Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-10 12:20:54 (355860): vboxwrapper version 26210
2025-10-10 12:20:54 (355860): BOINC client version: 7.16.20
2025-10-10 12:20:55 (355860): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2025-10-10 12:20:55 (355860): Successfully copied 'init_data.xml' to the shared directory.
2025-10-10 12:20:55 (355860): Create VM. (boinc_c0ee1f2a312f9903, slot#3)
2025-10-10 12:20:56 (355860): Setting Memory Size for VM. (4800MB)
2025-10-10 12:20:57 (355860): Setting CPU Count for VM. (8)
2025-10-10 12:20:57 (355860): Setting Chipset Options for VM.
2025-10-10 12:20:57 (355860): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-10 12:20:57 (355860): Setting Boot Options for VM.
2025-10-10 12:20:58 (355860): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-10 12:20:58 (355860): Enabling VM Network Access.
2025-10-10 12:20:58 (355860): Disabling USB Support for VM.
2025-10-10 12:20:59 (355860): Disabling COM Port Support for VM.
2025-10-10 12:20:59 (355860): Disabling LPT Port Support for VM.
2025-10-10 12:20:59 (355860): Disabling Audio Support for VM.
2025-10-10 12:21:00 (355860): Disabling Clipboard Support for VM.
2025-10-10 12:21:00 (355860): Disabling Drag and Drop Support for VM.
2025-10-10 12:21:00 (355860): Adding storage controller(s) to VM.
2025-10-10 12:21:00 (355860): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-10 12:21:02 (355860): Adding VirtualBox Guest Additions to VM.
2025-10-10 12:21:03 (355860): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-10 12:21:03 (355860): forwarding host port 53310 to guest port 80
2025-10-10 12:21:03 (355860): Enabling remote desktop for VM.
2025-10-10 12:21:03 (355860): Required extension pack not installed, remote desktop not enabled.
2025-10-10 12:21:03 (355860): Enabling shared directory for VM.
2025-10-10 12:21:04 (355860): Starting VM using VBoxManage interface. (boinc_c0ee1f2a312f9903, slot#3)
2025-10-10 12:21:16 (355860): Successfully started VM. (PID = '357440')
2025-10-10 12:21:16 (355860): Reporting VM Process ID to BOINC.
2025-10-10 12:21:16 (355860): Guest Log: BIOS: VirtualBox 6.0.14
2025-10-10 12:21:16 (355860): Guest Log: CPUID EDX: 0x178bfbff
2025-10-10 12:21:16 (355860): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-10 12:21:16 (355860): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-10 12:21:16 (355860): Detected: Web Application Enabled (http://localhost:53310)
2025-10-10 12:21:16 (355860): Preference change detected
2025-10-10 12:21:16 (355860): Setting CPU throttle for VM. (100%)
2025-10-10 12:21:16 (355860): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-10 12:21:18 (355860): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-10 12:21:18 (355860): Guest Log: BIOS: Booting from Hard Disk...
2025-10-10 12:21:23 (355860): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-10 12:21:23 (355860): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-10 12:21:23 (355860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-10 12:21:41 (355860): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-10 12:21:41 (355860): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-10 12:22:25 (355860): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-10 12:22:25 (355860): Guest Log: 00:00:00.000263 main     Log opened 2025-10-10T12:22:23.676193000Z
2025-10-10 12:22:25 (355860): Guest Log: 00:00:00.000413 main     OS Product: Linux
2025-10-10 12:22:25 (355860): Guest Log: 00:00:00.000460 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-10 12:22:25 (355860): Guest Log: 00:00:00.000502 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-10 12:22:25 (355860): Guest Log: 00:00:00.000545 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-10 12:22:25 (355860): Guest Log: 00:00:00.000547 main     Process ID: 1405
2025-10-10 12:22:25 (355860): Guest Log: 00:00:00.000548 main     Package type: LINUX_64BITS_GENERIC
2025-10-10 12:22:25 (355860): Guest Log: 00:00:00.002202 main     5.2.32 r132073 started. Verbose level = 0
2025-10-10 12:22:26 (355860): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-10 12:22:26 (355860): Guest Log: [INFO] Mounting shared directory
2025-10-10 12:22:26 (355860): Guest Log: [INFO] Checking for init_data.xml
2025-10-10 12:22:35 (355860): Guest Log: 00:00:10.011421 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 465 445 000ns (GuestNow=1 760 116 955 148 365 000 ns GuestLast=1 760 098 943 682 920 000 ns fSetTimeLastLoop=true )
2025-10-10 12:22:47 (355860): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-10 12:22:47 (355860): Guest Log: [INFO] Detected branch: prod
2025-10-10 12:22:47 (355860): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-10 12:22:47 (355860): Guest Log: Copying input files
2025-10-10 12:22:52 (355860): Guest Log: Copied input files into RunAtlas.
2025-10-10 12:22:52 (355860): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-10 12:22:52 (355860): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-10 12:22:52 (355860): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-10 12:22:52 (355860): Guest Log: Further information can be found at the LHC@home message board.
