-10 13:38:52] 2025-10-10 17:38:14,966 | INFO     | nevents: 400
[2025-10-10 13:38:52] 2025-10-10 17:38:14,966 | INFO     | neventsw: 0
[2025-10-10 13:38:52] 2025-10-10 17:38:14,967 | INFO     | pid: 791728
[2025-10-10 13:38:52] 2025-10-10 17:38:14,967 | INFO     | pgrp: 791728
[2025-10-10 13:38:52] 2025-10-10 17:38:14,967 | INFO     | corecount: 9
[2025-10-10 13:38:52] 2025-10-10 17:38:14,967 | INFO     | event service: False
[2025-10-10 13:38:52] 2025-10-10 17:38:14,967 | INFO     | sizes: {0: 2348630, 2: 2348686, 4: 2348742, 5: 2348941, 6: 2348969, 17: 2348997, 28: 2349153, 40: 2349181, 50: 2349471, 51: 2349499, 62: 2349527, 48109: 2389655, 4
[2025-10-10 13:38:52] 2025-10-10 17:38:14,967 | INFO     | --------------------------------------------------
[2025-10-10 13:38:52] 2025-10-10 17:38:14,967 | INFO     | 
[2025-10-10 13:38:52] 2025-10-10 17:38:14,968 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-10 13:38:52] 2025-10-10 17:38:15,006 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 13:38:52] 2025-10-10 17:38:15,007 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 13:38:52] 2025-10-10 17:38:15,007 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 13:38:52] 2025-10-10 17:38:15,007 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 13:38:52] 2025-10-10 17:38:15,007 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 13:38:52] 2025-10-10 17:38:15,008 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 13:38:52] 2025-10-10 17:38:15,008 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 13:38:52] 2025-10-10 17:38:15,008 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 13:38:52] 2025-10-10 17:38:15,008 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 13:38:52] 2025-10-10 17:38:15,008 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 13:38:52] 2025-10-10 17:38:15,008 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 13:38:52] 2025-10-10 17:38:15,009 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 13:38:52] 2025-10-10 17:38:15,009 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 13:38:52] 2025-10-10 17:38:15,009 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 13:38:52] 2025-10-10 17:38:15,009 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 13:38:52] 2025-10-10 17:38:15,009 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 13:38:52] 2025-10-10 17:38:15,009 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 13:38:52] 2025-10-10 17:38:15,010 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 13:38:52] 2025-10-10 17:38:15,010 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 13:38:52] 2025-10-10 17:38:15,010 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 13:38:52] 2025-10-10 17:38:15,010 | INFO     | job 6837366535 has completed (purged errors)
[2025-10-10 13:38:52] 2025-10-10 17:38:15,010 | INFO     | overall cleanup function is called
[2025-10-10 13:38:52] 2025-10-10 17:38:16,025 | INFO     | --- collectZombieJob: --- 10, [791728]
[2025-10-10 13:38:52] 2025-10-10 17:38:16,025 | INFO     | zombie collector waiting for pid 791728
[2025-10-10 13:38:52] 2025-10-10 17:38:16,025 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 13:38:52] 2025-10-10 17:38:16,026 | INFO     | collected zombie processes
[2025-10-10 13:38:52] 2025-10-10 17:38:16,026 | INFO     | will attempt to kill all subprocesses of pid=791728
[2025-10-10 13:38:52] 2025-10-10 17:38:19,379 | INFO     | process IDs to be killed: [791728] (in reverse order)
[2025-10-10 13:38:52] 2025-10-10 17:38:20,317 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 13:38:52] 2025-10-10 17:38:20,328 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 13:38:52] 2025-10-10 17:38:20,459 | INFO     | did not find any defunct processes belonging to 791728
