Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
03:01:15 (409345): wrapper (7.7.26015): starting
03:01:15 (409345): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 03:01:15] Arguments: --nthreads 12
[2025-10-10 03:01:15] Threads: 12
[2025-10-10 03:01:15] Checking for CVMFS
[2025-10-10 03:01:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 03:01:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 03:01:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 03:01:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 03:01:21] 2.13.2.0 409556 0 25228 151528 3 1 2332928 4096000 0 130560 0 0 0.000 1291 526 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-10 03:01:21] CVMFS is ok
[2025-10-10 03:01:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 03:01:22] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-10 03:01:22] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-10 03:01:22] Further information can be found at the LHC@home message board.
[2025-10-10 03:01:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 03:01:22] Checking for apptainer binary...
[2025-10-10 03:01:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 03:01:22] Running /usr/bin/apptainer --version
[2025-10-10 03:01:22] apptainer version 1.4.2
[2025-10-10 03:01:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 03:01:22] matisse
[2025-10-10 03:01:22] apptainer works
[2025-10-10 03:01:22] Set ATHENA_PROC_NUMBER=12
[2025-10-10 03:01:22] Set ATHENA_CORE_NUMBER=12
[2025-10-10 03:01:22] Starting ATLAS job with PandaID=6837359690
[2025-10-10 03:01:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 03:33:45]  *** The last 200 lines of the pilot log: ***
[2025-10-10 03:33:45] 2025-10-10 01:33:08,434 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6837359690/log.46676269._025218.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.466762
[2025-10-10 03:33:45] 2025-10-10 01:33:08,444 | INFO     | adding to output.list: log.46676269._025218.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/e4/log.46676269._025218.job.log.tg
[2025-10-10 03:33:45] 2025-10-10 01:33:08,445 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 03:33:45] 2025-10-10 01:33:08,445 | INFO     | summary of transferred files:
[2025-10-10 03:33:45] 2025-10-10 01:33:08,445 | INFO     |  -- lfn=log.46676269._025218.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 03:33:45] 2025-10-10 01:33:08,445 | INFO     | stage-out finished correctly
[2025-10-10 03:33:45] 2025-10-10 01:33:08,475 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 03:33:45] 2025-10-10 01:33:10,222 | INFO     | time since job start (1896s) is within the limit (172800.0s)
[2025-10-10 03:33:45] 2025-10-10 01:33:11,501 | INFO     | job 6837359690 has state=finished
[2025-10-10 03:33:45] 2025-10-10 01:33:11,501 | INFO     | preparing for final server update for job 6837359690 in state='finished'
[2025-10-10 03:33:45] 2025-10-10 01:33:11,501 | INFO     | this job has now completed (state=finished)
[2025-10-10 03:33:45] 2025-10-10 01:33:11,501 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 03:33:45] 2025-10-10 01:33:11,501 | INFO     | log transfer has been attempted: DONE
[2025-10-10 03:33:45] 2025-10-10 01:33:11,501 | INFO     | job 6837359690 has finished - writing final server update
[2025-10-10 03:33:45] 2025-10-10 01:33:11,501 | INFO     | total number of processed events: 400 (read)
[2025-10-10 03:33:45] 2025-10-10 01:33:11,502 | INFO     | executing command: lscpu
[2025-10-10 03:33:45] 2025-10-10 01:33:11,515 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 03:33:45] 2025-10-10 01:33:12,227 | INFO     | time since job start (1898s) is within the limit (172800.0s)
