Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:19:16 (989557): wrapper (7.7.26015): starting
19:19:16 (989557): wrapper: running run_atlas (--nthreads 12)
[2025-10-09 19:19:16] Arguments: --nthreads 12
[2025-10-09 19:19:16] Threads: 12
[2025-10-09 19:19:16] Checking for CVMFS
[2025-10-09 19:19:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 19:19:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 19:19:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 19:19:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 19:19:17] 2.11.5.0 2661 28006 213756 151531 2 25 32412495 45568000 17743 130560 0 309663700 99.860 146505710 28512 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-09 19:19:17] CVMFS is ok
[2025-10-09 19:19:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 19:19:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 19:19:17] Further information can be found at the LHC@home message board.
[2025-10-09 19:19:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 19:19:17] Checking for apptainer binary...
[2025-10-09 19:19:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 19:19:17] Running /usr/bin/apptainer --version
[2025-10-09 19:19:17] apptainer version 1.4.1-1.el9
[2025-10-09 19:19:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 19:19:18] wns0062.triumf.lcg
[2025-10-09 19:19:18] apptainer works
[2025-10-09 19:19:18] Set ATHENA_PROC_NUMBER=12
[2025-10-09 19:19:18] Set ATHENA_CORE_NUMBER=12
[2025-10-09 19:19:18] Starting ATLAS job with PandaID=6837376177
[2025-10-09 19:19:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 19:24:51]  *** The last 200 lines of the pilot log: ***
[2025-10-09 19:24:51] 2025-10-10 02:23:43,148 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 19:24:51] 2025-10-10 02:23:43,148 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 19:24:51] 2025-10-10 02:23:43,148 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | WARNING  | wrong length of table data, x=[1760062849.0], y=[21801.0] (must be same and length>=4)
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | INFO     | could have reported an average CPU frequency of 2632 MHz (4 samples)
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | INFO     | ..............................
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | INFO     | . Timing measurements:
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | INFO     | . get job = 0 s
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | INFO     | . initial setup = 3 s
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | INFO     | . payload setup = 15 s
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | INFO     | . stage-in = 0 s
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | INFO     | . payload execution = 53 s
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | INFO     | . stage-out = 0 s
[2025-10-09 19:24:51] 2025-10-10 02:23:43,156 | INFO     | . log creation = 0 s
[2025-10-09 19:24:51] 2025-10-10 02:23:43,156 | INFO     | ..............................
[2025-10-09 19:24:51] 2025-10-10 02:23:43,156 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 19:24:51] 2025-10-10 02:23:43,156 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837376177/pilotlog.txt
[2025-10-09 19:24:51] 2025-10-10 02:23:43,200 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-09 19:24:51] - Log from pilotlog.txt -
[2025-10-09 19:24:51] 2025-10-10 02:23:43,129 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837376177/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 19:24:51] 2025-10-10 02:23:43,147 | INFO     | extracted standard info from prmon json
[2025-10-09 19:24:51] 2025-10-10 02:23:43,148 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 19:24:51] 2025-10-10 02:23:43,148 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 19:24:51] 2025-10-10 02:23:43,148 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 19:24:51] 2025-10-10 02:23:43,148 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | WARNING  | wrong length of table data, x=[1760062849.0], y=[21801.0] (must be same and length>=4)
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | INFO     | could have reported an average CPU frequency of 2632 MHz (4 samples)
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | INFO     | ..............................
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | INFO     | . Timing measurements:
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | INFO     | . get job = 0 s
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | INFO     | . initial setup = 3 s
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | INFO     | . payload setup = 15 s
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | INFO     | . stage-in = 0 s
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | INFO     | . payload execution = 53 s
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | INFO     | . stage-out = 0 s
[2025-10-09 19:24:51] 2025-10-10 02:23:43,156 | INFO     | . log creation = 0 s
[2025-10-09 19:24:51] 2025-10-10 02:23:43,156 | INFO     | ..............................