[2025-10-10 13:38:52] 2025-10-10 17:38:20,682 | INFO     | did not find any defunct processes belonging to 791728
[2025-10-10 13:38:52] 2025-10-10 17:38:20,698 | INFO     | ready for new job
[2025-10-10 13:38:52] 2025-10-10 17:38:20,699 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 13:38:52] 2025-10-10 17:38:20,749 | INFO     | ***************************************
[2025-10-10 13:38:52] 2025-10-10 17:38:20,750 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 13:38:52] 2025-10-10 17:38:20,750 | INFO     | ***************************************
[2025-10-10 13:38:52] 2025-10-10 17:38:20,750 | INFO     | 
[2025-10-10 13:38:52] 2025-10-10 17:38:20,783 | INFO     | architecture information:
[2025-10-10 13:38:52] 2025-10-10 17:38:20,792 | INFO     | executing command: cat /etc/os-release
[2025-10-10 13:38:52] 2025-10-10 17:38:21,106 | INFO     | cat /etc/os-release:
[2025-10-10 13:38:52] NAME="CentOS Linux"
[2025-10-10 13:38:52] VERSION="7 (Core)"
[2025-10-10 13:38:52] ID="centos"
[2025-10-10 13:38:52] ID_LIKE="rhel fedora"
[2025-10-10 13:38:52] VERSION_ID="7"
[2025-10-10 13:38:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 13:38:52] ANSI_COLOR="0;31"
[2025-10-10 13:38:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 13:38:52] HOME_URL="https://www.centos.org/"
[2025-10-10 13:38:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 13:38:52] 
[2025-10-10 13:38:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 13:38:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 13:38:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 13:38:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 13:38:52] 
[2025-10-10 13:38:52] 2025-10-10 17:38:21,106 | INFO     | ***************************************
[2025-10-10 13:38:52] 2025-10-10 17:38:21,610 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-10 13:38:52] 2025-10-10 17:38:21,845 | INFO     | sufficient remaining disk space (85184217088 B)
[2025-10-10 13:38:52] 2025-10-10 17:38:21,871 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 13:38:52] 2025-10-10 17:38:21,871 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 13:38:52] 2025-10-10 17:38:21,872 | INFO     | update_server=False
[2025-10-10 13:38:52] 2025-10-10 17:38:21,872 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 13:38:52] 2025-10-10 17:38:21,875 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 13:38:52] 2025-10-10 17:38:21,925 | INFO     | all data control threads have been joined
[2025-10-10 13:38:52] 2025-10-10 17:38:22,387 | INFO     | all payload control threads have been joined
[2025-10-10 13:38:52] 2025-10-10 17:38:22,694 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 13:38:52] 2025-10-10 17:38:22,695 | INFO     | aborting loop
[2025-10-10 13:38:52] 2025-10-10 17:38:22,878 | INFO     | [job] retrieve thread has finished
[2025-10-10 13:38:52] 2025-10-10 17:38:22,931 | INFO     | [data] control thread has finished
[2025-10-10 13:38:52] 2025-10-10 17:38:22,964 | INFO     | [payload] validate_post thread has finished
[2025-10-10 13:38:52] 2025-10-10 17:38:23,234 | INFO     | all job control threads have been joined
[2025-10-10 13:38:52] 2025-10-10 17:38:23,393 | INFO     | [payload] control thread has finished
[2025-10-10 13:38:52] 2025-10-10 17:38:23,480 | INFO     | [job] validate thread has finished
[2025-10-10 13:38:52] 2025-10-10 17:38:23,701 | INFO     | [job] job monitor thread has finished
[2025-10-10 13:38:52] 2025-10-10 17:38:23,848 | INFO     | [data] copytool_in thread has finished
