Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:02:19 (17925): wrapper (7.7.26015): starting
21:02:19 (17925): wrapper: running run_atlas (--nthreads 12)
[2025-10-09 21:02:19] Arguments: --nthreads 12
[2025-10-09 21:02:19] Threads: 12
[2025-10-09 21:02:19] Checking for CVMFS
[2025-10-09 21:02:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 21:02:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 21:02:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 21:02:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 21:02:20] 2.11.2.0 6893 49229 86760 151528 3 59 18611166 20275200 1 130560 0 25552106 99.950 2261698 27116 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-09 21:02:20] CVMFS is ok
[2025-10-09 21:02:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 21:02:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 21:02:20] Further information can be found at the LHC@home message board.
[2025-10-09 21:02:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 21:02:20] Checking for apptainer binary...
[2025-10-09 21:02:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 21:02:20] Running /usr/bin/apptainer --version
[2025-10-09 21:02:20] apptainer version 1.3.2-1.el7
[2025-10-09 21:02:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 21:02:21] c-205-3.aglt2.org
[2025-10-09 21:02:21] apptainer works
[2025-10-09 21:02:21] Set ATHENA_PROC_NUMBER=12
[2025-10-09 21:02:21] Set ATHENA_CORE_NUMBER=12
[2025-10-09 21:02:21] Starting ATLAS job with PandaID=6837354280
[2025-10-09 21:02:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 22:17:56]  *** The last 200 lines of the pilot log: ***
[2025-10-09 22:17:56]  storage_token=
[2025-10-09 22:17:56]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6837354280/log.46676269._023304.job.log.tgz.1
[2025-10-09 22:17:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/eb/7f/log.46676269._023304.job.log.tgz.1
[2025-10-09 22:17:56]  workdir=None
[2025-10-09 22:17:56] ]
[2025-10-09 22:17:56] 2025-10-10 02:17:15,726 | INFO     | transferring file log.46676269._023304.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6837354280/log.46676269._023304.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-09 22:17:56] 2025-10-10 02:17:15,726 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6837354280/log.46676269._023304.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._023304.job
[2025-10-09 22:17:56] 2025-10-10 02:17:15,748 | INFO     | adding to output.list: log.46676269._023304.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/eb/7f/log.46676269._023304.job.log.tg
[2025-10-09 22:17:56] 2025-10-10 02:17:15,749 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-09 22:17:56] 2025-10-10 02:17:15,749 | INFO     | summary of transferred files:
[2025-10-09 22:17:56] 2025-10-10 02:17:15,750 | INFO     |  -- lfn=log.46676269._023304.job.log.tgz.1, status_code=0, status=transferred
[2025-10-09 22:17:56] 2025-10-10 02:17:15,750 | INFO     | stage-out finished correctly
[2025-10-09 22:17:56] 2025-10-10 02:17:17,075 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-09 22:17:56] 2025-10-10 02:17:17,292 | INFO     | time since job start (4481s) is within the limit (172800.0s)
[2025-10-09 22:17:56] 2025-10-10 02:17:17,659 | INFO     | monitor loop #335: job 0:6837354280 is in state 'finished'
[2025-10-09 22:17:56] 2025-10-10 02:17:17,659 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 22:17:56] 2025-10-10 02:17:18,408 | INFO     | PID=21718 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-09 22:17:56] 2025-10-10 02:17:19,040 | INFO     | job 6837354280 has state=finished
[2025-10-09 22:17:56] 2025-10-10 02:17:19,040 | INFO     | preparing for final server update for job 6837354280 in state='finished'
[2025-10-09 22:17:56] 2025-10-10 02:17:19,105 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-09 22:17:56] 2025-10-10 02:17:19,106 | INFO     | this job has now completed (state=finished)
