Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:17 (3708984): wrapper (7.7.26015): starting
00:02:17 (3708984): wrapper: running run_atlas (--nthreads 9)
[2025-10-10 00:02:17] Arguments: --nthreads 9
[2025-10-10 00:02:17] Threads: 9
[2025-10-10 00:02:17] Checking for CVMFS
[2025-10-10 00:02:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 00:02:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 00:02:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 00:02:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 00:02:20] 2.13.2.0 128817 105767 1552048 151533 3 178 26429805 39288832 19122 16776704 1 130658098 99.550 164579010 29938 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 00:02:20] CVMFS is ok
[2025-10-10 00:02:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 00:02:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 00:02:21] Further information can be found at the LHC@home message board.
[2025-10-10 00:02:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 00:02:21] Checking for apptainer binary...
[2025-10-10 00:02:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 00:02:21] Running /usr/bin/apptainer --version
[2025-10-10 00:02:21] apptainer version 1.4.3-1.el9
[2025-10-10 00:02:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 00:02:23] c-211-21.aglt2.org
[2025-10-10 00:02:23] apptainer works
[2025-10-10 00:02:23] Set ATHENA_PROC_NUMBER=9
[2025-10-10 00:02:23] Set ATHENA_CORE_NUMBER=9
[2025-10-10 00:02:23] Starting ATLAS job with PandaID=6837362703
[2025-10-10 00:02:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 21:46:43]  *** The last 200 lines of the pilot log: ***
[2025-10-10 21:46:43] 2025-10-11 01:45:33,797 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 21:46:43] 2025-10-11 01:45:33,797 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 21:46:43] 2025-10-11 01:45:33,902 | INFO     | fitting pss+swap vs Time
[2025-10-10 21:46:43] 2025-10-11 01:45:33,914 | INFO     | sum of square deviations: 644173216143.7148
[2025-10-10 21:46:43] 2025-10-11 01:45:34,237 | INFO     | sum of deviations: 489520652004.9649
[2025-10-10 21:46:43] 2025-10-11 01:45:34,238 | INFO     | mean x: 1760108196.405956
[2025-10-10 21:46:43] 2025-10-11 01:45:34,238 | INFO     | mean y: 2558106.2413793104
[2025-10-10 21:46:43] 2025-10-11 01:45:34,238 | INFO     | -- intersect: -1334984794.1944277
[2025-10-10 21:46:43] 2025-10-11 01:45:34,238 | INFO     | intersect: -1334984794.1944277
[2025-10-10 21:46:43] 2025-10-11 01:45:34,251 | INFO     | chi2: 4.237892777246232
[2025-10-10 21:46:43] 2025-10-11 01:45:34,253 | INFO     | sum of square deviations: 636630152864.596
[2025-10-10 21:46:43] 2025-10-11 01:45:34,425 | INFO     | sum of deviations: 747020024495.22
[2025-10-10 21:46:43] 2025-10-11 01:45:34,425 | INFO     | mean x: 1760108043.9095201
[2025-10-10 21:46:43] 2025-10-11 01:45:34,426 | INFO     | mean y: 2563304.0975609757
[2025-10-10 21:46:43] 2025-10-11 01:45:34,439 | INFO     | -- intersect: -2062742506.7555017
[2025-10-10 21:46:43] 2025-10-11 01:45:34,439 | INFO     | intersect: -2062742506.7555017
[2025-10-10 21:46:43] 2025-10-11 01:45:34,441 | INFO     | chi2: 1.9563037008920068
[2025-10-10 21:46:43] 2025-10-11 01:45:34,441 | INFO     | current chi2=1.9563037008920068 (change=53.8378197911084 %)
[2025-10-10 21:46:43] 2025-10-11 01:45:34,443 | INFO     | sum of square deviations: 629146129442.7678
[2025-10-10 21:46:43] 2025-10-11 01:45:34,462 | INFO     | time since job start (78035s) is within the limit (172800.0s)