[2025-10-10 13:38:52] 2025-10-10 17:38:23,849 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 13:38:52] 2025-10-10 17:38:23,882 | INFO     | [data] copytool_out thread has finished
[2025-10-10 13:38:52] 2025-10-10 17:38:23,995 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 13:38:52] 2025-10-10 17:38:24,216 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 13:38:52] 2025-10-10 17:38:24,219 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 13:38:52] 2025-10-10 17:38:24,252 | INFO     | [job] control thread has finished
[2025-10-10 13:38:52] 2025-10-10 17:38:24,354 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 13:38:52] 2025-10-10 17:38:24,453 | INFO     | [payload] failed_post thread has finished
[2025-10-10 13:38:52] 2025-10-10 17:38:24,490 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 13:38:52] 2025-10-10 17:38:25,001 | INFO     | [job] queue monitor thread has finished
[2025-10-10 13:38:52] 2025-10-10 17:38:28,500 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 13:38:52] 2025-10-10 17:38:34,665 | INFO     | [monitor] cgroup control has ended
[2025-10-10 13:38:52] 2025-10-10 17:38:34,874 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140421232355136)>', '<ExcThread(monitor, started 140420600297216)>']
[2025-10-10 13:38:52] 2025-10-10 17:38:39,943 | INFO     | all workflow threads have been joined
[2025-10-10 13:38:52] 2025-10-10 17:38:39,955 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 13:38:52] 2025-10-10 17:38:39,956 | INFO     | traces error code: 0
[2025-10-10 13:38:52] 2025-10-10 17:38:39,957 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 13:38:52] 2025-10-10 17:38:48,445 | INFO     | PID=778355 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 13:38:52] 2025-10-10 17:38:48,449 | INFO     | .. there are 18 such processes running
[2025-10-10 13:38:52] 2025-10-10 17:38:48,451 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 13:38:52] 2025-10-10 17:38:48,451 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 13:38:52] 2025-10-10 17:38:48,451 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 13:38:52] 2025-10-10 17:38:48,451 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 13:38:52] 2025-10-10 17:38:48,451 | INFO     | [monitor] control thread has ended
[2025-10-10 13:38:52] 2025-10-10 17:38:48,956 [wrapper] ==== pilot stdout END ====
[2025-10-10 13:38:52] 2025-10-10 17:38:49,034 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 13:38:52] 2025-10-10 17:38:49,104 [wrapper] pilotpid: 778355
[2025-10-10 13:38:52] 2025-10-10 17:38:49,173 [wrapper] Pilot exit status: 0
[2025-10-10 13:38:52] 2025-10-10 17:38:49,476 [wrapper] pandaids: 6837366535
[2025-10-10 13:38:52] 2025-10-10 17:38:50,681 [wrapper] cleanup supervisor_pilot 2026047 778356
[2025-10-10 13:38:52] 2025-10-10 17:38:50,689 [wrapper] Test setup, not cleaning
[2025-10-10 13:38:52] 2025-10-10 17:38:50,703 [wrapper] apfmon messages muted
[2025-10-10 13:38:52] 2025-10-10 17:38:50,709 [wrapper] ==== wrapper stdout END ====
[2025-10-10 13:38:52] 2025-10-10 17:38:50,714 [wrapper] ==== wrapper stderr END ====
[2025-10-10 13:38:52]  *** Error codes and diagnostics ***
[2025-10-10 13:38:52]     "exeErrorCode": 0,
[2025-10-10 13:38:52]     "exeErrorDiag": "",
[2025-10-10 13:38:52]     "pilotErrorCode": 0,
[2025-10-10 13:38:52]     "pilotErrorDiag": "",
[2025-10-10 13:38:52]  *** Listing of results directory ***
[2025-10-10 13:38:52] total 429192
[2025-10-10 13:38:52] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 18:55 pilot3.tar.gz
[2025-10-10 13:38:52] -rwx------. 1 boincer umatlas     36292 Oct  9 19:04 runpilot2-wrapper.sh
[2025-10-10 13:38:52] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 19:04 queuedata.json