[2025-10-09 22:17:56] 2025-10-10 02:17:19,106 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-09 22:17:56] 2025-10-10 02:17:19,106 | INFO     | log transfer has been attempted: DONE
[2025-10-09 22:17:56] 2025-10-10 02:17:19,106 | INFO     | job 6837354280 has finished - writing final server update
[2025-10-09 22:17:56] 2025-10-10 02:17:19,106 | INFO     | total number of processed events: 400 (read)
[2025-10-09 22:17:56] 2025-10-10 02:17:19,107 | INFO     | executing command: lscpu
[2025-10-09 22:17:56] 2025-10-10 02:17:19,136 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-09 22:17:56] 2025-10-10 02:17:19,409 | INFO     | time since job start (4483s) is within the limit (172800.0s)
[2025-10-09 22:17:56] 2025-10-10 02:17:20,175 | INFO     | monitor loop #336: job 0:6837354280 is in state 'finished'
[2025-10-09 22:17:56] 2025-10-10 02:17:20,175 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 22:17:56] 2025-10-10 02:17:21,412 | INFO     | time since job start (4485s) is within the limit (172800.0s)
[2025-10-09 22:17:56] 2025-10-10 02:17:22,678 | INFO     | monitor loop #337: job 0:6837354280 is in state 'finished'
[2025-10-09 22:17:56] 2025-10-10 02:17:22,685 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 22:17:56] 2025-10-10 02:17:23,417 | INFO     | time since job start (4487s) is within the limit (172800.0s)
[2025-10-09 22:17:56] 2025-10-10 02:17:24,272 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-09 22:17:56] 2025-10-10 02:17:24,275 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1673.5833333333333
[2025-10-09 22:17:56] 2025-10-10 02:17:24,278 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837354280/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 22:17:56] 2025-10-10 02:17:24,278 | INFO     | extracted standard info from prmon json
[2025-10-09 22:17:56] 2025-10-10 02:17:24,279 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 22:17:56] 2025-10-10 02:17:24,279 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 22:17:56] 2025-10-10 02:17:24,279 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 22:17:56] 2025-10-10 02:17:24,279 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 22:17:56] 2025-10-10 02:17:24,281 | INFO     | fitting pss+swap vs Time
[2025-10-09 22:17:56] 2025-10-10 02:17:24,282 | INFO     | sum of square deviations: 89127252.5
[2025-10-09 22:17:56] 2025-10-10 02:17:24,282 | INFO     | sum of deviations: -714870101.9999999
[2025-10-09 22:17:56] 2025-10-10 02:17:24,282 | INFO     | mean x: 1760060473.5
[2025-10-09 22:17:56] 2025-10-10 02:17:24,283 | INFO     | mean y: 2689413.6666666665
[2025-10-09 22:17:56] 2025-10-10 02:17:24,283 | INFO     | -- intersect: 14119747607.70348
[2025-10-09 22:17:56] 2025-10-10 02:17:24,283 | INFO     | intersect: 14119747607.70348
[2025-10-09 22:17:56] 2025-10-10 02:17:24,283 | INFO     | chi2: 0.08194715155660287
[2025-10-09 22:17:56] 2025-10-10 02:17:24,283 | INFO     | -- intersect: 14119747607.70348
[2025-10-09 22:17:56] 2025-10-10 02:17:24,283 | INFO     | current memory leak: -8.02 B/s (using 66 data points, chi2=0.08)
[2025-10-09 22:17:56] 2025-10-10 02:17:24,284 | INFO     | could have reported an average CPU frequency of 2076 MHz (6 samples)
[2025-10-09 22:17:56] 2025-10-10 02:17:24,284 | INFO     | ..............................
[2025-10-09 22:17:56] 2025-10-10 02:17:24,284 | INFO     | . Timing measurements:
[2025-10-09 22:17:56] 2025-10-10 02:17:24,284 | INFO     | . get job = 0 s
[2025-10-09 22:17:56] 2025-10-10 02:17:24,284 | INFO     | . initial setup = 2 s
[2025-10-09 22:17:56] 2025-10-10 02:17:24,284 | INFO     | . payload setup = 7 s
[2025-10-09 22:17:56] 2025-10-10 02:17:24,284 | INFO     | . stage-in = 0 s
[2025-10-09 22:17:56] 2025-10-10 02:17:24,284 | INFO     | . payload execution = 4451 s
[2025-10-09 22:17:56] 2025-10-10 02:17:24,284 | INFO     | . stage-out = 0 s
[2025-10-09 22:17:56] 2025-10-10 02:17:24,285 | INFO     | . log creation = 0 s
[2025-10-09 22:17:56] 2025-10-10 02:17:24,285 | INFO     | ..............................
