Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:18:27 (320563): wrapper (7.7.26015): starting
00:18:27 (320563): wrapper: running run_atlas (--nthreads 9)
[2025-10-10 00:18:27] Arguments: --nthreads 9
[2025-10-10 00:18:27] Threads: 9
[2025-10-10 00:18:27] Checking for CVMFS
[2025-10-10 00:18:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 00:18:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 00:18:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 00:18:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 00:18:28] 2.13.2.0 3361836 824 99904 151534 0 64 32549036 32935937 24186 16776704 0 2178006 99.839 1403441 34758 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 00:18:28] CVMFS is ok
[2025-10-10 00:18:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 00:18:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 00:18:28] Further information can be found at the LHC@home message board.
[2025-10-10 00:18:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 00:18:28] Checking for apptainer binary...
[2025-10-10 00:18:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 00:18:28] Running /usr/bin/apptainer --version
[2025-10-10 00:18:28] apptainer version 1.4.3-1.el9
[2025-10-10 00:18:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 00:18:28] c-8-14.aglt2.org
[2025-10-10 00:18:28] apptainer works
[2025-10-10 00:18:28] Set ATHENA_PROC_NUMBER=9
[2025-10-10 00:18:28] Set ATHENA_CORE_NUMBER=9
[2025-10-10 00:18:28] Starting ATLAS job with PandaID=6837375562
[2025-10-10 00:18:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:28:50 (373569): wrapper (7.7.26015): starting
00:28:50 (373569): wrapper: running run_atlas (--nthreads 10)
[2025-10-10 00:28:50] Arguments: --nthreads 10
[2025-10-10 00:28:50] Threads: 10
[2025-10-10 00:28:50] This job has been restarted, cleaning up previous attempt
[2025-10-10 00:28:50] Checking for CVMFS
[2025-10-10 00:28:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 00:28:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 00:28:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 00:28:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 00:28:52] 2.13.2.0 3361836 834 110108 151534 2 464 32565374 32935937 21235 16776704 0 2260300 99.845 1403443 34755 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 00:28:52] CVMFS is ok
[2025-10-10 00:28:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 00:28:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 00:28:52] Further information can be found at the LHC@home message board.
[2025-10-10 00:28:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 00:28:52] Checking for apptainer binary...
[2025-10-10 00:28:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 00:28:52] Running /usr/bin/apptainer --version
[2025-10-10 00:28:52] apptainer version 1.4.3-1.el9
[2025-10-10 00:28:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 00:28:53] c-8-14.aglt2.org
[2025-10-10 00:28:53] apptainer works
[2025-10-10 00:28:53] Set ATHENA_PROC_NUMBER=10
[2025-10-10 00:28:53] Set ATHENA_CORE_NUMBER=10
[2025-10-10 00:28:53] Starting ATLAS job with PandaID=6837375562
[2025-10-10 00:28:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 13:52:10]  *** The last 200 lines of the pilot log: ***
[2025-10-10 13:52:11] 2025-10-10 17:03:20,945 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 13:52:11] 2025-10-10 17:03:20,957 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 13:52:11] 2025-10-10 17:03:20,957 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 13:52:11] 2025-10-10 17:03:21,060 | INFO     | fitting pss+swap vs Time
