Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:47 (2491813): wrapper (7.7.26015): starting
00:02:47 (2491813): wrapper: running run_atlas (--nthreads 9)
[2025-10-10 00:02:47] Arguments: --nthreads 9
[2025-10-10 00:02:47] Threads: 9
[2025-10-10 00:02:47] Checking for CVMFS
[2025-10-10 00:02:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 00:02:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 00:02:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 00:02:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 00:02:50] 2.13.2.0 4177459 125876 243368 151533 1 637 22567910 32935937 26991 16776704 0 101206450 99.672 86606072 29905 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 00:02:50] CVMFS is ok
[2025-10-10 00:02:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 00:02:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 00:02:50] Further information can be found at the LHC@home message board.
[2025-10-10 00:02:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 00:02:50] Checking for apptainer binary...
[2025-10-10 00:02:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 00:02:50] Running /usr/bin/apptainer --version
[2025-10-10 00:02:50] apptainer version 1.4.3-1.el9
[2025-10-10 00:02:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 00:02:51] c-8-1.aglt2.org
[2025-10-10 00:02:51] apptainer works
[2025-10-10 00:02:51] Set ATHENA_PROC_NUMBER=9
[2025-10-10 00:02:51] Set ATHENA_CORE_NUMBER=9
[2025-10-10 00:02:51] Starting ATLAS job with PandaID=6837365258
[2025-10-10 00:02:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 19:29:27]  *** The last 200 lines of the pilot log: ***
[2025-10-10 19:29:27] 2025-10-10 23:28:36,167 | INFO     | time since job start (69884s) is within the limit (172800.0s)
[2025-10-10 19:29:27] 2025-10-10 23:28:37,039 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 19:29:27] 2025-10-10 23:28:37,111 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1804499999976
[2025-10-10 19:29:27] 2025-10-10 23:28:37,180 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6837365258/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 19:29:27] 2025-10-10 23:28:37,181 | INFO     | extracted standard info from prmon json
[2025-10-10 19:29:27] 2025-10-10 23:28:37,181 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 19:29:27] 2025-10-10 23:28:37,181 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 19:29:27] 2025-10-10 23:28:37,218 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 19:29:27] 2025-10-10 23:28:37,218 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 19:29:27] 2025-10-10 23:28:37,345 | INFO     | fitting pss+swap vs Time
[2025-10-10 19:29:27] 2025-10-10 23:28:37,374 | INFO     | sum of square deviations: 464247021640.13617
[2025-10-10 19:29:27] 2025-10-10 23:28:37,407 | INFO     | sum of deviations: 855035260617.5892
[2025-10-10 19:29:27] 2025-10-10 23:28:37,407 | INFO     | mean x: 1760104014.2954545
[2025-10-10 19:29:27] 2025-10-10 23:28:37,407 | INFO     | mean y: 2402622.2674825173
[2025-10-10 19:29:27] 2025-10-10 23:28:37,407 | INFO     | -- intersect: -3239300446.1988363
[2025-10-10 19:29:27] 2025-10-10 23:28:37,408 | INFO     | intersect: -3239300446.1988363
[2025-10-10 19:29:27] 2025-10-10 23:28:37,409 | INFO     | chi2: 5.543719606536574
[2025-10-10 19:29:27] 2025-10-10 23:28:37,411 | INFO     | sum of square deviations: 458186469362.15106