[2025-10-09 19:24:51] 2025-10-10 02:23:43,156 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 19:24:51] 2025-10-10 02:23:43,156 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837376177/pilotlog.txt
[2025-10-09 19:24:51] 2025-10-10 02:23:43,200 | WARNING  | 
[2025-10-09 19:24:51] [begin log extracts]
[2025-10-09 19:24:51] - Log from pilotlog.txt -
[2025-10-09 19:24:51] 2025-10-10 02:23:43,129 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837376177/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 19:24:51] 2025-10-10 02:23:43,147 | INFO     | extracted standard info from prmon json
[2025-10-09 19:24:51] 2025-10-10 02:23:43,148 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 19:24:51] 2025-10-10 02:23:43,148 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 19:24:51] 2025-10-10 02:23:43,148 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 19:24:51] 2025-10-10 02:23:43,148 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | WARNING  | wrong length of table data, x=[1760062849.0], y=[21801.0] (must be same and length>=4)
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | INFO     | could have reported an average CPU frequency of 2632 MHz (4 samples)
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | INFO     | ..............................
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | INFO     | . Timing measurements:
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | INFO     | . get job = 0 s
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | INFO     | . initial setup = 3 s
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | INFO     | . payload setup = 15 s
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | INFO     | . stage-in = 0 s
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | INFO     | . payload execution = 53 s
[2025-10-09 19:24:51] 2025-10-10 02:23:43,149 | INFO     | . stage-out = 0 s
[2025-10-09 19:24:51] 2025-10-10 02:23:43,156 | INFO     | . log creation = 0 s
[2025-10-09 19:24:51] 2025-10-10 02:23:43,156 | INFO     | ..............................
[2025-10-09 19:24:51] 2025-10-10 02:23:43,156 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 19:24:51] 2025-10-10 02:23:43,156 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837376177/pilotlog.txt
[2025-10-09 19:24:51] [end log extracts]
[2025-10-09 19:24:51] 2025-10-10 02:23:43,201 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-09 19:24:51] 2025-10-10 02:23:43,201 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-09 19:24:51] 2025-10-10 02:23:43,291 | INFO     | 
[2025-10-09 19:24:51] 2025-10-10 02:23:43,291 | INFO     | job summary report
[2025-10-09 19:24:51] 2025-10-10 02:23:43,291 | INFO     | --------------------------------------------------
[2025-10-09 19:24:51] 2025-10-10 02:23:43,291 | INFO     | PanDA job id: 6837376177
[2025-10-09 19:24:51] 2025-10-10 02:23:43,291 | INFO     | task id: 46676269
[2025-10-09 19:24:51] 2025-10-10 02:23:43,291 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-09 19:21:22,420 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-09 19:24:51] 2025-10-10 02:23:43,291 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 19:24:51] 2025-10-10 02:23:43,291 | INFO     | pilot state: failed 
[2025-10-09 19:24:51] 2025-10-10 02:23:43,291 | INFO     | transexitcode: 65
[2025-10-09 19:24:51] 2025-10-10 02:23:43,291 | INFO     | exeerrorcode: 65
[2025-10-09 19:24:51] 2025-10-10 02:23:43,291 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 19:24:51] 2025-10-10 02:23:43,291 | INFO     | exitcode: 65
