Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:06:25 (54297): wrapper (7.7.26015): starting
11:06:25 (54297): wrapper: running run_atlas (--nthreads 4)
[2025-10-10 11:06:25] Arguments: --nthreads 4
[2025-10-10 11:06:25] Threads: 4
[2025-10-10 11:06:25] Checking for CVMFS
[2025-10-10 11:06:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 11:06:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 11:06:25] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 11:06:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 11:06:25] 2.9.2.0 2990 146 56080 151539 1 57 28083370 36864001 0 130560 0 130983 99.998 2606 795 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-10 11:06:25] CVMFS is ok
[2025-10-10 11:06:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 11:06:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 11:06:25] Further information can be found at the LHC@home message board.
[2025-10-10 11:06:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 11:06:25] Checking for apptainer binary...
[2025-10-10 11:06:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 11:06:25] Running /usr/bin/apptainer --version
[2025-10-10 11:06:25] apptainer version 1.4.1-1.1
[2025-10-10 11:06:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 11:06:25] belleA267b
[2025-10-10 11:06:25] apptainer works
[2025-10-10 11:06:25] Set ATHENA_PROC_NUMBER=4
[2025-10-10 11:06:25] Set ATHENA_CORE_NUMBER=4
[2025-10-10 11:06:25] Starting ATLAS job with PandaID=6837353025
[2025-10-10 11:06:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 12:17:44]  *** The last 200 lines of the pilot log: ***
[2025-10-10 12:17:44] 2025-10-10 10:17:00,035 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6837353025/log.46676269._022521.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0225
[2025-10-10 12:17:44] 2025-10-10 10:17:00,053 | INFO     | adding to output.list: log.46676269._022521.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/40/52/log.46676269._022521.job.log.tg
[2025-10-10 12:17:44] 2025-10-10 10:17:00,053 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 12:17:44] 2025-10-10 10:17:00,053 | INFO     | summary of transferred files:
[2025-10-10 12:17:44] 2025-10-10 10:17:00,053 | INFO     |  -- lfn=log.46676269._022521.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 12:17:44] 2025-10-10 10:17:00,054 | INFO     | stage-out finished correctly
[2025-10-10 12:17:44] 2025-10-10 10:17:00,095 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 12:17:44] 2025-10-10 10:17:00,137 | INFO     | time since job start (4227s) is within the limit (172800.0s)
[2025-10-10 12:17:44] 2025-10-10 10:17:01,528 | INFO     | job 6837353025 has state=finished
[2025-10-10 12:17:44] 2025-10-10 10:17:01,528 | INFO     | preparing for final server update for job 6837353025 in state='finished'
[2025-10-10 12:17:44] 2025-10-10 10:17:01,528 | INFO     | this job has now completed (state=finished)
[2025-10-10 12:17:44] 2025-10-10 10:17:01,528 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 12:17:44] 2025-10-10 10:17:01,528 | INFO     | log transfer has been attempted: DONE
[2025-10-10 12:17:44] 2025-10-10 10:17:01,528 | INFO     | job 6837353025 has finished - writing final server update
[2025-10-10 12:17:44] 2025-10-10 10:17:01,529 | INFO     | total number of processed events: 400 (read)
[2025-10-10 12:17:44] 2025-10-10 10:17:01,529 | INFO     | executing command: lscpu
[2025-10-10 12:17:44] 2025-10-10 10:17:01,549 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 12:17:44] 2025-10-10 10:17:02,143 | INFO     | time since job start (4229s) is within the limit (172800.0s)
[2025-10-10 12:17:44] 2025-10-10 10:17:04,149 | INFO     | time since job start (4231s) is within the limit (172800.0s)
[2025-10-10 12:17:44] 2025-10-10 10:17:05,241 | WARNING  | process 64685 can no longer be monitored (due to stat problems) - aborting