[2025-10-10 19:29:27] 2025-10-10 23:28:37,443 | INFO     | sum of deviations: 992179500230.5175
[2025-10-10 19:29:27] 2025-10-10 23:28:37,443 | INFO     | mean x: 1760103861.7971904
[2025-10-10 19:29:27] 2025-10-10 23:28:37,443 | INFO     | mean y: 2406064.036874451
[2025-10-10 19:29:27] 2025-10-10 23:28:37,443 | INFO     | -- intersect: -3809009345.900585
[2025-10-10 19:29:27] 2025-10-10 23:28:37,444 | INFO     | intersect: -3809009345.900585
[2025-10-10 19:29:27] 2025-10-10 23:28:37,445 | INFO     | chi2: 4.1741395012407025
[2025-10-10 19:29:27] 2025-10-10 23:28:37,445 | INFO     | current chi2=4.1741395012407025 (change=24.70507533752259 %)
[2025-10-10 19:29:27] 2025-10-10 23:28:37,445 | INFO     | right removable region: 1138
[2025-10-10 19:29:27] 2025-10-10 23:28:37,447 | INFO     | sum of square deviations: 458186332355.33563
[2025-10-10 19:29:27] 2025-10-10 23:28:37,479 | INFO     | sum of deviations: 552129407837.3309
[2025-10-10 19:29:27] 2025-10-10 23:28:37,479 | INFO     | mean x: 1760104166.7954345
[2025-10-10 19:29:27] 2025-10-10 23:28:37,480 | INFO     | mean y: 2410238.563652327
[2025-10-10 19:29:27] 2025-10-10 23:28:37,480 | INFO     | -- intersect: -2118572433.1567283
[2025-10-10 19:29:27] 2025-10-10 23:28:37,480 | INFO     | intersect: -2118572433.1567283
[2025-10-10 19:29:27] 2025-10-10 23:28:37,481 | INFO     | chi2: 2.6943583439221896
[2025-10-10 19:29:27] 2025-10-10 23:28:37,482 | INFO     | current chi2=2.6943583439221896 (change=51.39800467640383 %)
[2025-10-10 19:29:27] 2025-10-10 23:28:37,483 | INFO     | sum of square deviations: 452178482094.85114
[2025-10-10 19:29:27] 2025-10-10 23:28:37,515 | INFO     | sum of deviations: 414300014057.7423
[2025-10-10 19:29:27] 2025-10-10 23:28:37,515 | INFO     | mean x: 1760104319.297178
[2025-10-10 19:29:27] 2025-10-10 23:28:37,515 | INFO     | mean y: 2413737.294532628
[2025-10-10 19:29:27] 2025-10-10 23:28:37,515 | INFO     | -- intersect: -1610248680.5401819
[2025-10-10 19:29:27] 2025-10-10 23:28:37,515 | INFO     | intersect: -1610248680.5401819
[2025-10-10 19:29:27] 2025-10-10 23:28:37,517 | INFO     | chi2: 2.1816062941813463
[2025-10-10 19:29:27] 2025-10-10 23:28:37,517 | INFO     | current chi2=2.1816062941813463 (change=19.030581099113483 %)
[2025-10-10 19:29:27] 2025-10-10 23:28:37,517 | INFO     | left removable region: 20
[2025-10-10 19:29:27] 2025-10-10 23:28:37,519 | INFO     | sum of square deviations: 433307157551.41833
[2025-10-10 19:29:27] 2025-10-10 23:28:37,550 | INFO     | sum of deviations: 334952425397.945
[2025-10-10 19:29:27] 2025-10-10 23:28:37,550 | INFO     | mean x: 1760104441.3014312
[2025-10-10 19:29:27] 2025-10-10 23:28:37,550 | INFO     | mean y: 2422859.4096601075
[2025-10-10 19:29:27] 2025-10-10 23:28:37,550 | INFO     | -- intersect: -1358162215.8499155
[2025-10-10 19:29:27] 2025-10-10 23:28:37,551 | INFO     | intersect: -1358162215.8499155
[2025-10-10 19:29:27] 2025-10-10 23:28:37,552 | INFO     | chi2: 0.10232631492644624
[2025-10-10 19:29:27] 2025-10-10 23:28:37,552 | INFO     | -- intersect: -1358162215.8499155
[2025-10-10 19:29:27] 2025-10-10 23:28:37,552 | INFO     | current memory leak: 0.77 B/s (using 1118 data points, chi2=0.10)
[2025-10-10 19:29:27] 2025-10-10 23:28:37,553 | INFO     | could have reported an average CPU frequency of 2600 MHz (41 samples)
[2025-10-10 19:29:27] 2025-10-10 23:28:37,554 | INFO     | ..............................
