Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:48:33 (1746896): wrapper (7.7.26015): starting
15:48:33 (1746896): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 15:48:33] Arguments: --nthreads 4
[2025-10-11 15:48:33] Threads: 4
[2025-10-11 15:48:33] Checking for CVMFS
[2025-10-11 15:48:33] No cvmfs_config command found, will try listing directly
[2025-10-11 15:48:33] CVMFS is ok
[2025-10-11 15:48:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 15:48:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 15:48:33] Further information can be found at the LHC@home message board.
[2025-10-11 15:48:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 15:48:33] Checking for apptainer binary...
[2025-10-11 15:48:33] which: no apptainer in ((null))
[2025-10-11 15:48:33] apptainer is not installed, using version from CVMFS
[2025-10-11 15:48:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 15:48:33] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2025-10-11 15:48:33] apptainer works
[2025-10-11 15:48:33] Set ATHENA_PROC_NUMBER=4
[2025-10-11 15:48:33] Set ATHENA_CORE_NUMBER=4
[2025-10-11 15:48:33] Starting ATLAS job with PandaID=6837363971
[2025-10-11 15:48:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 19:39:37]  *** The last 200 lines of the pilot log: ***
[2025-10-11 19:39:37] 2025-10-11 17:20:11,468 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 19:39:37] 2025-10-11 17:20:11,472 | INFO     | fitting pss+swap vs Time
[2025-10-11 19:39:37] 2025-10-11 17:20:11,473 | INFO     | sum of square deviations: 2790348132.0
[2025-10-11 19:39:37] 2025-10-11 17:20:11,474 | INFO     | sum of deviations: 12652858967.5
[2025-10-11 19:39:37] 2025-10-11 17:20:11,474 | INFO     | mean x: 1760196860.5
[2025-10-11 19:39:37] 2025-10-11 17:20:11,474 | INFO     | mean y: 2312325.514423077
[2025-10-11 19:39:37] 2025-10-11 17:20:11,475 | INFO     | -- intersect: -7979316337.780545
[2025-10-11 19:39:37] 2025-10-11 17:20:11,475 | INFO     | intersect: -7979316337.780545
[2025-10-11 19:39:37] 2025-10-11 17:20:11,475 | INFO     | chi2: 2.0377417726000306
[2025-10-11 19:39:37] 2025-10-11 17:20:11,476 | INFO     | sum of square deviations: 2593916542.0
[2025-10-11 19:39:37] 2025-10-11 17:20:11,477 | INFO     | sum of deviations: 23977744336.000004
[2025-10-11 19:39:37] 2025-10-11 17:20:11,477 | INFO     | mean x: 1760196708.0
[2025-10-11 19:39:37] 2025-10-11 17:20:11,477 | INFO     | mean y: 2320937.3349753693
[2025-10-11 19:39:37] 2025-10-11 17:20:11,477 | INFO     | -- intersect: -16268652304.136744
[2025-10-11 19:39:37] 2025-10-11 17:20:11,478 | INFO     | intersect: -16268652304.136744
[2025-10-11 19:39:37] 2025-10-11 17:20:11,478 | INFO     | chi2: 1.3764194616486156
[2025-10-11 19:39:37] 2025-10-11 17:20:11,478 | INFO     | current chi2=1.3764194616486156 (change=32.45368573406675 %)
[2025-10-11 19:39:37] 2025-10-11 17:20:11,478 | INFO     | sum of square deviations: 2406926989.5
[2025-10-11 19:39:37] 2025-10-11 17:20:11,480 | INFO     | sum of deviations: 23209358598.499996
[2025-10-11 19:39:37] 2025-10-11 17:20:11,480 | INFO     | mean x: 1760196555.5