2025-10-10 12:23:05 (355860): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-10 12:23:06 (355860): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-10 12:23:06 (355860): Guest Log: 2.6.3.0 1688 0 32164 151556 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-10 12:23:15 (355860): Guest Log: copied the webapp to /var/www
2025-10-10 12:23:15 (355860): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-10 12:23:15 (355860): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-10 12:23:15 (355860): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-10 12:23:15 (355860): Guest Log:  *** Starting ATLAS job. (PandaID=6837359750 taskID=46676269) ***
2025-10-10 13:30:05 (355860): Preference change detected
2025-10-10 13:30:05 (355860): Setting CPU throttle for VM. (100%)
2025-10-10 13:30:06 (355860): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-10 14:01:26 (355860): Status Report: Elapsed Time: '6000.000000'
2025-10-10 14:01:26 (355860): Status Report: CPU Time: '21033.468750'
2025-10-10 15:41:38 (355860): Status Report: Elapsed Time: '12000.366516'
2025-10-10 15:41:38 (355860): Status Report: CPU Time: '46984.937500'
2025-10-10 17:21:51 (355860): Status Report: Elapsed Time: '18000.366516'
2025-10-10 17:21:51 (355860): Status Report: CPU Time: '72974.671875'
2025-10-10 18:33:24 (355860): Guest Log:  *** Job finished ***
2025-10-10 18:33:24 (355860): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-10 18:33:25 (355860): Guest Log: 2025-10-10 23:32:58,800 | INFO     | [job] queue monitor thread has finished
2025-10-10 18:33:25 (355860): Guest Log: 2025-10-10 23:32:59,022 | INFO     | [data] queue_monitor thread has finished
2025-10-10 18:33:25 (355860): Guest Log: 2025-10-10 23:33:13,855 | INFO     | [monitor] cgroup control has ended
2025-10-10 18:33:25 (355860): Guest Log: 2025-10-10 23:33:15,694 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140502293198656)>', '<ExcThread(monitor, started 140501701342976)>']
2025-10-10 18:33:25 (355860): Guest Log: 2025-10-10 23:33:15,951 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-10 18:33:25 (355860): Guest Log: 2025-10-10 23:33:15,952 | INFO     | [monitor] control thread has ended
2025-10-10 18:33:25 (355860): Guest Log: 2025-10-10 23:33:20,704 | INFO     | all workflow threads have been joined
2025-10-10 18:33:25 (355860): Guest Log: 2025-10-10 23:33:20,705 | INFO     | end of generic workflow (traces error code: 0)
2025-10-10 18:33:25 (355860): Guest Log: 2025-10-10 23:33:20,705 | INFO     | traces error code: 0
2025-10-10 18:33:25 (355860): Guest Log: 2025-10-10 23:33:20,705 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-10 18:33:25 (355860): Guest Log: 2025-10-10 23:33:21,683 [wrapper] ==== pilot stdout END ====
2025-10-10 18:33:25 (355860): Guest Log: 2025-10-10 23:33:21,692 [wrapper] ==== wrapper stdout RESUME ====
2025-10-10 18:33:25 (355860): Guest Log: 2025-10-10 23:33:21,702 [wrapper] pilotpid: 6152
2025-10-10 18:33:25 (355860): Guest Log: 2025-10-10 23:33:21,711 [wrapper] Pilot exit status: 0
2025-10-10 18:33:25 (355860): Guest Log: 2025-10-10 23:33:21,858 [wrapper] pandaids: 6837359750
2025-10-10 18:33:25 (355860): Guest Log: 2025-10-10 23:33:21,923 [wrapper] cleanup supervisor_pilot 25278 6153
2025-10-10 18:33:25 (355860): Guest Log: 2025-10-10 23:33:21,933 [wrapper] Test setup, not cleaning
2025-10-10 18:33:25 (355860): Guest Log: 2025-10-10 23:33:21,942 [wrapper] apfmon messages muted
2025-10-10 18:33:25 (355860): Guest Log: 2025-10-10 23:33:21,949 [wrapper] ==== wrapper stdout END ====
2025-10-10 18:33:25 (355860): Guest Log: 2025-10-10 23:33:21,957 [wrapper] ==== wrapper stderr END ====
2025-10-10 18:33:25 (355860): Guest Log:  *** Error codes and diagnostics ***
2025-10-10 18:33:25 (355860): Guest Log:     "exeErrorCode": 0,
2025-10-10 18:33:25 (355860): Guest Log:     "exeErrorDiag": "",
2025-10-10 18:33:25 (355860): Guest Log:     "pilotErrorCode": 0,
2025-10-10 18:33:25 (355860): Guest Log:     "pilotErrorDiag": "",
2025-10-10 18:33:25 (355860): Guest Log:  *** Listing of results directory ***
2025-10-10 18:33:25 (355860): Guest Log: total 202028
2025-10-10 18:33:25 (355860): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct  9 19:24 pilot3.tar.gz