[2025-10-10 19:29:27] 2025-10-10 23:28:37,554 | INFO     | . Timing measurements:
[2025-10-10 19:29:27] 2025-10-10 23:28:37,554 | INFO     | . get job = 0 s
[2025-10-10 19:29:27] 2025-10-10 23:28:37,554 | INFO     | . initial setup = 7 s
[2025-10-10 19:29:27] 2025-10-10 23:28:37,554 | INFO     | . payload setup = 34 s
[2025-10-10 19:29:27] 2025-10-10 23:28:37,554 | INFO     | . stage-in = 0 s
[2025-10-10 19:29:27] 2025-10-10 23:28:37,554 | INFO     | . payload execution = 69751 s
[2025-10-10 19:29:27] 2025-10-10 23:28:37,555 | INFO     | . stage-out = 6 s
[2025-10-10 19:29:27] 2025-10-10 23:28:37,555 | INFO     | . log creation = 1 s
[2025-10-10 19:29:27] 2025-10-10 23:28:37,555 | INFO     | ..............................
[2025-10-10 19:29:27] 2025-10-10 23:28:37,920 | INFO     | 
[2025-10-10 19:29:27] 2025-10-10 23:28:37,920 | INFO     | job summary report
[2025-10-10 19:29:27] 2025-10-10 23:28:37,920 | INFO     | --------------------------------------------------
[2025-10-10 19:29:27] 2025-10-10 23:28:37,920 | INFO     | PanDA job id: 6837365258
[2025-10-10 19:29:27] 2025-10-10 23:28:37,920 | INFO     | task id: 46676269
[2025-10-10 19:29:27] 2025-10-10 23:28:37,920 | INFO     | errors: (none)
[2025-10-10 19:29:27] 2025-10-10 23:28:37,920 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 19:29:27] 2025-10-10 23:28:37,921 | INFO     | pilot state: finished 
[2025-10-10 19:29:27] 2025-10-10 23:28:37,921 | INFO     | transexitcode: 0
[2025-10-10 19:29:27] 2025-10-10 23:28:37,921 | INFO     | exeerrorcode: 0
[2025-10-10 19:29:27] 2025-10-10 23:28:37,921 | INFO     | exeerrordiag: 
[2025-10-10 19:29:27] 2025-10-10 23:28:37,921 | INFO     | exitcode: 0
[2025-10-10 19:29:27] 2025-10-10 23:28:37,921 | INFO     | exitmsg: OK
[2025-10-10 19:29:27] 2025-10-10 23:28:37,921 | INFO     | cpuconsumptiontime: 51094 s
[2025-10-10 19:29:27] 2025-10-10 23:28:37,921 | INFO     | nevents: 400
[2025-10-10 19:29:27] 2025-10-10 23:28:37,921 | INFO     | neventsw: 0
[2025-10-10 19:29:27] 2025-10-10 23:28:37,921 | INFO     | pid: 2534485
[2025-10-10 19:29:27] 2025-10-10 23:28:37,922 | INFO     | pgrp: 2534485
[2025-10-10 19:29:27] 2025-10-10 23:28:37,922 | INFO     | corecount: 9
[2025-10-10 19:29:27] 2025-10-10 23:28:37,922 | INFO     | event service: False
[2025-10-10 19:29:27] 2025-10-10 23:28:37,922 | INFO     | sizes: {0: 2348029, 2: 2348714, 3: 2348714, 5: 2348913, 6: 2348969, 7: 2348997, 18: 2349153, 30: 2349181, 33: 2349471, 42: 2349527, 69788: 2404652, 69795: 2413650,
[2025-10-10 19:29:27] 2025-10-10 23:28:37,922 | INFO     | --------------------------------------------------
[2025-10-10 19:29:27] 2025-10-10 23:28:37,922 | INFO     | 
[2025-10-10 19:29:27] 2025-10-10 23:28:37,922 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-10 19:29:27] 2025-10-10 23:28:38,123 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 19:29:27] 2025-10-10 23:28:38,123 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 19:29:27] 2025-10-10 23:28:38,123 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 19:29:27] 2025-10-10 23:28:38,123 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 19:29:27] 2025-10-10 23:28:38,123 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 19:29:27] 2025-10-10 23:28:38,123 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 19:29:27] 2025-10-10 23:28:38,124 