[2025-10-10 21:46:43] 2025-10-11 01:45:34,621 | INFO     | sum of deviations: 742810768934.8877
[2025-10-10 21:46:43] 2025-10-11 01:45:34,622 | INFO     | mean x: 1760107891.4123223
[2025-10-10 21:46:43] 2025-10-11 01:45:34,622 | INFO     | mean y: 2563218.327804107
[2025-10-10 21:46:43] 2025-10-11 01:45:34,622 | INFO     | -- intersect: -2075534436.64201
[2025-10-10 21:46:43] 2025-10-11 01:45:34,622 | INFO     | intersect: -2075534436.64201
[2025-10-10 21:46:43] 2025-10-11 01:45:34,624 | INFO     | chi2: 1.9561467919700204
[2025-10-10 21:46:43] 2025-10-11 01:45:34,624 | INFO     | current chi2=1.9561467919700204 (change=0.008020683185072043 %)
[2025-10-10 21:46:43] 2025-10-11 01:45:34,625 | INFO     | right removable region: 1265
[2025-10-10 21:46:43] 2025-10-11 01:45:34,626 | INFO     | sum of square deviations: 636629447704.5951
[2025-10-10 21:46:43] 2025-10-11 01:45:34,682 | INFO     | sum of deviations: 226274146494.05023
[2025-10-10 21:46:43] 2025-10-11 01:45:34,682 | INFO     | mean x: 1760108348.9095201
[2025-10-10 21:46:43] 2025-10-11 01:45:34,682 | INFO     | mean y: 2563421.409126672
[2025-10-10 21:46:43] 2025-10-11 01:45:34,683 | INFO     | -- intersect: -623023434.2139187
[2025-10-10 21:46:43] 2025-10-11 01:45:34,683 | INFO     | intersect: -623023434.2139187
[2025-10-10 21:46:43] 2025-10-11 01:45:34,684 | INFO     | chi2: 2.4045195077926738
[2025-10-10 21:46:43] 2025-10-11 01:45:34,685 | INFO     | current chi2=2.4045195077926738 (change=43.2614359498939 %)
[2025-10-10 21:46:43] 2025-10-11 01:45:34,687 | INFO     | sum of square deviations: 629144796652.9417
[2025-10-10 21:46:43] 2025-10-11 01:45:34,788 | INFO     | sum of deviations: 157709771601.43085
[2025-10-10 21:46:43] 2025-10-11 01:45:34,788 | INFO     | mean x: 1760108501.4131122
[2025-10-10 21:46:43] 2025-10-11 01:45:34,788 | INFO     | mean y: 2564818.5402843603
[2025-10-10 21:46:43] 2025-10-11 01:45:34,788 | INFO     | -- intersect: -438647301.8306722
[2025-10-10 21:46:43] 2025-10-11 01:45:34,789 | INFO     | intersect: -438647301.8306722
[2025-10-10 21:46:43] 2025-10-11 01:45:34,804 | INFO     | chi2: 2.3188075104846986
[2025-10-10 21:46:43] 2025-10-11 01:45:34,804 | INFO     | current chi2=2.3188075104846986 (change=3.564620583455278 %)
[2025-10-10 21:46:43] 2025-10-11 01:45:34,804 | INFO     | left removable region: 20
[2025-10-10 21:46:43] 2025-10-11 01:45:34,806 | INFO     | sum of square deviations: 598351357328.5963
[2025-10-10 21:46:43] 2025-10-11 01:45:35,004 | INFO     | sum of deviations: 396311425356.9034
[2025-10-10 21:46:43] 2025-10-11 01:45:35,004 | INFO     | mean x: 1760108470.9228916
[2025-10-10 21:46:43] 2025-10-11 01:45:35,004 | INFO     | mean y: 2570321.5823293175
[2025-10-10 21:46:43] 2025-10-11 01:45:35,005 | INFO     | -- intersect: -1163218120.8614256
[2025-10-10 21:46:43] 2025-10-11 01:45:35,005 | INFO     | intersect: -1163218120.8614256
[2025-10-10 21:46:43] 2025-10-11 01:45:35,007 | INFO     | chi2: 0.025077906048629164
[2025-10-10 21:46:43] 2025-10-11 01:45:35,007 | INFO     | -- intersect: -1163218120.8614256
[2025-10-10 21:46:43] 2025-10-11 01:45:35,007 | INFO     | current memory leak: 0.66 B/s (using 1245 data points, chi2=0.03)
[2025-10-10 21:46:43] 2025-10-11 01:45:35,032 | INFO     | could have reported an average CPU frequency of 2899 MHz (46 samples)
[2025-10-10 21:46:43] 2025-10-11 01:45:35,033 | INFO     | ..............................
