Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:16:46 (2207733): wrapper (7.7.26015): starting
10:16:46 (2207733): wrapper: running run_atlas (--nthreads 4)
[2025-10-10 10:16:46] Arguments: --nthreads 4
[2025-10-10 10:16:46] Threads: 4
[2025-10-10 10:16:46] Checking for CVMFS
[2025-10-10 10:16:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 10:16:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 10:16:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 10:16:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 10:16:46] 2.9.2.0 1857307 1011 85224 151539 3 16 29172021 36864001 0 130560 0 916697 99.991 34570 859 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-10 10:16:46] CVMFS is ok
[2025-10-10 10:16:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 10:16:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 10:16:46] Further information can be found at the LHC@home message board.
[2025-10-10 10:16:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 10:16:46] Checking for apptainer binary...
[2025-10-10 10:16:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 10:16:46] Running /usr/bin/apptainer --version
[2025-10-10 10:16:46] apptainer version 1.4.1-1.1
[2025-10-10 10:16:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 10:16:46] thA319a
[2025-10-10 10:16:46] apptainer works
[2025-10-10 10:16:46] Set ATHENA_PROC_NUMBER=4
[2025-10-10 10:16:46] Set ATHENA_CORE_NUMBER=4
[2025-10-10 10:16:46] Starting ATLAS job with PandaID=6837352558
[2025-10-10 10:16:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 11:30:06]  *** The last 200 lines of the pilot log: ***
[2025-10-10 11:30:06] 2025-10-10 09:29:14,700 | INFO     | [job] retrieve thread has finished
[2025-10-10 11:30:06] 2025-10-10 09:29:14,701 | INFO     | [job] queue monitor thread has finished
[2025-10-10 11:30:06] 2025-10-10 09:29:14,739 | INFO     | all data control threads have been joined
[2025-10-10 11:30:06] 2025-10-10 09:29:14,789 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 11:30:06] 2025-10-10 09:29:14,852 | INFO     | [data] copytool_in thread has finished
[2025-10-10 11:30:06] 2025-10-10 09:29:14,981 | INFO     | [payload] validate_post thread has finished
[2025-10-10 11:30:06] 2025-10-10 09:29:15,113 | INFO     | [job] job monitor thread has finished
[2025-10-10 11:30:06] 2025-10-10 09:29:15,190 | INFO     | all payload control threads have been joined
[2025-10-10 11:30:06] 2025-10-10 09:29:15,251 | INFO     | [payload] failed_post thread has finished
[2025-10-10 11:30:06] 2025-10-10 09:29:15,526 | INFO     | [job] control thread has finished
[2025-10-10 11:30:06] 2025-10-10 09:29:15,632 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 11:30:06] 2025-10-10 09:29:15,664 | INFO     | [job] validate thread has finished
[2025-10-10 11:30:06] 2025-10-10 09:29:15,745 | INFO     | [data] control thread has finished
[2025-10-10 11:30:06] 2025-10-10 09:29:15,806 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 11:30:06] 2025-10-10 09:29:15,848 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 11:30:06] 2025-10-10 09:29:15,946 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 11:30:06] 2025-10-10 09:29:16,196 | INFO     | [payload] control thread has finished