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 19:29:27] 2025-10-10 23:28:38,124 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 19:29:27] 2025-10-10 23:28:38,124 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 19:29:27] 2025-10-10 23:28:38,124 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 19:29:27] 2025-10-10 23:28:38,124 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 19:29:27] 2025-10-10 23:28:38,124 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 19:29:27] 2025-10-10 23:28:38,124 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 19:29:27] 2025-10-10 23:28:38,124 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 19:29:27] 2025-10-10 23:28:38,124 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 19:29:27] 2025-10-10 23:28:38,125 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 19:29:27] 2025-10-10 23:28:38,125 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 19:29:27] 2025-10-10 23:28:38,125 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 19:29:27] 2025-10-10 23:28:38,125 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 19:29:27] 2025-10-10 23:28:38,125 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 19:29:27] 2025-10-10 23:28:38,125 | INFO     | job 6837365258 has completed (purged errors)
[2025-10-10 19:29:27] 2025-10-10 23:28:38,136 | INFO     | overall cleanup function is called
[2025-10-10 19:29:27] 2025-10-10 23:28:39,161 | INFO     | --- collectZombieJob: --- 10, [2534485]
[2025-10-10 19:29:27] 2025-10-10 23:28:39,162 | INFO     | zombie collector waiting for pid 2534485
[2025-10-10 19:29:27] 2025-10-10 23:28:39,162 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 19:29:27] 2025-10-10 23:28:39,162 | INFO     | collected zombie processes
[2025-10-10 19:29:27] 2025-10-10 23:28:39,162 | INFO     | will attempt to kill all subprocesses of pid=2534485
[2025-10-10 19:29:27] 2025-10-10 23:28:39,929 | INFO     | process IDs to be killed: [2534485] (in reverse order)
[2025-10-10 19:29:27] 2025-10-10 23:28:40,063 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 19:29:27] 2025-10-10 23:28:40,063 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 19:29:27] 2025-10-10 23:28:40,078 | INFO     | did not find any defunct processes belonging to 2534485
[2025-10-10 19:29:27] 2025-10-10 23:28:40,094 | INFO     | did not find any defunct processes belonging to 2534485
[2025-10-10 19:29:27] 2025-10-10 23:28:40,095 | INFO     | ready for new job
[2025-10-10 19:29:27] 2025-10-10 23:28:40,095 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 19:29:27] 2025-10-10 23:28:40,100 | INFO     | ***************************************
[2025-10-10 19:29:27] 2025-10-10 23:28:40,100 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 19:29:27] 2025-10-10 23:28:40,100 | INFO     | ***************************************
[2025-10-10 19:29:27] 2025-10-10 23:28:40,100 | INFO     | 
[2025-10-10 19:29:27] 2025-10-10 23:28:40,115 | INFO     | architecture information:
[2025-10-10 19:29:27] 2025-10-10 23:28:40,117 | INFO     | executing command: cat /etc/os-release
[2025-10-10 19:29:27] 2025-10-10 23:28:40,147 | INFO     | cat /etc/os-release:
[2025-10-10 19:29:27] NAME="CentOS Linux"
[2025-10-10 19:29:27] VERSION="7 (Core)"
[2025-10-10 19:29:27] ID="centos"
[2025-10-10 19:29:27] ID_LIKE="rhel fedora"
[2025-10-10 19:29:27] VERSION_ID="7"
