Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:41 (1643295): wrapper (7.7.26015): starting
00:02:41 (1643295): wrapper: running run_atlas (--nthreads 9)
[2025-10-10 00:02:41] Arguments: --nthreads 9
[2025-10-10 00:02:41] Threads: 9
[2025-10-10 00:02:41] Checking for CVMFS
[2025-10-10 00:02:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 00:02:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 00:02:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 00:02:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 00:02:44] 2.13.2.0 239285 125876 280060 151533 0 553 20267577 32935937 26534 16776704 0 82851499 99.658 78576191 30587 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 00:02:44] CVMFS is ok
[2025-10-10 00:02:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 00:02:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 00:02:44] Further information can be found at the LHC@home message board.
[2025-10-10 00:02:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 00:02:44] Checking for apptainer binary...
[2025-10-10 00:02:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 00:02:44] Running /usr/bin/apptainer --version
[2025-10-10 00:02:44] apptainer version 1.4.3-1.el9
[2025-10-10 00:02:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 00:02:45] c-6-6.aglt2.org
[2025-10-10 00:02:45] apptainer works
[2025-10-10 00:02:45] Set ATHENA_PROC_NUMBER=9
[2025-10-10 00:02:45] Set ATHENA_CORE_NUMBER=9
[2025-10-10 00:02:45] Starting ATLAS job with PandaID=6837331640
[2025-10-10 00:02:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 07:17:47]  *** The last 200 lines of the pilot log: ***
[2025-10-10 07:17:47] 2025-10-10 11:17:06,883 | INFO     | PID=1650756 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 07:17:47] 2025-10-10 11:17:06,884 | INFO     | .. there are 40 such processes running
[2025-10-10 07:17:47] 2025-10-10 11:17:07,693 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 07:17:47] 2025-10-10 11:17:07,700 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1480500000007
[2025-10-10 07:17:47] 2025-10-10 11:17:07,706 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6837331640/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 07:17:47] 2025-10-10 11:17:07,707 | INFO     | extracted standard info from prmon json
[2025-10-10 07:17:47] 2025-10-10 11:17:07,707 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 07:17:47] 2025-10-10 11:17:07,707 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 07:17:47] 2025-10-10 11:17:07,708 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 07:17:47] 2025-10-10 11:17:07,708 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 07:17:47] 2025-10-10 11:17:07,716 | INFO     | fitting pss+swap vs Time
[2025-10-10 07:17:47] 2025-10-10 11:17:07,717 | INFO     | sum of square deviations: 23634351846.490444
[2025-10-10 07:17:47] 2025-10-10 11:17:07,722 | INFO     | sum of deviations: 194122403983.66965
[2025-10-10 07:17:47] 2025-10-10 11:17:07,722 | INFO     | mean x: 1760082056.2547169
[2025-10-10 07:17:47] 2025-10-10 11:17:07,722 | INFO     | mean y: 2265454.7900943398
[2025-10-10 07:17:47] 2025-10-10 11:17:07,722 | INFO     | -- intersect: -14454291771.23014
[2025-10-10 07:17:47] 2025-10-10 11:17:07,723 | INFO     | intersect: -14454291771.23014
[2025-10-10 07:17:47] 2025-10-10 11:17:07,723 | INFO     | chi2: 4.023703932633767
[2025-10-10 07:17:47] 2025-10-10 11:17:07,724 | INFO     | sum of square deviations: 22808167714.004776