[2025-10-11 19:39:37] 2025-10-11 17:20:11,480 | INFO     | mean y: 2320310.5505050505
[2025-10-11 19:39:37] 2025-10-11 17:20:11,480 | INFO     | -- intersect: -16970788237.677853
[2025-10-11 19:39:37] 2025-10-11 17:20:11,480 | INFO     | intersect: -16970788237.677853
[2025-10-11 19:39:37] 2025-10-11 17:20:11,481 | INFO     | chi2: 1.37727885190548
[2025-10-11 19:39:37] 2025-10-11 17:20:11,481 | INFO     | current chi2=1.37727885190548 (change=-0.06243665400044421 %)
[2025-10-11 19:39:37] 2025-10-11 17:20:11,481 | INFO     | right removable region: 197
[2025-10-11 19:39:37] 2025-10-11 17:20:11,481 | INFO     | sum of square deviations: 2593916542.0
[2025-10-11 19:39:37] 2025-10-11 17:20:11,483 | INFO     | sum of deviations: -14660710781.000002
[2025-10-11 19:39:37] 2025-10-11 17:20:11,483 | INFO     | mean x: 1760197013.0
[2025-10-11 19:39:37] 2025-10-11 17:20:11,483 | INFO     | mean y: 2333275.2709359606
[2025-10-11 19:39:37] 2025-10-11 17:20:11,483 | INFO     | -- intersect: 9950895192.0996
[2025-10-11 19:39:37] 2025-10-11 17:20:11,483 | INFO     | intersect: 9950895192.0996
[2025-10-11 19:39:37] 2025-10-11 17:20:11,484 | INFO     | chi2: 0.6941690304892095
[2025-10-11 19:39:37] 2025-10-11 17:20:11,484 | INFO     | current chi2=0.6941690304892095 (change=65.93439660396747 %)
[2025-10-11 19:39:37] 2025-10-11 17:20:11,484 | INFO     | sum of square deviations: 2406926989.5
[2025-10-11 19:39:37] 2025-10-11 17:20:11,485 | INFO     | sum of deviations: -12906511638.000002
[2025-10-11 19:39:37] 2025-10-11 17:20:11,486 | INFO     | mean x: 1760197165.5
[2025-10-11 19:39:37] 2025-10-11 17:20:11,486 | INFO     | mean y: 2331828.595959596
[2025-10-11 19:39:37] 2025-10-11 17:20:11,486 | INFO     | -- intersect: 9440925230.392355
[2025-10-11 19:39:37] 2025-10-11 17:20:11,486 | INFO     | intersect: 9440925230.392355
[2025-10-11 19:39:37] 2025-10-11 17:20:11,486 | INFO     | chi2: 0.6902490381121242
[2025-10-11 19:39:37] 2025-10-11 17:20:11,486 | INFO     | current chi2=0.6902490381121242 (change=0.564702861250193 %)
[2025-10-11 19:39:37] 2025-10-11 17:20:11,487 | INFO     | left removable region: 20
[2025-10-11 19:39:37] 2025-10-11 17:20:11,487 | INFO     | sum of square deviations: 1719429448.0
[2025-10-11 19:39:37] 2025-10-11 17:20:11,488 | INFO     | sum of deviations: 1597308484.9999998
[2025-10-11 19:39:37] 2025-10-11 17:20:11,488 | INFO     | mean x: 1760197135.0
[2025-10-11 19:39:37] 2025-10-11 17:20:11,488 | INFO     | mean y: 2338080.197740113
[2025-10-11 19:39:37] 2025-10-11 17:20:11,488 | INFO     | -- intersect: -1632842602.7192307
[2025-10-11 19:39:37] 2025-10-11 17:20:11,489 | INFO     | intersect: -1632842602.7192307
[2025-10-11 19:39:37] 2025-10-11 17:20:11,489 | INFO     | chi2: 0.00031976735155054577
[2025-10-11 19:39:37] 2025-10-11 17:20:11,489 | INFO     | -- intersect: -1632842602.7192307
[2025-10-11 19:39:37] 2025-10-11 17:20:11,489 | INFO     | current memory leak: 0.93 B/s (using 177 data points, chi2=0.00)
[2025-10-11 19:39:37] 2025-10-11 17:20:11,490 | INFO     | could have reported an average CPU frequency of 2599 MHz (11 samples)
[2025-10-11 19:39:37] 2025-10-11 17:20:11,490 | INFO     | ..............................