[2025-10-10 19:29:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 19:29:27] ANSI_COLOR="0;31"
[2025-10-10 19:29:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 19:29:27] HOME_URL="https://www.centos.org/"
[2025-10-10 19:29:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 19:29:27] 
[2025-10-10 19:29:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 19:29:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 19:29:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 19:29:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 19:29:27] 
[2025-10-10 19:29:27] 2025-10-10 23:28:40,147 | INFO     | ***************************************
[2025-10-10 19:29:27] 2025-10-10 23:28:40,651 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-10 19:29:27] 2025-10-10 23:28:40,761 | INFO     | sufficient remaining disk space (75257348096 B)
[2025-10-10 19:29:27] 2025-10-10 23:28:40,771 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 19:29:27] 2025-10-10 23:28:40,771 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 19:29:27] 2025-10-10 23:28:40,772 | INFO     | update_server=False
[2025-10-10 19:29:27] 2025-10-10 23:28:40,772 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 19:29:27] 2025-10-10 23:28:40,775 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 19:29:27] 2025-10-10 23:28:40,840 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 19:29:27] 2025-10-10 23:28:40,844 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 19:29:27] 2025-10-10 23:28:40,844 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 19:29:27] 2025-10-10 23:28:40,844 | INFO     | will abort loop
[2025-10-10 19:29:27] 2025-10-10 23:28:41,208 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 19:29:27] 2025-10-10 23:28:41,590 | INFO     | all data control threads have been joined
[2025-10-10 19:29:27] 2025-10-10 23:28:41,701 | INFO     | all payload control threads have been joined
[2025-10-10 19:29:27] 2025-10-10 23:28:41,779 | INFO     | [job] retrieve thread has finished
[2025-10-10 19:29:27] 2025-10-10 23:28:41,855 | INFO     | [job] job monitor thread has finished
[2025-10-10 19:29:27] 2025-10-10 23:28:42,029 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 19:29:27] 2025-10-10 23:28:42,291 | INFO     | all job control threads have been joined
[2025-10-10 19:29:27] 2025-10-10 23:28:42,326 | INFO     | [payload] failed_post thread has finished
[2025-10-10 19:29:27] 2025-10-10 23:28:42,368 | INFO     | [payload] validate_post thread has finished
[2025-10-10 19:29:27] 2025-10-10 23:28:42,548 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 19:29:27] 2025-10-10 23:28:42,602 | INFO     | [data] control thread has finished
[2025-10-10 19:29:27] 2025-10-10 23:28:42,710 | INFO     | [payload] control thread has finished
[2025-10-10 19:29:27] 2025-10-10 23:28:42,728 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 19:29:27] 2025-10-10 23:28:42,783 | INFO     | [data] copytool_out thread has finished
[2025-10-10 19:29:27] 2025-10-10 23:28:42,833 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 19:29:27] 2025-10-10 23:28:42,945 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 19:29:27] 2025-10-10 23:28:42,957 | INFO     | [job] validate thread has finished
[2025-10-10 19:29:27] 2025-10-10 23:28:43,048 | INFO     | [data] copytool_in thread has finished
