Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:38:09 (1780163): wrapper (7.7.26015): starting
20:38:09 (1780163): wrapper: running run_atlas (--nthreads 12)
[2025-10-09 20:38:09] Arguments: --nthreads 12
[2025-10-09 20:38:09] Threads: 12
[2025-10-09 20:38:09] Checking for CVMFS
[2025-10-09 20:38:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 20:38:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 20:38:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 20:38:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 20:38:10] 2.11.5.0 2605 28047 218968 151533 0 232 36924969 45568000 22141 130560 0 263205217 99.862 111333896 28052 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-09 20:38:10] CVMFS is ok
[2025-10-09 20:38:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 20:38:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 20:38:10] Further information can be found at the LHC@home message board.
[2025-10-09 20:38:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 20:38:10] Checking for apptainer binary...
[2025-10-09 20:38:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 20:38:10] Running /usr/bin/apptainer --version
[2025-10-09 20:38:10] apptainer version 1.4.1-1.el9
[2025-10-09 20:38:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 20:38:11] wns0089.triumf.lcg
[2025-10-09 20:38:11] apptainer works
[2025-10-09 20:38:11] Set ATHENA_PROC_NUMBER=12
[2025-10-09 20:38:11] Set ATHENA_CORE_NUMBER=12
[2025-10-09 20:38:12] Starting ATLAS job with PandaID=6837377546
[2025-10-09 20:38:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 20:43:57]  *** The last 200 lines of the pilot log: ***
[2025-10-09 20:43:57] 2025-10-10 03:42:59,715 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 20:43:57] 2025-10-10 03:42:59,715 | WARNING  | wrong length of table data, x=[1760067607.0], y=[796.0] (must be same and length>=4)
[2025-10-09 20:43:57] 2025-10-10 03:42:59,716 | INFO     | could have reported an average CPU frequency of 2727 MHz (4 samples)
[2025-10-09 20:43:57] 2025-10-10 03:42:59,716 | INFO     | ..............................
[2025-10-09 20:43:57] 2025-10-10 03:42:59,716 | INFO     | . Timing measurements:
[2025-10-09 20:43:57] 2025-10-10 03:42:59,716 | INFO     | . get job = 0 s
[2025-10-09 20:43:57] 2025-10-10 03:42:59,716 | INFO     | . initial setup = 4 s
[2025-10-09 20:43:57] 2025-10-10 03:42:59,716 | INFO     | . payload setup = 19 s
[2025-10-09 20:43:57] 2025-10-10 03:42:59,716 | INFO     | . stage-in = 0 s
[2025-10-09 20:43:57] 2025-10-10 03:42:59,716 | INFO     | . payload execution = 53 s
[2025-10-09 20:43:57] 2025-10-10 03:42:59,720 | INFO     | . stage-out = 0 s
[2025-10-09 20:43:57] 2025-10-10 03:42:59,720 | INFO     | . log creation = 0 s
[2025-10-09 20:43:57] 2025-10-10 03:42:59,720 | INFO     | ..............................
[2025-10-09 20:43:57] 2025-10-10 03:42:59,720 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 20:43:57] 2025-10-10 03:42:59,720 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837377546/pilotlog.txt
[2025-10-09 20:43:57] 2025-10-10 03:42:59,745 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-09 20:43:57] - Log from pilotlog.txt -
[2025-10-09 20:43:57] 2025-10-10 03:42:59,714 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837377546/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 20:43:57] 2025-10-10 03:42:59,715 | INFO     | extracted standard info from prmon json
[2025-10-09 20:43:57] 2025-10-10 03:42:59,715 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 20:43:57] 2025-10-10 03:42:59,715 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 20:43:57] 2025-10-10 03:42:59,715 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 20:43:57] 2025-10-10 03:42:59,715 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 20:43:57] 2025-10-10 03:42:59,715 | WARNING  | wrong length of table data, x=[1760067607.0], y=[796.0] (must be same and length>=4)
[2025-10-09 20:43:57] 2025-10-10 03:42:59,716 | INFO     | could have reported an average CPU frequency of 2727 MHz (4 samples)
[2025-10-09 20:43:57] 2025-10-10 03:42:59,716 | INFO     | ..............................