[2025-10-10 12:17:44] 2025-10-10 10:17:05,241 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6837353025/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 12:17:44] 2025-10-10 10:17:05,242 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6837353025/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 12:17:44] 2025-10-10 10:17:05,242 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-10 12:17:44] 2025-10-10 10:17:05,242 | WARNING  | maxPSS not found in memory monitor output
[2025-10-10 12:17:44] 2025-10-10 10:17:05,242 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2602039 B
[2025-10-10 12:17:44] 2025-10-10 10:17:05,243 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16026 B
[2025-10-10 12:17:44] 2025-10-10 10:17:05,243 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-10 12:17:44] 2025-10-10 10:17:05,735 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 12:17:44] 2025-10-10 10:17:05,740 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3588.8367499999995
[2025-10-10 12:17:44] 2025-10-10 10:17:05,743 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6837353025/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 12:17:44] 2025-10-10 10:17:05,743 | INFO     | extracted standard info from prmon json
[2025-10-10 12:17:44] 2025-10-10 10:17:05,743 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 12:17:44] 2025-10-10 10:17:05,743 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 12:17:44] 2025-10-10 10:17:05,744 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 12:17:44] 2025-10-10 10:17:05,744 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 12:17:44] 2025-10-10 10:17:05,744 | INFO     | fitting pss+swap vs Time
[2025-10-10 12:17:44] 2025-10-10 10:17:05,745 | INFO     | sum of square deviations: 73882315.5
[2025-10-10 12:17:44] 2025-10-10 10:17:05,745 | INFO     | sum of deviations: 1414090989.5
[2025-10-10 12:17:44] 2025-10-10 10:17:05,745 | INFO     | mean x: 1760089381.5
[2025-10-10 12:17:44] 2025-10-10 10:17:05,745 | INFO     | mean y: 2397283.435483871
[2025-10-10 12:17:44] 2025-10-10 10:17:05,745 | INFO     | -- intersect: -33685319706.075733
[2025-10-10 12:17:44] 2025-10-10 10:17:05,745 | INFO     | intersect: -33685319706.075733
[2025-10-10 12:17:44] 2025-10-10 10:17:05,745 | INFO     | chi2: 0.003778524642160637
[2025-10-10 12:17:44] 2025-10-10 10:17:05,745 | INFO     | -- intersect: -33685319706.075733
[2025-10-10 12:17:44] 2025-10-10 10:17:05,745 | INFO     | current memory leak: 19.14 B/s (using 62 data points, chi2=0.00)
[2025-10-10 12:17:44] 2025-10-10 10:17:05,745 | INFO     | could have reported an average CPU frequency of 3688 MHz (6 samples)
[2025-10-10 12:17:44] 2025-10-10 10:17:05,745 | INFO     | ..............................
[2025-10-10 12:17:44] 2025-10-10 10:17:05,745 | INFO     | . Timing measurements:
[2025-10-10 12:17:44] 2025-10-10 10:17:05,745 | INFO     | . get job = 0 s
[2025-10-10 12:17:44] 2025-10-10 10:17:05,745 | INFO     | . initial setup = 1 s
[2025-10-10 12:17:44] 2025-10-10 10:17:05,745 | INFO     | . payload setup = 4 s
[2025-10-10 12:17:44] 2025-10-10 10:17:05,745 | INFO     | . stage-in = 0 s
[2025-10-10 12:17:44] 2025-10-10 10:17:05,746 | INFO     | . payload execution = 4204 s
[2025-10-10 12:17:44] 2025-10-10 10:17:05,746 | INFO     | . stage-out = 0 s
[2025-10-10 12:17:44] 2025-10-10 10:17:05,746 | INFO     | . log creation = 0 s
[2025-10-10 12:17:44] 2025-10-10 10:17:05,746 | INFO     | ..............................
[2025-10-10 12:17:44] 2025-10-10 10:17:05,764 | INFO     | sufficient remaining disk space (331757912064 B)
[2025-10-10 12:17:44] 2025-10-10 10:17:05,780 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-10 12:17:44] 2025-10-10 10:17:05,787 | INFO     | 
[2025-10-10 12:17:44] 2025-10-10 10:17:05,787 | INFO     | job summary report
[2025-10-10 12:17:44] 2025-10-10 10:17:05,787 | INFO     | --------------------------------------------------
[2025-10-10 12:17:44] 2025-10-10 10:17:05,787 | INFO     | PanDA job id: 6837353025
[2025-10-10 12:17:44] 2025-10-10 10:17:05,787 | INFO     | task id: 46676269
[2025-10-10 12:17:44] 2025-10-10 10:17:05,787 | INFO     | errors: (none)