[2025-10-10 21:46:43] 2025-10-11 01:45:35,033 | INFO     | . Timing measurements:
[2025-10-10 21:46:43] 2025-10-11 01:45:35,033 | INFO     | . get job = 3 s
[2025-10-10 21:46:43] 2025-10-11 01:45:35,033 | INFO     | . initial setup = 12 s
[2025-10-10 21:46:43] 2025-10-11 01:45:35,033 | INFO     | . payload setup = 44 s
[2025-10-10 21:46:43] 2025-10-11 01:45:35,033 | INFO     | . stage-in = 1 s
[2025-10-10 21:46:43] 2025-10-11 01:45:35,034 | INFO     | . payload execution = 77808 s
[2025-10-10 21:46:43] 2025-10-11 01:45:35,034 | INFO     | . stage-out = 5 s
[2025-10-10 21:46:43] 2025-10-11 01:45:35,034 | INFO     | . log creation = 0 s
[2025-10-10 21:46:43] 2025-10-11 01:45:35,053 | INFO     | ..............................
[2025-10-10 21:46:43] 2025-10-11 01:45:35,308 | INFO     | 
[2025-10-10 21:46:43] 2025-10-11 01:45:35,309 | INFO     | job summary report
[2025-10-10 21:46:43] 2025-10-11 01:45:35,309 | INFO     | --------------------------------------------------
[2025-10-10 21:46:43] 2025-10-11 01:45:35,309 | INFO     | PanDA job id: 6837362703
[2025-10-10 21:46:43] 2025-10-11 01:45:35,309 | INFO     | task id: 46676269
[2025-10-10 21:46:43] 2025-10-11 01:45:35,309 | INFO     | errors: (none)
[2025-10-10 21:46:43] 2025-10-11 01:45:35,309 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 21:46:43] 2025-10-11 01:45:35,309 | INFO     | pilot state: finished 
[2025-10-10 21:46:43] 2025-10-11 01:45:35,310 | INFO     | transexitcode: 0
[2025-10-10 21:46:43] 2025-10-11 01:45:35,310 | INFO     | exeerrorcode: 0
[2025-10-10 21:46:43] 2025-10-11 01:45:35,310 | INFO     | exeerrordiag: 
[2025-10-10 21:46:43] 2025-10-11 01:45:35,310 | INFO     | exitcode: 0
[2025-10-10 21:46:43] 2025-10-11 01:45:35,310 | INFO     | exitmsg: OK
[2025-10-10 21:46:43] 2025-10-11 01:45:35,310 | INFO     | cpuconsumptiontime: 77234 s
[2025-10-10 21:46:43] 2025-10-11 01:45:35,311 | INFO     | nevents: 400
[2025-10-10 21:46:43] 2025-10-11 01:45:35,311 | INFO     | neventsw: 0
[2025-10-10 21:46:43] 2025-10-11 01:45:35,311 | INFO     | pid: 3754217
[2025-10-10 21:46:43] 2025-10-11 01:45:35,311 | INFO     | pgrp: 3754217
[2025-10-10 21:46:43] 2025-10-11 01:45:35,311 | INFO     | corecount: 9
[2025-10-10 21:46:43] 2025-10-11 01:45:35,311 | INFO     | event service: False
[2025-10-10 21:46:43] 2025-10-11 01:45:35,311 | INFO     | sizes: {0: 2348023, 1: 2348624, 2: 2348708, 3: 2348736, 4: 2348764, 5: 2348764, 7: 2349119, 9: 2349147, 22: 2349175, 34: 2349203, 46: 2349231, 57: 2349539, 68: 234
[2025-10-10 21:46:43] 2025-10-11 01:45:35,312 | INFO     | --------------------------------------------------
[2025-10-10 21:46:43] 2025-10-11 01:45:35,312 | INFO     | 
[2025-10-10 21:46:43] 2025-10-11 01:45:35,312 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-10 21:46:43] 2025-10-11 01:45:35,340 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 21:46:43] 2025-10-11 01:45:35,341 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 21:46:43] 2025-10-11 01:45:35,341 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 21:46:43] 2025-10-11 01:45:35,341 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 21:46:43] 2025-10-11 01:45:35,341 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 21:46:43] 2025-10-11 01:45:35,341 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 21:46:43] 