[2025-10-10 13:52:11] 2025-10-10 17:03:21,061 | INFO     | sum of square deviations: 125659584127.73433
[2025-10-10 13:52:11] 2025-10-10 17:03:21,133 | INFO     | sum of deviations: 313619101021.3807
[2025-10-10 13:52:11] 2025-10-10 17:03:21,133 | INFO     | mean x: 1760093177.018919
[2025-10-10 13:52:11] 2025-10-10 17:03:21,133 | INFO     | mean y: 2237996.4013513513
[2025-10-10 13:52:11] 2025-10-10 17:03:21,133 | INFO     | -- intersect: -4390573293.897258
[2025-10-10 13:52:11] 2025-10-10 17:03:21,133 | INFO     | intersect: -4390573293.897258
[2025-10-10 13:52:11] 2025-10-10 17:03:21,151 | INFO     | chi2: 6.234941389080183
[2025-10-10 13:52:11] 2025-10-10 17:03:21,153 | INFO     | sum of square deviations: 123130074851.12094
[2025-10-10 13:52:11] 2025-10-10 17:03:21,253 | INFO     | sum of deviations: 526201786756.87866
[2025-10-10 13:52:11] 2025-10-10 17:03:21,254 | INFO     | mean x: 1760093024.5292518
[2025-10-10 13:52:11] 2025-10-10 17:03:21,254 | INFO     | mean y: 2250813.4707482993
[2025-10-10 13:52:11] 2025-10-10 17:03:21,254 | INFO     | -- intersect: -7519584087.429416
[2025-10-10 13:52:11] 2025-10-10 17:03:21,254 | INFO     | intersect: -7519584087.429416
[2025-10-10 13:52:11] 2025-10-10 17:03:21,271 | INFO     | chi2: 2.5867010152661845
[2025-10-10 13:52:11] 2025-10-10 17:03:21,271 | INFO     | current chi2=2.5867010152661845 (change=58.51282548066117 %)
[2025-10-10 13:52:11] 2025-10-10 17:03:21,279 | INFO     | sum of square deviations: 120634662352.00183
[2025-10-10 13:52:11] 2025-10-10 17:03:21,340 | INFO     | sum of deviations: 535527061072.4828
[2025-10-10 13:52:11] 2025-10-10 17:03:21,340 | INFO     | mean x: 1760092872.0369864
[2025-10-10 13:52:11] 2025-10-10 17:03:21,340 | INFO     | mean y: 2251384.0191780822
[2025-10-10 13:52:11] 2025-10-10 17:03:21,340 | INFO     | -- intersect: -7811235590.6136265
[2025-10-10 13:52:11] 2025-10-10 17:03:21,341 | INFO     | intersect: -7811235590.6136265
[2025-10-10 13:52:11] 2025-10-10 17:03:21,352 | INFO     | chi2: 2.558958836201772
[2025-10-10 13:52:11] 2025-10-10 17:03:21,352 | INFO     | current chi2=2.558958836201772 (change=1.072492680858122 %)
[2025-10-10 13:52:11] 2025-10-10 17:03:21,352 | INFO     | right removable region: 729
[2025-10-10 13:52:11] 2025-10-10 17:03:21,353 | INFO     | sum of square deviations: 123129389211.12097
[2025-10-10 13:52:11] 2025-10-10 17:03:21,379 | INFO     | sum of deviations: 171342719553.16052
[2025-10-10 13:52:11] 2025-10-10 17:03:21,379 | INFO     | mean x: 1760093329.5292518
[2025-10-10 13:52:11] 2025-10-10 17:03:21,380 | INFO     | mean y: 2246558.36462585
[2025-10-10 13:52:11] 2025-10-10 17:03:21,380 | INFO     | -- intersect: -2447040160.9240026
[2025-10-10 13:52:11] 2025-10-10 17:03:21,380 | INFO     | intersect: -2447040160.9240026
[2025-10-10 13:52:11] 2025-10-10 17:03:21,381 | INFO     | chi2: 4.3871227322963895
[2025-10-10 13:52:11] 2025-10-10 17:03:21,381 | INFO     | current chi2=4.3871227322963895 (change=29.63650404188315 %)
[2025-10-10 13:52:11] 2025-10-10 17:03:21,382 | INFO     | sum of square deviations: 120633470656.0017
[2025-10-10 13:52:11] 2025-10-10 17:03:21,398 | INFO     | sum of deviations: 129489328296.59885
[2025-10-10 13:52:11] 2025-10-10 17:03:21,399 | INFO     | mean x: 1760093482.0369864
[2025-10-10 13:52:11] 2025-10-10 17:03:21,399 | INFO     | mean y: 2249117.1630136985
[2025-10-10 13:52:11] 2025-10-10 17:03:21,399 | INFO     | -- intersect: -1887055082.4824443
[2025-10-10 13:52:11] 2025-10-10 17:03:21,399 | INFO     | intersect: -1887055082.4824443