[2025-10-10 12:17:44] 2025-10-10 10:17:05,787 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 12:17:44] 2025-10-10 10:17:05,787 | INFO     | pilot state: finished 
[2025-10-10 12:17:44] 2025-10-10 10:17:05,787 | INFO     | transexitcode: 0
[2025-10-10 12:17:44] 2025-10-10 10:17:05,788 | INFO     | exeerrorcode: 0
[2025-10-10 12:17:44] 2025-10-10 10:17:05,788 | INFO     | exeerrordiag: 
[2025-10-10 12:17:44] 2025-10-10 10:17:05,788 | INFO     | exitcode: 0
[2025-10-10 12:17:44] 2025-10-10 10:17:05,788 | INFO     | exitmsg: OK
[2025-10-10 12:17:44] 2025-10-10 10:17:05,788 | INFO     | cpuconsumptiontime: 15767 s
[2025-10-10 12:17:44] 2025-10-10 10:17:05,788 | INFO     | nevents: 400
[2025-10-10 12:17:44] 2025-10-10 10:17:05,788 | INFO     | neventsw: 0
[2025-10-10 12:17:44] 2025-10-10 10:17:05,788 | INFO     | pid: 64685
[2025-10-10 12:17:44] 2025-10-10 10:17:05,788 | INFO     | pgrp: 64685
[2025-10-10 12:17:44] 2025-10-10 10:17:05,788 | INFO     | corecount: 4
[2025-10-10 12:17:44] 2025-10-10 10:17:05,788 | INFO     | event service: False
[2025-10-10 12:17:44] 2025-10-10 10:17:05,788 | INFO     | sizes: {0: 2348858, 4: 2349120, 11: 2349148, 4212: 2384313, 4218: 2384451}
[2025-10-10 12:17:44] 2025-10-10 10:17:05,788 | INFO     | --------------------------------------------------
[2025-10-10 12:17:44] 2025-10-10 10:17:05,788 | INFO     | 
[2025-10-10 12:17:44] 2025-10-10 10:17:05,788 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-10 12:17:44] 2025-10-10 10:17:05,792 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6837353025: 2896738 B (within 2537553920 B limit)
[2025-10-10 12:17:44] 2025-10-10 10:17:05,792 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6837353025/HITS.46676269._022521.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-10 12:17:44] 2025-10-10 10:17:05,792 | INFO     | total size of present files: 0 B (workdir size: 2896738 B)
[2025-10-10 12:17:44] 2025-10-10 10:17:05,792 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6837353025/HITS.46676269._022521.pool.root.1 since it does not exist
[2025-10-10 12:17:44] 2025-10-10 10:17:05,806 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 12:17:44] 2025-10-10 10:17:05,806 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 12:17:44] 2025-10-10 10:17:05,806 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 12:17:44] 2025-10-10 10:17:05,806 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 12:17:44] 2025-10-10 10:17:05,806 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 12:17:44] 2025-10-10 10:17:05,806 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 12:17:44] 2025-10-10 10:17:05,806 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 12:17:44] 2025-10-10 10:17:05,806 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 12:17:44] 2025-10-10 10:17:05,806 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 12:17:44] 2025-10-10 10:17:05,806 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 12:17:44] 2025-10-10 10:17:05,806 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 12:17:44] 2025-10-10 10:17:05,806 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 12:17:44] 2025-10-10 10:17:05,806 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 12:17:44] 2025-10-10 10:17:05,806 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 12:17:44] 2025-10-10 10:17:05,806 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 12:17:44] 2025-10-10 10:17:05,806 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 12:17:44] 2025-10-10 10:17:05,806 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 12:17:44] 2025-10-10 10:17:05,807 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 12:17:44] 2025-10-10 10:17:05,807 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 12:17:44] 2025-10-10 10:17:05,807 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 12:17:44] 2025-10-10 10:17:05,807 | INFO     | job 6837353025 has completed (purged errors)
[2025-10-10 12:17:44] 2025-10-10 10:17:05,807 | INFO     | overall cleanup function is called