[2025-10-09 22:17:56] 2025-10-10 02:17:24,369 | INFO     | 
[2025-10-09 22:17:56] 2025-10-10 02:17:24,370 | INFO     | job summary report
[2025-10-09 22:17:56] 2025-10-10 02:17:24,370 | INFO     | --------------------------------------------------
[2025-10-09 22:17:56] 2025-10-10 02:17:24,370 | INFO     | PanDA job id: 6837354280
[2025-10-09 22:17:56] 2025-10-10 02:17:24,370 | INFO     | task id: 46676269
[2025-10-09 22:17:56] 2025-10-10 02:17:24,370 | INFO     | errors: (none)
[2025-10-09 22:17:56] 2025-10-10 02:17:24,370 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 22:17:56] 2025-10-10 02:17:24,370 | INFO     | pilot state: finished 
[2025-10-09 22:17:56] 2025-10-10 02:17:24,370 | INFO     | transexitcode: 0
[2025-10-09 22:17:56] 2025-10-10 02:17:24,370 | INFO     | exeerrorcode: 0
[2025-10-09 22:17:56] 2025-10-10 02:17:24,371 | INFO     | exeerrordiag: 
[2025-10-09 22:17:56] 2025-10-10 02:17:24,371 | INFO     | exitcode: 0
[2025-10-09 22:17:56] 2025-10-10 02:17:24,371 | INFO     | exitmsg: OK
[2025-10-09 22:17:56] 2025-10-10 02:17:24,371 | INFO     | cpuconsumptiontime: 45914 s
[2025-10-09 22:17:56] 2025-10-10 02:17:24,371 | INFO     | nevents: 400
[2025-10-09 22:17:56] 2025-10-10 02:17:24,371 | INFO     | neventsw: 0
[2025-10-09 22:17:56] 2025-10-10 02:17:24,371 | INFO     | pid: 29766
[2025-10-09 22:17:56] 2025-10-10 02:17:24,371 | INFO     | pgrp: 29766
[2025-10-09 22:17:56] 2025-10-10 02:17:24,371 | INFO     | corecount: 12
[2025-10-09 22:17:56] 2025-10-10 02:17:24,371 | INFO     | event service: False
[2025-10-09 22:17:56] 2025-10-10 02:17:24,372 | INFO     | sizes: {0: 2348678, 1: 2348877, 5: 2349139, 11: 2349195, 4462: 2375267, 4463: 2384265, 4464: 2384449, 4471: 2384643}
[2025-10-09 22:17:56] 2025-10-10 02:17:24,372 | INFO     | --------------------------------------------------
[2025-10-09 22:17:56] 2025-10-10 02:17:24,372 | INFO     | 
[2025-10-09 22:17:56] 2025-10-10 02:17:24,372 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-09 22:17:56] 2025-10-10 02:17:24,396 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 22:17:56] 2025-10-10 02:17:24,396 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 22:17:56] 2025-10-10 02:17:24,396 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 22:17:56] 2025-10-10 02:17:24,397 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 22:17:56] 2025-10-10 02:17:24,397 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 22:17:56] 2025-10-10 02:17:24,397 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 22:17:56] 2025-10-10 02:17:24,397 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 22:17:56] 2025-10-10 02:17:24,397 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 22:17:56] 2025-10-10 02:17:24,397 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 22:17:56] 2025-10-10 02:17:24,398 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 22:17:56] 2025-10-10 02:17:24,398 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 22:17:56] 2025-10-10 02:17:24,398 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 22:17:56] 2025-10-10 02:17:24,398 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 22:17:56] 2025-10-10 02:17:24,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 22:17:56] 2025-10-10 02:17:24,398 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 22:17:56] 2025-10-10 02:17:24,399 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 22:17:56] 2025-10-10 02:17:24,399 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 22:17:56] 2025-10-10 02:17:24,399 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 22:17:56] 2025-10-10 02:17:24,399 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 22:17:56] 2025-10-10 02:17:24,399 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 22:17:56] 2025-10-10 02:17:24,400 | INFO     | job 6837354280 has completed (purged errors)
[2025-10-09 22:17:56] 2025-10-10 02:17:24,400 | INFO     | overall cleanup function is called