[2025-10-10 07:17:47] 2025-10-10 11:17:07,729 | INFO     | sum of deviations: 218985800886.46536
[2025-10-10 07:17:47] 2025-10-10 11:17:07,729 | INFO     | mean x: 1760081903.770883
[2025-10-10 07:17:47] 2025-10-10 11:17:07,729 | INFO     | mean y: 2270001.661097852
[2025-10-10 07:17:47] 2025-10-10 11:17:07,729 | INFO     | -- intersect: -16896629995.745367
[2025-10-10 07:17:47] 2025-10-10 11:17:07,729 | INFO     | intersect: -16896629995.745367
[2025-10-10 07:17:47] 2025-10-10 11:17:07,730 | INFO     | chi2: 3.3337348757786076
[2025-10-10 07:17:47] 2025-10-10 11:17:07,730 | INFO     | current chi2=3.3337348757786076 (change=17.14760997346868 %)
[2025-10-10 07:17:47] 2025-10-10 11:17:07,730 | INFO     | right removable region: 418
[2025-10-10 07:17:47] 2025-10-10 11:17:07,731 | INFO     | sum of square deviations: 22807790975.460705
[2025-10-10 07:17:47] 2025-10-10 11:17:07,735 | INFO     | sum of deviations: 88620877505.73988
[2025-10-10 07:17:47] 2025-10-10 11:17:07,736 | INFO     | mean x: 1760082208.7732697
[2025-10-10 07:17:47] 2025-10-10 11:17:07,736 | INFO     | mean y: 2284894.744630072
[2025-10-10 07:17:47] 2025-10-10 11:17:07,736 | INFO     | -- intersect: -6836607569.306344
[2025-10-10 07:17:47] 2025-10-10 11:17:07,736 | INFO     | intersect: -6836607569.306344
[2025-10-10 07:17:47] 2025-10-10 11:17:07,737 | INFO     | chi2: 1.2717100750340613
[2025-10-10 07:17:47] 2025-10-10 11:17:07,737 | INFO     | current chi2=1.2717100750340613 (change=68.39454153870493 %)
[2025-10-10 07:17:47] 2025-10-10 11:17:07,738 | INFO     | sum of square deviations: 22000872573.055428
[2025-10-10 07:17:47] 2025-10-10 11:17:07,742 | INFO     | sum of deviations: 51912809083.72214
[2025-10-10 07:17:47] 2025-10-10 11:17:07,742 | INFO     | mean x: 1760082361.2777777
[2025-10-10 07:17:47] 2025-10-10 11:17:07,743 | INFO     | mean y: 2291829.263285024
[2025-10-10 07:17:47] 2025-10-10 11:17:07,743 | INFO     | -- intersect: -4150762522.9782896
[2025-10-10 07:17:47] 2025-10-10 11:17:07,743 | INFO     | intersect: -4150762522.9782896
[2025-10-10 07:17:47] 2025-10-10 11:17:07,743 | INFO     | chi2: 0.9795628881055538
[2025-10-10 07:17:47] 2025-10-10 11:17:07,744 | INFO     | current chi2=0.9795628881055538 (change=22.972782292432704 %)
[2025-10-10 07:17:47] 2025-10-10 11:17:07,744 | INFO     | left removable region: 20
[2025-10-10 07:17:47] 2025-10-10 11:17:07,744 | INFO     | sum of square deviations: 19547160848.474808
[2025-10-10 07:17:47] 2025-10-10 11:17:07,748 | INFO     | sum of deviations: 33458993409.10051
[2025-10-10 07:17:47] 2025-10-10 11:17:07,749 | INFO     | mean x: 1760082483.3190954
[2025-10-10 07:17:47] 2025-10-10 11:17:07,749 | INFO     | mean y: 2305732.7236180906
[2025-10-10 07:17:47] 2025-10-10 11:17:07,749 | INFO     | -- intersect: -3010438095.669337
[2025-10-10 07:17:47] 2025-10-10 11:17:07,749 | INFO     | intersect: -3010438095.669337
[2025-10-10 07:17:47] 2025-10-10 11:17:07,750 | INFO     | chi2: 0.037027006652891464
[2025-10-10 07:17:47] 2025-10-10 11:17:07,750 | INFO     | -- intersect: -3010438095.669337
[2025-10-10 07:17:47] 2025-10-10 11:17:07,750 | INFO     | current memory leak: 1.71 B/s (using 398 data points, chi2=0.04)
[2025-10-10 07:17:47] 2025-10-10 11:17:07,751 | INFO     | could have reported an average CPU frequency of 2600 MHz (17 samples)
[2025-10-10 07:17:47] 2025-10-10 11:17:07,751 | INFO     | ..............................