2025-10-11 01:45:35,341 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 21:46:43] 2025-10-11 01:45:35,342 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 21:46:43] 2025-10-11 01:45:35,342 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 21:46:43] 2025-10-11 01:45:35,342 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 21:46:43] 2025-10-11 01:45:35,342 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 21:46:43] 2025-10-11 01:45:35,342 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 21:46:43] 2025-10-11 01:45:35,342 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 21:46:43] 2025-10-11 01:45:35,343 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 21:46:43] 2025-10-11 01:45:35,343 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 21:46:43] 2025-10-11 01:45:35,343 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 21:46:43] 2025-10-11 01:45:35,343 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 21:46:43] 2025-10-11 01:45:35,343 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 21:46:43] 2025-10-11 01:45:35,343 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 21:46:43] 2025-10-11 01:45:35,344 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 21:46:43] 2025-10-11 01:45:35,346 | INFO     | job 6837362703 has completed (purged errors)
[2025-10-10 21:46:43] 2025-10-11 01:45:35,346 | INFO     | overall cleanup function is called
[2025-10-10 21:46:43] 2025-10-11 01:45:36,382 | INFO     | --- collectZombieJob: --- 10, [3754217]
[2025-10-10 21:46:43] 2025-10-11 01:45:36,382 | INFO     | zombie collector waiting for pid 3754217
[2025-10-10 21:46:43] 2025-10-11 01:45:36,382 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 21:46:43] 2025-10-11 01:45:36,382 | INFO     | collected zombie processes
[2025-10-10 21:46:43] 2025-10-11 01:45:36,383 | INFO     | will attempt to kill all subprocesses of pid=3754217
[2025-10-10 21:46:43] 2025-10-11 01:45:37,756 | INFO     | process IDs to be killed: [3754217] (in reverse order)
[2025-10-10 21:46:43] 2025-10-11 01:45:38,017 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 21:46:43] 2025-10-11 01:45:38,018 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 21:46:43] 2025-10-11 01:45:38,036 | INFO     | did not find any defunct processes belonging to 3754217
[2025-10-10 21:46:43] 2025-10-11 01:45:38,055 | INFO     | did not find any defunct processes belonging to 3754217
[2025-10-10 21:46:43] 2025-10-11 01:45:38,055 | INFO     | ready for new job
[2025-10-10 21:46:43] 2025-10-11 01:45:38,056 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 21:46:43] 2025-10-11 01:45:38,061 | INFO     | ***************************************
[2025-10-10 21:46:43] 2025-10-11 01:45:38,062 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 21:46:43] 2025-10-11 01:45:38,062 | INFO     | ***************************************
[2025-10-10 21:46:43] 2025-10-11 01:45:38,062 | INFO     | 
[2025-10-10 21:46:43] 2025-10-11 01:45:38,064 | INFO     | architecture information:
[2025-10-10 21:46:43] 2025-10-11 01:45:38,064 | INFO     | executing command: cat /etc/os-release
[2025-10-10 21:46:43] 2025-10-11 01:45:38,129 | INFO     | cat /etc/os-release:
[2025-10-10 21:46:43] NAME="CentOS Linux"
[2025-10-10 21:46:43] VERSION="7 (Core)"
[2025-10-10 21:46:43] ID="centos"