[2025-10-10 03:33:45] 2025-10-10 01:33:12,691 | WARNING  | process 420237 can no longer be monitored (due to stat problems) - aborting
[2025-10-10 03:33:45] 2025-10-10 01:33:12,692 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6837359690/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 03:33:45] 2025-10-10 01:33:12,692 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6837359690/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 03:33:45] 2025-10-10 01:33:12,692 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-10 03:33:45] 2025-10-10 01:33:12,692 | WARNING  | maxPSS not found in memory monitor output
[2025-10-10 03:33:45] 2025-10-10 01:33:12,693 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4199037 B
[2025-10-10 03:33:45] 2025-10-10 01:33:12,693 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15560 B
[2025-10-10 03:33:45] 2025-10-10 01:33:12,693 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-10 03:33:45] 2025-10-10 01:33:13,172 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 03:33:45] 2025-10-10 01:33:13,176 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3510.0564374999994
[2025-10-10 03:33:45] 2025-10-10 01:33:13,178 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6837359690/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 03:33:45] 2025-10-10 01:33:13,178 | INFO     | extracted standard info from prmon json
[2025-10-10 03:33:45] 2025-10-10 01:33:13,178 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 03:33:45] 2025-10-10 01:33:13,178 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 03:33:45] 2025-10-10 01:33:13,178 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 03:33:45] 2025-10-10 01:33:13,178 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 03:33:45] 2025-10-10 01:33:13,179 | INFO     | fitting pss+swap vs Time
[2025-10-10 03:33:45] 2025-10-10 01:33:13,179 | INFO     | sum of square deviations: 4279150.0
[2025-10-10 03:33:45] 2025-10-10 01:33:13,179 | INFO     | sum of deviations: -1717147041.5
[2025-10-10 03:33:45] 2025-10-10 01:33:13,179 | INFO     | mean x: 1760059118.5
[2025-10-10 03:33:45] 2025-10-10 01:33:13,179 | INFO     | mean y: 2903552.9583333335
[2025-10-10 03:33:45] 2025-10-10 01:33:13,179 | INFO     | -- intersect: 706283428469.6761
[2025-10-10 03:33:45] 2025-10-10 01:33:13,179 | INFO     | intersect: 706283428469.6761
[2025-10-10 03:33:45] 2025-10-10 01:33:13,179 | INFO     | chi2: 0.03386824500604683
[2025-10-10 03:33:45] 2025-10-10 01:33:13,179 | INFO     | -- intersect: 706283428469.6761
[2025-10-10 03:33:45] 2025-10-10 01:33:13,179 | INFO     | current memory leak: -401.28 B/s (using 24 data points, chi2=0.03)
[2025-10-10 03:33:45] 2025-10-10 01:33:13,180 | INFO     | could have reported an average CPU frequency of 3675 MHz (5 samples)
[2025-10-10 03:33:45] 2025-10-10 01:33:13,180 | INFO     | sufficient remaining disk space (532563361792 B)
[2025-10-10 03:33:45] 2025-10-10 01:33:13,180 | INFO     | ..............................
[2025-10-10 03:33:45] 2025-10-10 01:33:13,180 | INFO     | . Timing measurements:
[2025-10-10 03:33:45] 2025-10-10 01:33:13,180 | INFO     | . get job = 0 s
[2025-10-10 03:33:45] 2025-10-10 01:33:13,180 | INFO     | . initial setup = 1 s
[2025-10-10 03:33:45] 2025-10-10 01:33:13,180 | INFO     | . payload setup = 2 s
[2025-10-10 03:33:45] 2025-10-10 01:33:13,180 | INFO     | . stage-in = 0 s
[2025-10-10 03:33:45] 2025-10-10 01:33:13,180 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-10 03:33:45] 2025-10-10 01:33:13,180 | INFO     | . payload execution = 1874 s
[2025-10-10 03:33:45] 2025-10-10 01:33:13,180 | INFO     | . stage-out = 0 s
[2025-10-10 03:33:45] 2025-10-10 01:33:13,180 | INFO     | . log creation = 0 s
[2025-10-10 03:33:45] 2025-10-10 01:33:13,180 | INFO     | ..............................
