Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:46:12 (3708805): wrapper (7.7.26015): starting
21:46:12 (3708805): wrapper: running run_atlas (--nthreads 9)
[2025-10-09 21:46:13] Arguments: --nthreads 9
[2025-10-09 21:46:13] Threads: 9
[2025-10-09 21:46:13] Checking for CVMFS
[2025-10-09 21:46:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 21:46:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 21:46:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 21:46:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 21:46:15] 2.13.2.0 3269412 32205 367300 151529 3 691 34000805 40960000 61071 16776704 0 396491523 99.832 173647964 37065 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-09 21:46:15] CVMFS is ok
[2025-10-09 21:46:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 21:46:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 21:46:15] Further information can be found at the LHC@home message board.
[2025-10-09 21:46:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 21:46:15] Checking for apptainer binary...
[2025-10-09 21:46:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 21:46:15] Running /usr/bin/apptainer --version
[2025-10-09 21:46:15] apptainer version 1.4.3-1.el9
[2025-10-09 21:46:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 21:46:15] c8-16-2.aglt2.org
[2025-10-09 21:46:15] apptainer works
[2025-10-09 21:46:15] Set ATHENA_PROC_NUMBER=9
[2025-10-09 21:46:15] Set ATHENA_CORE_NUMBER=9
[2025-10-09 21:46:16] Starting ATLAS job with PandaID=6837350467
[2025-10-09 21:46:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 23:06:00]  *** The last 200 lines of the pilot log: ***
[2025-10-09 23:06:00] 2025-10-10 03:05:01,012 | INFO     | time since job start (4644s) is within the limit (172800.0s)
[2025-10-09 23:06:00] 2025-10-10 03:05:01,637 | INFO     | monitor loop #298: job 0:6837350467 is in state 'finished'
[2025-10-09 23:06:00] 2025-10-10 03:05:01,637 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 23:06:00] 2025-10-10 03:05:03,039 | INFO     | time since job start (4646s) is within the limit (172800.0s)
[2025-10-09 23:06:00] 2025-10-10 03:05:04,142 | INFO     | monitor loop #299: job 0:6837350467 is in state 'finished'
[2025-10-09 23:06:00] 2025-10-10 03:05:04,142 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 23:06:00] 2025-10-10 03:05:05,047 | INFO     | time since job start (4648s) is within the limit (172800.0s)
[2025-10-09 23:06:00] 2025-10-10 03:05:06,648 | INFO     | monitor loop #300: job 0:6837350467 is in state 'finished'
[2025-10-09 23:06:00] 2025-10-10 03:05:06,648 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 23:06:00] 2025-10-10 03:05:07,054 | INFO     | time since job start (4650s) is within the limit (172800.0s)
[2025-10-09 23:06:00] 2025-10-10 03:05:09,061 | INFO     | time since job start (4652s) is within the limit (172800.0s)
[2025-10-09 23:06:00] 2025-10-10 03:05:09,153 | INFO     | monitor loop #301: job 0:6837350467 is in state 'finished'
[2025-10-09 23:06:00] 2025-10-10 03:05:09,153 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 23:06:00] 2025-10-10 03:05:11,086 | INFO     | time since job start (4654s) is within the limit (172800.0s)
[2025-10-09 23:06:00] 2025-10-10 03:05:11,672 | INFO     | monitor loop #302: job 0:6837350467 is in state 'finished'
[2025-10-09 23:06:00] 2025-10-10 03:05:11,672 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 23:06:00] 2025-10-10 03:05:13,092 | INFO     | time since job start (4656s) is within the limit (172800.0s)
[2025-10-09 23:06:00] 2025-10-10 03:05:14,177 | INFO     | monitor loop #303: job 0:6837350467 is in state 'finished'
[2025-10-09 23:06:00] 2025-10-10 03:05:14,177 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 23:06:00] 2025-10-10 03:05:15,098 | INFO     | time since job start (4658s) is within the limit (172800.0s)
[2025-10-09 23:06:00] 2025-10-10 03:05:16,684 | INFO     | monitor loop #304: job 0:6837350467 is in state 'finished'
[2025-10-09 23:06:00] 2025-10-10 03:05:16,684 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 23:06:00] 2025-10-10 03:05:17,106 | INFO     | time since job start (4660s) is within the limit (172800.0s)