[2025-10-10 13:52:11] 2025-10-10 17:03:21,400 | INFO     | chi2: 4.2737961550251
[2025-10-10 13:52:11] 2025-10-10 17:03:21,400 | INFO     | current chi2=4.2737961550251 (change=2.583164050483943 %)
[2025-10-10 13:52:11] 2025-10-10 17:03:21,401 | INFO     | left removable region: 20
[2025-10-10 13:52:11] 2025-10-10 17:03:21,402 | INFO     | sum of square deviations: 110520078322.20035
[2025-10-10 13:52:11] 2025-10-10 17:03:21,416 | INFO     | sum of deviations: 279017017377.7361
[2025-10-10 13:52:11] 2025-10-10 17:03:21,417 | INFO     | mean x: 1760093451.5655854
[2025-10-10 13:52:11] 2025-10-10 17:03:21,417 | INFO     | mean y: 2267841.1777150915
[2025-10-10 13:52:11] 2025-10-10 17:03:21,417 | INFO     | -- intersect: -4441232675.807235
[2025-10-10 13:52:11] 2025-10-10 17:03:21,417 | INFO     | intersect: -4441232675.807235
[2025-10-10 13:52:11] 2025-10-10 17:03:21,418 | INFO     | chi2: 0.3500485586205548
[2025-10-10 13:52:11] 2025-10-10 17:03:21,419 | INFO     | -- intersect: -4441232675.807235
[2025-10-10 13:52:11] 2025-10-10 17:03:21,419 | INFO     | current memory leak: 2.52 B/s (using 709 data points, chi2=0.35)
[2025-10-10 13:52:11] 2025-10-10 17:03:21,420 | INFO     | could have reported an average CPU frequency of 2600 MHz (28 samples)
[2025-10-10 13:52:11] 2025-10-10 17:03:21,421 | INFO     | ..............................
[2025-10-10 13:52:11] 2025-10-10 17:03:21,421 | INFO     | . Timing measurements:
[2025-10-10 13:52:11] 2025-10-10 17:03:21,421 | INFO     | . get job = 0 s
[2025-10-10 13:52:11] 2025-10-10 17:03:21,421 | INFO     | . initial setup = 1 s
[2025-10-10 13:52:11] 2025-10-10 17:03:21,421 | INFO     | . payload setup = 18 s
[2025-10-10 13:52:11] 2025-10-10 17:03:21,421 | INFO     | . stage-in = 0 s
[2025-10-10 13:52:11] 2025-10-10 17:03:21,421 | INFO     | . payload execution = 45110 s
[2025-10-10 13:52:11] 2025-10-10 17:03:21,421 | INFO     | . stage-out = 12 s
[2025-10-10 13:52:11] 2025-10-10 17:03:21,422 | INFO     | . log creation = 2 s
[2025-10-10 13:52:11] 2025-10-10 17:03:21,422 | INFO     | ..............................
[2025-10-10 13:52:11] 2025-10-10 17:03:22,012 | INFO     | 
[2025-10-10 13:52:11] 2025-10-10 17:03:22,012 | INFO     | job summary report
[2025-10-10 13:52:11] 2025-10-10 17:03:22,012 | INFO     | --------------------------------------------------
[2025-10-10 13:52:11] 2025-10-10 17:03:22,012 | INFO     | PanDA job id: 6837375562
[2025-10-10 13:52:11] 2025-10-10 17:03:22,012 | INFO     | task id: 46676269
[2025-10-10 13:52:11] 2025-10-10 17:03:22,012 | INFO     | errors: (none)
[2025-10-10 13:52:11] 2025-10-10 17:03:22,013 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 13:52:11] 2025-10-10 17:03:22,013 | INFO     | pilot state: finished 
[2025-10-10 13:52:11] 2025-10-10 17:03:22,013 | INFO     | transexitcode: 0
[2025-10-10 13:52:11] 2025-10-10 17:03:22,013 | INFO     | exeerrorcode: 0
[2025-10-10 13:52:11] 2025-10-10 17:03:22,013 | INFO     | exeerrordiag: 
[2025-10-10 13:52:11] 2025-10-10 17:03:22,013 | INFO     | exitcode: 0
[2025-10-10 13:52:11] 2025-10-10 17:03:22,013 | INFO     | exitmsg: OK
[2025-10-10 13:52:11] 2025-10-10 17:03:22,013 | INFO     | cpuconsumptiontime: 52450 s
[2025-10-10 13:52:11] 2025-10-10 17:03:22,013 | INFO     | nevents: 400
[2025-10-10 13:52:11] 2025-10-10 17:03:22,014 | INFO     | neventsw: 0
[2025-10-10 13:52:11] 2025-10-10 17:03:22,042 | INFO     | pid: 411863
[2025-10-10 13:52:11] 2025-10-10 17:03:22,042 | INFO     | pgrp: 411863
[2025-10-10 13:52:11] 2025-10-10 17:03:22,042 | INFO     | corecount: 10
[2025-10-10 13:52:11] 2025-10-10 17:03:22,042 | INFO     | event service: False