[2025-10-10 03:33:45] 2025-10-10 01:33:13,211 | INFO     | 
[2025-10-10 03:33:45] 2025-10-10 01:33:13,211 | INFO     | job summary report
[2025-10-10 03:33:45] 2025-10-10 01:33:13,211 | INFO     | --------------------------------------------------
[2025-10-10 03:33:45] 2025-10-10 01:33:13,211 | INFO     | PanDA job id: 6837359690
[2025-10-10 03:33:45] 2025-10-10 01:33:13,212 | INFO     | task id: 46676269
[2025-10-10 03:33:45] 2025-10-10 01:33:13,212 | INFO     | errors: (none)
[2025-10-10 03:33:45] 2025-10-10 01:33:13,212 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 03:33:45] 2025-10-10 01:33:13,212 | INFO     | pilot state: finished 
[2025-10-10 03:33:45] 2025-10-10 01:33:13,212 | INFO     | transexitcode: 0
[2025-10-10 03:33:45] 2025-10-10 01:33:13,212 | INFO     | exeerrorcode: 0
[2025-10-10 03:33:45] 2025-10-10 01:33:13,212 | INFO     | exeerrordiag: 
[2025-10-10 03:33:45] 2025-10-10 01:33:13,212 | INFO     | exitcode: 0
[2025-10-10 03:33:45] 2025-10-10 01:33:13,212 | INFO     | exitmsg: OK
[2025-10-10 03:33:45] 2025-10-10 01:33:13,212 | INFO     | cpuconsumptiontime: 20360 s
[2025-10-10 03:33:45] 2025-10-10 01:33:13,212 | INFO     | nevents: 400
[2025-10-10 03:33:45] 2025-10-10 01:33:13,212 | INFO     | neventsw: 0
[2025-10-10 03:33:45] 2025-10-10 01:33:13,212 | INFO     | pid: 420237
[2025-10-10 03:33:45] 2025-10-10 01:33:13,212 | INFO     | pgrp: 420237
[2025-10-10 03:33:45] 2025-10-10 01:33:13,212 | INFO     | corecount: 12
[2025-10-10 03:33:45] 2025-10-10 01:33:13,212 | INFO     | event service: False
[2025-10-10 03:33:45] 2025-10-10 01:33:13,212 | INFO     | sizes: {0: 2348862, 2: 2349124, 10: 2349152, 1881: 2383123, 1886: 2383293}
[2025-10-10 03:33:45] 2025-10-10 01:33:13,212 | INFO     | --------------------------------------------------
[2025-10-10 03:33:45] 2025-10-10 01:33:13,212 | INFO     | 
[2025-10-10 03:33:45] 2025-10-10 01:33:13,212 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-10 03:33:45] 2025-10-10 01:33:13,215 | INFO     | size of work directory /var/lib/boinc-client/slots/0/PanDA_Pilot-6837359690: 4478215 B (within 2537553920 B limit)
[2025-10-10 03:33:45] 2025-10-10 01:33:13,215 | INFO     | pfn file=/var/lib/boinc-client/slots/0/PanDA_Pilot-6837359690/HITS.46676269._025218.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-10 03:33:45] 2025-10-10 01:33:13,215 | INFO     | total size of present files: 0 B (workdir size: 4478215 B)
[2025-10-10 03:33:45] 2025-10-10 01:33:13,216 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/0/PanDA_Pilot-6837359690/HITS.46676269._025218.pool.root.1 since it does not exist
[2025-10-10 03:33:45] 2025-10-10 01:33:13,222 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 03:33:45] 2025-10-10 01:33:13,222 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 03:33:45] 2025-10-10 01:33:13,222 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 03:33:45] 2025-10-10 01:33:13,222 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 03:33:45] 2025-10-10 01:33:13,222 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 03:33:45] 2025-10-10 01:33:13,222 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 03:33:45] 2025-10-10 01:33:13,222 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 03:33:45] 2025-10-10 01:33:13,222 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 03:33:45] 2025-10-10 