[2025-10-09 19:24:51] 2025-10-10 02:23:43,291 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 19:24:51] 2025-10-10 02:23:43,291 | INFO     | cpuconsumptiontime: 18 s
[2025-10-09 19:24:51] 2025-10-10 02:23:43,292 | INFO     | nevents: 0
[2025-10-09 19:24:51] 2025-10-10 02:23:43,292 | INFO     | neventsw: 0
[2025-10-09 19:24:51] 2025-10-10 02:23:43,292 | INFO     | pid: 1000222
[2025-10-09 19:24:51] 2025-10-10 02:23:43,294 | INFO     | pgrp: 1000222
[2025-10-09 19:24:51] 2025-10-10 02:23:43,295 | INFO     | corecount: 12
[2025-10-09 19:24:51] 2025-10-10 02:23:43,295 | INFO     | event service: False
[2025-10-09 19:24:51] 2025-10-10 02:23:43,295 | INFO     | sizes: {0: 2348854, 11: 2348854, 12: 2349144, 22: 2349172, 72: 2372406, 73: 2376698, 76: 2376854, 204: 2377048}
[2025-10-09 19:24:51] 2025-10-10 02:23:43,295 | INFO     | --------------------------------------------------
[2025-10-09 19:24:51] 2025-10-10 02:23:43,295 | INFO     | 
[2025-10-09 19:24:51] 2025-10-10 02:23:43,295 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-09 19:24:51] 2025-10-10 02:23:43,313 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 19:24:51] 2025-10-10 02:23:43,313 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 19:24:51] 2025-10-10 02:23:43,313 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 19:24:51] 2025-10-10 02:23:43,313 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 19:24:51] 2025-10-10 02:23:43,313 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 19:24:51] 2025-10-10 02:23:43,314 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 19:24:51] 2025-10-10 02:23:43,314 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 19:24:51] 2025-10-10 02:23:43,314 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 19:24:51] 2025-10-10 02:23:43,314 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 19:24:51] 2025-10-10 02:23:43,314 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 19:24:51] 2025-10-10 02:23:43,314 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 19:24:51] 2025-10-10 02:23:43,314 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 19:24:51] 2025-10-10 02:23:43,314 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 19:24:51] 2025-10-10 02:23:43,314 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 19:24:51] 2025-10-10 02:23:43,314 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 19:24:51] 2025-10-10 02:23:43,314 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 19:24:51] 2025-10-10 02:23:43,314 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 19:24:51] 2025-10-10 02:23:43,314 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 19:24:51] 2025-10-10 02:23:43,314 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 19:24:51] 2025-10-10 02:23:43,314 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 19:24:51] 2025-10-10 02:23:43,314 | INFO     | job 6837376177 has completed (purged errors)
[2025-10-09 19:24:51] 2025-10-10 02:23:43,314 | INFO     | overall cleanup function is called
[2025-10-09 19:24:51] 2025-10-10 02:23:44,320 | INFO     | --- collectZombieJob: --- 10, [1000222]
[2025-10-09 19:24:51] 2025-10-10 02:23:44,320 | INFO     | zombie collector waiting for pid 1000222
[2025-10-09 19:24:51] 2025-10-10 02:23:44,321 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 19:24:51] 2025-10-10 02:23:44,321 | INFO     | collected zombie processes
[2025-10-09 19:24:51] 2025-10-10 02:23:44,321 | INFO     | will attempt to kill all subprocesses of pid=1000222
[2025-10-09 19:24:51] 2025-10-10 02:23:44,567 | INFO     | process IDs to be killed: [1000222] (in reverse order)