[2025-10-10 13:52:11] 2025-10-10 17:03:22,042 | INFO     | sizes: {0: 2348028, 1: 2348884, 2: 2348884, 13: 2348912, 17: 2349230, 23: 2349258, 45134: 2392710, 45135: 2392709, 45148: 2401763, 45149: 2401819, 45208: 2402013}
[2025-10-10 13:52:11] 2025-10-10 17:03:22,042 | INFO     | --------------------------------------------------
[2025-10-10 13:52:11] 2025-10-10 17:03:22,042 | INFO     | 
[2025-10-10 13:52:11] 2025-10-10 17:03:22,043 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 13:52:11] 2025-10-10 17:03:22,371 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 13:52:11] 2025-10-10 17:03:22,371 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 13:52:11] 2025-10-10 17:03:22,371 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 13:52:11] 2025-10-10 17:03:22,372 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 13:52:11] 2025-10-10 17:03:22,372 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 13:52:11] 2025-10-10 17:03:22,372 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 13:52:11] 2025-10-10 17:03:22,372 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 13:52:11] 2025-10-10 17:03:22,372 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 13:52:11] 2025-10-10 17:03:22,372 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 13:52:11] 2025-10-10 17:03:22,372 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 13:52:11] 2025-10-10 17:03:22,372 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 13:52:11] 2025-10-10 17:03:22,373 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 13:52:11] 2025-10-10 17:03:22,373 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 13:52:11] 2025-10-10 17:03:22,373 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 13:52:11] 2025-10-10 17:03:22,373 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 13:52:11] 2025-10-10 17:03:22,373 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 13:52:11] 2025-10-10 17:03:22,373 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 13:52:11] 2025-10-10 17:03:22,373 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 13:52:11] 2025-10-10 17:03:22,373 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 13:52:11] 2025-10-10 17:03:22,373 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 13:52:11] 2025-10-10 17:03:22,374 | INFO     | job 6837375562 has completed (purged errors)
[2025-10-10 13:52:11] 2025-10-10 17:03:22,374 | INFO     | overall cleanup function is called
[2025-10-10 13:52:11] 2025-10-10 17:03:23,429 | INFO     | --- collectZombieJob: --- 10, [411863]
[2025-10-10 13:52:11] 2025-10-10 17:03:23,429 | INFO     | zombie collector waiting for pid 411863
[2025-10-10 13:52:11] 2025-10-10 17:03:23,429 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 13:52:11] 2025-10-10 17:03:23,429 | INFO     | collected zombie processes
[2025-10-10 13:52:11] 2025-10-10 17:03:23,429 | INFO     | will attempt to kill all subprocesses of pid=411863
[2025-10-10 13:52:11] 2025-10-10 17:03:25,573 | INFO     | process IDs to be killed: [411863] (in reverse order)
[2025-10-10 13:52:11] 2025-10-10 17:03:26,596 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 13:52:11] 2025-10-10 17:03:26,596 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 13:52:11] 2025-10-10 17:03:26,784 | INFO     | did not find any defunct processes belonging to 411863
[2025-10-10 13:52:11] 2025-10-10 17:03:26,819 | INFO     | did not find any defunct processes belonging to 411863
[2025-10-10 13:52:11] 2025-10-10 17:03:26,820 | INFO     | ready for new job