01:33:13,222 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 03:33:45] 2025-10-10 01:33:13,222 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 03:33:45] 2025-10-10 01:33:13,222 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 03:33:45] 2025-10-10 01:33:13,222 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 03:33:45] 2025-10-10 01:33:13,222 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 03:33:45] 2025-10-10 01:33:13,222 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 03:33:45] 2025-10-10 01:33:13,222 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 03:33:45] 2025-10-10 01:33:13,222 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 03:33:45] 2025-10-10 01:33:13,222 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 03:33:45] 2025-10-10 01:33:13,222 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 03:33:45] 2025-10-10 01:33:13,222 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 03:33:45] 2025-10-10 01:33:13,222 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 03:33:45] 2025-10-10 01:33:13,222 | INFO     | job 6837359690 has completed (purged errors)
[2025-10-10 03:33:45] 2025-10-10 01:33:13,223 | INFO     | overall cleanup function is called
[2025-10-10 03:33:45] 2025-10-10 01:33:13,278 | INFO     | number of running child processes to parent process 420237: 1
[2025-10-10 03:33:45] 2025-10-10 01:33:13,278 | INFO     | maximum number of monitored processes: 6
[2025-10-10 03:33:45] 2025-10-10 01:33:13,279 | INFO     | aborting job monitoring since job object (job id=6837359690) has expired
[2025-10-10 03:33:45] 2025-10-10 01:33:14,230 | INFO     | --- collectZombieJob: --- 10, [420237]
[2025-10-10 03:33:45] 2025-10-10 01:33:14,230 | INFO     | zombie collector waiting for pid 420237
[2025-10-10 03:33:45] 2025-10-10 01:33:14,230 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 03:33:45] 2025-10-10 01:33:14,230 | INFO     | collected zombie processes
[2025-10-10 03:33:45] 2025-10-10 01:33:14,230 | INFO     | will attempt to kill all subprocesses of pid=420237
[2025-10-10 03:33:45] 2025-10-10 01:33:14,288 | INFO     | process IDs to be killed: [420237] (in reverse order)
[2025-10-10 03:33:45] 2025-10-10 01:33:14,313 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 03:33:45] 2025-10-10 01:33:14,313 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 03:33:45] 2025-10-10 01:33:14,315 | INFO     | did not find any defunct processes belonging to 420237
[2025-10-10 03:33:45] 2025-10-10 01:33:14,317 | INFO     | did not find any defunct processes belonging to 420237
[2025-10-10 03:33:45] 2025-10-10 01:33:14,317 | INFO     | ready for new job
[2025-10-10 03:33:45] 2025-10-10 01:33:14,317 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 03:33:45] 2025-10-10 01:33:14,318 | INFO     | ***************************************
[2025-10-10 03:33:45] 2025-10-10 01:33:14,318 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 03:33:45] 2025-10-10 01:33:14,318 | INFO     | ***************************************
[2025-10-10 03:33:45] 2025-10-10 01:33:14,318 | INFO     | 
[2025-10-10 03:33:45] 2025-10-10 01:33:14,318 | INFO     | architecture information:
[2025-10-10 03:33:45] 2025-10-10 01:33:14,318 | INFO     | executing command: cat /etc/os-release
[2025-10-10 03:33:45] 2025-10-10 01:33:14,325 | INFO     | cat /etc/os-release:
[2025-10-10 03:33:45] NAME="CentOS Linux"
[2025-10-10 03:33:45] VERSION="7 (Core)"
[2025-10-10 03:33:45] ID="centos"
[2025-10-10 03:33:45] ID_LIKE="rhel fedora"
[2025-10-10 03:33:45] VERSION_ID="7"
[2025-10-10 03:33:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 03:33:45] ANSI_COLOR="0;31"
[2025-10-10 03:33:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 03:33:45] HOME_URL="https://www.centos.org/"
[2025-10-10 03:33:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 03:33:45] 
[2025-10-10 03:33:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 03:33:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 03:33:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 03:33:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 03:33:45] 
[2025-10-10 03:33:45] 2025-10-10 01:33:14,325 | INFO     | ***************************************
[2025-10-10 03:33:45] 2025-10-10 01:33:14,828 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-10 03:33:45] 2025-10-10 01:33:14,836 | INFO     | sufficient remaining disk space (532568604672 B)
[2025-10-10 03:33:45] 2025-10-10 01:33:14,836 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 03:33:45] 2025-10-10 01:33:14,836 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 03:33:45] 2025-10-10 01:33:14,836 | INFO     | update_server=False
[2025-10-10 03:33:45] 2025-10-10 01:33:14,836 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 03:33:45] 2025-10-10 01:33:14,836 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 03:33:45] 2025-10-10 01:33:14,836 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 03:33:45] 2025-10-10 01:33:14,836 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 03:33:45] 2025-10-10 01:33:14,836 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 03:33:45] 2025-10-10 01:33:14,837 | INFO     | aborting loop
[2025-10-10 03:33:45] 2025-10-10 01:33:14,940 | INFO     | all job control threads have been joined
[2025-10-10 03:33:45] 2025-10-10 01:33:15,310 | INFO     | all payload control threads have been joined
[2025-10-10 03:33:45] 2025-10-10 01:33:15,531 | INFO     | all data control threads have been joined
[2025-10-10 03:33:45] 2025-10-10 01:33:15,841 | INFO     | [job] queue monitor thread has finished
[2025-10-10 03:33:45] 2025-10-10 01:33:15,841 | INFO     | [job] retrieve thread has finished
[2025-10-10 03:33:45] 2025-10-10 01:33:15,842 | INFO     | [job] job monitor thread has finished
[2025-10-10 03:33:45] 2025-10-10 01:33:15,945 | INFO     | [job] control thread has finished
[2025-10-10 03:33:45] 2025-10-10 01:33:16,313 | INFO     | [job] validate thread has finished
[2025-10-10 03:33:45] 2025-10-10 01:33:16,315 | INFO     | [payload] control thread has finished
[2025-10-10 03:33:45] 2025-10-10 01:33:16,363 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 03:33:45] 2025-10-10 01:33:16,449 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 03:33:45] 2025-10-10 01:33:16,528 | INFO     | [payload] failed_post thread has finished
[2025-10-10 03:33:45] 2025-10-10 01:33:16,536 | INFO     | [data] control thread has finished
[2025-10-10 03:33:45] 2025-10-10 01:33:16,646 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 03:33:45] 2025-10-10 01:33:16,770 | INFO     | [data] copytool_in thread has finished
[2025-10-10 03:33:45] 2025-10-10 01:33:16,841 | INFO     | [data] copytool_out thread has finished