[2025-10-10 07:17:47] 2025-10-10 11:17:07,751 | INFO     | . Timing measurements:
[2025-10-10 07:17:47] 2025-10-10 11:17:07,751 | INFO     | . get job = 0 s
[2025-10-10 07:17:47] 2025-10-10 11:17:07,751 | INFO     | . initial setup = 5 s
[2025-10-10 07:17:47] 2025-10-10 11:17:07,751 | INFO     | . payload setup = 33 s
[2025-10-10 07:17:47] 2025-10-10 11:17:07,751 | INFO     | . stage-in = 0 s
[2025-10-10 07:17:47] 2025-10-10 11:17:07,752 | INFO     | . payload execution = 25864 s
[2025-10-10 07:17:47] 2025-10-10 11:17:07,752 | INFO     | . stage-out = 4 s
[2025-10-10 07:17:47] 2025-10-10 11:17:07,752 | INFO     | . log creation = 0 s
[2025-10-10 07:17:47] 2025-10-10 11:17:07,752 | INFO     | ..............................
[2025-10-10 07:17:47] 2025-10-10 11:17:07,925 | INFO     | time since job start (25999s) is within the limit (172800.0s)
[2025-10-10 07:17:47] 2025-10-10 11:17:08,782 | INFO     | 
[2025-10-10 07:17:47] 2025-10-10 11:17:08,783 | INFO     | job summary report
[2025-10-10 07:17:47] 2025-10-10 11:17:08,783 | INFO     | --------------------------------------------------
[2025-10-10 07:17:47] 2025-10-10 11:17:08,783 | INFO     | PanDA job id: 6837331640
[2025-10-10 07:17:47] 2025-10-10 11:17:08,783 | INFO     | task id: 46676269
[2025-10-10 07:17:47] 2025-10-10 11:17:08,783 | INFO     | errors: (none)
[2025-10-10 07:17:47] 2025-10-10 11:17:08,783 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 07:17:47] 2025-10-10 11:17:08,783 | INFO     | pilot state: finished 
[2025-10-10 07:17:47] 2025-10-10 11:17:08,783 | INFO     | transexitcode: 0
[2025-10-10 07:17:47] 2025-10-10 11:17:08,784 | INFO     | exeerrorcode: 0
[2025-10-10 07:17:47] 2025-10-10 11:17:08,784 | INFO     | exeerrordiag: 
[2025-10-10 07:17:47] 2025-10-10 11:17:08,784 | INFO     | exitcode: 0
[2025-10-10 07:17:47] 2025-10-10 11:17:08,784 | INFO     | exitmsg: OK
[2025-10-10 07:17:47] 2025-10-10 11:17:08,784 | INFO     | cpuconsumptiontime: 48960 s
[2025-10-10 07:17:47] 2025-10-10 11:17:08,784 | INFO     | nevents: 400
[2025-10-10 07:17:47] 2025-10-10 11:17:08,784 | INFO     | neventsw: 0
[2025-10-10 07:17:47] 2025-10-10 11:17:08,784 | INFO     | pid: 1670808
[2025-10-10 07:17:47] 2025-10-10 11:17:08,784 | INFO     | pgrp: 1670808
[2025-10-10 07:17:47] 2025-10-10 11:17:08,784 | INFO     | corecount: 9
[2025-10-10 07:17:47] 2025-10-10 11:17:08,784 | INFO     | event service: False
[2025-10-10 07:17:47] 2025-10-10 11:17:08,785 | INFO     | sizes: {0: 2348855, 1: 2348855, 12: 2348883, 23: 2348911, 27: 2349201, 35: 2349229, 25903: 2384709, 25908: 2393707, 25909: 2393763, 25936: 2394021}
[2025-10-10 07:17:47] 2025-10-10 11:17:08,785 | INFO     | --------------------------------------------------
[2025-10-10 07:17:47] 2025-10-10 11:17:08,785 | INFO     | 
[2025-10-10 07:17:47] 2025-10-10 11:17:08,785 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-10 07:17:47] 2025-10-10 11:17:08,980 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 07:17:47] 2025-10-10 11:17:08,988 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 07:17:47] 2025-10-10 11:17:08,988 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 07:17:47] 2025-10-10 11:17:08,988 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 07:17:47] 2025-10-10 11:17:08,988 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 07:17:47] 