Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:50:10 (3010804): wrapper (7.7.26015): starting
01:50:10 (3010804): wrapper: running run_atlas (--nthreads 6)
[2025-10-11 01:50:10] Arguments: --nthreads 6
[2025-10-11 01:50:10] Threads: 6
[2025-10-11 01:50:10] Checking for CVMFS
[2025-10-11 01:50:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 01:50:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 01:50:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 01:50:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 01:50:10] 2.13.1.0 2207704 1206 65388 151555 2 57 30486003 52428800 922 130560 0 2464603 99.996 45219 135 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 01:50:10] CVMFS is ok
[2025-10-11 01:50:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 01:50:10] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 01:50:10] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 01:50:10] Further information can be found at the LHC@home message board.
[2025-10-11 01:50:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 01:50:10] Checking for apptainer binary...
[2025-10-11 01:50:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 01:50:10] Running /usr/bin/apptainer --version
[2025-10-11 01:50:10] apptainer version 1.4.1-1.el9
[2025-10-11 01:50:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 01:50:10] Atto003
[2025-10-11 01:50:10] apptainer works
[2025-10-11 01:50:10] Set ATHENA_PROC_NUMBER=6
[2025-10-11 01:50:10] Set ATHENA_CORE_NUMBER=6
[2025-10-11 01:50:10] Starting ATLAS job with PandaID=6827234317
[2025-10-11 01:50:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 03:01:38]  *** The last 200 lines of the pilot log: ***
[2025-10-11 03:01:38]  storage_token=
[2025-10-11 03:01:38]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6827234317/log.46376905._027629.job.log.tgz.1
[2025-10-11 03:01:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/31/6b/log.46376905._027629.job.log.tgz.1
[2025-10-11 03:01:38]  workdir=None
[2025-10-11 03:01:38] ]
[2025-10-11 03:01:38] 2025-10-10 18:00:56,442 | INFO     | transferring file log.46376905._027629.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6827234317/log.46376905._027629.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-11 03:01:38] 2025-10-10 18:00:56,442 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6827234317/log.46376905._027629.job.log.tgz.1 /var/lib/boinc/slots/1/log.46376905._027629.job
[2025-10-11 03:01:38] 2025-10-10 18:00:56,450 | INFO     | adding to output.list: log.46376905._027629.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/31/6b/log.46376905._027629.job.log.tg
[2025-10-11 03:01:38] 2025-10-10 18:00:56,451 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 03:01:38] 2025-10-10 18:00:56,451 | INFO     | summary of transferred files:
[2025-10-11 03:01:38] 2025-10-10 18:00:56,451 | INFO     |  -- lfn=log.46376905._027629.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 03:01:38] 2025-10-10 18:00:56,451 | INFO     | stage-out finished correctly
[2025-10-11 03:01:38] 2025-10-10 18:00:56,485 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 03:01:38] 2025-10-10 18:00:56,518 | INFO     | job 6827234317 has state=finished
[2025-10-11 03:01:38] 2025-10-10 18:00:56,518 | INFO     | preparing for final server update for job 6827234317 in state='finished'
[2025-10-11 03:01:38] 2025-10-10 18:00:56,519 | INFO     | this job has now completed (state=finished)
[2025-10-11 03:01:38] 2025-10-10 18:00:56,519 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 03:01:38] 2025-10-10 18:00:56,519 | INFO     | log transfer has been attempted: DONE
[2025-10-11 03:01:38] 2025-10-10 18:00:56,519 | INFO     | job 6827234317 has finished - writing final server update
[2025-10-11 03:01:38] 2025-10-10 18:00:56,519 | INFO     | total number of processed events: 400 (read)
[2025-10-11 03:01:38] 2025-10-10 18:00:56,519 | INFO     | executing command: lscpu
[2025-10-11 03:01:38] 2025-10-10 18:00:56,528 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 03:01:38] 2025-10-10 18:00:57,102 | INFO     | monitor loop #323: job 0:6827234317 is in state 'finished'