[2025-10-10 19:29:27] 2025-10-10 23:28:43,302 | INFO     | [job] control thread has finished
[2025-10-10 19:29:27] 2025-10-10 23:28:43,846 | INFO     | [job] queue monitor thread has finished
[2025-10-10 19:29:27] 2025-10-10 23:28:45,217 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 19:29:27] 2025-10-10 23:29:09,956 | INFO     | PID=2503895 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 19:29:27] 2025-10-10 23:29:09,957 | INFO     | .. there are 40 such processes running
[2025-10-10 19:29:27] 2025-10-10 23:29:09,957 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 19:29:27] 2025-10-10 23:29:09,958 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 19:29:27] 2025-10-10 23:29:09,958 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 19:29:27] 2025-10-10 23:29:20,805 | INFO     | [monitor] cgroup control has ended
[2025-10-10 19:29:27] 2025-10-10 23:29:21,702 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140599377147712)>', '<ExcThread(monitor, started 140598304569088)>']
[2025-10-10 19:29:27] 2025-10-10 23:29:22,029 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 19:29:27] 2025-10-10 23:29:22,030 | INFO     | [monitor] control thread has ended
[2025-10-10 19:29:27] 2025-10-10 23:29:26,728 | INFO     | all workflow threads have been joined
[2025-10-10 19:29:27] 2025-10-10 23:29:26,751 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 19:29:27] 2025-10-10 23:29:26,752 | INFO     | traces error code: 0
[2025-10-10 19:29:27] 2025-10-10 23:29:26,752 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 19:29:27] 2025-10-10 23:29:27,090 [wrapper] ==== pilot stdout END ====
[2025-10-10 19:29:27] 2025-10-10 23:29:27,093 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 19:29:27] 2025-10-10 23:29:27,096 [wrapper] pilotpid: 2503895
[2025-10-10 19:29:27] 2025-10-10 23:29:27,098 [wrapper] Pilot exit status: 0
[2025-10-10 19:29:27] 2025-10-10 23:29:27,156 [wrapper] pandaids: 6837365258
[2025-10-10 19:29:27] 2025-10-10 23:29:27,248 [wrapper] cleanup supervisor_pilot 2120733 2503896
[2025-10-10 19:29:27] 2025-10-10 23:29:27,252 [wrapper] Test setup, not cleaning
[2025-10-10 19:29:27] 2025-10-10 23:29:27,255 [wrapper] apfmon messages muted
[2025-10-10 19:29:27] 2025-10-10 23:29:27,257 [wrapper] ==== wrapper stdout END ====
[2025-10-10 19:29:27] 2025-10-10 23:29:27,273 [wrapper] ==== wrapper stderr END ====
[2025-10-10 19:29:27]  *** Error codes and diagnostics ***
[2025-10-10 19:29:27]     "exeErrorCode": 0,
[2025-10-10 19:29:27]     "exeErrorDiag": "",
[2025-10-10 19:29:27]     "pilotErrorCode": 0,
[2025-10-10 19:29:27]     "pilotErrorDiag": "",
[2025-10-10 19:29:27]  *** Listing of results directory ***
[2025-10-10 19:29:27] total 422588
[2025-10-10 19:29:27] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 18:39 pilot3.tar.gz
[2025-10-10 19:29:27] -rwx------. 1 boincer umatlas     36292 Oct  9 18:49 runpilot2-wrapper.sh
[2025-10-10 19:29:27] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 18:49 queuedata.json
[2025-10-10 19:29:27] -rw-r--r--. 1 boincer umatlas       100 Oct 10 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 19:29:27] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 00:02 run_atlas
[2025-10-10 19:29:27] -rw-r--r--. 1 boincer umatlas       105 Oct 10 00:02 job.xml