[2025-10-09 19:24:51] 2025-10-10 02:23:44,749 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 19:24:51] 2025-10-10 02:23:44,749 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 19:24:51] 2025-10-10 02:23:44,761 | INFO     | did not find any defunct processes belonging to 1000222
[2025-10-09 19:24:51] 2025-10-10 02:23:44,774 | INFO     | did not find any defunct processes belonging to 1000222
[2025-10-09 19:24:51] 2025-10-10 02:23:44,775 | INFO     | ready for new job
[2025-10-09 19:24:51] 2025-10-10 02:23:44,775 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 19:24:51] 2025-10-10 02:23:44,777 | INFO     | ***************************************
[2025-10-09 19:24:51] 2025-10-10 02:23:44,777 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 19:24:51] 2025-10-10 02:23:44,777 | INFO     | ***************************************
[2025-10-09 19:24:51] 2025-10-10 02:23:44,777 | INFO     | 
[2025-10-09 19:24:51] 2025-10-10 02:23:44,780 | INFO     | architecture information:
[2025-10-09 19:24:51] 2025-10-10 02:23:44,781 | INFO     | executing command: cat /etc/os-release
[2025-10-09 19:24:51] 2025-10-10 02:23:44,818 | INFO     | cat /etc/os-release:
[2025-10-09 19:24:51] NAME="CentOS Linux"
[2025-10-09 19:24:51] VERSION="7 (Core)"
[2025-10-09 19:24:51] ID="centos"
[2025-10-09 19:24:51] ID_LIKE="rhel fedora"
[2025-10-09 19:24:51] VERSION_ID="7"
[2025-10-09 19:24:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 19:24:51] ANSI_COLOR="0;31"
[2025-10-09 19:24:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 19:24:51] HOME_URL="https://www.centos.org/"
[2025-10-09 19:24:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 19:24:51] 
[2025-10-09 19:24:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 19:24:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 19:24:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 19:24:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 19:24:51] 
[2025-10-09 19:24:51] 2025-10-10 02:23:44,818 | INFO     | ***************************************
[2025-10-09 19:24:51] 2025-10-10 02:23:45,325 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-09 19:24:51] 2025-10-10 02:23:45,416 | INFO     | sufficient remaining disk space (1811577569280 B)
[2025-10-09 19:24:51] 2025-10-10 02:23:45,417 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 19:24:51] 2025-10-10 02:23:45,417 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 19:24:51] 2025-10-10 02:23:45,417 | INFO     | update_server=False
[2025-10-09 19:24:51] 2025-10-10 02:23:45,417 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 19:24:51] 2025-10-10 02:23:45,417 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 19:24:51] 2025-10-10 02:23:45,457 | INFO     | all data control threads have been joined
[2025-10-09 19:24:51] 2025-10-10 02:23:45,807 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 19:24:51] 2025-10-10 02:23:45,807 | INFO     | aborting loop
[2025-10-09 19:24:51] 2025-10-10 02:23:46,422 | INFO     | [job] retrieve thread has finished
[2025-10-09 19:24:51] 2025-10-10 02:23:46,462 | INFO     | [data] control thread has finished
[2025-10-09 19:24:51] 2025-10-10 02:23:46,599 | INFO     | all job control threads have been joined
[2025-10-09 19:24:51] 2025-10-10 02:23:46,768 | INFO     | [job] validate thread has finished
[2025-10-09 19:24:51] 2025-10-10 02:23:46,772 | INFO     | all payload control threads have been joined
[2025-10-09 19:24:51] 2025-10-10 02:23:46,812 | INFO     | [job] job monitor thread has finished