[2025-10-10 12:17:44] 2025-10-10 10:17:05,838 | INFO     | number of running child processes to parent process 64685: 1
[2025-10-10 12:17:44] 2025-10-10 10:17:05,838 | INFO     | maximum number of monitored processes: 6
[2025-10-10 12:17:44] 2025-10-10 10:17:05,838 | INFO     | aborting job monitoring since job object (job id=6837353025) has expired
[2025-10-10 12:17:44] 2025-10-10 10:17:06,814 | INFO     | --- collectZombieJob: --- 10, [64685]
[2025-10-10 12:17:44] 2025-10-10 10:17:06,814 | INFO     | zombie collector waiting for pid 64685
[2025-10-10 12:17:44] 2025-10-10 10:17:06,814 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 12:17:44] 2025-10-10 10:17:06,814 | INFO     | collected zombie processes
[2025-10-10 12:17:44] 2025-10-10 10:17:06,814 | INFO     | will attempt to kill all subprocesses of pid=64685
[2025-10-10 12:17:44] 2025-10-10 10:17:06,857 | INFO     | process IDs to be killed: [64685] (in reverse order)
[2025-10-10 12:17:44] 2025-10-10 10:17:06,889 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 12:17:44] 2025-10-10 10:17:06,889 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 12:17:44] 2025-10-10 10:17:06,891 | INFO     | did not find any defunct processes belonging to 64685
[2025-10-10 12:17:44] 2025-10-10 10:17:06,892 | INFO     | did not find any defunct processes belonging to 64685
[2025-10-10 12:17:44] 2025-10-10 10:17:06,892 | INFO     | ready for new job
[2025-10-10 12:17:44] 2025-10-10 10:17:06,892 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 12:17:44] 2025-10-10 10:17:06,893 | INFO     | ***************************************
[2025-10-10 12:17:44] 2025-10-10 10:17:06,893 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 12:17:44] 2025-10-10 10:17:06,893 | INFO     | ***************************************
[2025-10-10 12:17:44] 2025-10-10 10:17:06,893 | INFO     | 
[2025-10-10 12:17:44] 2025-10-10 10:17:06,894 | INFO     | architecture information:
[2025-10-10 12:17:44] 2025-10-10 10:17:06,894 | INFO     | executing command: cat /etc/os-release
[2025-10-10 12:17:44] 2025-10-10 10:17:06,907 | INFO     | cat /etc/os-release:
[2025-10-10 12:17:44] NAME="CentOS Linux"
[2025-10-10 12:17:44] VERSION="7 (Core)"
[2025-10-10 12:17:44] ID="centos"
[2025-10-10 12:17:44] ID_LIKE="rhel fedora"
[2025-10-10 12:17:44] VERSION_ID="7"
[2025-10-10 12:17:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 12:17:44] ANSI_COLOR="0;31"
[2025-10-10 12:17:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 12:17:44] HOME_URL="https://www.centos.org/"
[2025-10-10 12:17:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 12:17:44] 
[2025-10-10 12:17:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 12:17:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 12:17:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 12:17:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 12:17:44] 
[2025-10-10 12:17:44] 2025-10-10 10:17:06,907 | INFO     | ***************************************
[2025-10-10 12:17:44] 2025-10-10 10:17:07,410 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-10 12:17:44] 2025-10-10 10:17:07,426 | INFO     | sufficient remaining disk space (331762106368 B)
[2025-10-10 12:17:44] 2025-10-10 10:17:07,426 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 12:17:44] 2025-10-10 10:17:07,426 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 12:17:44] 2025-10-10 10:17:07,426 | INFO     | update_server=False
[2025-10-10 12:17:44] 2025-10-10 10:17:07,426 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 12:17:44] 2025-10-10 10:17:07,427 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 12:17:44] 2025-10-10 10:17:07,427 | INFO     | aborting loop
[2025-10-10 12:17:44] 2025-10-10 10:17:07,427 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 12:17:44] 2025-10-10 10:17:07,495 | INFO     | all data control threads have been joined
[2025-10-10 12:17:44] 2025-10-10 10:17:08,106 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 12:17:44] 2025-10-10 10:17:08,300 | INFO     | all payload control threads have been joined