[2025-10-09 20:43:57] 2025-10-10 03:42:59,716 | INFO     | . Timing measurements:
[2025-10-09 20:43:57] 2025-10-10 03:42:59,716 | INFO     | . get job = 0 s
[2025-10-09 20:43:57] 2025-10-10 03:42:59,716 | INFO     | . initial setup = 4 s
[2025-10-09 20:43:57] 2025-10-10 03:42:59,716 | INFO     | . payload setup = 19 s
[2025-10-09 20:43:57] 2025-10-10 03:42:59,716 | INFO     | . stage-in = 0 s
[2025-10-09 20:43:57] 2025-10-10 03:42:59,716 | INFO     | . payload execution = 53 s
[2025-10-09 20:43:57] 2025-10-10 03:42:59,720 | INFO     | . stage-out = 0 s
[2025-10-09 20:43:57] 2025-10-10 03:42:59,720 | INFO     | . log creation = 0 s
[2025-10-09 20:43:57] 2025-10-10 03:42:59,720 | INFO     | ..............................
[2025-10-09 20:43:57] 2025-10-10 03:42:59,720 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 20:43:57] 2025-10-10 03:42:59,720 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837377546/pilotlog.txt
[2025-10-09 20:43:57] 2025-10-10 03:42:59,746 | WARNING  | 
[2025-10-09 20:43:57] [begin log extracts]
[2025-10-09 20:43:57] - Log from pilotlog.txt -
[2025-10-09 20:43:57] 2025-10-10 03:42:59,714 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837377546/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 20:43:57] 2025-10-10 03:42:59,715 | INFO     | extracted standard info from prmon json
[2025-10-09 20:43:57] 2025-10-10 03:42:59,715 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 20:43:57] 2025-10-10 03:42:59,715 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 20:43:57] 2025-10-10 03:42:59,715 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 20:43:57] 2025-10-10 03:42:59,715 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 20:43:57] 2025-10-10 03:42:59,715 | WARNING  | wrong length of table data, x=[1760067607.0], y=[796.0] (must be same and length>=4)
[2025-10-09 20:43:57] 2025-10-10 03:42:59,716 | INFO     | could have reported an average CPU frequency of 2727 MHz (4 samples)
[2025-10-09 20:43:57] 2025-10-10 03:42:59,716 | INFO     | ..............................
[2025-10-09 20:43:57] 2025-10-10 03:42:59,716 | INFO     | . Timing measurements:
[2025-10-09 20:43:57] 2025-10-10 03:42:59,716 | INFO     | . get job = 0 s
[2025-10-09 20:43:57] 2025-10-10 03:42:59,716 | INFO     | . initial setup = 4 s
[2025-10-09 20:43:57] 2025-10-10 03:42:59,716 | INFO     | . payload setup = 19 s
[2025-10-09 20:43:57] 2025-10-10 03:42:59,716 | INFO     | . stage-in = 0 s
[2025-10-09 20:43:57] 2025-10-10 03:42:59,716 | INFO     | . payload execution = 53 s
[2025-10-09 20:43:57] 2025-10-10 03:42:59,720 | INFO     | . stage-out = 0 s
[2025-10-09 20:43:57] 2025-10-10 03:42:59,720 | INFO     | . log creation = 0 s
[2025-10-09 20:43:57] 2025-10-10 03:42:59,720 | INFO     | ..............................