[2025-10-09 19:24:51] 2025-10-10 02:23:46,827 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 19:24:51] 2025-10-10 02:23:47,287 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 19:24:51] 2025-10-10 02:23:47,306 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 19:24:51] 2025-10-10 02:23:47,372 | INFO     | [payload] failed_post thread has finished
[2025-10-09 19:24:51] 2025-10-10 02:23:47,427 | INFO     | [data] copytool_out thread has finished
[2025-10-09 19:24:51] 2025-10-10 02:23:47,462 | INFO     | [data] copytool_in thread has finished
[2025-10-09 19:24:51] 2025-10-10 02:23:47,605 | INFO     | [job] control thread has finished
[2025-10-09 19:24:51] 2025-10-10 02:23:47,763 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 19:24:51] 2025-10-10 02:23:47,778 | INFO     | [payload] control thread has finished
[2025-10-09 19:24:51] 2025-10-10 02:23:47,858 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 19:24:51] 2025-10-10 02:23:47,929 | INFO     | [payload] validate_post thread has finished
[2025-10-09 19:24:51] 2025-10-10 02:23:48,305 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 19:24:51] 2025-10-10 02:23:49,311 | INFO     | [job] queue monitor thread has finished
[2025-10-09 19:24:51] 2025-10-10 02:23:51,295 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 19:24:51] 2025-10-10 02:24:15,219 | INFO     | PID=993301 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-09 19:24:51] 2025-10-10 02:24:15,219 | INFO     | .. there are 35 such processes running
[2025-10-09 19:24:51] 2025-10-10 02:24:15,221 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 19:24:51] 2025-10-10 02:24:15,221 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 19:24:51] 2025-10-10 02:24:15,221 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 19:24:51] 2025-10-10 02:24:44,533 | INFO     | [monitor] cgroup control has ended
[2025-10-09 19:24:51] 2025-10-10 02:24:45,411 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139795490416448)>', '<ExcThread(monitor, started 139795162433280)>']
[2025-10-09 19:24:51] 2025-10-10 02:24:45,412 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 19:24:51] 2025-10-10 02:24:45,412 | INFO     | [monitor] control thread has ended
[2025-10-09 19:24:51] 2025-10-10 02:24:50,437 | INFO     | all workflow threads have been joined
[2025-10-09 19:24:51] 2025-10-10 02:24:50,437 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 19:24:51] 2025-10-10 02:24:50,437 | INFO     | traces error code: 0
[2025-10-09 19:24:51] 2025-10-10 02:24:50,438 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 19:24:51] 2025-10-10 02:24:50,635 [wrapper] ==== pilot stdout END ====
[2025-10-09 19:24:51] 2025-10-10 02:24:50,638 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 19:24:51] 2025-10-10 02:24:50,640 [wrapper] pilotpid: 993301
[2025-10-09 19:24:51] 2025-10-10 02:24:50,648 [wrapper] Pilot exit status: 0
[2025-10-09 19:24:51] 2025-10-10 02:24:50,698 [wrapper] pandaids: 6837376177
[2025-10-09 19:24:51] 2025-10-10 02:24:50,844 [wrapper] cleanup supervisor_pilot  993307 993302
[2025-10-09 19:24:51] 2025-10-10 02:24:50,859 [wrapper] Test setup, not cleaning
[2025-10-09 19:24:51] 2025-10-10 02:24:50,873 [wrapper] apfmon messages muted
[2025-10-09 19:24:51] 2025-10-10 02:24:50,875 [wrapper] ==== wrapper stdout END ====
[2025-10-09 19:24:51] 2025-10-10 02:24:50,877 [wrapper] ==== wrapper stderr END ====
[2025-10-09 19:24:51]  *** Error codes and diagnostics ***
[2025-10-09 19:24:51]     "exeErrorCode": 65,
[2025-10-09 19:24:51]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 19:24:51]     "pilotErrorCode": 1305,