[2025-10-10 12:17:44] 2025-10-10 10:17:08,432 | INFO     | [job] retrieve thread has finished
[2025-10-10 12:17:44] 2025-10-10 10:17:08,433 | INFO     | [data] copytool_in thread has finished
[2025-10-10 12:17:44] 2025-10-10 10:17:08,433 | INFO     | [job] job monitor thread has finished
[2025-10-10 12:17:44] 2025-10-10 10:17:08,433 | INFO     | [job] queue monitor thread has finished
[2025-10-10 12:17:44] 2025-10-10 10:17:08,501 | INFO     | [data] control thread has finished
[2025-10-10 12:17:44] 2025-10-10 10:17:08,664 | INFO     | all job control threads have been joined
[2025-10-10 12:17:44] 2025-10-10 10:17:08,712 | INFO     | [payload] validate_post thread has finished
[2025-10-10 12:17:44] 2025-10-10 10:17:09,174 | INFO     | [job] validate thread has finished
[2025-10-10 12:17:44] 2025-10-10 10:17:09,201 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 12:17:44] 2025-10-10 10:17:09,248 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 12:17:44] 2025-10-10 10:17:09,306 | INFO     | [payload] control thread has finished
[2025-10-10 12:17:44] 2025-10-10 10:17:09,405 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 12:17:44] 2025-10-10 10:17:09,430 | INFO     | [payload] failed_post thread has finished
[2025-10-10 12:17:44] 2025-10-10 10:17:09,670 | INFO     | [job] control thread has finished
[2025-10-10 12:17:44] 2025-10-10 10:17:10,112 | INFO     | [data] copytool_out thread has finished
[2025-10-10 12:17:44] 2025-10-10 10:17:10,647 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 12:17:44] 2025-10-10 10:17:14,654 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 12:17:44] 2025-10-10 10:17:18,118 | INFO     | job.realtimelogging is not enabled
[2025-10-10 12:17:44] 2025-10-10 10:17:19,123 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 12:17:44] 2025-10-10 10:17:37,273 | INFO     | PID=58094 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-10 12:17:44] 2025-10-10 10:17:37,273 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 12:17:44] 2025-10-10 10:17:37,273 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 12:17:44] 2025-10-10 10:17:37,274 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 12:17:44] 2025-10-10 10:17:37,453 | INFO     | [monitor] cgroup control has ended
[2025-10-10 12:17:44] 2025-10-10 10:17:39,004 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140231331198784)>', '<ExcThread(monitor, started 140229876905728)>']
[2025-10-10 12:17:44] 2025-10-10 10:17:39,284 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 12:17:44] 2025-10-10 10:17:39,284 | INFO     | [monitor] control thread has ended
[2025-10-10 12:17:44] 2025-10-10 10:17:44,029 | INFO     | all workflow threads have been joined
[2025-10-10 12:17:44] 2025-10-10 10:17:44,029 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 12:17:44] 2025-10-10 10:17:44,029 | INFO     | traces error code: 0
[2025-10-10 12:17:44] 2025-10-10 10:17:44,029 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 12:17:44] 2025-10-10 10:17:44,108 [wrapper] ==== pilot stdout END ====
[2025-10-10 12:17:44] 2025-10-10 10:17:44,112 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 12:17:44] 2025-10-10 10:17:44,116 [wrapper] pilotpid: 58094
[2025-10-10 12:17:44] 2025-10-10 10:17:44,120 [wrapper] Pilot exit status: 0
[2025-10-10 12:17:44] 2025-10-10 10:17:44,131 [wrapper] pandaids: 6837353025
[2025-10-10 12:17:44] 2025-10-10 10:17:44,153 [wrapper] cleanup supervisor_pilot   74529 58095
[2025-10-10 12:17:44] 2025-10-10 10:17:44,157 [wrapper] Test setup, not cleaning
[2025-10-10 12:17:44] 2025-10-10 10:17:44,161 [wrapper] apfmon messages muted
[2025-10-10 12:17:44] 2025-10-10 10:17:44,165 [wrapper] ==== wrapper stdout END ====
[2025-10-10 12:17:44] 2025-10-10 10:17:44,168 [wrapper] ==== wrapper stderr END ====
[2025-10-10 12:17:44]  *** Error codes and diagnostics ***
[2025-10-10 12:17:44]     "exeErrorCode": 0,
[2025-10-10 12:17:44]     "exeErrorDiag": "",