[2025-10-10 21:46:43] ID_LIKE="rhel fedora"
[2025-10-10 21:46:43] VERSION_ID="7"
[2025-10-10 21:46:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 21:46:43] ANSI_COLOR="0;31"
[2025-10-10 21:46:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 21:46:43] HOME_URL="https://www.centos.org/"
[2025-10-10 21:46:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 21:46:43] 
[2025-10-10 21:46:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 21:46:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 21:46:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 21:46:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 21:46:43] 
[2025-10-10 21:46:43] 2025-10-11 01:45:38,129 | INFO     | ***************************************
[2025-10-10 21:46:43] 2025-10-11 01:45:38,635 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-10 21:46:43] 2025-10-11 01:45:38,740 | INFO     | sufficient remaining disk space (52952039424 B)
[2025-10-10 21:46:43] 2025-10-11 01:45:38,741 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 21:46:43] 2025-10-11 01:45:38,741 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 21:46:43] 2025-10-11 01:45:38,741 | INFO     | update_server=False
[2025-10-10 21:46:43] 2025-10-11 01:45:38,741 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 21:46:43] 2025-10-11 01:45:38,743 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 21:46:43] 2025-10-11 01:45:39,012 | INFO     | all payload control threads have been joined
[2025-10-10 21:46:43] 2025-10-11 01:45:39,381 | INFO     | all job control threads have been joined
[2025-10-10 21:46:43] 2025-10-11 01:45:39,579 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 21:46:43] 2025-10-11 01:45:39,579 | INFO     | aborting loop
[2025-10-10 21:46:43] 2025-10-11 01:45:39,746 | INFO     | all data control threads have been joined
[2025-10-10 21:46:43] 2025-10-11 01:45:39,757 | INFO     | [job] retrieve thread has finished
[2025-10-10 21:46:43] 2025-10-11 01:45:40,018 | INFO     | [payload] control thread has finished
[2025-10-10 21:46:43] 2025-10-11 01:45:40,043 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 21:46:43] 2025-10-11 01:45:40,077 | INFO     | [job] validate thread has finished
[2025-10-10 21:46:43] 2025-10-11 01:45:40,121 | INFO     | [data] copytool_in thread has finished
[2025-10-10 21:46:43] 2025-10-11 01:45:40,134 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 21:46:43] 2025-10-11 01:45:40,275 | INFO     | [payload] failed_post thread has finished
[2025-10-10 21:46:43] 2025-10-11 01:45:40,344 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 21:46:43] 2025-10-11 01:45:40,393 | INFO     | [job] control thread has finished
[2025-10-10 21:46:43] 2025-10-11 01:45:40,585 | INFO     | [job] job monitor thread has finished
[2025-10-10 21:46:43] 2025-10-11 01:45:40,735 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 21:46:43] 2025-10-11 01:45:40,752 | INFO     | [data] control thread has finished
[2025-10-10 21:46:43] 2025-10-11 01:45:40,802 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 21:46:43] 2025-10-11 01:45:40,802 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 21:46:43] 2025-10-11 01:45:40,960 | INFO     | [payload] validate_post thread has finished
[2025-10-10 21:46:43] 2025-10-11 01:45:41,350 | INFO     | [job] queue monitor thread has finished