[2025-10-09 19:24:51]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 19:24:51]  *** Listing of results directory ***
[2025-10-09 19:24:51] total 219364
[2025-10-09 19:24:51] -rw-r--r--. 1 boinc boinc    557409 Oct  9 16:37 pilot3.tar.gz
[2025-10-09 19:24:51] -rwx------. 1 boinc boinc     36292 Oct  9 16:45 runpilot2-wrapper.sh
[2025-10-09 19:24:51] -rw-r--r--. 1 boinc boinc      5112 Oct  9 16:45 queuedata.json
[2025-10-09 19:24:51] -rw-r--r--. 1 boinc boinc       100 Oct  9 19:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 19:24:51] -rwxr-xr-x. 1 boinc boinc      7986 Oct  9 19:19 run_atlas
[2025-10-09 19:24:51] -rw-r--r--. 1 boinc boinc       105 Oct  9 19:19 job.xml
[2025-10-09 19:24:51] -rw-r--r--. 2 boinc boinc     15120 Oct  9 19:19 start_atlas.sh
[2025-10-09 19:24:51] drwxrwx--x. 2 boinc boinc      4096 Oct  9 19:19 shared
[2025-10-09 19:24:51] -rw-r--r--. 2 boinc boinc    569676 Oct  9 19:19 input.tar.gz
[2025-10-09 19:24:51] -rw-r--r--. 1 boinc boinc      6594 Oct  9 19:19 init_data.xml
[2025-10-09 19:24:51] -rw-r--r--. 2 boinc boinc 220492312 Oct  9 19:19 EVNT.46676267._001189.pool.root.1
[2025-10-09 19:24:51] -rw-r--r--. 1 boinc boinc         0 Oct  9 19:19 boinc_lockfile
[2025-10-09 19:24:51] -rw-r--r--. 1 boinc boinc      2550 Oct  9 19:19 pandaJob.out
[2025-10-09 19:24:51] -rw-------. 1 boinc boinc    975454 Oct  9 19:19 agis_schedconf.cvmfs.json
[2025-10-09 19:24:51] -rw-------. 1 boinc boinc   1560580 Oct  9 19:19 agis_ddmendpoints.agis.ALL.json
[2025-10-09 19:24:51] drwx------. 5 boinc boinc      4096 Oct  9 19:19 pilot3
[2025-10-09 19:24:51] -rw-r--r--. 1 boinc boinc       523 Oct  9 19:21 boinc_task_state.xml
[2025-10-09 19:24:51] -rw-------. 1 boinc boinc       963 Oct  9 19:21 memory_monitor_summary.json
[2025-10-09 19:24:51] -rw-------. 1 boinc boinc     21594 Oct  9 19:21 log.46676269._028359.job.log.tgz.1
[2025-10-09 19:24:51] -rw-------. 1 boinc boinc      8411 Oct  9 19:23 heartbeat.json
[2025-10-09 19:24:51] -rw-------. 1 boinc boinc        95 Oct  9 19:24 pilot_heartbeat.json
[2025-10-09 19:24:51] -rw-r--r--. 1 boinc boinc        22 Oct  9 19:24 wrapper_checkpoint.txt
[2025-10-09 19:24:51] -rw-r--r--. 1 boinc boinc      8192 Oct  9 19:24 boinc_mmap_file
[2025-10-09 19:24:51] -rw-------. 1 boinc boinc      4822 Oct  9 19:24 pilotlog.txt
[2025-10-09 19:24:51] -rw-------. 1 boinc boinc     91523 Oct  9 19:24 log.46676269._028359.job.log.1
[2025-10-09 19:24:51] -rw-------. 1 boinc boinc       188 Oct  9 19:24 output.list
[2025-10-09 19:24:51] -rw-r--r--. 1 boinc boinc       620 Oct  9 19:24 runtime_log
[2025-10-09 19:24:51] -rw-------. 1 boinc boinc    133120 Oct  9 19:24 result.tar.gz
[2025-10-09 19:24:51] -rw-r--r--. 1 boinc boinc      8528 Oct  9 19:24 runtime_log.err
[2025-10-09 19:24:51] -rw-------. 1 boinc boinc       647 Oct  9 19:24 9NLNDmaVFR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYfbNDmLKox8m.diag
[2025-10-09 19:24:51] -rw-r--r--. 1 boinc boinc     21789 Oct  9 19:24 stderr.txt
[2025-10-09 19:24:51] No HITS result produced
[2025-10-09 19:24:51]  *** Contents of shared directory: ***
[2025-10-09 19:24:51] total 216040
[2025-10-09 19:24:51] -rw-r--r--. 2 boinc boinc     15120 Oct  9 19:19 start_atlas.sh
[2025-10-09 19:24:51] -rw-r--r--. 2 boinc boinc    569676 Oct  9 19:19 input.tar.gz
[2025-10-09 19:24:51] -rw-r--r--. 2 boinc boinc 220492312 Oct  9 19:19 ATLAS.root_0
[2025-10-09 19:24:51] -rw-------. 1 boinc boinc    133120 Oct  9 19:24 result.tar.gz
19:24:53 (989557): run_atlas exited; CPU time 25.990337
19:24:53 (989557): called boinc_finish(0)

</stderr_txt>
]]>

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