[2025-10-10 12:17:44]     "pilotErrorCode": 0,
[2025-10-10 12:17:44]     "pilotErrorDiag": "",
[2025-10-10 12:17:44]  *** Listing of results directory ***
[2025-10-10 12:17:44] total 411572
[2025-10-10 12:17:44] -rw-r--r-- 1 boinc boinc    557409 Oct  9 18:23 pilot3.tar.gz
[2025-10-10 12:17:44] -rw-r--r-- 1 boinc boinc      5112 Oct  9 18:32 queuedata.json
[2025-10-10 12:17:44] -rwx------ 1 boinc boinc     36292 Oct  9 18:32 runpilot2-wrapper.sh
[2025-10-10 12:17:44] -rw-r--r-- 1 boinc boinc       100 Oct 10 11:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 12:17:44] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 11:06 run_atlas
[2025-10-10 12:17:44] -rw-r--r-- 1 boinc boinc       105 Oct 10 11:06 job.xml
[2025-10-10 12:17:44] -rw-r--r-- 2 boinc boinc 221436623 Oct 10 11:06 EVNT.46676267._000925.pool.root.1
[2025-10-10 12:17:44] -rw-r--r-- 2 boinc boinc    569676 Oct 10 11:06 input.tar.gz
[2025-10-10 12:17:44] -rw-r--r-- 2 boinc boinc     15120 Oct 10 11:06 start_atlas.sh
[2025-10-10 12:17:44] drwxrwx--x 2 boinc boinc      4096 Oct 10 11:06 shared
[2025-10-10 12:17:44] -rw-r--r-- 1 boinc boinc         0 Oct 10 11:06 boinc_setup_complete
[2025-10-10 12:17:44] -rw-r--r-- 1 boinc boinc      6378 Oct 10 11:06 init_data.xml
[2025-10-10 12:17:44] -rw-r--r-- 1 boinc boinc         0 Oct 10 11:06 boinc_lockfile
[2025-10-10 12:17:44] -rw-r--r-- 1 boinc boinc      2549 Oct 10 11:06 pandaJob.out
[2025-10-10 12:17:44] -rw------- 1 boinc boinc    975462 Oct 10 11:06 agis_schedconf.cvmfs.json
[2025-10-10 12:17:44] -rw------- 1 boinc boinc   1560580 Oct 10 11:06 agis_ddmendpoints.agis.ALL.json
[2025-10-10 12:17:44] drwx------ 5 boinc boinc      4096 Oct 10 11:06 pilot3
[2025-10-10 12:17:44] -rw------- 1 boinc boinc 194317233 Oct 10 12:16 HITS.46676269._022521.pool.root.1
[2025-10-10 12:17:44] -rw-r--r-- 1 boinc boinc       529 Oct 10 12:16 boinc_task_state.xml
[2025-10-10 12:17:44] -rw------- 1 boinc boinc        95 Oct 10 12:16 pilot_heartbeat.json
[2025-10-10 12:17:44] -rw------- 1 boinc boinc      1025 Oct 10 12:16 memory_monitor_summary.json
[2025-10-10 12:17:44] -rw------- 1 boinc boinc    266703 Oct 10 12:16 log.46676269._022521.job.log.tgz.1
[2025-10-10 12:17:44] -rw------- 1 boinc boinc      7776 Oct 10 12:17 heartbeat.json
[2025-10-10 12:17:44] -rw-r--r-- 1 boinc boinc        27 Oct 10 12:17 wrapper_checkpoint.txt
[2025-10-10 12:17:44] -rw-r--r-- 1 boinc boinc      8192 Oct 10 12:17 boinc_mmap_file
[2025-10-10 12:17:44] -rw------- 1 boinc boinc      4822 Oct 10 12:17 pilotlog.txt
[2025-10-10 12:17:44] -rw------- 1 boinc boinc    629238 Oct 10 12:17 log.46676269._022521.job.log.1
[2025-10-10 12:17:44] -rw------- 1 boinc boinc       357 Oct 10 12:17 output.list
[2025-10-10 12:17:44] -rw-r--r-- 1 boinc boinc       620 Oct 10 12:17 runtime_log
[2025-10-10 12:17:44] -rw------- 1 boinc boinc    911360 Oct 10 12:17 result.tar.gz
[2025-10-10 12:17:44] -rw-r--r-- 1 boinc boinc      8797 Oct 10 12:17 runtime_log.err
[2025-10-10 12:17:44] -rw------- 1 boinc boinc       662 Oct 10 12:17 Gs1MDmKk8Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwlaNDmfwf1cm.diag
[2025-10-10 12:17:44] -rw-r--r-- 1 boinc boinc     22568 Oct 10 12:17 stderr.txt
[2025-10-10 12:17:44] HITS file was successfully produced:
[2025-10-10 12:17:44] -rw------- 1 boinc boinc 194317233 Oct 10 12:16 shared/HITS.pool.root.1
[2025-10-10 12:17:44]  *** Contents of shared directory: ***
[2025-10-10 12:17:44] total 407488
[2025-10-10 12:17:44] -rw-r--r-- 2 boinc boinc 221436623 Oct 10 11:06 ATLAS.root_0
[2025-10-10 12:17:44] -rw-r--r-- 2 boinc boinc    569676 Oct 10 11:06 input.tar.gz
[2025-10-10 12:17:44] -rw-r--r-- 2 boinc boinc     15120 Oct 10 11:06 start_atlas.sh
[2025-10-10 12:17:44] -rw------- 1 boinc boinc 194317233 Oct 10 12:16 HITS.pool.root.1
[2025-10-10 12:17:44] -rw------- 1 boinc boinc    911360 Oct 10 12:17 result.tar.gz
12:17:45 (54297): run_atlas exited; CPU time 15774.466857
12:17:45 (54297): called boinc_finish(0)

</stderr_txt>
]]>

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