[2025-10-09 22:17:56] 2025-10-10 02:17:25,408 | INFO     | --- collectZombieJob: --- 10, [29766]
[2025-10-09 22:17:56] 2025-10-10 02:17:25,408 | INFO     | zombie collector waiting for pid 29766
[2025-10-09 22:17:56] 2025-10-10 02:17:25,408 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 22:17:56] 2025-10-10 02:17:25,408 | INFO     | collected zombie processes
[2025-10-09 22:17:56] 2025-10-10 02:17:25,408 | INFO     | will attempt to kill all subprocesses of pid=29766
[2025-10-09 22:17:56] 2025-10-10 02:17:25,497 | INFO     | process IDs to be killed: [29766] (in reverse order)
[2025-10-09 22:17:56] 2025-10-10 02:17:25,550 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 22:17:56] 2025-10-10 02:17:25,550 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 22:17:56] 2025-10-10 02:17:25,553 | INFO     | did not find any defunct processes belonging to 29766
[2025-10-09 22:17:56] 2025-10-10 02:17:25,555 | INFO     | did not find any defunct processes belonging to 29766
[2025-10-09 22:17:56] 2025-10-10 02:17:25,555 | INFO     | ready for new job
[2025-10-09 22:17:56] 2025-10-10 02:17:25,556 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 22:17:56] 2025-10-10 02:17:25,557 | INFO     | ***************************************
[2025-10-09 22:17:56] 2025-10-10 02:17:25,557 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 22:17:56] 2025-10-10 02:17:25,557 | INFO     | ***************************************
[2025-10-09 22:17:56] 2025-10-10 02:17:25,557 | INFO     | 
[2025-10-09 22:17:56] 2025-10-10 02:17:25,558 | INFO     | architecture information:
[2025-10-09 22:17:56] 2025-10-10 02:17:25,558 | INFO     | executing command: cat /etc/os-release
[2025-10-09 22:17:56] 2025-10-10 02:17:25,574 | INFO     | cat /etc/os-release:
[2025-10-09 22:17:56] NAME="CentOS Linux"
[2025-10-09 22:17:56] VERSION="7 (Core)"
[2025-10-09 22:17:56] ID="centos"
[2025-10-09 22:17:56] ID_LIKE="rhel fedora"
[2025-10-09 22:17:56] VERSION_ID="7"
[2025-10-09 22:17:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 22:17:56] ANSI_COLOR="0;31"
[2025-10-09 22:17:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 22:17:56] HOME_URL="https://www.centos.org/"
[2025-10-09 22:17:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 22:17:56] 
[2025-10-09 22:17:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 22:17:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 22:17:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 22:17:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 22:17:56] 
[2025-10-09 22:17:56] 2025-10-10 02:17:25,574 | INFO     | ***************************************
[2025-10-09 22:17:56] 2025-10-10 02:17:26,077 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-09 22:17:56] 2025-10-10 02:17:26,095 | INFO     | sufficient remaining disk space (29498540032 B)
[2025-10-09 22:17:56] 2025-10-10 02:17:26,095 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 22:17:56] 2025-10-10 02:17:26,096 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 22:17:56] 2025-10-10 02:17:26,096 | INFO     | update_server=False
[2025-10-09 22:17:56] 2025-10-10 02:17:26,096 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 22:17:56] 2025-10-10 02:17:26,096 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 22:17:56] 2025-10-10 02:17:26,193 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 22:17:56] 2025-10-10 02:17:26,194 | INFO     | aborting loop
[2025-10-09 22:17:56] 2025-10-10 02:17:26,346 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 22:17:56] 2025-10-10 02:17:26,513 | INFO     | all payload control threads have been joined
[2025-10-09 22:17:56] 2025-10-10 02:17:26,867 | INFO     | all data control threads have been joined
[2025-10-09 22:17:56] 2025-10-10 02:17:27,101 | INFO     | [job] retrieve thread has finished
[2025-10-09 22:17:56] 2025-10-10 02:17:27,102 | INFO     | [job] queue monitor thread has finished
[2025-10-09 22:17:56] 2025-10-10 02:17:27,199 | INFO     | [job] job monitor thread has finished