[2025-10-09 23:06:00] 2025-10-10 03:05:19,115 | INFO     | time since job start (4662s) is within the limit (172800.0s)
[2025-10-09 23:06:00] 2025-10-10 03:05:19,189 | INFO     | monitor loop #305: job 0:6837350467 is in state 'finished'
[2025-10-09 23:06:00] 2025-10-10 03:05:19,189 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 23:06:00] 2025-10-10 03:05:21,122 | INFO     | time since job start (4664s) is within the limit (172800.0s)
[2025-10-09 23:06:00] 2025-10-10 03:05:21,694 | INFO     | monitor loop #306: job 0:6837350467 is in state 'finished'
[2025-10-09 23:06:00] 2025-10-10 03:05:21,694 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 23:06:00] 2025-10-10 03:05:24,199 | INFO     | monitor loop #307: job 0:6837350467 is in state 'finished'
[2025-10-09 23:06:00] 2025-10-10 03:05:24,199 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 23:06:00] 2025-10-10 03:05:24,515 | INFO     | PID=3722057 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 23:06:00] 2025-10-10 03:05:24,515 | INFO     | .. there are 64 such processes running
[2025-10-09 23:06:00] 2025-10-10 03:05:25,520 | INFO     | time since job start (4668s) is within the limit (172800.0s)
[2025-10-09 23:06:00] 2025-10-10 03:05:26,727 | INFO     | monitor loop #308: job 0:6837350467 is in state 'finished'
[2025-10-09 23:06:00] 2025-10-10 03:05:26,727 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 23:06:00] 2025-10-10 03:05:27,117 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-09 23:06:00] 2025-10-10 03:05:27,122 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9898281249943
[2025-10-09 23:06:00] 2025-10-10 03:05:27,134 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6837350467/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 23:06:00] 2025-10-10 03:05:27,134 | INFO     | extracted standard info from prmon json
[2025-10-09 23:06:00] 2025-10-10 03:05:27,134 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 23:06:00] 2025-10-10 03:05:27,134 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 23:06:00] 2025-10-10 03:05:27,135 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 23:06:00] 2025-10-10 03:05:27,135 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 23:06:00] 2025-10-10 03:05:27,136 | INFO     | fitting pss+swap vs Time
[2025-10-09 23:06:00] 2025-10-10 03:05:27,136 | INFO     | sum of square deviations: 93243869.94029854
[2025-10-09 23:06:00] 2025-10-10 03:05:27,136 | INFO     | sum of deviations: 3093982053.9104486
[2025-10-09 23:06:00] 2025-10-10 03:05:27,136 | INFO     | mean x: 1760063331.0298507
[2025-10-09 23:06:00] 2025-10-10 03:05:27,136 | INFO     | mean y: 2200561.0447761193
[2025-10-09 23:06:00] 2025-10-10 03:05:27,136 | INFO     | -- intersect: -58399540630.508865
[2025-10-09 23:06:00] 2025-10-10 03:05:27,136 | INFO     | intersect: -58399540630.508865
[2025-10-09 23:06:00] 2025-10-10 03:05:27,136 | INFO     | chi2: 0.20149939249273752
[2025-10-09 23:06:00] 2025-10-10 03:05:27,136 | INFO     | -- intersect: -58399540630.508865
[2025-10-09 23:06:00] 2025-10-10 03:05:27,136 | INFO     | current memory leak: 33.18 B/s (using 67 data points, chi2=0.20)
[2025-10-09 23:06:00] 2025-10-10 03:05:27,136 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2025-10-09 23:06:00] 2025-10-10 03:05:27,137 | INFO     | ..............................
[2025-10-09 23:06:00] 2025-10-10 03:05:27,137 | INFO     | . Timing measurements:
[2025-10-09 23:06:00] 2025-10-10 03:05:27,137 | INFO     | . get job = 0 s
[2025-10-09 23:06:00] 2025-10-10 03:05:27,137 | INFO     | . initial setup = 6 s
[2025-10-09 23:06:00] 2025-10-10 03:05:27,137 | INFO     | . payload setup = 49 s
[2025-10-09 23:06:00] 2025-10-10 03:05:27,137 | INFO     | . stage-in = 0 s
[2025-10-09 23:06:00] 2025-10-10 03:05:27,137 | INFO     | . payload execution = 4514 s
[2025-10-09 23:06:00] 2025-10-10 03:05:27,137 | INFO     | . stage-out = 1 s
[2025-10-09 23:06:00] 2025-10-10 03:05:27,137 | INFO     | . log creation = 0 s
[2025-10-09 23:06:00] 2025-10-10 03:05:27,137 | INFO     | ..............................