2025-10-10 11:17:08,989 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 07:17:47] 2025-10-10 11:17:08,989 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 07:17:47] 2025-10-10 11:17:08,989 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 07:17:47] 2025-10-10 11:17:08,989 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 07:17:47] 2025-10-10 11:17:08,989 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 07:17:47] 2025-10-10 11:17:08,989 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 07:17:47] 2025-10-10 11:17:08,989 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 07:17:47] 2025-10-10 11:17:08,989 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 07:17:47] 2025-10-10 11:17:08,989 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 07:17:47] 2025-10-10 11:17:08,989 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 07:17:47] 2025-10-10 11:17:08,990 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 07:17:47] 2025-10-10 11:17:08,990 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 07:17:47] 2025-10-10 11:17:08,990 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 07:17:47] 2025-10-10 11:17:08,990 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 07:17:47] 2025-10-10 11:17:08,990 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 07:17:47] 2025-10-10 11:17:08,990 | INFO     | job 6837331640 has completed (purged errors)
[2025-10-10 07:17:47] 2025-10-10 11:17:08,990 | INFO     | overall cleanup function is called
[2025-10-10 07:17:47] 2025-10-10 11:17:10,000 | INFO     | --- collectZombieJob: --- 10, [1670808]
[2025-10-10 07:17:47] 2025-10-10 11:17:10,000 | INFO     | zombie collector waiting for pid 1670808
[2025-10-10 07:17:47] 2025-10-10 11:17:10,000 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 07:17:47] 2025-10-10 11:17:10,000 | INFO     | collected zombie processes
[2025-10-10 07:17:47] 2025-10-10 11:17:10,000 | INFO     | will attempt to kill all subprocesses of pid=1670808
[2025-10-10 07:17:47] 2025-10-10 11:17:11,107 | INFO     | process IDs to be killed: [1670808] (in reverse order)
[2025-10-10 07:17:47] 2025-10-10 11:17:11,228 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 07:17:47] 2025-10-10 11:17:11,229 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 07:17:47] 2025-10-10 11:17:11,296 | INFO     | did not find any defunct processes belonging to 1670808
[2025-10-10 07:17:47] 2025-10-10 11:17:11,309 | INFO     | did not find any defunct processes belonging to 1670808
[2025-10-10 07:17:47] 2025-10-10 11:17:11,310 | INFO     | ready for new job
[2025-10-10 07:17:47] 2025-10-10 11:17:11,310 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 07:17:47] 2025-10-10 11:17:11,312 | INFO     | ***************************************
[2025-10-10 07:17:47] 2025-10-10 11:17:11,313 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 07:17:47] 2025-10-10 11:17:11,313 | INFO     | ***************************************
[2025-10-10 07:17:47] 2025-10-10 11:17:11,313 | INFO     | 
[2025-10-10 07:17:47] 2025-10-10 11:17:11,328 | INFO     | architecture information:
[2025-10-10 07:17:47] 2025-10-10 11:17:11,330 | INFO     | executing command: cat /etc/os-release
[2025-10-10 07:17:47] 2025-10-10 11:17:11,370 | INFO     | cat /etc/os-release:
[2025-10-10 07:17:47] NAME="CentOS Linux"