[2025-10-11 19:39:37] 2025-10-11 17:20:11,490 | INFO     | . Timing measurements:
[2025-10-11 19:39:37] 2025-10-11 17:20:11,490 | INFO     | . get job = 0 s
[2025-10-11 19:39:37] 2025-10-11 17:20:11,490 | INFO     | . initial setup = 1 s
[2025-10-11 19:39:37] 2025-10-11 17:20:11,490 | INFO     | . payload setup = 5 s
[2025-10-11 19:39:37] 2025-10-11 17:20:11,491 | INFO     | . stage-in = 0 s
[2025-10-11 19:39:37] 2025-10-11 17:20:11,491 | INFO     | . payload execution = 12657 s
[2025-10-11 19:39:37] 2025-10-11 17:20:11,491 | INFO     | . stage-out = 1 s
[2025-10-11 19:39:37] 2025-10-11 17:20:11,491 | INFO     | . log creation = 0 s
[2025-10-11 19:39:37] 2025-10-11 17:20:11,491 | INFO     | ..............................
[2025-10-11 19:39:37] 2025-10-11 17:20:11,517 | INFO     | time since job start (12689s) is within the limit (172800.0s)
[2025-10-11 19:39:37] 2025-10-11 17:20:11,623 | INFO     | 
[2025-10-11 19:39:37] 2025-10-11 17:20:11,624 | INFO     | job summary report
[2025-10-11 19:39:37] 2025-10-11 17:20:11,624 | INFO     | --------------------------------------------------
[2025-10-11 19:39:37] 2025-10-11 17:20:11,624 | INFO     | PanDA job id: 6837363971
[2025-10-11 19:39:37] 2025-10-11 17:20:11,624 | INFO     | task id: 46676269
[2025-10-11 19:39:37] 2025-10-11 17:20:11,624 | INFO     | errors: (none)
[2025-10-11 19:39:37] 2025-10-11 17:20:11,624 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 19:39:37] 2025-10-11 17:20:11,624 | INFO     | pilot state: finished 
[2025-10-11 19:39:37] 2025-10-11 17:20:11,625 | INFO     | transexitcode: 0
[2025-10-11 19:39:37] 2025-10-11 17:20:11,625 | INFO     | exeerrorcode: 0
[2025-10-11 19:39:37] 2025-10-11 17:20:11,625 | INFO     | exeerrordiag: 
[2025-10-11 19:39:37] 2025-10-11 17:20:11,625 | INFO     | exitcode: 0
[2025-10-11 19:39:37] 2025-10-11 17:20:11,625 | INFO     | exitmsg: OK
[2025-10-11 19:39:37] 2025-10-11 17:20:11,625 | INFO     | cpuconsumptiontime: 49065 s
[2025-10-11 19:39:37] 2025-10-11 17:20:11,625 | INFO     | nevents: 400
[2025-10-11 19:39:37] 2025-10-11 17:20:11,625 | INFO     | neventsw: 0
[2025-10-11 19:39:37] 2025-10-11 17:20:11,625 | INFO     | pid: 1771522
[2025-10-11 19:39:37] 2025-10-11 17:20:11,626 | INFO     | pgrp: 1771522
[2025-10-11 19:39:37] 2025-10-11 17:20:11,626 | INFO     | corecount: 4
[2025-10-11 19:39:37] 2025-10-11 17:20:11,626 | INFO     | event service: False
[2025-10-11 19:39:37] 2025-10-11 17:20:11,626 | INFO     | sizes: {0: 2348697, 1: 2348896, 4: 2349158, 11: 2349186, 12666: 2379384, 12667: 2388404, 12669: 2388588, 12674: 2388612}
[2025-10-11 19:39:37] 2025-10-11 17:20:11,626 | INFO     | --------------------------------------------------
[2025-10-11 19:39:37] 2025-10-11 17:20:11,626 | INFO     | 
[2025-10-11 19:39:37] 2025-10-11 17:20:11,626 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-10-11 19:39:37] 2025-10-11 17:20:11,644 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 19:39:37] 2025-10-11 17:20:11,644 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 19:39:37] 2025-10-11 17:20:11,645 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 19:39:37] 2025-10-11 17:20:11,645 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 19:39:37] 2025-10-11 17:20:11,645 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 19:39:37] 