[2025-10-09 20:43:57] 2025-10-10 03:42:59,720 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 20:43:57] 2025-10-10 03:42:59,720 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837377546/pilotlog.txt
[2025-10-09 20:43:57] [end log extracts]
[2025-10-09 20:43:57] 2025-10-10 03:42:59,746 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-09 20:43:57] 2025-10-10 03:42:59,746 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-09 20:43:57] 2025-10-10 03:42:59,857 | INFO     | 
[2025-10-09 20:43:57] 2025-10-10 03:42:59,857 | INFO     | job summary report
[2025-10-09 20:43:57] 2025-10-10 03:42:59,857 | INFO     | --------------------------------------------------
[2025-10-09 20:43:57] 2025-10-10 03:42:59,857 | INFO     | PanDA job id: 6837377546
[2025-10-09 20:43:57] 2025-10-10 03:42:59,858 | INFO     | task id: 46676269
[2025-10-09 20:43:57] 2025-10-10 03:42:59,858 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-09 20:40:35,245 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-09 20:43:57] 2025-10-10 03:42:59,858 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 20:43:57] 2025-10-10 03:42:59,858 | INFO     | pilot state: failed 
[2025-10-09 20:43:57] 2025-10-10 03:42:59,858 | INFO     | transexitcode: 65
[2025-10-09 20:43:57] 2025-10-10 03:42:59,858 | INFO     | exeerrorcode: 65
[2025-10-09 20:43:57] 2025-10-10 03:42:59,858 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 20:43:57] 2025-10-10 03:42:59,858 | INFO     | exitcode: 65
[2025-10-09 20:43:57] 2025-10-10 03:42:59,858 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 20:43:57] 2025-10-10 03:42:59,858 | INFO     | cpuconsumptiontime: 18 s
[2025-10-09 20:43:57] 2025-10-10 03:42:59,858 | INFO     | nevents: 0
[2025-10-09 20:43:57] 2025-10-10 03:42:59,858 | INFO     | neventsw: 0
[2025-10-09 20:43:57] 2025-10-10 03:42:59,858 | INFO     | pid: 1791836
[2025-10-09 20:43:57] 2025-10-10 03:42:59,858 | INFO     | pgrp: 1791836
[2025-10-09 20:43:57] 2025-10-10 03:42:59,858 | INFO     | corecount: 12
[2025-10-09 20:43:57] 2025-10-10 03:42:59,858 | INFO     | event service: False
[2025-10-09 20:43:57] 2025-10-10 03:42:59,858 | INFO     | sizes: {0: 2348854, 11: 2348854, 20: 2349144, 22: 2349172, 76: 2372374, 77: 2372378, 78: 2376854, 79: 2376910, 213: 2377104}
[2025-10-09 20:43:57] 2025-10-10 03:42:59,858 | INFO     | --------------------------------------------------
[2025-10-09 20:43:57] 2025-10-10 03:42:59,858 | INFO     | 
[2025-10-09 20:43:57] 2025-10-10 03:42:59,859 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-09 20:43:57] 2025-10-10 03:43:00,133 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 20:43:57] 2025-10-10 03:43:00,134 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 20:43:57] 2025-10-10 03:43:00,134 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 20:43:57] 2025-10-10 03:43:00,134 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 20:43:57] 2025-10-10 03:43:00,134 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 20:43:57] 2025-10-10 03:43:00,134 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 20:43:57] 2025-10-10 03:43:00,134 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 20:43:57] 2025-10-10 03:43:00,134 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 20:43:57] 2025-10-10 03:43:00,134 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 20:43:57] 2025-10-10 03:43:00,134 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 20:43:57] 2025-10-10 03:43:00,134 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 20:43:57] 2025-10-10 03:43:00,134 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 20:43:57] 2025-10-10 03:43:00,134 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 20:43:57] 2025-10-10 03:43:00,134 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 20:43:57] 2025-10-10 03:43:00,134 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 20:43:57] 2025-10-10 03:43:00,135 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 20:43:57] 2025-10-10 03:43:00,135 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 20:43:57] 2025-10-10 03:43:00,135 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 20:43:57] 2025-10-10 03:43:00,135 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 20:43:57] 2025-10-10 03:43:00,135 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 20:43:57] 2025-10-10 03:43:00,135 | INFO     | job 6837377546 has completed (purged errors)