[2025-10-11 03:01:38] 2025-10-10 18:00:57,102 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 03:01:38] 2025-10-10 18:00:57,601 | INFO     | time since job start (4236s) is within the limit (172800.0s)
[2025-10-11 03:01:38] 2025-10-10 18:00:59,604 | INFO     | monitor loop #324: job 0:6827234317 is in state 'finished'
[2025-10-11 03:01:38] 2025-10-10 18:00:59,604 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 03:01:38] 2025-10-10 18:00:59,606 | INFO     | time since job start (4238s) is within the limit (172800.0s)
[2025-10-11 03:01:38] 2025-10-10 18:01:01,611 | INFO     | time since job start (4240s) is within the limit (172800.0s)
[2025-10-11 03:01:38] 2025-10-10 18:01:02,107 | INFO     | monitor loop #325: job 0:6827234317 is in state 'finished'
[2025-10-11 03:01:38] 2025-10-10 18:01:02,107 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 03:01:38] 2025-10-10 18:01:03,615 | INFO     | time since job start (4242s) is within the limit (172800.0s)
[2025-10-11 03:01:38] 2025-10-10 18:01:04,610 | INFO     | monitor loop #326: job 0:6827234317 is in state 'finished'
[2025-10-11 03:01:38] 2025-10-10 18:01:04,610 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 03:01:38] 2025-10-10 18:01:05,620 | INFO     | time since job start (4244s) is within the limit (172800.0s)
[2025-10-11 03:01:38] 2025-10-10 18:01:06,378 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 03:01:38] 2025-10-10 18:01:06,379 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3900.0805
[2025-10-11 03:01:38] 2025-10-10 18:01:06,380 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6827234317/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 03:01:38] 2025-10-10 18:01:06,381 | INFO     | extracted standard info from prmon json
[2025-10-11 03:01:38] 2025-10-10 18:01:06,381 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 03:01:38] 2025-10-10 18:01:06,381 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 03:01:38] 2025-10-10 18:01:06,381 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 03:01:38] 2025-10-10 18:01:06,381 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 03:01:38] 2025-10-10 18:01:06,382 | INFO     | fitting pss+swap vs Time
[2025-10-11 03:01:38] 2025-10-10 18:01:06,382 | INFO     | sum of square deviations: 77515872.0
[2025-10-11 03:01:38] 2025-10-10 18:01:06,382 | INFO     | sum of deviations: -4698956270.0
[2025-10-11 03:01:38] 2025-10-10 18:01:06,382 | INFO     | mean x: 1760117236.0
[2025-10-11 03:01:38] 2025-10-10 18:01:06,382 | INFO     | mean y: 2509351.3333333335
[2025-10-11 03:01:38] 2025-10-10 18:01:06,382 | INFO     | -- intersect: 106699547114.60934
[2025-10-11 03:01:38] 2025-10-10 18:01:06,382 | INFO     | intersect: 106699547114.60934
[2025-10-11 03:01:38] 2025-10-10 18:01:06,382 | INFO     | chi2: 0.03912365953319893
[2025-10-11 03:01:38] 2025-10-10 18:01:06,382 | INFO     | -- intersect: 106699547114.60934
[2025-10-11 03:01:38] 2025-10-10 18:01:06,382 | INFO     | current memory leak: -60.62 B/s (using 63 data points, chi2=0.04)
[2025-10-11 03:01:38] 2025-10-10 18:01:06,383 | INFO     | could have reported an average CPU frequency of 3783 MHz (6 samples)
[2025-10-11 03:01:38] 2025-10-10 18:01:06,383 | INFO     | ..............................
[2025-10-11 03:01:38] 2025-10-10 18:01:06,383 | INFO     | . Timing measurements:
[2025-10-11 03:01:38] 2025-10-10 18:01:06,383 | INFO     | . get job = 0 s
[2025-10-11 03:01:38] 2025-10-10 18:01:06,383 | INFO     | . initial setup = 5 s
[2025-10-11 03:01:38] 2025-10-10 18:01:06,383 | INFO     | . payload setup = 3 s
[2025-10-11 03:01:38] 2025-10-10 18:01:06,383 | INFO     | . stage-in = 0 s
[2025-10-11 03:01:38] 2025-10-10 18:01:06,383 | INFO     | . payload execution = 4215 s
[2025-10-11 03:01:38] 2025-10-10 18:01:06,383 | INFO     | . stage-out = 0 s
[2025-10-11 03:01:38] 2025-10-10 18:01:06,383 | INFO     | . log creation = 0 s
[2025-10-11 03:01:38] 2025-10-10 18:01:06,383 | INFO     | ..............................