[2025-10-10 13:52:11] 2025-10-10 17:03:26,820 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 13:52:11] 2025-10-10 17:03:26,823 | INFO     | ***************************************
[2025-10-10 13:52:11] 2025-10-10 17:03:26,824 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 13:52:11] 2025-10-10 17:03:26,824 | INFO     | ***************************************
[2025-10-10 13:52:11] 2025-10-10 17:03:26,824 | INFO     | 
[2025-10-10 13:52:11] 2025-10-10 17:03:26,862 | INFO     | architecture information:
[2025-10-10 13:52:11] 2025-10-10 17:03:26,874 | INFO     | executing command: cat /etc/os-release
[2025-10-10 13:52:11] 2025-10-10 17:03:27,641 | INFO     | cat /etc/os-release:
[2025-10-10 13:52:11] NAME="CentOS Linux"
[2025-10-10 13:52:11] VERSION="7 (Core)"
[2025-10-10 13:52:11] ID="centos"
[2025-10-10 13:52:11] ID_LIKE="rhel fedora"
[2025-10-10 13:52:11] VERSION_ID="7"
[2025-10-10 13:52:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 13:52:11] ANSI_COLOR="0;31"
[2025-10-10 13:52:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 13:52:11] HOME_URL="https://www.centos.org/"
[2025-10-10 13:52:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 13:52:11] 
[2025-10-10 13:52:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 13:52:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 13:52:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 13:52:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 13:52:11] 
[2025-10-10 13:52:11] 2025-10-10 17:03:27,641 | INFO     | ***************************************
[2025-10-10 13:52:11] 2025-10-10 17:03:28,146 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 13:52:11] 2025-10-10 17:03:28,311 | INFO     | sufficient remaining disk space (74647076864 B)
[2025-10-10 13:52:11] 2025-10-10 17:03:28,312 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 13:52:11] 2025-10-10 17:03:28,312 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 13:52:11] 2025-10-10 17:03:28,312 | INFO     | update_server=False
[2025-10-10 13:52:11] 2025-10-10 17:03:28,312 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 13:52:11] 2025-10-10 17:03:28,476 | INFO     | all payload control threads have been joined
[2025-10-10 13:52:11] 2025-10-10 17:03:28,702 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 13:52:11] 2025-10-10 17:03:28,702 | INFO     | aborting loop
[2025-10-10 13:52:11] 2025-10-10 17:03:28,839 | INFO     | all data control threads have been joined
[2025-10-10 13:52:11] 2025-10-10 17:03:29,225 | INFO     | all job control threads have been joined
[2025-10-10 13:52:11] 2025-10-10 17:03:29,318 | INFO     | [job] retrieve thread has finished
[2025-10-10 13:52:11] 2025-10-10 17:03:29,483 | INFO     | [payload] control thread has finished
[2025-10-10 13:52:11] 2025-10-10 17:03:29,742 | INFO     | [job] job monitor thread has finished
[2025-10-10 13:52:11] 2025-10-10 17:03:29,793 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 13:52:11] 2025-10-10 17:03:29,844 | INFO     | [data] control thread has finished
[2025-10-10 13:52:11] 2025-10-10 17:03:30,211 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 13:52:11] 2025-10-10 17:03:30,233 | INFO     | [job] control thread has finished
[2025-10-10 13:52:11] 2025-10-10 17:03:30,246 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 13:52:11] 2025-10-10 17:03:30,253 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 13:52:11] 2025-10-10 17:03:30,253 | INFO     | [data] copytool_in thread has finished
[2025-10-10 13:52:11] 2025-10-10 17:03:30,575 | INFO     | [job] validate thread has finished