[2025-10-09 20:43:57] 2025-10-10 03:43:00,136 | INFO     | overall cleanup function is called
[2025-10-09 20:43:57] 2025-10-10 03:43:00,719 | INFO     | PID=1783972 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 20:43:57] 2025-10-10 03:43:00,719 | INFO     | .. there are 42 such processes running
[2025-10-09 20:43:57] 2025-10-10 03:43:01,142 | INFO     | --- collectZombieJob: --- 10, [1791836]
[2025-10-09 20:43:57] 2025-10-10 03:43:01,142 | INFO     | zombie collector waiting for pid 1791836
[2025-10-09 20:43:57] 2025-10-10 03:43:01,142 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 20:43:57] 2025-10-10 03:43:01,142 | INFO     | collected zombie processes
[2025-10-09 20:43:57] 2025-10-10 03:43:01,142 | INFO     | will attempt to kill all subprocesses of pid=1791836
[2025-10-09 20:43:57] 2025-10-10 03:43:01,531 | INFO     | process IDs to be killed: [1791836] (in reverse order)
[2025-10-09 20:43:57] 2025-10-10 03:43:01,768 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 20:43:57] 2025-10-10 03:43:01,768 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 20:43:57] 2025-10-10 03:43:01,878 | INFO     | did not find any defunct processes belonging to 1791836
[2025-10-09 20:43:57] 2025-10-10 03:43:01,957 | INFO     | did not find any defunct processes belonging to 1791836
[2025-10-09 20:43:57] 2025-10-10 03:43:01,957 | INFO     | ready for new job
[2025-10-09 20:43:57] 2025-10-10 03:43:01,957 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 20:43:57] 2025-10-10 03:43:01,959 | INFO     | ***************************************
[2025-10-09 20:43:57] 2025-10-10 03:43:01,959 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 20:43:57] 2025-10-10 03:43:01,959 | INFO     | ***************************************
[2025-10-09 20:43:57] 2025-10-10 03:43:01,959 | INFO     | 
[2025-10-09 20:43:57] 2025-10-10 03:43:01,992 | INFO     | architecture information:
[2025-10-09 20:43:57] 2025-10-10 03:43:01,996 | INFO     | executing command: cat /etc/os-release
[2025-10-09 20:43:57] 2025-10-10 03:43:02,052 | INFO     | cat /etc/os-release:
[2025-10-09 20:43:57] NAME="CentOS Linux"
[2025-10-09 20:43:57] VERSION="7 (Core)"
[2025-10-09 20:43:57] ID="centos"
[2025-10-09 20:43:57] ID_LIKE="rhel fedora"
[2025-10-09 20:43:57] VERSION_ID="7"
[2025-10-09 20:43:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 20:43:57] ANSI_COLOR="0;31"
[2025-10-09 20:43:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 20:43:57] HOME_URL="https://www.centos.org/"
[2025-10-09 20:43:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 20:43:57] 
[2025-10-09 20:43:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 20:43:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 20:43:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 20:43:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 20:43:57] 
[2025-10-09 20:43:57] 2025-10-10 03:43:02,053 | INFO     | ***************************************
[2025-10-09 20:43:57] 2025-10-10 03:43:02,556 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-09 20:43:57] 2025-10-10 03:43:02,619 | INFO     | sufficient remaining disk space (1808065888256 B)
[2025-10-09 20:43:57] 2025-10-10 03:43:02,626 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 20:43:57] 2025-10-10 03:43:02,626 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 20:43:57] 2025-10-10 03:43:02,626 | INFO     | update_server=False
[2025-10-09 20:43:57] 2025-10-10 03:43:02,627 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 20:43:57] 2025-10-10 03:43:02,627 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 20:43:57] 2025-10-10 03:43:02,627 | INFO     | aborting loop