[2025-10-10 21:46:43] 2025-10-11 01:45:42,150 | INFO     | [data] copytool_out thread has finished
[2025-10-10 21:46:43] 2025-10-11 01:45:42,767 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 21:46:43] 2025-10-11 01:46:08,822 | INFO     | PID=3729490 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 21:46:43] 2025-10-11 01:46:08,822 | INFO     | .. there are 25 such processes running
[2025-10-10 21:46:43] 2025-10-11 01:46:08,823 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 21:46:43] 2025-10-11 01:46:08,823 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 21:46:43] 2025-10-11 01:46:08,824 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 21:46:43] 2025-10-11 01:46:35,215 | INFO     | [monitor] cgroup control has ended
[2025-10-10 21:46:43] 2025-10-11 01:46:36,978 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139668918671168)>', '<ExcThread(monitor, started 139667823384320)>']
[2025-10-10 21:46:43] 2025-10-11 01:46:37,035 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 21:46:43] 2025-10-11 01:46:37,035 | INFO     | [monitor] control thread has ended
[2025-10-10 21:46:43] 2025-10-11 01:46:42,004 | INFO     | all workflow threads have been joined
[2025-10-10 21:46:43] 2025-10-11 01:46:42,008 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 21:46:43] 2025-10-11 01:46:42,009 | INFO     | traces error code: 0
[2025-10-10 21:46:43] 2025-10-11 01:46:42,009 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 21:46:43] 2025-10-11 01:46:42,193 [wrapper] ==== pilot stdout END ====
[2025-10-10 21:46:43] 2025-10-11 01:46:42,196 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 21:46:43] 2025-10-11 01:46:42,199 [wrapper] pilotpid: 3729490
[2025-10-10 21:46:43] 2025-10-11 01:46:42,202 [wrapper] Pilot exit status: 0
[2025-10-10 21:46:43] 2025-10-11 01:46:42,275 [wrapper] pandaids: 6837362703
[2025-10-10 21:46:43] 2025-10-11 01:46:42,626 [wrapper] cleanup supervisor_pilot  730723 3729491
[2025-10-10 21:46:43] 2025-10-11 01:46:42,650 [wrapper] Test setup, not cleaning
[2025-10-10 21:46:43] 2025-10-11 01:46:42,710 [wrapper] apfmon messages muted
[2025-10-10 21:46:43] 2025-10-11 01:46:42,727 [wrapper] ==== wrapper stdout END ====
[2025-10-10 21:46:43] 2025-10-11 01:46:42,748 [wrapper] ==== wrapper stderr END ====
[2025-10-10 21:46:43]  *** Error codes and diagnostics ***
[2025-10-10 21:46:43]     "exeErrorCode": 0,
[2025-10-10 21:46:43]     "exeErrorDiag": "",
[2025-10-10 21:46:43]     "pilotErrorCode": 0,
[2025-10-10 21:46:43]     "pilotErrorDiag": "",
[2025-10-10 21:46:43]  *** Listing of results directory ***
[2025-10-10 21:46:43] total 422868
[2025-10-10 21:46:43] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 16:22 pilot3.tar.gz
[2025-10-10 21:46:43] -rwx------. 1 boincer umatlas     36292 Oct  9 16:27 runpilot2-wrapper.sh
[2025-10-10 21:46:43] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 16:27 queuedata.json
[2025-10-10 21:46:43] -rw-r--r--. 1 boincer umatlas       100 Oct 10 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 21:46:43] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 00:02 run_atlas
[2025-10-10 21:46:43] -rw-r--r--. 1 boincer umatlas       105 Oct 10 00:02 job.xml
[2025-10-10 21:46:43] -rw-r--r--. 2 boincer umatlas 219907288 Oct 10 00:02 EVNT.46676267._001089.pool.root.1