[2025-10-10 11:30:06] 2025-10-10 09:29:16,568 | INFO     | [data] copytool_out thread has finished
[2025-10-10 11:30:06] 2025-10-10 09:29:18,796 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 11:30:06] 2025-10-10 09:29:43,491 | INFO     | PID=2211526 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 11:30:06] 2025-10-10 09:29:43,492 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 11:30:06] 2025-10-10 09:29:43,492 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 11:30:06] 2025-10-10 09:29:43,492 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 11:30:06] 2025-10-10 09:29:59,452 | INFO     | [monitor] cgroup control has ended
[2025-10-10 11:30:06] 2025-10-10 09:30:01,064 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139920343918400)>', '<ExcThread(monitor, started 139919448053504)>']
[2025-10-10 11:30:06] 2025-10-10 09:30:01,588 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 11:30:06] 2025-10-10 09:30:01,588 | INFO     | [monitor] control thread has ended
[2025-10-10 11:30:06] 2025-10-10 09:30:06,089 | INFO     | all workflow threads have been joined
[2025-10-10 11:30:06] 2025-10-10 09:30:06,090 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 11:30:06] 2025-10-10 09:30:06,090 | INFO     | traces error code: 0
[2025-10-10 11:30:06] 2025-10-10 09:30:06,090 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 11:30:06] 2025-10-10 09:30:06,171 [wrapper] ==== pilot stdout END ====
[2025-10-10 11:30:06] 2025-10-10 09:30:06,175 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 11:30:06] 2025-10-10 09:30:06,179 [wrapper] pilotpid: 2211526
[2025-10-10 11:30:06] 2025-10-10 09:30:06,183 [wrapper] Pilot exit status: 0
[2025-10-10 11:30:06] 2025-10-10 09:30:06,195 [wrapper] pandaids: 6837352558
[2025-10-10 11:30:06] 2025-10-10 09:30:06,218 [wrapper] cleanup supervisor_pilot 2227961 2211527
[2025-10-10 11:30:06] 2025-10-10 09:30:06,222 [wrapper] Test setup, not cleaning
[2025-10-10 11:30:06] 2025-10-10 09:30:06,226 [wrapper] apfmon messages muted
[2025-10-10 11:30:06] 2025-10-10 09:30:06,230 [wrapper] ==== wrapper stdout END ====
[2025-10-10 11:30:06] 2025-10-10 09:30:06,233 [wrapper] ==== wrapper stderr END ====
[2025-10-10 11:30:06]  *** Error codes and diagnostics ***
[2025-10-10 11:30:06]     "exeErrorCode": 0,
[2025-10-10 11:30:06]     "exeErrorDiag": "",
[2025-10-10 11:30:06]     "pilotErrorCode": 0,
[2025-10-10 11:30:06]     "pilotErrorDiag": "",
[2025-10-10 11:30:06]  *** Listing of results directory ***
[2025-10-10 11:30:06] total 414472
[2025-10-10 11:30:06] -rw-r--r-- 1 boinc boinc    557409 Oct  9 17:29 pilot3.tar.gz
[2025-10-10 11:30:06] -rw-r--r-- 1 boinc boinc      5112 Oct  9 18:14 queuedata.json
[2025-10-10 11:30:06] -rwx------ 1 boinc boinc     36292 Oct  9 18:14 runpilot2-wrapper.sh
[2025-10-10 11:30:06] -rw-r--r-- 1 boinc boinc       100 Oct 10 10:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 11:30:06] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 10:16 run_atlas
[2025-10-10 11:30:06] -rw-r--r-- 1 boinc boinc       105 Oct 10 10:16 job.xml
[2025-10-10 11:30:06] -rw-r--r-- 2 boinc boinc 219819617 Oct 10 10:16 EVNT.46676267._000915.pool.root.1