[2025-10-11 03:01:38] 2025-10-10 18:01:06,870 | INFO     | 
[2025-10-11 03:01:38] 2025-10-10 18:01:06,870 | INFO     | job summary report
[2025-10-11 03:01:38] 2025-10-10 18:01:06,870 | INFO     | --------------------------------------------------
[2025-10-11 03:01:38] 2025-10-10 18:01:06,870 | INFO     | PanDA job id: 6827234317
[2025-10-11 03:01:38] 2025-10-10 18:01:06,870 | INFO     | task id: 46376905
[2025-10-11 03:01:38] 2025-10-10 18:01:06,870 | INFO     | errors: (none)
[2025-10-11 03:01:38] 2025-10-10 18:01:06,870 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 03:01:38] 2025-10-10 18:01:06,871 | INFO     | pilot state: finished 
[2025-10-11 03:01:38] 2025-10-10 18:01:06,871 | INFO     | transexitcode: 0
[2025-10-11 03:01:38] 2025-10-10 18:01:06,871 | INFO     | exeerrorcode: 0
[2025-10-11 03:01:38] 2025-10-10 18:01:06,871 | INFO     | exeerrordiag: 
[2025-10-11 03:01:38] 2025-10-10 18:01:06,871 | INFO     | exitcode: 0
[2025-10-11 03:01:38] 2025-10-10 18:01:06,871 | INFO     | exitmsg: OK
[2025-10-11 03:01:38] 2025-10-10 18:01:06,871 | INFO     | cpuconsumptiontime: 23019 s
[2025-10-11 03:01:38] 2025-10-10 18:01:06,871 | INFO     | nevents: 400
[2025-10-11 03:01:38] 2025-10-10 18:01:06,871 | INFO     | neventsw: 0
[2025-10-11 03:01:38] 2025-10-10 18:01:06,871 | INFO     | pid: 3021346
[2025-10-11 03:01:38] 2025-10-10 18:01:06,871 | INFO     | pgrp: 3021346
[2025-10-11 03:01:38] 2025-10-10 18:01:06,871 | INFO     | corecount: 6
[2025-10-11 03:01:38] 2025-10-10 18:01:06,871 | INFO     | event service: False
[2025-10-11 03:01:38] 2025-10-10 18:01:06,871 | INFO     | sizes: {0: 2348814, 2: 2349076, 11: 2349104, 4223: 2384210, 4233: 2384348}
[2025-10-11 03:01:38] 2025-10-10 18:01:06,871 | INFO     | --------------------------------------------------
[2025-10-11 03:01:38] 2025-10-10 18:01:06,871 | INFO     | 
[2025-10-11 03:01:38] 2025-10-10 18:01:06,872 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-11 03:01:38] 2025-10-10 18:01:06,879 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 03:01:38] 2025-10-10 18:01:06,879 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 03:01:38] 2025-10-10 18:01:06,879 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 03:01:38] 2025-10-10 18:01:06,879 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 03:01:38] 2025-10-10 18:01:06,879 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 03:01:38] 2025-10-10 18:01:06,880 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 03:01:38] 2025-10-10 18:01:06,880 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 03:01:38] 2025-10-10 18:01:06,880 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 03:01:38] 2025-10-10 18:01:06,880 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 03:01:38] 2025-10-10 18:01:06,880 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 03:01:38] 2025-10-10 18:01:06,880 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 03:01:38] 2025-10-10 18:01:06,880 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 03:01:38] 2025-10-10 18:01:06,880 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 03:01:38] 2025-10-10 18:01:06,880 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 03:01:38] 2025-10-10 18:01:06,880 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 03:01:38] 2025-10-10 18:01:06,880 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 03:01:38] 2025-10-10 18:01:06,880 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 03:01:38] 2025-10-10 18:01:06,880 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 03:01:38] 2025-10-10 18:01:06,880 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 03:01:38] 2025-10-10 18:01:06,880 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 03:01:38] 2025-10-10 18:01:06,881 | INFO     | job 6827234317 has completed (purged errors)
[2025-10-11 03:01:38] 2025-10-10 18:01:06,881 | INFO     | overall cleanup function is called