[2025-10-10 13:52:11] 2025-10-10 17:03:30,581 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 13:52:11] 2025-10-10 17:03:30,673 | INFO     | [payload] validate_post thread has finished
[2025-10-10 13:52:11] 2025-10-10 17:03:30,690 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 13:52:11] 2025-10-10 17:03:30,813 | INFO     | [payload] failed_post thread has finished
[2025-10-10 13:52:11] 2025-10-10 17:03:31,696 | INFO     | [job] queue monitor thread has finished
[2025-10-10 13:52:11] 2025-10-10 17:03:31,827 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 13:52:11] 2025-10-10 17:03:31,855 | INFO     | [data] copytool_out thread has finished
[2025-10-10 13:52:11] 2025-10-10 17:03:35,872 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 13:52:11] 2025-10-10 17:03:53,153 | INFO     | [monitor] cgroup control has ended
[2025-10-10 13:52:11] 2025-10-10 17:03:53,165 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140436769589056)>', '<ExcThread(monitor, started 140435834009344)>']
[2025-10-10 13:52:11] 2025-10-10 17:03:55,452 | INFO     | PID=384988 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 13:52:11] 2025-10-10 17:03:55,453 | INFO     | .. there are 35 such processes running
[2025-10-10 13:52:11] 2025-10-10 17:03:55,453 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 13:52:11] 2025-10-10 17:03:55,453 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 13:52:11] 2025-10-10 17:03:55,453 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 13:52:11] 2025-10-10 17:03:55,453 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 13:52:11] 2025-10-10 17:03:55,454 | INFO     | [monitor] control thread has ended
[2025-10-10 13:52:11] 2025-10-10 17:03:58,202 | INFO     | all workflow threads have been joined
[2025-10-10 13:52:11] 2025-10-10 17:03:58,202 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 13:52:11] 2025-10-10 17:03:58,202 | INFO     | traces error code: 0
[2025-10-10 13:52:11] 2025-10-10 17:03:58,203 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 13:52:11] 2025-10-10 17:04:00,041 [wrapper] ==== pilot stdout END ====
[2025-10-10 13:52:11] 2025-10-10 17:04:00,066 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 13:52:11] 2025-10-10 17:04:00,083 [wrapper] pilotpid: 384988
[2025-10-10 13:52:11] 2025-10-10 17:04:00,101 [wrapper] Pilot exit status: 0
[2025-10-10 13:52:11] 2025-10-10 17:04:00,192 [wrapper] pandaids: 6837375562 6837375562
[2025-10-10 13:52:11] 2025-10-10 17:04:00,585 [wrapper] cleanup supervisor_pilot 2572533 384989
[2025-10-10 13:52:11] 2025-10-10 17:04:00,604 [wrapper] Test setup, not cleaning
[2025-10-10 13:52:11] 2025-10-10 17:04:00,626 [wrapper] apfmon messages muted
[2025-10-10 13:52:11] 2025-10-10 17:04:00,668 [wrapper] ==== wrapper stdout END ====
[2025-10-10 13:52:11] 2025-10-10 17:04:00,710 [wrapper] ==== wrapper stderr END ====
[2025-10-10 13:52:11]  *** Error codes and diagnostics ***
[2025-10-10 13:52:11]     "exeErrorCode": 0,
[2025-10-10 13:52:11]     "exeErrorDiag": "",
[2025-10-10 13:52:11]     "pilotErrorCode": 0,
[2025-10-10 13:52:11]     "pilotErrorDiag": "",
[2025-10-10 13:52:11]  *** Listing of results directory ***
[2025-10-10 13:52:11] total 633420
[2025-10-10 13:52:11] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-10 13:52:11] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 18:55 pilot3.tar.gz
[2025-10-10 13:52:11] -rwx------. 1 boincer umatlas     36292 Oct  9 19:24 runpilot2-wrapper.sh
[2025-10-10 13:52:11] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 19:24 queuedata.json
[2025-10-10 13:52:11] -rw-r--r--. 1 boincer umatlas       100 Oct 10 00:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 13:52:11] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 00:18 run_atlas