[2025-10-09 22:17:56] 2025-10-10 02:17:27,213 | INFO     | [payload] validate_post thread has finished
[2025-10-09 22:17:56] 2025-10-10 02:17:27,484 | INFO     | all job control threads have been joined
[2025-10-09 22:17:56] 2025-10-10 02:17:27,518 | INFO     | [payload] control thread has finished
[2025-10-09 22:17:56] 2025-10-10 02:17:27,604 | INFO     | [job] validate thread has finished
[2025-10-09 22:17:56] 2025-10-10 02:17:27,665 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 22:17:56] 2025-10-10 02:17:27,816 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 22:17:56] 2025-10-10 02:17:27,872 | INFO     | [data] control thread has finished
[2025-10-09 22:17:56] 2025-10-10 02:17:27,924 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 22:17:56] 2025-10-10 02:17:27,931 | INFO     | [payload] failed_post thread has finished
[2025-10-09 22:17:56] 2025-10-10 02:17:27,941 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 22:17:56] 2025-10-10 02:17:28,181 | INFO     | [data] copytool_in thread has finished
[2025-10-09 22:17:56] 2025-10-10 02:17:28,351 | INFO     | [data] copytool_out thread has finished
[2025-10-09 22:17:56] 2025-10-10 02:17:28,489 | INFO     | [job] control thread has finished
[2025-10-09 22:17:56] 2025-10-10 02:17:31,671 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 22:17:56] 2025-10-10 02:17:33,816 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-09 22:17:56] 2025-10-10 02:17:36,590 | INFO     | job.realtimelogging is not enabled
[2025-10-09 22:17:56] 2025-10-10 02:17:37,595 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 22:17:56] 2025-10-10 02:17:43,488 | INFO     | [monitor] cgroup control has ended
[2025-10-09 22:17:56] 2025-10-10 02:17:45,423 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140500718688064)>', '<ExcThread(monitor, started 140500409489152)>']
[2025-10-09 22:17:56] 2025-10-10 02:17:50,451 | INFO     | all workflow threads have been joined
[2025-10-09 22:17:56] 2025-10-10 02:17:50,452 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 22:17:56] 2025-10-10 02:17:50,452 | INFO     | traces error code: 0
[2025-10-09 22:17:56] 2025-10-10 02:17:50,453 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 22:17:56] 2025-10-10 02:17:56,619 | INFO     | PID=21718 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-09 22:17:56] 2025-10-10 02:17:56,620 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 22:17:56] 2025-10-10 02:17:56,620 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 22:17:56] 2025-10-10 02:17:56,620 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 22:17:56] 2025-10-10 02:17:56,620 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 22:17:56] 2025-10-10 02:17:56,620 | CRITICAL | thread 'MainThread' is not alive
[2025-10-09 22:17:56] 2025-10-10 02:17:56,620 | INFO     | [monitor] control thread has ended
[2025-10-09 22:17:56] 2025-10-10 02:17:56,715 [wrapper] ==== pilot stdout END ====
[2025-10-09 22:17:56] 2025-10-10 02:17:56,719 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 22:17:56] 2025-10-10 02:17:56,723 [wrapper] pilotpid: 21718
[2025-10-09 22:17:56] 2025-10-10 02:17:56,727 [wrapper] Pilot exit status: 0
[2025-10-09 22:17:56] 2025-10-10 02:17:56,742 [wrapper] pandaids: 6837354280
[2025-10-09 22:17:56] 2025-10-10 02:17:56,782 [wrapper] cleanup supervisor_pilot  8977 21719
[2025-10-09 22:17:56] 2025-10-10 02:17:56,786 [wrapper] Test setup, not cleaning
[2025-10-09 22:17:56] 2025-10-10 02:17:56,790 [wrapper] apfmon messages muted
[2025-10-09 22:17:56] 2025-10-10 02:17:56,794 [wrapper] ==== wrapper stdout END ====
[2025-10-09 22:17:56] 2025-10-10 02:17:56,797 [wrapper] ==== wrapper stderr END ====
[2025-10-09 22:17:56]  *** Error codes and diagnostics ***
[2025-10-09 22:17:56]     "exeErrorCode": 0,
[2025-10-09 22:17:56]     "exeErrorDiag": "",
[2025-10-09 22:17:56]     "pilotErrorCode": 0,
[2025-10-09 22:17:56]     "pilotErrorDiag": "",
[2025-10-09 22:17:56]  *** Listing of results directory ***