[2025-10-10 07:17:47] VERSION="7 (Core)"
[2025-10-10 07:17:47] ID="centos"
[2025-10-10 07:17:47] ID_LIKE="rhel fedora"
[2025-10-10 07:17:47] VERSION_ID="7"
[2025-10-10 07:17:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 07:17:47] ANSI_COLOR="0;31"
[2025-10-10 07:17:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 07:17:47] HOME_URL="https://www.centos.org/"
[2025-10-10 07:17:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 07:17:47] 
[2025-10-10 07:17:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 07:17:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 07:17:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 07:17:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 07:17:47] 
[2025-10-10 07:17:47] 2025-10-10 11:17:11,370 | INFO     | ***************************************
[2025-10-10 07:17:47] 2025-10-10 11:17:11,885 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-10 07:17:47] 2025-10-10 11:17:11,990 | INFO     | sufficient remaining disk space (75726061568 B)
[2025-10-10 07:17:47] 2025-10-10 11:17:11,991 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 07:17:47] 2025-10-10 11:17:11,991 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 07:17:47] 2025-10-10 11:17:11,991 | INFO     | update_server=False
[2025-10-10 07:17:47] 2025-10-10 11:17:11,991 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 07:17:47] 2025-10-10 11:17:11,991 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 07:17:47] 2025-10-10 11:17:11,992 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 07:17:47] 2025-10-10 11:17:12,430 | INFO     | all data control threads have been joined
[2025-10-10 07:17:47] 2025-10-10 11:17:12,645 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 07:17:47] 2025-10-10 11:17:12,646 | INFO     | aborting loop
[2025-10-10 07:17:47] 2025-10-10 11:17:12,993 | INFO     | all payload control threads have been joined
[2025-10-10 07:17:47] 2025-10-10 11:17:12,997 | INFO     | [job] retrieve thread has finished
[2025-10-10 07:17:47] 2025-10-10 11:17:13,054 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 07:17:47] 2025-10-10 11:17:13,197 | INFO     | [data] copytool_in thread has finished
[2025-10-10 07:17:47] 2025-10-10 11:17:13,222 | INFO     | [payload] validate_post thread has finished
[2025-10-10 07:17:47] 2025-10-10 11:17:13,222 | INFO     | [payload] failed_post thread has finished
[2025-10-10 07:17:47] 2025-10-10 11:17:13,437 | INFO     | [data] control thread has finished
[2025-10-10 07:17:47] 2025-10-10 11:17:13,549 | INFO     | all job control threads have been joined
[2025-10-10 07:17:47] 2025-10-10 11:17:13,652 | INFO     | [job] job monitor thread has finished
[2025-10-10 07:17:47] 2025-10-10 11:17:13,792 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 07:17:47] 2025-10-10 11:17:14,017 | INFO     | [data] copytool_out thread has finished
[2025-10-10 07:17:47] 2025-10-10 11:17:14,017 | INFO     | [payload] control thread has finished
[2025-10-10 07:17:47] 2025-10-10 11:17:14,099 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 07:17:47] 2025-10-10 11:17:14,207 | INFO     | [job] validate thread has finished
[2025-10-10 07:17:47] 2025-10-10 11:17:14,375 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 07:17:47] 2025-10-10 11:17:14,381 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 07:17:47] 2025-10-10 11:17:14,557 | INFO     | [job] control thread has finished