[2025-10-10 11:30:06] -rw-r--r-- 2 boinc boinc    569677 Oct 10 10:16 input.tar.gz
[2025-10-10 11:30:06] -rw-r--r-- 2 boinc boinc     15120 Oct 10 10:16 start_atlas.sh
[2025-10-10 11:30:06] drwxrwx--x 2 boinc boinc      4096 Oct 10 10:16 shared
[2025-10-10 11:30:06] -rw-r--r-- 1 boinc boinc         0 Oct 10 10:16 boinc_setup_complete
[2025-10-10 11:30:06] -rw-r--r-- 1 boinc boinc      6367 Oct 10 10:16 init_data.xml
[2025-10-10 11:30:06] -rw-r--r-- 1 boinc boinc         0 Oct 10 10:16 boinc_lockfile
[2025-10-10 11:30:06] -rw-r--r-- 1 boinc boinc      2548 Oct 10 10:16 pandaJob.out
[2025-10-10 11:30:06] -rw------- 1 boinc boinc    975462 Oct 10 10:16 agis_schedconf.cvmfs.json
[2025-10-10 11:30:06] -rw------- 1 boinc boinc   1560580 Oct 10 10:16 agis_ddmendpoints.agis.ALL.json
[2025-10-10 11:30:06] drwx------ 5 boinc boinc      4096 Oct 10 10:16 pilot3
[2025-10-10 11:30:06] -rw------- 1 boinc boinc 198902801 Oct 10 11:28 HITS.46676269._022269.pool.root.1
[2025-10-10 11:30:06] -rw-r--r-- 1 boinc boinc       529 Oct 10 11:28 boinc_task_state.xml
[2025-10-10 11:30:06] -rw------- 1 boinc boinc      1022 Oct 10 11:28 memory_monitor_summary.json
[2025-10-10 11:30:06] -rw------- 1 boinc boinc    264509 Oct 10 11:29 log.46676269._022269.job.log.tgz.1
[2025-10-10 11:30:06] -rw------- 1 boinc boinc      7767 Oct 10 11:29 heartbeat.json
[2025-10-10 11:30:06] -rw------- 1 boinc boinc        95 Oct 10 11:29 pilot_heartbeat.json
[2025-10-10 11:30:06] -rw-r--r-- 1 boinc boinc      8192 Oct 10 11:29 boinc_mmap_file
[2025-10-10 11:30:06] -rw-r--r-- 1 boinc boinc        27 Oct 10 11:29 wrapper_checkpoint.txt
[2025-10-10 11:30:06] -rw------- 1 boinc boinc      4752 Oct 10 11:30 pilotlog.txt
[2025-10-10 11:30:06] -rw------- 1 boinc boinc    643030 Oct 10 11:30 log.46676269._022269.job.log.1
[2025-10-10 11:30:06] -rw------- 1 boinc boinc       357 Oct 10 11:30 output.list
[2025-10-10 11:30:06] -rw-r--r-- 1 boinc boinc       620 Oct 10 11:30 runtime_log
[2025-10-10 11:30:06] -rw------- 1 boinc boinc    921600 Oct 10 11:30 result.tar.gz
[2025-10-10 11:30:06] -rw-r--r-- 1 boinc boinc      8782 Oct 10 11:30 runtime_log.err
[2025-10-10 11:30:06] -rw------- 1 boinc boinc       659 Oct 10 11:30 bgkNDmET8Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6iaNDmND7wYm.diag
[2025-10-10 11:30:06] -rw-r--r-- 1 boinc boinc      6635 Oct 10 11:30 stderr.txt
[2025-10-10 11:30:06] HITS file was successfully produced:
[2025-10-10 11:30:06] -rw------- 1 boinc boinc 198902801 Oct 10 11:28 shared/HITS.pool.root.1
[2025-10-10 11:30:06]  *** Contents of shared directory: ***
[2025-10-10 11:30:06] total 410396
[2025-10-10 11:30:06] -rw-r--r-- 2 boinc boinc 219819617 Oct 10 10:16 ATLAS.root_0
[2025-10-10 11:30:06] -rw-r--r-- 2 boinc boinc    569677 Oct 10 10:16 input.tar.gz
[2025-10-10 11:30:06] -rw-r--r-- 2 boinc boinc     15120 Oct 10 10:16 start_atlas.sh
[2025-10-10 11:30:06] -rw------- 1 boinc boinc 198902801 Oct 10 11:28 HITS.pool.root.1
[2025-10-10 11:30:06] -rw------- 1 boinc boinc    921600 Oct 10 11:30 result.tar.gz
11:30:07 (2207733): run_atlas exited; CPU time 16187.744137
11:30:07 (2207733): called boinc_finish(0)

</stderr_txt>
]]>

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