[2025-10-09 23:06:00] 2025-10-10 03:05:27,190 | INFO     | 
[2025-10-09 23:06:00] 2025-10-10 03:05:27,190 | INFO     | job summary report
[2025-10-09 23:06:00] 2025-10-10 03:05:27,190 | INFO     | --------------------------------------------------
[2025-10-09 23:06:00] 2025-10-10 03:05:27,190 | INFO     | PanDA job id: 6837350467
[2025-10-09 23:06:00] 2025-10-10 03:05:27,190 | INFO     | task id: 46676269
[2025-10-09 23:06:00] 2025-10-10 03:05:27,190 | INFO     | errors: (none)
[2025-10-09 23:06:00] 2025-10-10 03:05:27,190 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 23:06:00] 2025-10-10 03:05:27,190 | INFO     | pilot state: finished 
[2025-10-09 23:06:00] 2025-10-10 03:05:27,190 | INFO     | transexitcode: 0
[2025-10-09 23:06:00] 2025-10-10 03:05:27,190 | INFO     | exeerrorcode: 0
[2025-10-09 23:06:00] 2025-10-10 03:05:27,190 | INFO     | exeerrordiag: 
[2025-10-09 23:06:00] 2025-10-10 03:05:27,190 | INFO     | exitcode: 0
[2025-10-09 23:06:00] 2025-10-10 03:05:27,190 | INFO     | exitmsg: OK
[2025-10-09 23:06:00] 2025-10-10 03:05:27,190 | INFO     | cpuconsumptiontime: 22197 s
[2025-10-09 23:06:00] 2025-10-10 03:05:27,190 | INFO     | nevents: 400
[2025-10-09 23:06:00] 2025-10-10 03:05:27,190 | INFO     | neventsw: 0
[2025-10-09 23:06:00] 2025-10-10 03:05:27,191 | INFO     | pid: 3747884
[2025-10-09 23:06:00] 2025-10-10 03:05:27,191 | INFO     | pgrp: 3747884
[2025-10-09 23:06:00] 2025-10-10 03:05:27,191 | INFO     | corecount: 9
[2025-10-09 23:06:00] 2025-10-10 03:05:27,191 | INFO     | event service: False
[2025-10-09 23:06:00] 2025-10-10 03:05:27,191 | INFO     | sizes: {0: 2348682, 1: 2348881, 12: 2348881, 23: 2348909, 33: 2349255, 4567: 2375459, 4569: 2384457, 4571: 2384513, 4603: 2384707}
[2025-10-09 23:06:00] 2025-10-10 03:05:27,191 | INFO     | --------------------------------------------------
[2025-10-09 23:06:00] 2025-10-10 03:05:27,191 | INFO     | 
[2025-10-09 23:06:00] 2025-10-10 03:05:27,191 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-09 23:06:00] 2025-10-10 03:05:27,359 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 23:06:00] 2025-10-10 03:05:27,359 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 23:06:00] 2025-10-10 03:05:27,359 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 23:06:00] 2025-10-10 03:05:27,359 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 23:06:00] 2025-10-10 03:05:27,359 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 23:06:00] 2025-10-10 03:05:27,359 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 23:06:00] 2025-10-10 03:05:27,359 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 23:06:00] 2025-10-10 03:05:27,359 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 23:06:00] 2025-10-10 03:05:27,360 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 23:06:00] 2025-10-10 03:05:27,360 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 23:06:00] 2025-10-10 03:05:27,360 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 23:06:00] 2025-10-10 03:05:27,360 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 23:06:00] 2025-10-10 03:05:27,360 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 23:06:00] 2025-10-10 03:05:27,360 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 23:06:00] 2025-10-10 03:05:27,360 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 23:06:00] 2025-10-10 03:05:27,360 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 23:06:00] 2025-10-10 03:05:27,360 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 23:06:00] 2025-10-10 03:05:27,360 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 23:06:00] 2025-10-10 03:05:27,360 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 23:06:00] 2025-10-10 03:05:27,360 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 23:06:00] 2025-10-10 03:05:27,360 | INFO     | job 6837350467 has completed (purged errors)
[2025-10-09 23:06:00] 2025-10-10 03:05:27,360 | INFO     | overall cleanup function is called