[2025-10-10 07:17:47] 2025-10-10 11:17:14,799 | INFO     | [job] queue monitor thread has finished
[2025-10-10 07:17:47] 2025-10-10 11:17:16,003 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 07:17:47] 2025-10-10 11:17:40,944 | INFO     | [monitor] cgroup control has ended
[2025-10-10 07:17:47] 2025-10-10 11:17:41,962 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140513341577024)>', '<ExcThread(monitor, started 140512984024832)>']
[2025-10-10 07:17:47] 2025-10-10 11:17:43,114 | INFO     | PID=1650756 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 07:17:47] 2025-10-10 11:17:43,114 | INFO     | .. there are 40 such processes running
[2025-10-10 07:17:47] 2025-10-10 11:17:43,115 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 07:17:47] 2025-10-10 11:17:43,116 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 07:17:47] 2025-10-10 11:17:43,116 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 07:17:47] 2025-10-10 11:17:43,116 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 07:17:47] 2025-10-10 11:17:43,116 | INFO     | [monitor] control thread has ended
[2025-10-10 07:17:47] 2025-10-10 11:17:46,988 | INFO     | all workflow threads have been joined
[2025-10-10 07:17:47] 2025-10-10 11:17:46,994 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 07:17:47] 2025-10-10 11:17:46,995 | INFO     | traces error code: 0
[2025-10-10 07:17:47] 2025-10-10 11:17:46,995 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 07:17:47] 2025-10-10 11:17:47,284 [wrapper] ==== pilot stdout END ====
[2025-10-10 07:17:47] 2025-10-10 11:17:47,291 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 07:17:47] 2025-10-10 11:17:47,294 [wrapper] pilotpid: 1650756
[2025-10-10 07:17:47] 2025-10-10 11:17:47,300 [wrapper] Pilot exit status: 0
[2025-10-10 07:17:47] 2025-10-10 11:17:47,316 [wrapper] pandaids: 6837331640
[2025-10-10 07:17:47] 2025-10-10 11:17:47,407 [wrapper] cleanup supervisor_pilot 3134063 1650757
[2025-10-10 07:17:47] 2025-10-10 11:17:47,410 [wrapper] Test setup, not cleaning
[2025-10-10 07:17:47] 2025-10-10 11:17:47,419 [wrapper] apfmon messages muted
[2025-10-10 07:17:47] 2025-10-10 11:17:47,423 [wrapper] ==== wrapper stdout END ====
[2025-10-10 07:17:47] 2025-10-10 11:17:47,426 [wrapper] ==== wrapper stderr END ====
[2025-10-10 07:17:47]  *** Error codes and diagnostics ***
[2025-10-10 07:17:47]     "exeErrorCode": 0,
[2025-10-10 07:17:47]     "exeErrorDiag": "",
[2025-10-10 07:17:47]     "pilotErrorCode": 0,
[2025-10-10 07:17:47]     "pilotErrorDiag": "",
[2025-10-10 07:17:47]  *** Listing of results directory ***
[2025-10-10 07:17:47] total 414804
[2025-10-10 07:17:47] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 06:51 queuedata.json
[2025-10-10 07:17:47] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 06:52 pilot3.tar.gz
[2025-10-10 07:17:47] -rwx------. 1 boincer umatlas     36292 Oct  9 06:55 runpilot2-wrapper.sh
[2025-10-10 07:17:47] -rw-r--r--. 1 boincer umatlas       100 Oct 10 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 07:17:47] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 00:02 run_atlas
[2025-10-10 07:17:47] -rw-r--r--. 1 boincer umatlas       105 Oct 10 00:02 job.xml
[2025-10-10 07:17:47] -rw-r--r--. 2 boincer umatlas 222898244 Oct 10 00:02 EVNT.46676267._000614.pool.root.1