[2025-10-10 03:33:45] 2025-10-10 01:33:17,176 | INFO     | [payload] validate_post thread has finished
[2025-10-10 03:33:45] 2025-10-10 01:33:18,842 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 03:33:45] 2025-10-10 01:33:25,316 | INFO     | job.realtimelogging is not enabled
[2025-10-10 03:33:45] 2025-10-10 01:33:26,321 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 03:33:45] 2025-10-10 01:33:37,462 | INFO     | [monitor] cgroup control has ended
[2025-10-10 03:33:45] 2025-10-10 01:33:38,029 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127419584034624)>', '<ExcThread(monitor, started 127419088348928)>']
[2025-10-10 03:33:45] 2025-10-10 01:33:43,054 | INFO     | all workflow threads have been joined
[2025-10-10 03:33:45] 2025-10-10 01:33:43,054 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 03:33:45] 2025-10-10 01:33:43,054 | INFO     | traces error code: 0
[2025-10-10 03:33:45] 2025-10-10 01:33:43,054 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 03:33:45] 2025-10-10 01:33:45,366 | INFO     | PID=413710 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 03:33:45] 2025-10-10 01:33:45,366 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 03:33:45] 2025-10-10 01:33:45,366 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 03:33:45] 2025-10-10 01:33:45,367 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 03:33:45] 2025-10-10 01:33:45,367 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 03:33:45] 2025-10-10 01:33:45,367 | CRITICAL | thread 'MainThread' is not alive
[2025-10-10 03:33:45] 2025-10-10 01:33:45,367 | INFO     | [monitor] control thread has ended
[2025-10-10 03:33:45] 2025-10-10 01:33:45,408 [wrapper] ==== pilot stdout END ====
[2025-10-10 03:33:45] 2025-10-10 01:33:45,409 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 03:33:45] 2025-10-10 01:33:45,410 [wrapper] pilotpid: 413710
[2025-10-10 03:33:45] 2025-10-10 01:33:45,412 [wrapper] Pilot exit status: 0
[2025-10-10 03:33:45] 2025-10-10 01:33:45,416 [wrapper] pandaids: 6837359690
[2025-10-10 03:33:45] 2025-10-10 01:33:45,433 [wrapper] cleanup supervisor_pilot  428366 413711
[2025-10-10 03:33:45] 2025-10-10 01:33:45,435 [wrapper] Test setup, not cleaning
[2025-10-10 03:33:45] 2025-10-10 01:33:45,436 [wrapper] apfmon messages muted
[2025-10-10 03:33:45] 2025-10-10 01:33:45,437 [wrapper] ==== wrapper stdout END ====
[2025-10-10 03:33:45] 2025-10-10 01:33:45,439 [wrapper] ==== wrapper stderr END ====
[2025-10-10 03:33:45]  *** Error codes and diagnostics ***
[2025-10-10 03:33:45]     "exeErrorCode": 0,
[2025-10-10 03:33:45]     "exeErrorDiag": "",
[2025-10-10 03:33:45]     "pilotErrorCode": 0,
[2025-10-10 03:33:45]     "pilotErrorDiag": "",
[2025-10-10 03:33:45]  *** Listing of results directory ***
[2025-10-10 03:33:45] total 411812
[2025-10-10 03:33:45] -rw-r--r-- 1 boinc boinc    557409 Okt  9 21:24 pilot3.tar.gz
[2025-10-10 03:33:45] -rwx------ 1 boinc boinc     36292 Okt  9 21:34 runpilot2-wrapper.sh
[2025-10-10 03:33:45] -rw-r--r-- 1 boinc boinc      5112 Okt  9 21:34 queuedata.json
[2025-10-10 03:33:45] -rw-r--r-- 1 boinc boinc       100 Okt 10 03:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 03:33:45] -rwxr-xr-x 1 boinc boinc      7986 Okt 10 03:01 run_atlas
[2025-10-10 03:33:45] -rw-r--r-- 1 boinc boinc       105 Okt 10 03:01 job.xml