[2025-10-09 23:06:00] 2025-10-10 03:05:28,373 | INFO     | --- collectZombieJob: --- 10, [3747884]
[2025-10-09 23:06:00] 2025-10-10 03:05:28,373 | INFO     | zombie collector waiting for pid 3747884
[2025-10-09 23:06:00] 2025-10-10 03:05:28,373 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 23:06:00] 2025-10-10 03:05:28,373 | INFO     | collected zombie processes
[2025-10-09 23:06:00] 2025-10-10 03:05:28,373 | INFO     | will attempt to kill all subprocesses of pid=3747884
[2025-10-09 23:06:00] 2025-10-10 03:05:29,595 | INFO     | process IDs to be killed: [3747884] (in reverse order)
[2025-10-09 23:06:00] 2025-10-10 03:05:30,190 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 23:06:00] 2025-10-10 03:05:30,190 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 23:06:00] 2025-10-10 03:05:30,264 | INFO     | did not find any defunct processes belonging to 3747884
[2025-10-09 23:06:00] 2025-10-10 03:05:30,336 | INFO     | did not find any defunct processes belonging to 3747884
[2025-10-09 23:06:00] 2025-10-10 03:05:30,336 | INFO     | ready for new job
[2025-10-09 23:06:00] 2025-10-10 03:05:30,336 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 23:06:00] 2025-10-10 03:05:30,337 | INFO     | ***************************************
[2025-10-09 23:06:00] 2025-10-10 03:05:30,337 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-09 23:06:00] 2025-10-10 03:05:30,337 | INFO     | ***************************************
[2025-10-09 23:06:00] 2025-10-10 03:05:30,338 | INFO     | 
[2025-10-09 23:06:00] 2025-10-10 03:05:30,360 | INFO     | architecture information:
[2025-10-09 23:06:00] 2025-10-10 03:05:30,364 | INFO     | executing command: cat /etc/os-release
[2025-10-09 23:06:00] 2025-10-10 03:05:30,398 | INFO     | cat /etc/os-release:
[2025-10-09 23:06:00] NAME="CentOS Linux"
[2025-10-09 23:06:00] VERSION="7 (Core)"
[2025-10-09 23:06:00] ID="centos"
[2025-10-09 23:06:00] ID_LIKE="rhel fedora"
[2025-10-09 23:06:00] VERSION_ID="7"
[2025-10-09 23:06:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 23:06:00] ANSI_COLOR="0;31"
[2025-10-09 23:06:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 23:06:00] HOME_URL="https://www.centos.org/"
[2025-10-09 23:06:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 23:06:00] 
[2025-10-09 23:06:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 23:06:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 23:06:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 23:06:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 23:06:00] 
[2025-10-09 23:06:00] 2025-10-10 03:05:30,398 | INFO     | ***************************************
[2025-10-09 23:06:00] 2025-10-10 03:05:30,901 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-09 23:06:00] 2025-10-10 03:05:30,993 | INFO     | sufficient remaining disk space (167985020928 B)
[2025-10-09 23:06:00] 2025-10-10 03:05:30,993 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 23:06:00] 2025-10-10 03:05:30,994 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 23:06:00] 2025-10-10 03:05:30,994 | INFO     | update_server=False
[2025-10-09 23:06:00] 2025-10-10 03:05:30,994 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 23:06:00] 2025-10-10 03:05:30,994 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 23:06:00] 2025-10-10 03:05:30,994 | INFO     | aborting loop
[2025-10-09 23:06:00] 2025-10-10 03:05:31,051 | INFO     | all job control threads have been joined
[2025-10-09 23:06:00] 2025-10-10 03:05:31,127 | INFO     | all data control threads have been joined
[2025-10-09 23:06:00] 2025-10-10 03:05:31,575 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 23:06:00] 2025-10-10 03:05:32,006 | INFO     | [job] retrieve thread has finished
[2025-10-09 23:06:00] 2025-10-10 03:05:32,006 | INFO     | [job] job monitor thread has finished
[2025-10-09 23:06:00] 2025-10-10 03:05:32,057 | INFO     | [job] control thread has finished