2025-10-11 17:20:11,645 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 19:39:37] 2025-10-11 17:20:11,645 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 19:39:37] 2025-10-11 17:20:11,645 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 19:39:37] 2025-10-11 17:20:11,645 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 19:39:37] 2025-10-11 17:20:11,645 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 19:39:37] 2025-10-11 17:20:11,646 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 19:39:37] 2025-10-11 17:20:11,646 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 19:39:37] 2025-10-11 17:20:11,646 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 19:39:37] 2025-10-11 17:20:11,646 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 19:39:37] 2025-10-11 17:20:11,646 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 19:39:37] 2025-10-11 17:20:11,646 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 19:39:37] 2025-10-11 17:20:11,646 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 19:39:37] 2025-10-11 17:20:11,647 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 19:39:37] 2025-10-11 17:20:11,647 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 19:39:37] 2025-10-11 17:20:11,647 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 19:39:37] 2025-10-11 17:20:11,647 | INFO     | job 6837363971 has completed (purged errors)
[2025-10-11 19:39:37] 2025-10-11 17:20:11,647 | INFO     | overall cleanup function is called
[2025-10-11 19:39:37] 2025-10-11 17:20:12,655 | INFO     | --- collectZombieJob: --- 10, [1771522]
[2025-10-11 19:39:37] 2025-10-11 17:20:12,655 | INFO     | zombie collector waiting for pid 1771522
[2025-10-11 19:39:37] 2025-10-11 17:20:12,655 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 19:39:37] 2025-10-11 17:20:12,655 | INFO     | collected zombie processes
[2025-10-11 19:39:37] 2025-10-11 17:20:12,655 | INFO     | will attempt to kill all subprocesses of pid=1771522
[2025-10-11 19:39:37] 2025-10-11 17:20:13,268 | INFO     | PID=1752428 has CPU usage=13.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 19:39:37] 2025-10-11 17:20:13,268 | INFO     | .. there are 2 such processes running
[2025-10-11 19:39:37] 2025-10-11 17:20:13,304 | INFO     | process IDs to be killed: [1771522] (in reverse order)
[2025-10-11 19:39:37] 2025-10-11 17:20:13,381 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 19:39:37] 2025-10-11 17:20:13,381 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 19:39:37] 2025-10-11 17:20:13,390 | INFO     | did not find any defunct processes belonging to 1771522
[2025-10-11 19:39:37] 2025-10-11 17:20:13,397 | INFO     | did not find any defunct processes belonging to 1771522
[2025-10-11 19:39:37] 2025-10-11 17:20:13,398 | INFO     | ready for new job
[2025-10-11 19:39:37] 2025-10-11 17:20:13,398 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 19:39:37] 2025-10-11 17:20:13,400 | INFO     | ***************************************
[2025-10-11 19:39:37] 2025-10-11 17:20:13,400 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 19:39:37] 2025-10-11 17:20:13,400 | INFO     | ***************************************
[2025-10-11 19:39:37] 2025-10-11 17:20:13,400 | INFO     | 
[2025-10-11 19:39:37] 2025-10-11 17:20:13,403 | INFO     | architecture information:
[2025-10-11 19:39:37] 2025-10-11 17:20:13,403 | INFO     | executing command: cat /etc/os-release
[2025-10-11 19:39:37] 2025-10-11 17:20:13,416 | INFO     | cat /etc/os-release:
[2025-10-11 19:39:37] NAME="CentOS Linux"
[2025-10-11 19:39:37] VERSION="7 (Core)"
[2025-10-11 19:39:37] ID="centos"
[2025-10-11 19:39:37] ID_LIKE="rhel fedora"
[2025-10-11 19:39:37] VERSION_ID="7"
[2025-10-11 19:39:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 19:39:37] ANSI_COLOR="0;31"
[2025-10-11 19:39:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 19:39:37] HOME_URL="https://www.centos.org/"
[2025-10-11 19:39:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 19:39:37] 
[2025-10-11 19:39:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 19:39:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 19:39:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 19:39:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 19:39:37] 
[2025-10-11 19:39:37] 2025-10-11 17:20:13,416 | INFO     | ***************************************
[2025-10-11 19:39:37] 2025-10-11 17:20:13,919 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-10-11 19:39:37] 2025-10-11 17:20:13,933 | INFO     | sufficient remaining disk space (1674779295744 B)
[2025-10-11 19:39:37] 2025-10-11 17:20:13,933 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 19:39:37] 2025-10-11 17:20:13,934 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 19:39:37] 2025-10-11 17:20:13,934 | INFO     | update_server=False
[2025-10-11 19:39:37] 2025-10-11 17:20:13,934 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 19:39:37] 2025-10-11 17:20:13,934 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 19:39:37] 2025-10-11 17:20:13,934 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-11 19:39:37] 2025-10-11 17:20:13,935 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 19:39:37] 2025-10-11 17:20:13,935 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 19:39:37] 2025-10-11 17:20:13,935 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 19:39:37] 2025-10-11 17:20:13,936 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 19:39:37] 2025-10-11 17:20:14,535 | INFO     | all payload control threads have been joined
[2025-10-11 19:39:37] 2025-10-11 17:20:14,764 | INFO     | all data control threads have been joined
[2025-10-11 19:39:37] 2025-10-11 17:20:14,778 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:39:37] 2025-10-11 17:20:14,778 | INFO     | aborting loop
[2025-10-11 19:39:37] 2025-10-11 17:20:14,939 | INFO     | [job] retrieve thread has finished
[2025-10-11 19:39:37] 2025-10-11 17:20:15,159 | INFO     | all job control threads have been joined
[2025-10-11 19:39:37] 2025-10-11 17:20:15,441 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 19:39:37] 2025-10-11 17:20:15,540 | INFO     | [payload] control thread has finished
[2025-10-11 19:39:37] 2025-10-11 17:20:15,685 | INFO     | [job] validate thread has finished
[2025-10-11 19:39:37] 2025-10-11 17:20:15,770 | INFO     | [data] control thread has finished
[2025-10-11 19:39:37] 2025-10-11 17:20:15,784 | INFO     | [job] job monitor thread has finished
[2025-10-11 19:39:37] 2025-10-11 17:20:15,796 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 19:39:37] 2025-10-11 17:20:15,818 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 19:39:37] 2025-10-11 17:20:15,883 | INFO     | [data] copytool_in thread has finished