[2025-10-11 03:01:38] 2025-10-10 18:01:07,887 | INFO     | --- collectZombieJob: --- 10, [3021346]
[2025-10-11 03:01:38] 2025-10-10 18:01:07,887 | INFO     | zombie collector waiting for pid 3021346
[2025-10-11 03:01:38] 2025-10-10 18:01:07,887 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 03:01:38] 2025-10-10 18:01:07,887 | INFO     | collected zombie processes
[2025-10-11 03:01:38] 2025-10-10 18:01:07,887 | INFO     | will attempt to kill all subprocesses of pid=3021346
[2025-10-11 03:01:38] 2025-10-10 18:01:07,949 | INFO     | process IDs to be killed: [3021346] (in reverse order)
[2025-10-11 03:01:38] 2025-10-10 18:01:07,968 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 03:01:38] 2025-10-10 18:01:07,968 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 03:01:38] 2025-10-10 18:01:07,969 | INFO     | did not find any defunct processes belonging to 3021346
[2025-10-11 03:01:38] 2025-10-10 18:01:07,970 | INFO     | did not find any defunct processes belonging to 3021346
[2025-10-11 03:01:38] 2025-10-10 18:01:07,970 | INFO     | ready for new job
[2025-10-11 03:01:38] 2025-10-10 18:01:07,971 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 03:01:38] 2025-10-10 18:01:07,971 | INFO     | ***************************************
[2025-10-11 03:01:38] 2025-10-10 18:01:07,971 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-11 03:01:38] 2025-10-10 18:01:07,971 | INFO     | ***************************************
[2025-10-11 03:01:38] 2025-10-10 18:01:07,971 | INFO     | 
[2025-10-11 03:01:38] 2025-10-10 18:01:07,972 | INFO     | architecture information:
[2025-10-11 03:01:38] 2025-10-10 18:01:07,972 | INFO     | executing command: cat /etc/os-release
[2025-10-11 03:01:38] 2025-10-10 18:01:07,977 | INFO     | cat /etc/os-release:
[2025-10-11 03:01:38] NAME="CentOS Linux"
[2025-10-11 03:01:38] VERSION="7 (Core)"
[2025-10-11 03:01:38] ID="centos"
[2025-10-11 03:01:38] ID_LIKE="rhel fedora"
[2025-10-11 03:01:38] VERSION_ID="7"
[2025-10-11 03:01:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 03:01:38] ANSI_COLOR="0;31"
[2025-10-11 03:01:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 03:01:38] HOME_URL="https://www.centos.org/"
[2025-10-11 03:01:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 03:01:38] 
[2025-10-11 03:01:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 03:01:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 03:01:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 03:01:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 03:01:38] 
[2025-10-11 03:01:38] 2025-10-10 18:01:07,977 | INFO     | ***************************************
[2025-10-11 03:01:38] 2025-10-10 18:01:08,479 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-11 03:01:38] 2025-10-10 18:01:08,485 | INFO     | sufficient remaining disk space (108895666176 B)
[2025-10-11 03:01:38] 2025-10-10 18:01:08,485 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 03:01:38] 2025-10-10 18:01:08,485 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 03:01:38] 2025-10-10 18:01:08,485 | INFO     | update_server=False
[2025-10-11 03:01:38] 2025-10-10 18:01:08,485 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 03:01:38] 2025-10-10 18:01:08,485 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 03:01:38] 2025-10-10 18:01:08,486 | INFO     | aborting loop
[2025-10-11 03:01:38] 2025-10-10 18:01:08,546 | INFO     | all payload control threads have been joined
[2025-10-11 03:01:38] 2025-10-10 18:01:09,194 | INFO     | all data control threads have been joined
[2025-10-11 03:01:38] 2025-10-10 18:01:09,363 | INFO     | all job control threads have been joined
[2025-10-11 03:01:38] 2025-10-10 18:01:09,490 | INFO     | [job] retrieve thread has finished
[2025-10-11 03:01:38] 2025-10-10 18:01:09,491 | INFO     | [job] job monitor thread has finished