[2025-10-09 23:06:00] 2025-10-10 03:05:32,063 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 23:06:00] 2025-10-10 03:05:32,084 | INFO     | [payload] validate_post thread has finished
[2025-10-09 23:06:00] 2025-10-10 03:05:32,136 | INFO     | [data] control thread has finished
[2025-10-09 23:06:00] 2025-10-10 03:05:32,207 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 23:06:00] 2025-10-10 03:05:32,210 | INFO     | all payload control threads have been joined
[2025-10-09 23:06:00] 2025-10-10 03:05:32,327 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 23:06:00] 2025-10-10 03:05:32,404 | INFO     | [job] validate thread has finished
[2025-10-09 23:06:00] 2025-10-10 03:05:32,466 | INFO     | [data] copytool_in thread has finished
[2025-10-09 23:06:00] 2025-10-10 03:05:32,535 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 23:06:00] 2025-10-10 03:05:32,825 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 23:06:00] 2025-10-10 03:05:33,121 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 23:06:00] 2025-10-10 03:05:33,212 | INFO     | [job] queue monitor thread has finished
[2025-10-09 23:06:00] 2025-10-10 03:05:33,216 | INFO     | [payload] control thread has finished
[2025-10-09 23:06:00] 2025-10-10 03:05:33,581 | INFO     | [data] copytool_out thread has finished
[2025-10-09 23:06:00] 2025-10-10 03:05:33,594 | INFO     | [payload] failed_post thread has finished
[2025-10-09 23:06:00] 2025-10-10 03:05:36,834 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 23:06:00] 2025-10-10 03:05:45,038 | INFO     | [monitor] cgroup control has ended
[2025-10-09 23:06:00] 2025-10-10 03:05:45,679 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139983758178112)>', '<ExcThread(monitor, started 139983033718528)>']
[2025-10-09 23:06:00] 2025-10-10 03:05:50,705 | INFO     | all workflow threads have been joined
[2025-10-09 23:06:00] 2025-10-10 03:05:50,705 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 23:06:00] 2025-10-10 03:05:50,705 | INFO     | traces error code: 0
[2025-10-09 23:06:00] 2025-10-10 03:05:50,705 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 23:06:00] 2025-10-10 03:05:59,656 | INFO     | PID=3722057 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 23:06:00] 2025-10-10 03:05:59,658 | INFO     | .. there are 64 such processes running
[2025-10-09 23:06:00] 2025-10-10 03:05:59,658 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 23:06:00] 2025-10-10 03:05:59,658 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 23:06:00] 2025-10-10 03:05:59,658 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 23:06:00] 2025-10-10 03:05:59,658 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 23:06:00] 2025-10-10 03:05:59,658 | INFO     | [monitor] control thread has ended
[2025-10-09 23:06:00] 2025-10-10 03:05:59,919 [wrapper] ==== pilot stdout END ====
[2025-10-09 23:06:00] 2025-10-10 03:05:59,935 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 23:06:00] 2025-10-10 03:05:59,947 [wrapper] pilotpid: 3722057
[2025-10-09 23:06:00] 2025-10-10 03:05:59,957 [wrapper] Pilot exit status: 0
[2025-10-09 23:06:00] 2025-10-10 03:06:00,033 [wrapper] pandaids: 6837350467
[2025-10-09 23:06:00] 2025-10-10 03:06:00,296 [wrapper] cleanup supervisor_pilot  359704 3722058
[2025-10-09 23:06:00] 2025-10-10 03:06:00,305 [wrapper] Test setup, not cleaning
[2025-10-09 23:06:00] 2025-10-10 03:06:00,315 [wrapper] apfmon messages muted
[2025-10-09 23:06:00] 2025-10-10 03:06:00,339 [wrapper] ==== wrapper stdout END ====
[2025-10-09 23:06:00] 2025-10-10 03:06:00,354 [wrapper] ==== wrapper stderr END ====
[2025-10-09 23:06:00]  *** Error codes and diagnostics ***
[2025-10-09 23:06:00]     "exeErrorCode": 0,
[2025-10-09 23:06:00]     "exeErrorDiag": "",
[2025-10-09 23:06:00]     "pilotErrorCode": 0,
[2025-10-09 23:06:00]     "pilotErrorDiag": "",
[2025-10-09 23:06:00]  *** Listing of results directory ***
[2025-10-09 23:06:00] total 413988