[2025-10-10 13:52:11] -rw-r--r--. 1 boincer umatlas       105 Oct 10 00:18 job.xml
[2025-10-10 13:52:11] -rw-r--r--. 3 boincer umatlas 219696781 Oct 10 00:18 EVNT.46676267._001176.pool.root.1
[2025-10-10 13:52:11] -rw-r--r--. 3 boincer umatlas 219696781 Oct 10 00:18 ATLAS.root_0
[2025-10-10 13:52:11] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 00:18 start_atlas.sh
[2025-10-10 13:52:11] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 00:18 shared
[2025-10-10 13:52:11] -rw-r--r--. 2 boincer umatlas    569684 Oct 10 00:18 input.tar.gz
[2025-10-10 13:52:11] -rw-r--r--. 1 boincer umatlas         0 Oct 10 00:18 boinc_lockfile
[2025-10-10 13:52:11] -rw-r--r--. 1 boincer umatlas      2549 Oct 10 00:28 pandaJob.out
[2025-10-10 13:52:11] -rw-------. 1 boincer umatlas    975454 Oct 10 00:29 agis_schedconf.cvmfs.json
[2025-10-10 13:52:11] -rw-------. 1 boincer umatlas 194104420 Oct 10 12:57 HITS.46676269._028022.pool.root.1
[2025-10-10 13:52:11] -rw-r--r--. 1 boincer umatlas       528 Oct 10 12:57 boinc_task_state.xml
[2025-10-10 13:52:11] -rw-------. 1 boincer umatlas      1053 Oct 10 13:02 memory_monitor_summary.json
[2025-10-10 13:52:11] -rw-------. 1 boincer umatlas   1560580 Oct 10 13:02 agis_ddmendpoints.agis.ALL.json
[2025-10-10 13:52:11] -rw-------. 1 boincer umatlas    817736 Oct 10 13:02 log.46676269._028022.job.log.tgz.1
[2025-10-10 13:52:11] -rw-------. 1 boincer umatlas        96 Oct 10 13:03 pilot_heartbeat.json
[2025-10-10 13:52:11] -rw-------. 1 boincer umatlas      7846 Oct 10 13:03 heartbeat.json
[2025-10-10 13:52:11] -rw-------. 1 boincer umatlas      4823 Oct 10 13:03 pilotlog.txt
[2025-10-10 13:52:11] -rw-------. 1 boincer umatlas   4792428 Oct 10 13:04 log.46676269._028022.job.log.1
[2025-10-10 13:52:11] -rw-------. 1 boincer umatlas       357 Oct 10 13:04 output.list
[2025-10-10 13:52:11] -rw-r--r--. 1 boincer umatlas       620 Oct 10 13:04 runtime_log
[2025-10-10 13:52:11] -rw-------. 1 boincer umatlas   5632000 Oct 10 13:04 result.tar.gz
[2025-10-10 13:52:11] -rw-r--r--. 1 boincer umatlas      8781 Oct 10 13:04 runtime_log.err
[2025-10-10 13:52:11] -rw-------. 1 boincer umatlas       786 Oct 10 13:04 NQbKDmkAFR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmouOMDmaMXCOo.diag
[2025-10-10 13:52:11] -rw-r--r--. 1 boincer umatlas      6656 Oct 10 13:49 init_data.xml
[2025-10-10 13:52:11] -rw-r--r--. 1 boincer umatlas        25 Oct 10 13:52 wrapper_checkpoint.txt
[2025-10-10 13:52:11] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 13:52 boinc_mmap_file
[2025-10-10 13:52:11] -rw-r--r--. 1 boincer umatlas     23173 Oct 10 13:52 stderr.txt
[2025-10-10 13:52:11] HITS file was successfully produced:
[2025-10-10 13:52:11] -rw-------. 1 boincer umatlas 194104420 Oct 10 12:57 shared/HITS.pool.root.1
[2025-10-10 13:52:11]  *** Contents of shared directory: ***
[2025-10-10 13:52:11] total 410184
[2025-10-10 13:52:11] -rw-r--r--. 3 boincer umatlas 219696781 Oct 10 00:18 ATLAS.root_0
[2025-10-10 13:52:11] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 00:18 start_atlas.sh
[2025-10-10 13:52:11] -rw-r--r--. 2 boincer umatlas    569684 Oct 10 00:18 input.tar.gz
[2025-10-10 13:52:11] -rw-------. 1 boincer umatlas 194104420 Oct 10 12:57 HITS.pool.root.1
[2025-10-10 13:52:11] -rw-------. 1 boincer umatlas   5632000 Oct 10 13:04 result.tar.gz
13:52:13 (373569): run_atlas exited; CPU time 53865.717920
13:52:13 (373569): called boinc_finish(0)

</stderr_txt>
]]>

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