[2025-10-11 03:01:38] 2025-10-10 18:01:09,498 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 03:01:38] 2025-10-10 18:01:09,505 | INFO     | [payload] failed_post thread has finished
[2025-10-11 03:01:38] 2025-10-10 18:01:09,552 | INFO     | [payload] control thread has finished
[2025-10-11 03:01:38] 2025-10-10 18:01:09,925 | INFO     | [data] copytool_in thread has finished
[2025-10-11 03:01:38] 2025-10-10 18:01:09,974 | INFO     | [payload] validate_post thread has finished
[2025-10-11 03:01:38] 2025-10-10 18:01:10,199 | INFO     | [data] control thread has finished
[2025-10-11 03:01:38] 2025-10-10 18:01:10,369 | INFO     | [job] control thread has finished
[2025-10-11 03:01:38] 2025-10-10 18:01:10,576 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 03:01:38] 2025-10-10 18:01:10,939 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 03:01:38] 2025-10-10 18:01:10,946 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 03:01:38] 2025-10-10 18:01:10,983 | INFO     | [job] validate thread has finished
[2025-10-11 03:01:38] 2025-10-10 18:01:11,427 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 03:01:38] 2025-10-10 18:01:11,503 | INFO     | [data] copytool_out thread has finished
[2025-10-11 03:01:38] 2025-10-10 18:01:11,529 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 03:01:38] 2025-10-10 18:01:12,432 | INFO     | [job] queue monitor thread has finished
[2025-10-11 03:01:38] 2025-10-10 18:01:15,535 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 03:01:38] 2025-10-10 18:01:18,685 | INFO     | job.realtimelogging is not enabled
[2025-10-11 03:01:38] 2025-10-10 18:01:19,690 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 03:01:38] 2025-10-10 18:01:27,418 | INFO     | [monitor] cgroup control has ended
[2025-10-11 03:01:38] 2025-10-10 18:01:28,933 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140182520690496)>', '<ExcThread(monitor, started 140181885675264)>']
[2025-10-11 03:01:38] 2025-10-10 18:01:33,958 | INFO     | all workflow threads have been joined
[2025-10-11 03:01:38] 2025-10-10 18:01:33,958 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 03:01:38] 2025-10-10 18:01:33,958 | INFO     | traces error code: 0
[2025-10-11 03:01:38] 2025-10-10 18:01:33,958 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 03:01:38] 2025-10-10 18:01:38,755 | INFO     | PID=3014606 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 03:01:38] 2025-10-10 18:01:38,760 | INFO     | .. there are 2 such processes running
[2025-10-11 03:01:38] 2025-10-10 18:01:38,761 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 03:01:38] 2025-10-10 18:01:38,761 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 03:01:38] 2025-10-10 18:01:38,761 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 03:01:38] 2025-10-10 18:01:38,761 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 03:01:38] 2025-10-10 18:01:38,761 | INFO     | [monitor] control thread has ended
[2025-10-11 03:01:38] 2025-10-10 18:01:38,806 [wrapper] ==== pilot stdout END ====
[2025-10-11 03:01:38] 2025-10-10 18:01:38,807 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 03:01:38] 2025-10-10 18:01:38,808 [wrapper] pilotpid: 3014606
[2025-10-11 03:01:38] 2025-10-10 18:01:38,809 [wrapper] Pilot exit status: 0
[2025-10-11 03:01:38] 2025-10-10 18:01:38,812 [wrapper] pandaids: 6827234317
[2025-10-11 03:01:38] 2025-10-10 18:01:38,823 [wrapper] cleanup supervisor_pilot 3053004 3014607
[2025-10-11 03:01:38] 2025-10-10 18:01:38,825 [wrapper] Test setup, not cleaning
[2025-10-11 03:01:38] 2025-10-10 18:01:38,826 [wrapper] apfmon messages muted
[2025-10-11 03:01:38] 2025-10-10 18:01:38,827 [wrapper] ==== wrapper stdout END ====
[2025-10-11 03:01:38] 2025-10-10 18:01:38,828 [wrapper] ==== wrapper stderr END ====
[2025-10-11 03:01:38]  *** Error codes and diagnostics ***
[2025-10-11 03:01:38]     "exeErrorCode": 0,
[2025-10-11 03:01:38]     "exeErrorDiag": "",
[2025-10-11 03:01:38]     "pilotErrorCode": 0,
[2025-10-11 03:01:38]     "pilotErrorDiag": "",