[2025-10-10 07:17:47] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 00:02 start_atlas.sh
[2025-10-10 07:17:47] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 00:02 shared
[2025-10-10 07:17:47] -rw-r--r--. 2 boincer umatlas    569676 Oct 10 00:02 input.tar.gz
[2025-10-10 07:17:47] -rw-r--r--. 1 boincer umatlas         0 Oct 10 00:02 boinc_lockfile
[2025-10-10 07:17:47] -rw-r--r--. 1 boincer umatlas      2549 Oct 10 00:02 pandaJob.out
[2025-10-10 07:17:47] -rw-------. 1 boincer umatlas    975454 Oct 10 00:03 agis_schedconf.cvmfs.json
[2025-10-10 07:17:47] drwx------. 5 boincer umatlas      4096 Oct 10 00:03 pilot3
[2025-10-10 07:17:47] -rw-r--r--. 1 boincer umatlas      6656 Oct 10 07:10 init_data.xml
[2025-10-10 07:17:47] -rw-------. 1 boincer umatlas 190909549 Oct 10 07:15 HITS.46676269._014956.pool.root.1
[2025-10-10 07:17:47] -rw-r--r--. 1 boincer umatlas       530 Oct 10 07:15 boinc_task_state.xml
[2025-10-10 07:17:47] -rw-------. 1 boincer umatlas      1042 Oct 10 07:16 memory_monitor_summary.json
[2025-10-10 07:17:47] -rw-------. 1 boincer umatlas   1560580 Oct 10 07:16 agis_ddmendpoints.agis.ALL.json
[2025-10-10 07:17:47] -rw-------. 1 boincer umatlas    591208 Oct 10 07:16 log.46676269._014956.job.log.tgz.1
[2025-10-10 07:17:47] -rw-------. 1 boincer umatlas      7822 Oct 10 07:17 heartbeat.json
[2025-10-10 07:17:47] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 07:17 boinc_mmap_file
[2025-10-10 07:17:47] -rw-r--r--. 1 boincer umatlas        27 Oct 10 07:17 wrapper_checkpoint.txt
[2025-10-10 07:17:47] -rw-------. 1 boincer umatlas        95 Oct 10 07:17 pilot_heartbeat.json
[2025-10-10 07:17:47] -rw-------. 1 boincer umatlas      4824 Oct 10 07:17 pilotlog.txt
[2025-10-10 07:17:47] -rw-------. 1 boincer umatlas   2930219 Oct 10 07:17 log.46676269._014956.job.log.1
[2025-10-10 07:17:47] -rw-------. 1 boincer umatlas       357 Oct 10 07:17 output.list
[2025-10-10 07:17:47] -rw-r--r--. 1 boincer umatlas       620 Oct 10 07:17 runtime_log
[2025-10-10 07:17:47] -rw-------. 1 boincer umatlas   3543040 Oct 10 07:17 result.tar.gz
[2025-10-10 07:17:47] -rw-r--r--. 1 boincer umatlas      8689 Oct 10 07:17 runtime_log.err
[2025-10-10 07:17:47] -rw-------. 1 boincer umatlas       654 Oct 10 07:17 8NxMDmcU3Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmRgNMDmRHEPSn.diag
[2025-10-10 07:17:47] -rw-r--r--. 1 boincer umatlas     21305 Oct 10 07:17 stderr.txt
[2025-10-10 07:17:47] HITS file was successfully produced:
[2025-10-10 07:17:47] -rw-------. 1 boincer umatlas 190909549 Oct 10 07:15 shared/HITS.pool.root.1
[2025-10-10 07:17:47]  *** Contents of shared directory: ***
[2025-10-10 07:17:47] total 408156
[2025-10-10 07:17:47] -rw-r--r--. 2 boincer umatlas 222898244 Oct 10 00:02 ATLAS.root_0
[2025-10-10 07:17:47] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 00:02 start_atlas.sh
[2025-10-10 07:17:47] -rw-r--r--. 2 boincer umatlas    569676 Oct 10 00:02 input.tar.gz
[2025-10-10 07:17:47] -rw-------. 1 boincer umatlas 190909549 Oct 10 07:15 HITS.pool.root.1
[2025-10-10 07:17:47] -rw-------. 1 boincer umatlas   3543040 Oct 10 07:17 result.tar.gz
07:17:48 (1643295): run_atlas exited; CPU time 49943.762480
07:17:48 (1643295): called boinc_finish(0)

</stderr_txt>
]]>

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