[2025-10-10 13:38:52] -rw-r--r--. 1 boincer umatlas       100 Oct 10 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 13:38:52] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 00:10 run_atlas
[2025-10-10 13:38:52] -rw-r--r--. 1 boincer umatlas       105 Oct 10 00:10 job.xml
[2025-10-10 13:38:52] -rw-r--r--. 2 boincer umatlas 221867261 Oct 10 00:11 EVNT.46676267._001165.pool.root.1
[2025-10-10 13:38:52] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 00:11 shared
[2025-10-10 13:38:52] -rw-r--r--. 2 boincer umatlas    569679 Oct 10 00:11 input.tar.gz
[2025-10-10 13:38:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 00:11 start_atlas.sh
[2025-10-10 13:38:52] -rw-r--r--. 1 boincer umatlas         0 Oct 10 00:11 boinc_lockfile
[2025-10-10 13:38:52] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 00:11 pandaJob.out
[2025-10-10 13:38:52] -rw-------. 1 boincer umatlas    975454 Oct 10 00:12 agis_schedconf.cvmfs.json
[2025-10-10 13:38:52] drwx------. 5 boincer umatlas      4096 Oct 10 00:13 pilot3
[2025-10-10 13:38:52] -rw-------. 1 boincer umatlas 201605877 Oct 10 13:31 HITS.46676269._027738.pool.root.1
[2025-10-10 13:38:52] -rw-r--r--. 1 boincer umatlas       532 Oct 10 13:31 boinc_task_state.xml
[2025-10-10 13:38:52] -rw-------. 1 boincer umatlas      1029 Oct 10 13:36 memory_monitor_summary.json
[2025-10-10 13:38:52] -rw-------. 1 boincer umatlas   1560580 Oct 10 13:36 agis_ddmendpoints.agis.ALL.json
[2025-10-10 13:38:52] -rw-------. 1 boincer umatlas    847296 Oct 10 13:36 log.46676269._027738.job.log.tgz.1
[2025-10-10 13:38:52] -rw-r--r--. 1 boincer umatlas      6898 Oct 10 13:38 init_data.xml
[2025-10-10 13:38:52] -rw-------. 1 boincer umatlas      6183 Oct 10 13:38 heartbeat.json
[2025-10-10 13:38:52] -rw-------. 1 boincer umatlas        95 Oct 10 13:38 pilot_heartbeat.json
[2025-10-10 13:38:52] -rw-------. 1 boincer umatlas       822 Oct 10 13:38 pilotlog.txt
[2025-10-10 13:38:52] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 13:38 boinc_mmap_file
[2025-10-10 13:38:52] -rw-r--r--. 1 boincer umatlas        29 Oct 10 13:38 wrapper_checkpoint.txt
[2025-10-10 13:38:52] -rw-------. 1 boincer umatlas   5214927 Oct 10 13:38 log.46676269._027738.job.log.1
[2025-10-10 13:38:52] -rw-------. 1 boincer umatlas       357 Oct 10 13:38 output.list
[2025-10-10 13:38:52] -rw-r--r--. 1 boincer umatlas       620 Oct 10 13:38 runtime_log
[2025-10-10 13:38:52] -rw-------. 1 boincer umatlas   6082560 Oct 10 13:38 result.tar.gz
[2025-10-10 13:38:52] -rw-r--r--. 1 boincer umatlas      8704 Oct 10 13:38 runtime_log.err
[2025-10-10 13:38:52] -rw-------. 1 boincer umatlas       660 Oct 10 13:38 nibKDmtrER8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkZbNDmz7xO0m.diag
[2025-10-10 13:38:52] -rw-r--r--. 1 boincer umatlas     12750 Oct 10 13:38 stderr.txt
[2025-10-10 13:38:52] HITS file was successfully produced:
[2025-10-10 13:38:52] -rw-------. 1 boincer umatlas 201605877 Oct 10 13:31 shared/HITS.pool.root.1
[2025-10-10 13:38:52]  *** Contents of shared directory: ***
[2025-10-10 13:38:52] total 420076
[2025-10-10 13:38:52] -rw-r--r--. 2 boincer umatlas 221867261 Oct 10 00:11 ATLAS.root_0
[2025-10-10 13:38:52] -rw-r--r--. 2 boincer umatlas    569679 Oct 10 00:11 input.tar.gz
[2025-10-10 13:38:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 00:11 start_atlas.sh
[2025-10-10 13:38:52] -rw-------. 1 boincer umatlas 201605877 Oct 10 13:31 HITS.pool.root.1
[2025-10-10 13:38:52] -rw-------. 1 boincer umatlas   6082560 Oct 10 13:38 result.tar.gz
13:38:54 (755024): run_atlas exited; CPU time 107257.619743
13:38:54 (755024): called boinc_finish(0)

</stderr_txt>
]]>

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