[2025-10-11 19:39:37] 2025-10-11 17:20:15,940 | INFO     | [data] copytool_out thread has finished
[2025-10-11 19:39:37] 2025-10-11 17:20:16,031 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 19:39:37] 2025-10-11 17:20:16,165 | INFO     | [job] control thread has finished
[2025-10-11 19:39:37] 2025-10-11 17:20:16,273 | INFO     | [payload] validate_post thread has finished
[2025-10-11 19:39:37] 2025-10-11 17:20:16,494 | INFO     | [payload] failed_post thread has finished
[2025-10-11 19:39:37] 2025-10-11 17:20:16,609 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:39:37] 2025-10-11 17:20:17,614 | INFO     | [job] queue monitor thread has finished
[2025-10-11 19:39:37] 2025-10-11 17:20:17,941 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 19:39:37] 2025-10-11 17:21:02,795 | INFO     | [monitor] cgroup control has ended
[2025-10-11 19:39:37] 2025-10-11 17:21:03,637 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22797661640512)>', '<ExcThread(monitor, started 22797424232192)>']
[2025-10-11 19:39:37] 2025-10-11 17:21:04,159 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 19:39:37] 2025-10-11 17:21:04,159 | INFO     | [monitor] control thread has ended
[2025-10-11 19:39:37] 2025-10-11 17:21:08,656 | INFO     | all workflow threads have been joined
[2025-10-11 19:39:37] 2025-10-11 17:21:08,657 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 19:39:37] 2025-10-11 17:21:08,657 | INFO     | traces error code: 0
[2025-10-11 19:39:37] 2025-10-11 17:21:08,657 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 19:39:37] 2025-10-11 17:21:08,768 [wrapper] ==== pilot stdout END ====
[2025-10-11 19:39:37] 2025-10-11 17:21:08,770 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 19:39:37] 2025-10-11 17:21:08,772 [wrapper] pilotpid: 1752428
[2025-10-11 19:39:37] 2025-10-11 17:21:08,775 [wrapper] Pilot exit status: 0
[2025-10-11 19:39:37] 2025-10-11 17:21:08,783 [wrapper] pandaids: 6837363971
[2025-10-11 19:39:37] 2025-10-11 17:21:08,836 [wrapper] cleanup supervisor_pilot 1925964 1752429
[2025-10-11 19:39:37] 2025-10-11 17:21:08,838 [wrapper] Test setup, not cleaning
[2025-10-11 19:39:37] 2025-10-11 17:21:08,840 [wrapper] apfmon messages muted
[2025-10-11 19:39:37] 2025-10-11 17:21:08,843 [wrapper] ==== wrapper stdout END ====
[2025-10-11 19:39:37] 2025-10-11 17:21:08,845 [wrapper] ==== wrapper stderr END ====
[2025-10-11 19:39:37]  *** Error codes and diagnostics ***
[2025-10-11 19:39:37]     "exeErrorCode": 0,
[2025-10-11 19:39:37]     "exeErrorDiag": "",
[2025-10-11 19:39:37]     "pilotErrorCode": 0,
[2025-10-11 19:39:37]     "pilotErrorDiag": "",
[2025-10-11 19:39:37]  *** Listing of results directory ***
[2025-10-11 19:39:37] total 414616
[2025-10-11 19:39:37] -rw-r--r-- 1 boinc boinc    557409 Oct  9 23:11 pilot3.tar.gz
[2025-10-11 19:39:37] -rw-r--r-- 1 boinc boinc      5112 Oct  9 23:24 queuedata.json
[2025-10-11 19:39:37] -rwx------ 1 boinc boinc     36292 Oct  9 23:24 runpilot2-wrapper.sh
[2025-10-11 19:39:37] -rw-r--r-- 1 boinc boinc       100 Oct 11 15:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 19:39:37] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 15:48 run_atlas