[2025-10-09 22:17:56] total 407180
[2025-10-09 22:17:56] -rwx------ 1 boincer umatlas     36292 Oct  9 13:19 runpilot2-wrapper.sh
[2025-10-09 22:17:56] -rw-r--r-- 1 boincer umatlas      5112 Oct  9 13:19 queuedata.json
[2025-10-09 22:17:56] -rw-r--r-- 1 boincer umatlas    557409 Oct  9 13:19 pilot3.tar.gz
[2025-10-09 22:17:56] -rw-r--r-- 1 boincer umatlas       100 Oct  9 21:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 22:17:56] -rwxr-xr-x 1 boincer umatlas      7986 Oct  9 21:02 run_atlas
[2025-10-09 22:17:56] -rw-r--r-- 1 boincer umatlas       105 Oct  9 21:02 job.xml
[2025-10-09 22:17:56] -rw-r--r-- 2 boincer umatlas 218526519 Oct  9 21:02 EVNT.46676267._000957.pool.root.1
[2025-10-09 22:17:56] -rw-r--r-- 2 boincer umatlas     15120 Oct  9 21:02 start_atlas.sh
[2025-10-09 22:17:56] drwxrwx--x 2 boincer umatlas      4096 Oct  9 21:02 shared
[2025-10-09 22:17:56] -rw-r--r-- 2 boincer umatlas    569671 Oct  9 21:02 input.tar.gz
[2025-10-09 22:17:56] -rw-r--r-- 1 boincer umatlas         0 Oct  9 21:02 boinc_lockfile
[2025-10-09 22:17:56] -rw-r--r-- 1 boincer umatlas      2546 Oct  9 21:02 pandaJob.out
[2025-10-09 22:17:56] -rw------- 1 boincer umatlas    975454 Oct  9 21:02 agis_schedconf.cvmfs.json
[2025-10-09 22:17:56] -rw------- 1 boincer umatlas   1560580 Oct  9 21:02 agis_ddmendpoints.agis.ALL.json
[2025-10-09 22:17:56] drwx------ 5 boincer umatlas      4096 Oct  9 21:02 pilot3
[2025-10-09 22:17:56] -rw-r--r-- 1 boincer umatlas      5952 Oct  9 22:12 init_data.xml
[2025-10-09 22:17:56] -rw------- 1 boincer umatlas 192490104 Oct  9 22:16 HITS.46676269._023304.pool.root.1
[2025-10-09 22:17:56] -rw------- 1 boincer umatlas      1049 Oct  9 22:17 memory_monitor_summary.json
[2025-10-09 22:17:56] -rw------- 1 boincer umatlas    367613 Oct  9 22:17 log.46676269._023304.job.log.tgz.1
[2025-10-09 22:17:56] -rw-r--r-- 1 boincer umatlas       529 Oct  9 22:17 boinc_task_state.xml
[2025-10-09 22:17:56] -rw------- 1 boincer umatlas      7846 Oct  9 22:17 heartbeat.json
[2025-10-09 22:17:56] -rw-r--r-- 1 boincer umatlas      8192 Oct  9 22:17 boinc_mmap_file
[2025-10-09 22:17:56] -rw-r--r-- 1 boincer umatlas        27 Oct  9 22:17 wrapper_checkpoint.txt
[2025-10-09 22:17:56] -rw------- 1 boincer umatlas        95 Oct  9 22:17 pilot_heartbeat.json
[2025-10-09 22:17:56] -rw------- 1 boincer umatlas       815 Oct  9 22:17 pilotlog.txt
[2025-10-09 22:17:56] -rw------- 1 boincer umatlas    651774 Oct  9 22:17 log.46676269._023304.job.log.1
[2025-10-09 22:17:56] -rw------- 1 boincer umatlas       357 Oct  9 22:17 output.list
[2025-10-09 22:17:56] -rw-r--r-- 1 boincer umatlas       620 Oct  9 22:17 runtime_log
[2025-10-09 22:17:56] -rw------- 1 boincer umatlas   1034240 Oct  9 22:17 result.tar.gz
[2025-10-09 22:17:56] -rw-r--r-- 1 boincer umatlas      8700 Oct  9 22:17 runtime_log.err
[2025-10-09 22:17:56] -rw------- 1 boincer umatlas       658 Oct  9 22:17 4s0NDmrT9Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmVPOMDmu3tJ4m.diag
[2025-10-09 22:17:56] -rw-r--r-- 1 boincer umatlas     22211 Oct  9 22:17 stderr.txt
[2025-10-09 22:17:56] HITS file was successfully produced:
[2025-10-09 22:17:56] -rw------- 1 boincer umatlas 192490104 Oct  9 22:16 shared/HITS.pool.root.1
[2025-10-09 22:17:56]  *** Contents of shared directory: ***
[2025-10-09 22:17:56] total 402980
[2025-10-09 22:17:56] -rw-r--r-- 2 boincer umatlas 218526519 Oct  9 21:02 ATLAS.root_0
[2025-10-09 22:17:56] -rw-r--r-- 2 boincer umatlas     15120 Oct  9 21:02 start_atlas.sh
[2025-10-09 22:17:56] -rw-r--r-- 2 boincer umatlas    569671 Oct  9 21:02 input.tar.gz
[2025-10-09 22:17:56] -rw------- 1 boincer umatlas 192490104 Oct  9 22:16 HITS.pool.root.1
[2025-10-09 22:17:56] -rw------- 1 boincer umatlas   1034240 Oct  9 22:17 result.tar.gz
22:17:58 (17925): run_atlas exited; CPU time 45899.215979
22:17:58 (17925): called boinc_finish(0)

</stderr_txt>
]]>

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