[2025-10-10 19:29:27] -rw-r--r--. 2 boincer umatlas 218512127 Oct 10 00:02 EVNT.46676267._001158.pool.root.1
[2025-10-10 19:29:27] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 00:02 start_atlas.sh
[2025-10-10 19:29:27] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 00:02 shared
[2025-10-10 19:29:27] -rw-r--r--. 2 boincer umatlas    569677 Oct 10 00:02 input.tar.gz
[2025-10-10 19:29:27] -rw-r--r--. 1 boincer umatlas         0 Oct 10 00:02 boinc_lockfile
[2025-10-10 19:29:27] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 00:02 pandaJob.out
[2025-10-10 19:29:27] -rw-------. 1 boincer umatlas    975454 Oct 10 00:03 agis_schedconf.cvmfs.json
[2025-10-10 19:29:27] drwx------. 5 boincer umatlas      4096 Oct 10 00:03 pilot3
[2025-10-10 19:29:27] -rw-r--r--. 1 boincer umatlas      6656 Oct 10 19:18 init_data.xml
[2025-10-10 19:29:27] -rw-------. 1 boincer umatlas 192492111 Oct 10 19:26 HITS.46676269._027568.pool.root.1
[2025-10-10 19:29:27] -rw-r--r--. 1 boincer umatlas       530 Oct 10 19:26 boinc_task_state.xml
[2025-10-10 19:29:27] -rw-------. 1 boincer umatlas      1053 Oct 10 19:28 memory_monitor_summary.json
[2025-10-10 19:29:27] -rw-------. 1 boincer umatlas   1560580 Oct 10 19:28 agis_ddmendpoints.agis.ALL.json
[2025-10-10 19:29:27] -rw-------. 1 boincer umatlas   1129170 Oct 10 19:28 log.46676269._027568.job.log.tgz.1
[2025-10-10 19:29:27] -rw-------. 1 boincer umatlas        95 Oct 10 19:28 pilot_heartbeat.json
[2025-10-10 19:29:27] -rw-------. 1 boincer umatlas      7835 Oct 10 19:28 heartbeat.json
[2025-10-10 19:29:27] -rw-------. 1 boincer umatlas      5010 Oct 10 19:29 pilotlog.txt
[2025-10-10 19:29:27] -rw-r--r--. 1 boincer umatlas        27 Oct 10 19:29 wrapper_checkpoint.txt
[2025-10-10 19:29:27] -rw-------. 1 boincer umatlas   7779954 Oct 10 19:29 log.46676269._027568.job.log.1
[2025-10-10 19:29:27] -rw-------. 1 boincer umatlas       357 Oct 10 19:29 output.list
[2025-10-10 19:29:27] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 19:29 boinc_mmap_file
[2025-10-10 19:29:27] -rw-r--r--. 1 boincer umatlas       620 Oct 10 19:29 runtime_log
[2025-10-10 19:29:27] -rw-------. 1 boincer umatlas   8929280 Oct 10 19:29 result.tar.gz
[2025-10-10 19:29:27] -rw-r--r--. 1 boincer umatlas      8689 Oct 10 19:29 runtime_log.err
[2025-10-10 19:29:27] -rw-------. 1 boincer umatlas       659 Oct 10 19:29 OaoNDmucER8n9Rq4apOajLDm4fhM0noT9bVof3QYDmnsOMDm4Nz1rm.diag
[2025-10-10 19:29:27] -rw-r--r--. 1 boincer umatlas     21235 Oct 10 19:29 stderr.txt
[2025-10-10 19:29:27] HITS file was successfully produced:
[2025-10-10 19:29:27] -rw-------. 1 boincer umatlas 192492111 Oct 10 19:26 shared/HITS.pool.root.1
[2025-10-10 19:29:27]  *** Contents of shared directory: ***
[2025-10-10 19:29:27] total 410680
[2025-10-10 19:29:27] -rw-r--r--. 2 boincer umatlas 218512127 Oct 10 00:02 ATLAS.root_0
[2025-10-10 19:29:27] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 00:02 start_atlas.sh
[2025-10-10 19:29:27] -rw-r--r--. 2 boincer umatlas    569677 Oct 10 00:02 input.tar.gz
[2025-10-10 19:29:27] -rw-------. 1 boincer umatlas 192492111 Oct 10 19:26 HITS.pool.root.1
[2025-10-10 19:29:27] -rw-------. 1 boincer umatlas   8929280 Oct 10 19:29 result.tar.gz
19:29:29 (2491813): run_atlas exited; CPU time 53781.814705
19:29:29 (2491813): called boinc_finish(0)

</stderr_txt>
]]>

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