[2025-10-11 19:39:37] -rw-r--r-- 1 boinc boinc       105 Oct 11 15:48 job.xml
[2025-10-11 19:39:37] -rw-r--r-- 1 boinc boinc      6421 Oct 11 15:48 init_data.xml
[2025-10-11 19:39:37] -rw-r--r-- 2 boinc boinc 220660594 Oct 11 15:48 EVNT.46676267._001114.pool.root.1
[2025-10-11 19:39:37] drwxrwx--x 2 boinc boinc      4096 Oct 11 15:48 shared
[2025-10-11 19:39:37] -rw-r--r-- 2 boinc boinc    569682 Oct 11 15:48 input.tar.gz
[2025-10-11 19:39:37] -rw-r--r-- 2 boinc boinc     15120 Oct 11 15:48 start_atlas.sh
[2025-10-11 19:39:37] -rw-r--r-- 1 boinc boinc         0 Oct 11 15:48 boinc_lockfile
[2025-10-11 19:39:37] -rw-r--r-- 1 boinc boinc      2550 Oct 11 15:48 pandaJob.out
[2025-10-11 19:39:37] -rw------- 1 boinc boinc    975520 Oct 11 15:48 agis_schedconf.cvmfs.json
[2025-10-11 19:39:37] drwx------ 5 boinc boinc      4096 Oct 11 15:48 pilot3
[2025-10-11 19:39:37] -rw------- 1 boinc boinc        95 Oct 11 19:19 pilot_heartbeat.json
[2025-10-11 19:39:37] -rw------- 1 boinc boinc 195571612 Oct 11 19:19 HITS.46676269._026479.pool.root.1
[2025-10-11 19:39:37] -rw-r--r-- 1 boinc boinc       529 Oct 11 19:19 boinc_task_state.xml
[2025-10-11 19:39:37] -rw------- 1 boinc boinc      1034 Oct 11 19:20 memory_monitor_summary.json
[2025-10-11 19:39:37] -rw------- 1 boinc boinc   1560580 Oct 11 19:20 agis_ddmendpoints.agis.ALL.json
[2025-10-11 19:39:37] -rw------- 1 boinc boinc    397465 Oct 11 19:20 log.46676269._026479.job.log.tgz.1
[2025-10-11 19:39:37] -rw------- 1 boinc boinc      7833 Oct 11 19:20 heartbeat.json
[2025-10-11 19:39:37] -rw------- 1 boinc boinc      4563 Oct 11 19:21 pilotlog.txt
[2025-10-11 19:39:37] -rw------- 1 boinc boinc   1817115 Oct 11 19:21 log.46676269._026479.job.log.1
[2025-10-11 19:39:37] -rw------- 1 boinc boinc       357 Oct 11 19:21 output.list
[2025-10-11 19:39:37] -rw-r--r-- 1 boinc boinc       620 Oct 11 19:21 runtime_log
[2025-10-11 19:39:37] -rw------- 1 boinc boinc   2232320 Oct 11 19:21 result.tar.gz
[2025-10-11 19:39:37] -rw-r--r-- 1 boinc boinc      9070 Oct 11 19:21 runtime_log.err
[2025-10-11 19:39:37] -rw------- 1 boinc boinc       665 Oct 11 19:21 JncLDm0IDR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9NbNDmQqf5Qm.diag
[2025-10-11 19:39:37] -rw-r--r-- 1 boinc boinc        26 Oct 11 19:39 wrapper_checkpoint.txt
[2025-10-11 19:39:37] -rw-r--r-- 1 boinc boinc      8192 Oct 11 19:39 boinc_mmap_file
[2025-10-11 19:39:37] -rw-r--r-- 1 boinc boinc     20754 Oct 11 19:39 stderr.txt
[2025-10-11 19:39:37] HITS file was successfully produced:
[2025-10-11 19:39:37] -rw------- 1 boinc boinc 195571612 Oct 11 19:19 shared/HITS.pool.root.1
[2025-10-11 19:39:37]  *** Contents of shared directory: ***
[2025-10-11 19:39:37] total 409244
[2025-10-11 19:39:37] -rw-r--r-- 2 boinc boinc 220660594 Oct 11 15:48 ATLAS.root_0
[2025-10-11 19:39:37] -rw-r--r-- 2 boinc boinc    569682 Oct 11 15:48 input.tar.gz
[2025-10-11 19:39:37] -rw-r--r-- 2 boinc boinc     15120 Oct 11 15:48 start_atlas.sh
[2025-10-11 19:39:37] -rw------- 1 boinc boinc 195571612 Oct 11 19:19 HITS.pool.root.1
[2025-10-11 19:39:37] -rw------- 1 boinc boinc   2232320 Oct 11 19:21 result.tar.gz
19:39:39 (1746896): run_atlas exited; CPU time 49518.481433
19:39:39 (1746896): called boinc_finish(0)

</stderr_txt>
]]>

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