[2025-10-11 03:01:38]  *** Listing of results directory ***
[2025-10-11 03:01:38] total 387212
[2025-10-11 03:01:38] -rw-r--r--. 1 boinc boinc    552446 Oct  3 03:00 pilot3.tar.gz
[2025-10-11 03:01:38] -rw-r--r--. 1 boinc boinc      5112 Oct  3 03:23 queuedata.json
[2025-10-11 03:01:38] -rwx------. 1 boinc boinc     36292 Oct  3 03:24 runpilot2-wrapper.sh
[2025-10-11 03:01:38] -rw-r--r--. 1 boinc boinc       100 Oct 11 01:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 03:01:38] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 01:50 run_atlas
[2025-10-11 03:01:38] -rw-r--r--. 1 boinc boinc       105 Oct 11 01:50 job.xml
[2025-10-11 03:01:38] -rw-r--r--. 2 boinc boinc     15120 Oct 11 01:50 start_atlas.sh
[2025-10-11 03:01:38] drwxrwx--x. 2 boinc boinc        68 Oct 11 01:50 shared
[2025-10-11 03:01:38] -rw-r--r--. 2 boinc boinc    565599 Oct 11 01:50 input.tar.gz
[2025-10-11 03:01:38] -rw-r--r--. 1 boinc boinc      9345 Oct 11 01:50 init_data.xml
[2025-10-11 03:01:38] -rw-r--r--. 2 boinc boinc 216069532 Oct 11 01:50 EVNT.46376901._000872.pool.root.1
[2025-10-11 03:01:38] -rw-r--r--. 1 boinc boinc         0 Oct 11 01:50 boinc_lockfile
[2025-10-11 03:01:38] -rw-r--r--. 1 boinc boinc      2518 Oct 11 01:50 pandaJob.out
[2025-10-11 03:01:38] -rw-------. 1 boinc boinc    975525 Oct 11 01:50 agis_schedconf.cvmfs.json
[2025-10-11 03:01:38] -rw-------. 1 boinc boinc   1560580 Oct 11 01:50 agis_ddmendpoints.agis.ALL.json
[2025-10-11 03:01:38] drwx------. 4 boinc boinc      4096 Oct 11 01:50 pilot3
[2025-10-11 03:01:38] -rw-------. 1 boinc boinc 174730873 Oct 11 03:00 HITS.46376905._027629.pool.root.1
[2025-10-11 03:01:38] -rw-r--r--. 1 boinc boinc       529 Oct 11 03:00 boinc_task_state.xml
[2025-10-11 03:01:38] -rw-------. 1 boinc boinc        95 Oct 11 03:00 pilot_heartbeat.json
[2025-10-11 03:01:38] -rw-------. 1 boinc boinc      1022 Oct 11 03:00 memory_monitor_summary.json
[2025-10-11 03:01:38] -rw-------. 1 boinc boinc    276691 Oct 11 03:00 log.46376905._027629.job.log.tgz.1
[2025-10-11 03:01:38] -rw-------. 1 boinc boinc      7774 Oct 11 03:01 heartbeat.json
[2025-10-11 03:01:38] -rw-r--r--. 1 boinc boinc      8192 Oct 11 03:01 boinc_mmap_file
[2025-10-11 03:01:38] -rw-r--r--. 1 boinc boinc        27 Oct 11 03:01 wrapper_checkpoint.txt
[2025-10-11 03:01:38] -rw-------. 1 boinc boinc       822 Oct 11 03:01 pilotlog.txt
[2025-10-11 03:01:38] -rw-------. 1 boinc boinc    636989 Oct 11 03:01 log.46376905._027629.job.log.1
[2025-10-11 03:01:38] -rw-------. 1 boinc boinc       357 Oct 11 03:01 output.list
[2025-10-11 03:01:38] -rw-r--r--. 1 boinc boinc       620 Oct 11 03:01 runtime_log
[2025-10-11 03:01:38] -rw-------. 1 boinc boinc    931840 Oct 11 03:01 result.tar.gz
[2025-10-11 03:01:38] -rw-r--r--. 1 boinc boinc      8651 Oct 11 03:01 runtime_log.err
[2025-10-11 03:01:38] -rw-------. 1 boinc boinc       638 Oct 11 03:01 rbSKDmO9cO8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRGFNDmyIofVm.diag
[2025-10-11 03:01:38] -rw-r--r--. 1 boinc boinc     22181 Oct 11 03:01 stderr.txt
[2025-10-11 03:01:38] HITS file was successfully produced:
[2025-10-11 03:01:38] -rw-------. 1 boinc boinc 174730873 Oct 11 03:00 shared/HITS.pool.root.1
[2025-10-11 03:01:38]  *** Contents of shared directory: ***
[2025-10-11 03:01:38] total 383128
[2025-10-11 03:01:38] -rw-r--r--. 2 boinc boinc     15120 Oct 11 01:50 start_atlas.sh
[2025-10-11 03:01:38] -rw-r--r--. 2 boinc boinc    565599 Oct 11 01:50 input.tar.gz
[2025-10-11 03:01:38] -rw-r--r--. 2 boinc boinc 216069532 Oct 11 01:50 ATLAS.root_0
[2025-10-11 03:01:38] -rw-------. 1 boinc boinc 174730873 Oct 11 03:00 HITS.pool.root.1
[2025-10-11 03:01:38] -rw-------. 1 boinc boinc    931840 Oct 11 03:01 result.tar.gz
03:01:40 (3010804): run_atlas exited; CPU time 23064.530146
03:01:40 (3010804): called boinc_finish(0)

</stderr_txt>
]]>

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