[2025-10-10 03:33:45] -rw-r--r-- 2 boinc boinc 219924858 Okt 10 03:01 EVNT.46676267._001043.pool.root.1
[2025-10-10 03:33:45] -rw-r--r-- 2 boinc boinc    569676 Okt 10 03:01 input.tar.gz
[2025-10-10 03:33:45] -rw-r--r-- 2 boinc boinc     15120 Okt 10 03:01 start_atlas.sh
[2025-10-10 03:33:45] drwxrwx--x 2 boinc boinc      4096 Okt 10 03:01 shared
[2025-10-10 03:33:45] -rw-r--r-- 1 boinc boinc         0 Okt 10 03:01 boinc_setup_complete
[2025-10-10 03:33:45] -rw-r--r-- 1 boinc boinc      9677 Okt 10 03:01 init_data.xml
[2025-10-10 03:33:45] -rw-r--r-- 1 boinc boinc         0 Okt 10 03:01 boinc_lockfile
[2025-10-10 03:33:45] -rw-r--r-- 1 boinc boinc      2549 Okt 10 03:01 pandaJob.out
[2025-10-10 03:33:45] -rw------- 1 boinc boinc    975454 Okt 10 03:01 agis_schedconf.cvmfs.json
[2025-10-10 03:33:45] -rw------- 1 boinc boinc   1560580 Okt 10 03:01 agis_ddmendpoints.agis.ALL.json
[2025-10-10 03:33:45] drwx------ 5 boinc boinc      4096 Okt 10 03:01 pilot3
[2025-10-10 03:33:45] -rw------- 1 boinc boinc        95 Okt 10 03:32 pilot_heartbeat.json
[2025-10-10 03:33:45] -rw------- 1 boinc boinc 196547428 Okt 10 03:32 HITS.46676269._025218.pool.root.1
[2025-10-10 03:33:45] -rw------- 1 boinc boinc      1008 Okt 10 03:33 memory_monitor_summary.json
[2025-10-10 03:33:45] -rw-r--r-- 1 boinc boinc       529 Okt 10 03:33 boinc_task_state.xml
[2025-10-10 03:33:45] -rw------- 1 boinc boinc    346392 Okt 10 03:33 log.46676269._025218.job.log.tgz.1
[2025-10-10 03:33:45] -rw------- 1 boinc boinc      7733 Okt 10 03:33 heartbeat.json
[2025-10-10 03:33:45] -rw-r--r-- 1 boinc boinc      8192 Okt 10 03:33 boinc_mmap_file
[2025-10-10 03:33:45] -rw-r--r-- 1 boinc boinc        27 Okt 10 03:33 wrapper_checkpoint.txt
[2025-10-10 03:33:45] -rw------- 1 boinc boinc       816 Okt 10 03:33 pilotlog.txt
[2025-10-10 03:33:45] -rw------- 1 boinc boinc    313438 Okt 10 03:33 log.46676269._025218.job.log.1
[2025-10-10 03:33:45] -rw------- 1 boinc boinc       357 Okt 10 03:33 output.list
[2025-10-10 03:33:45] -rw-r--r-- 1 boinc boinc       620 Okt 10 03:33 runtime_log
[2025-10-10 03:33:45] -rw------- 1 boinc boinc    675840 Okt 10 03:33 result.tar.gz
[2025-10-10 03:33:45] -rw-r--r-- 1 boinc boinc      8766 Okt 10 03:33 runtime_log.err
[2025-10-10 03:33:45] -rw------- 1 boinc boinc       645 Okt 10 03:33 BHuLDmqaBR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZBbNDm0Q9ESm.diag
[2025-10-10 03:33:45] -rw-r--r-- 1 boinc boinc     22658 Okt 10 03:33 stderr.txt
[2025-10-10 03:33:45] HITS file was successfully produced:
[2025-10-10 03:33:45] -rw------- 1 boinc boinc 196547428 Okt 10 03:32 shared/HITS.pool.root.1
[2025-10-10 03:33:45]  *** Contents of shared directory: ***
[2025-10-10 03:33:45] total 407960
[2025-10-10 03:33:45] -rw-r--r-- 2 boinc boinc 219924858 Okt 10 03:01 ATLAS.root_0
[2025-10-10 03:33:45] -rw-r--r-- 2 boinc boinc    569676 Okt 10 03:01 input.tar.gz
[2025-10-10 03:33:45] -rw-r--r-- 2 boinc boinc     15120 Okt 10 03:01 start_atlas.sh
[2025-10-10 03:33:45] -rw------- 1 boinc boinc 196547428 Okt 10 03:32 HITS.pool.root.1
[2025-10-10 03:33:45] -rw------- 1 boinc boinc    675840 Okt 10 03:33 result.tar.gz
03:33:47 (409345): run_atlas exited; CPU time 20363.231289
03:33:47 (409345): called boinc_finish(0)

</stderr_txt>
]]>

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