[2025-10-09 23:06:00] -rw-r--r--. 1 boincer umatlas    563267 Oct  7 03:02 pilot3.tar.gz
[2025-10-09 23:06:00] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 11:50 queuedata.json
[2025-10-09 23:06:00] -rwx------. 1 boincer umatlas     36292 Oct  9 11:51 runpilot2-wrapper.sh
[2025-10-09 23:06:00] -rw-r--r--. 1 boincer umatlas       100 Oct  9 21:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 23:06:00] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  9 21:46 run_atlas
[2025-10-09 23:06:00] -rw-r--r--. 1 boincer umatlas       105 Oct  9 21:46 job.xml
[2025-10-09 23:06:00] -rw-r--r--. 2 boincer umatlas 223262905 Oct  9 21:46 EVNT.46676267._000663.pool.root.1
[2025-10-09 23:06:00] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 21:46 start_atlas.sh
[2025-10-09 23:06:00] drwxrwx--x. 2 boincer umatlas      4096 Oct  9 21:46 shared
[2025-10-09 23:06:00] -rw-r--r--. 2 boincer umatlas    576706 Oct  9 21:46 input.tar.gz
[2025-10-09 23:06:00] -rw-r--r--. 1 boincer umatlas         0 Oct  9 21:46 boinc_lockfile
[2025-10-09 23:06:00] -rw-r--r--. 1 boincer umatlas      2548 Oct  9 21:46 pandaJob.out
[2025-10-09 23:06:00] -rw-------. 1 boincer umatlas    975454 Oct  9 21:47 agis_schedconf.cvmfs.json
[2025-10-09 23:06:00] -rw-------. 1 boincer umatlas   1560580 Oct  9 21:47 agis_ddmendpoints.agis.ALL.json
[2025-10-09 23:06:00] drwx------. 4 boincer umatlas      4096 Oct  9 21:47 pilot3
[2025-10-09 23:06:00] -rw-r--r--. 1 boincer umatlas      7161 Oct  9 23:00 init_data.xml
[2025-10-09 23:06:00] -rw-------. 1 boincer umatlas 194885635 Oct  9 23:04 HITS.46676269._021756.pool.root.1
[2025-10-09 23:06:00] -rw-r--r--. 1 boincer umatlas       529 Oct  9 23:04 boinc_task_state.xml
[2025-10-09 23:06:00] -rw-------. 1 boincer umatlas      1033 Oct  9 23:04 memory_monitor_summary.json
[2025-10-09 23:06:00] -rw-------. 1 boincer umatlas    323347 Oct  9 23:04 log.46676269._021756.job.log.tgz.1
[2025-10-09 23:06:00] -rw-------. 1 boincer umatlas        95 Oct  9 23:05 pilot_heartbeat.json
[2025-10-09 23:06:00] -rw-------. 1 boincer umatlas      7777 Oct  9 23:05 heartbeat.json
[2025-10-09 23:06:00] -rw-r--r--. 1 boincer umatlas      8192 Oct  9 23:05 boinc_mmap_file
[2025-10-09 23:06:00] -rw-r--r--. 1 boincer umatlas        27 Oct  9 23:05 wrapper_checkpoint.txt
[2025-10-09 23:06:00] -rw-------. 1 boincer umatlas       823 Oct  9 23:05 pilotlog.txt
[2025-10-09 23:06:00] -rw-------. 1 boincer umatlas    614032 Oct  9 23:06 log.46676269._021756.job.log.1
[2025-10-09 23:06:00] -rw-------. 1 boincer umatlas       357 Oct  9 23:06 output.list
[2025-10-09 23:06:00] -rw-r--r--. 1 boincer umatlas       620 Oct  9 23:06 runtime_log
[2025-10-09 23:06:00] -rw-------. 1 boincer umatlas    952320 Oct  9 23:06 result.tar.gz
[2025-10-09 23:06:00] -rw-------. 1 boincer umatlas       651 Oct  9 23:06 UDpKDmQ67Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYeaNDmPja7Om.diag
[2025-10-09 23:06:00] -rw-r--r--. 1 boincer umatlas      8698 Oct  9 23:06 runtime_log.err
[2025-10-09 23:06:00] -rw-r--r--. 1 boincer umatlas     22357 Oct  9 23:06 stderr.txt
[2025-10-09 23:06:00] HITS file was successfully produced:
[2025-10-09 23:06:00] -rw-------. 1 boincer umatlas 194885635 Oct  9 23:04 shared/HITS.pool.root.1
[2025-10-09 23:06:00]  *** Contents of shared directory: ***
[2025-10-09 23:06:00] total 409868
[2025-10-09 23:06:00] -rw-r--r--. 2 boincer umatlas 223262905 Oct  9 21:46 ATLAS.root_0
[2025-10-09 23:06:00] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 21:46 start_atlas.sh
[2025-10-09 23:06:00] -rw-r--r--. 2 boincer umatlas    576706 Oct  9 21:46 input.tar.gz
[2025-10-09 23:06:00] -rw-------. 1 boincer umatlas 194885635 Oct  9 23:04 HITS.pool.root.1
[2025-10-09 23:06:00] -rw-------. 1 boincer umatlas    952320 Oct  9 23:06 result.tar.gz
23:06:02 (3708805): run_atlas exited; CPU time 22386.748272
23:06:02 (3708805): called boinc_finish(0)

</stderr_txt>
]]>

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