2025-10-10 18:33:25 (355860): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  9 19:48 runpilot2-wrapper.sh
2025-10-10 18:33:25 (355860): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  9 19:48 queuedata.json
2025-10-10 18:33:25 (355860): Guest Log: -rwxr-xr-x. 1 atlas atlas      8642 Oct 10 17:22 init_data.xml
2025-10-10 18:33:25 (355860): Guest Log: -rwxr-xr-x. 1 atlas atlas    569679 Oct 10 17:22 input.tar.gz
2025-10-10 18:33:25 (355860): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 10 17:22 start_atlas.sh
2025-10-10 18:33:25 (355860): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 10 17:22 EVNT.46676267._001045.pool.root.1 -> /data/./ATLAS.root_0
2025-10-10 18:33:25 (355860): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Oct 10 17:23 pandaJob.out
2025-10-10 18:33:25 (355860): Guest Log: -rw-------. 1 atlas atlas    975525 Oct 10 17:25 agis_schedconf.cvmfs.json
2025-10-10 18:33:25 (355860): Guest Log: drwx------. 5 atlas atlas      4096 Oct 10 17:25 pilot3
2025-10-10 18:33:25 (355860): Guest Log: -rw-------. 1 atlas atlas 196414440 Oct 10 23:31 HITS.46676269._025278.pool.root.1
2025-10-10 18:33:25 (355860): Guest Log: -rw-------. 1 atlas atlas      1033 Oct 10 23:32 memory_monitor_summary.json
2025-10-10 18:33:25 (355860): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 10 23:32 agis_ddmendpoints.agis.ALL.json
2025-10-10 18:33:25 (355860): Guest Log: -rw-------. 1 atlas atlas    581701 Oct 10 23:32 log.46676269._025278.job.log.tgz.1
2025-10-10 18:33:25 (355860): Guest Log: -rw-------. 1 atlas atlas        95 Oct 10 23:32 pilot_heartbeat.json
2025-10-10 18:33:25 (355860): Guest Log: -rw-------. 1 atlas atlas      7834 Oct 10 23:32 heartbeat.json
2025-10-10 18:33:25 (355860): Guest Log: -rw-------. 1 atlas atlas      4612 Oct 10 23:33 pilotlog.txt
2025-10-10 18:33:25 (355860): Guest Log: -rw-------. 1 atlas atlas   2728018 Oct 10 23:33 log.46676269._025278.job.log.1
2025-10-10 18:33:25 (355860): Guest Log: -rw-------. 1 atlas atlas       357 Oct 10 23:33 output.list
2025-10-10 18:33:25 (355860): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 10 23:33 runtime_log
2025-10-10 18:33:25 (355860): Guest Log: -rw-------. 1 atlas atlas   3328000 Oct 10 23:33 result.tar.gz
2025-10-10 18:33:25 (355860): Guest Log: -rw-r--r--. 1 atlas atlas      8676 Oct 10 23:33 runtime_log.err
2025-10-10 18:33:25 (355860): Guest Log: -rw-------. 1 atlas atlas       673 Oct 10 23:33 DG8MDmpnBR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmpcOMDm3Olz9n.diag
2025-10-10 18:33:25 (355860): Guest Log: Looking for outputfile HITS.46676269._025278.pool.root.1
2025-10-10 18:33:25 (355860): Guest Log: HITS file was successfully produced
2025-10-10 18:33:25 (355860): Guest Log: -rw-------. 1 atlas atlas 196414440 Oct 10 23:31 /home/atlas/RunAtlas/HITS.46676269._025278.pool.root.1
2025-10-10 18:33:30 (355860): Guest Log: Successfully finished the ATLAS job!
2025-10-10 18:33:30 (355860): Guest Log: Copying the results back to the shared directory!
2025-10-10 18:33:30 (355860): Guest Log:  *** Contents of shared directory: ***
2025-10-10 18:33:31 (355860): Guest Log: total 412692
2025-10-10 18:33:31 (355860): Guest Log: -rwxrwxrwx. 1 root root 222248090 Oct 10 17:20 ATLAS.root_0
2025-10-10 18:33:31 (355860): Guest Log: -rwxrwxrwx. 1 root root 196414440 Oct 10 23:33 HITS.pool.root.1
2025-10-10 18:33:31 (355860): Guest Log: -rwxrwxrwx. 1 root root      8642 Oct 10 17:20 init_data.xml
2025-10-10 18:33:31 (355860): Guest Log: -rwxrwxrwx. 1 root root    569679 Oct 10 01:22 input.tar.gz
2025-10-10 18:33:31 (355860): Guest Log: -rwxrwxrwx. 1 root root   3328000 Oct 10 23:33 result.tar.gz
2025-10-10 18:33:31 (355860): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 10 01:22 start_atlas.sh
2025-10-10 18:33:31 (355860): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-10 18:33:31 (355860): VM Completion File Detected.
2025-10-10 18:33:31 (355860): Powering off VM.
2025-10-10 18:33:39 (355860): Successfully stopped VM.
2025-10-10 18:33:39 (355860): Deregistering VM. (boinc_c0ee1f2a312f9903, slot#3)
2025-10-10 18:33:39 (355860): Removing network bandwidth throttle group from VM.
2025-10-10 18:33:40 (355860): Removing VM from VirtualBox.
2025-10-10 18:33:46 (355860): called boinc_finish(0)

</stderr_txt>
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