[2025-10-09 20:43:57] 2025-10-10 03:43:02,644 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 20:43:57] 2025-10-10 03:43:03,155 | INFO     | all payload control threads have been joined
[2025-10-09 20:43:57] 2025-10-10 03:43:03,633 | INFO     | [job] job monitor thread has finished
[2025-10-09 20:43:57] 2025-10-10 03:43:03,637 | INFO     | [job] retrieve thread has finished
[2025-10-09 20:43:57] 2025-10-10 03:43:03,660 | INFO     | all data control threads have been joined
[2025-10-09 20:43:57] 2025-10-10 03:43:03,748 | INFO     | [job] validate thread has finished
[2025-10-09 20:43:57] 2025-10-10 03:43:03,800 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 20:43:57] 2025-10-10 03:43:03,943 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 20:43:57] 2025-10-10 03:43:03,947 | INFO     | [payload] validate_post thread has finished
[2025-10-09 20:43:57] 2025-10-10 03:43:03,961 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 20:43:57] 2025-10-10 03:43:04,161 | INFO     | [payload] control thread has finished
[2025-10-09 20:43:57] 2025-10-10 03:43:04,368 | INFO     | all job control threads have been joined
[2025-10-09 20:43:57] 2025-10-10 03:43:04,670 | INFO     | [data] copytool_in thread has finished
[2025-10-09 20:43:57] 2025-10-10 03:43:04,671 | INFO     | [data] control thread has finished
[2025-10-09 20:43:57] 2025-10-10 03:43:04,726 | INFO     | [payload] failed_post thread has finished
[2025-10-09 20:43:57] 2025-10-10 03:43:04,744 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 20:43:57] 2025-10-10 03:43:04,872 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 20:43:57] 2025-10-10 03:43:04,983 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 20:43:57] 2025-10-10 03:43:05,374 | INFO     | [job] control thread has finished
[2025-10-09 20:43:57] 2025-10-10 03:43:05,806 | INFO     | [data] copytool_out thread has finished
[2025-10-09 20:43:57] 2025-10-10 03:43:05,881 | INFO     | [job] queue monitor thread has finished
[2025-10-09 20:43:57] 2025-10-10 03:43:06,653 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 20:43:57] 2025-10-10 03:43:33,197 | INFO     | PID=1783972 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 20:43:57] 2025-10-10 03:43:33,197 | INFO     | .. there are 42 such processes running
[2025-10-09 20:43:57] 2025-10-10 03:43:33,210 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 20:43:57] 2025-10-10 03:43:33,210 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 20:43:57] 2025-10-10 03:43:33,210 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 20:43:57] 2025-10-10 03:43:50,471 | INFO     | [monitor] cgroup control has ended
[2025-10-09 20:43:57] 2025-10-10 03:43:50,884 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140117280966464)>', '<ExcThread(monitor, started 140116513249024)>']
[2025-10-09 20:43:57] 2025-10-10 03:43:51,319 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 20:43:57] 2025-10-10 03:43:51,319 | INFO     | [monitor] control thread has ended
[2025-10-09 20:43:57] 2025-10-10 03:43:55,910 | INFO     | all workflow threads have been joined
[2025-10-09 20:43:57] 2025-10-10 03:43:55,910 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 20:43:57] 2025-10-10 03:43:55,911 | INFO     | traces error code: 0
[2025-10-09 20:43:57] 2025-10-10 03:43:55,911 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 20:43:57] 2025-10-10 03:43:56,475 [wrapper] ==== pilot stdout END ====
[2025-10-09 20:43:57] 2025-10-10 03:43:56,477 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 20:43:57] 2025-10-10 03:43:56,479 [wrapper] pilotpid: 1783972
[2025-10-09 20:43:57] 2025-10-10 03:43:56,481 [wrapper] Pilot exit status: 0
[2025-10-09 20:43:57] 2025-10-10 03:43:56,554 [wrapper] pandaids: 6837377546
[2025-10-09 20:43:57] 2025-10-10 03:43:56,912 [wrapper] cleanup supervisor_pilot 1783978 1783973
[2025-10-09 20:43:57] 2025-10-10 03:43:56,915 [wrapper] Test setup, not cleaning
[2025-10-09 20:43:57] 2025-10-10 03:43:56,916 [wrapper] apfmon messages muted