[2025-10-10 21:46:43] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 00:02 start_atlas.sh
[2025-10-10 21:46:43] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 00:02 shared
[2025-10-10 21:46:43] -rw-r--r--. 2 boincer umatlas    569677 Oct 10 00:02 input.tar.gz
[2025-10-10 21:46:43] -rw-r--r--. 1 boincer umatlas         0 Oct 10 00:02 boinc_lockfile
[2025-10-10 21:46:43] -rw-r--r--. 1 boincer umatlas      2547 Oct 10 00:02 pandaJob.out
[2025-10-10 21:46:43] -rw-------. 1 boincer umatlas    975454 Oct 10 00:04 agis_schedconf.cvmfs.json
[2025-10-10 21:46:43] drwx------. 5 boincer umatlas      4096 Oct 10 00:05 pilot3
[2025-10-10 21:46:43] -rw-------. 1 boincer umatlas 189474529 Oct 10 21:42 HITS.46676269._025831.pool.root.1
[2025-10-10 21:46:43] -rw-r--r--. 1 boincer umatlas       531 Oct 10 21:42 boinc_task_state.xml
[2025-10-10 21:46:43] -rw-------. 1 boincer umatlas      1045 Oct 10 21:44 memory_monitor_summary.json
[2025-10-10 21:46:43] -rw-------. 1 boincer umatlas   1560580 Oct 10 21:45 agis_ddmendpoints.agis.ALL.json
[2025-10-10 21:46:43] -rw-------. 1 boincer umatlas   1187065 Oct 10 21:45 log.46676269._025831.job.log.tgz.1
[2025-10-10 21:46:43] -rw-r--r--. 1 boincer umatlas      6525 Oct 10 21:45 init_data.xml
[2025-10-10 21:46:43] -rw-------. 1 boincer umatlas      7827 Oct 10 21:45 heartbeat.json
[2025-10-10 21:46:43] -rw-------. 1 boincer umatlas        95 Oct 10 21:46 pilot_heartbeat.json
[2025-10-10 21:46:43] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 21:46 boinc_mmap_file
[2025-10-10 21:46:43] -rw-r--r--. 1 boincer umatlas        28 Oct 10 21:46 wrapper_checkpoint.txt
[2025-10-10 21:46:43] -rw-------. 1 boincer umatlas      4824 Oct 10 21:46 pilotlog.txt
[2025-10-10 21:46:43] -rw-------. 1 boincer umatlas   8676409 Oct 10 21:46 log.46676269._025831.job.log.1
[2025-10-10 21:46:43] -rw-------. 1 boincer umatlas       357 Oct 10 21:46 output.list
[2025-10-10 21:46:43] -rw-r--r--. 1 boincer umatlas       620 Oct 10 21:46 runtime_log
[2025-10-10 21:46:43] -rw-------. 1 boincer umatlas   9881600 Oct 10 21:46 result.tar.gz
[2025-10-10 21:46:43] -rw-r--r--. 1 boincer umatlas      8704 Oct 10 21:46 runtime_log.err
[2025-10-10 21:46:43] -rw-------. 1 boincer umatlas       658 Oct 10 21:46 pwWKDmsPCR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoGbNDm9AL9dm.diag
[2025-10-10 21:46:43] -rw-r--r--. 1 boincer umatlas     21057 Oct 10 21:46 stderr.txt
[2025-10-10 21:46:43] HITS file was successfully produced:
[2025-10-10 21:46:43] -rw-------. 1 boincer umatlas 189474529 Oct 10 21:42 shared/HITS.pool.root.1
[2025-10-10 21:46:43]  *** Contents of shared directory: ***
[2025-10-10 21:46:43] total 410028
[2025-10-10 21:46:43] -rw-r--r--. 2 boincer umatlas 219907288 Oct 10 00:02 ATLAS.root_0
[2025-10-10 21:46:43] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 00:02 start_atlas.sh
[2025-10-10 21:46:43] -rw-r--r--. 2 boincer umatlas    569677 Oct 10 00:02 input.tar.gz
[2025-10-10 21:46:43] -rw-------. 1 boincer umatlas 189474529 Oct 10 21:42 HITS.pool.root.1
[2025-10-10 21:46:43] -rw-------. 1 boincer umatlas   9881600 Oct 10 21:46 result.tar.gz
21:46:45 (3708984): run_atlas exited; CPU time 81085.347872
21:46:45 (3708984): called boinc_finish(0)

</stderr_txt>
]]>

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