[2025-10-09 20:43:57] 2025-10-10 03:43:56,918 [wrapper] ==== wrapper stdout END ====
[2025-10-09 20:43:57] 2025-10-10 03:43:56,920 [wrapper] ==== wrapper stderr END ====
[2025-10-09 20:43:57]  *** Error codes and diagnostics ***
[2025-10-09 20:43:57]     "exeErrorCode": 65,
[2025-10-09 20:43:57]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 20:43:57]     "pilotErrorCode": 1305,
[2025-10-09 20:43:57]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 20:43:57]  *** Listing of results directory ***
[2025-10-09 20:43:57] total 218484
[2025-10-09 20:43:57] -rw-r--r--. 1 boinc boinc    557409 Oct  9 17:42 pilot3.tar.gz
[2025-10-09 20:43:57] -rw-r--r--. 1 boinc boinc      5112 Oct  9 17:55 queuedata.json
[2025-10-09 20:43:57] -rwx------. 1 boinc boinc     36292 Oct  9 17:56 runpilot2-wrapper.sh
[2025-10-09 20:43:57] -rw-r--r--. 1 boinc boinc       100 Oct  9 20:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 20:43:57] -rwxr-xr-x. 1 boinc boinc      7986 Oct  9 20:38 run_atlas
[2025-10-09 20:43:57] -rw-r--r--. 1 boinc boinc       105 Oct  9 20:38 job.xml
[2025-10-09 20:43:57] -rw-r--r--. 1 boinc boinc      6594 Oct  9 20:38 init_data.xml
[2025-10-09 20:43:57] -rw-r--r--. 2 boinc boinc 219590803 Oct  9 20:38 EVNT.46676267._001074.pool.root.1
[2025-10-09 20:43:57] -rw-r--r--. 2 boinc boinc     15120 Oct  9 20:38 start_atlas.sh
[2025-10-09 20:43:57] drwxrwx--x. 2 boinc boinc      4096 Oct  9 20:38 shared
[2025-10-09 20:43:57] -rw-r--r--. 2 boinc boinc    569680 Oct  9 20:38 input.tar.gz
[2025-10-09 20:43:57] -rw-r--r--. 1 boinc boinc         0 Oct  9 20:38 boinc_lockfile
[2025-10-09 20:43:57] -rw-r--r--. 1 boinc boinc      2550 Oct  9 20:38 pandaJob.out
[2025-10-09 20:43:57] -rw-------. 1 boinc boinc    975454 Oct  9 20:38 agis_schedconf.cvmfs.json
[2025-10-09 20:43:57] -rw-------. 1 boinc boinc   1560580 Oct  9 20:38 agis_ddmendpoints.agis.ALL.json
[2025-10-09 20:43:57] drwx------. 5 boinc boinc      4096 Oct  9 20:38 pilot3
[2025-10-09 20:43:57] -rw-r--r--. 1 boinc boinc       523 Oct  9 20:40 boinc_task_state.xml
[2025-10-09 20:43:57] -rw-------. 1 boinc boinc       951 Oct  9 20:40 memory_monitor_summary.json
[2025-10-09 20:43:57] -rw-------. 1 boinc boinc     22256 Oct  9 20:40 log.46676269._029253.job.log.tgz.1
[2025-10-09 20:43:57] -rw-------. 1 boinc boinc        95 Oct  9 20:42 pilot_heartbeat.json
[2025-10-09 20:43:57] -rw-------. 1 boinc boinc      8379 Oct  9 20:42 heartbeat.json
[2025-10-09 20:43:57] -rw-r--r--. 1 boinc boinc      8192 Oct  9 20:43 boinc_mmap_file
[2025-10-09 20:43:57] -rw-r--r--. 1 boinc boinc        22 Oct  9 20:43 wrapper_checkpoint.txt
[2025-10-09 20:43:57] -rw-------. 1 boinc boinc      4823 Oct  9 20:43 pilotlog.txt
[2025-10-09 20:43:57] -rw-------. 1 boinc boinc     93016 Oct  9 20:43 log.46676269._029253.job.log.1
[2025-10-09 20:43:57] -rw-------. 1 boinc boinc       188 Oct  9 20:43 output.list
[2025-10-09 20:43:57] -rw-r--r--. 1 boinc boinc       620 Oct  9 20:43 runtime_log
[2025-10-09 20:43:57] -rw-------. 1 boinc boinc    133120 Oct  9 20:43 result.tar.gz
[2025-10-09 20:43:57] -rw-r--r--. 1 boinc boinc      8528 Oct  9 20:43 runtime_log.err
[2025-10-09 20:43:57] -rw-------. 1 boinc boinc       644 Oct  9 20:43 5qhNDm5bGR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjobNDmfNmSYm.diag
[2025-10-09 20:43:57] -rw-r--r--. 1 boinc boinc     21862 Oct  9 20:43 stderr.txt
[2025-10-09 20:43:57] No HITS result produced
[2025-10-09 20:43:57]  *** Contents of shared directory: ***
[2025-10-09 20:43:57] total 215160
[2025-10-09 20:43:57] -rw-r--r--. 2 boinc boinc 219590803 Oct  9 20:38 ATLAS.root_0
[2025-10-09 20:43:57] -rw-r--r--. 2 boinc boinc     15120 Oct  9 20:38 start_atlas.sh
[2025-10-09 20:43:57] -rw-r--r--. 2 boinc boinc    569680 Oct  9 20:38 input.tar.gz
[2025-10-09 20:43:57] -rw-------. 1 boinc boinc    133120 Oct  9 20:43 result.tar.gz
20:43:58 (1780163): run_atlas exited; CPU time 28.744373
20:43:58 (1780163): called boinc_finish(0)

</stderr_txt>
]]>

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