Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:01:40 (3802819): wrapper (7.7.26015): starting
21:01:40 (3802819): wrapper: running run_atlas (--nthreads 8)
[2025-10-09 21:01:40] Arguments: --nthreads 8
[2025-10-09 21:01:40] Threads: 8
[2025-10-09 21:01:40] Checking for CVMFS
[2025-10-09 21:01:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 21:01:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 21:01:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 21:01:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 21:01:42] 2.13.2.0 1149533 125679 387880 151528 3 741 30491801 32935936 28439 16776704 0 242202530 99.625 228239791 20750 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-09 21:01:42] CVMFS is ok
[2025-10-09 21:01:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 21:01:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 21:01:42] Further information can be found at the LHC@home message board.
[2025-10-09 21:01:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 21:01:42] Checking for apptainer binary...
[2025-10-09 21:01:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 21:01:42] Running /usr/bin/apptainer --version
[2025-10-09 21:01:42] apptainer version 1.4.3-1.el9
[2025-10-09 21:01:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 21:01:43] c6-2-11-4.aglt2.org
[2025-10-09 21:01:43] apptainer works
[2025-10-09 21:01:43] Set ATHENA_PROC_NUMBER=8
[2025-10-09 21:01:43] Set ATHENA_CORE_NUMBER=8
[2025-10-09 21:01:43] Starting ATLAS job with PandaID=6837346031
[2025-10-09 21:01:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 05:56:11]  *** The last 200 lines of the pilot log: ***
[2025-10-10 05:56:11] 2025-10-10 09:55:11,885 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 05:56:11] 2025-10-10 09:55:11,933 | INFO     | fitting pss+swap vs Time
[2025-10-10 05:56:11] 2025-10-10 09:55:11,956 | INFO     | sum of square deviations: 43600599870.49232
[2025-10-10 05:56:11] 2025-10-10 09:55:11,981 | INFO     | sum of deviations: 180124384043.34604
[2025-10-10 05:56:11] 2025-10-10 09:55:11,981 | INFO     | mean x: 1760074186.0538461
[2025-10-10 05:56:11] 2025-10-10 09:55:11,982 | INFO     | mean y: 2183307.201923077
[2025-10-10 05:56:11] 2025-10-10 09:55:12,002 | INFO     | -- intersect: -7269099188.342396
[2025-10-10 05:56:11] 2025-10-10 09:55:12,002 | INFO     | intersect: -7269099188.342396
[2025-10-10 05:56:11] 2025-10-10 09:55:12,003 | INFO     | chi2: 5.561982869369441
[2025-10-10 05:56:11] 2025-10-10 09:55:12,004 | INFO     | sum of square deviations: 42355045748.94379
[2025-10-10 05:56:11] 2025-10-10 09:55:12,050 | INFO     | sum of deviations: 207677635537.93582
[2025-10-10 05:56:11] 2025-10-10 09:55:12,051 | INFO     | mean x: 1760074033.5592234
[2025-10-10 05:56:11] 2025-10-10 09:55:12,051 | INFO     | mean y: 2186653.739805825
[2025-10-10 05:56:11] 2025-10-10 09:55:12,051 | INFO     | -- intersect: -8627907050.512945
[2025-10-10 05:56:11] 2025-10-10 09:55:12,051 | INFO     | intersect: -8627907050.512945
[2025-10-10 05:56:11] 2025-10-10 09:55:12,052 | INFO     | chi2: 4.907258274306338
[2025-10-10 05:56:11] 2025-10-10 09:55:12,052 | INFO     | current chi2=4.907258274306338 (change=11.771424156459663 %)
[2025-10-10 05:56:11] 2025-10-10 09:55:12,052 | INFO     | right removable region: 514
[2025-10-10 05:56:11] 2025-10-10 09:55:12,053 | INFO     | sum of square deviations: 42354870068.943756
[2025-10-10 05:56:11] 2025-10-10 09:55:12,103 | INFO     | sum of deviations: 42090640570.786514
[2025-10-10 05:56:11] 2025-10-10 09:55:12,103 | INFO     | mean x: 1760074338.5592234
[2025-10-10 05:56:11] 2025-10-10 09:55:12,103 | INFO     | mean y: 2200190.4660194176
[2025-10-10 05:56:11] 2025-10-10 09:55:12,103 | INFO     | -- intersect: -1746893980.7962692
[2025-10-10 05:56:11] 2025-10-10 09:55:12,103 | INFO     | intersect: -1746893980.7962692
[2025-10-10 05:56:11] 2025-10-10 09:55:12,104 | INFO     | chi2: 2.1622628943662163
[2025-10-10 05:56:11] 2025-10-10 09:55:12,104 | INFO     | current chi2=2.1622628943662163 (change=61.124243904560046 %)
[2025-10-10 05:56:11] 2025-10-10 09:55:12,123 | INFO     | sum of square deviations: 41133187960.23555
[2025-10-10 05:56:11] 2025-10-10 09:55:12,150 | INFO     | sum of deviations: -25772810702.764698
[2025-10-10 05:56:11] 2025-10-10 09:55:12,151 | INFO     | mean x: 1760074491.0588236
[2025-10-10 05:56:11] 2025-10-10 09:55:12,151 | INFO     | mean y: 2208651.725490196
[2025-10-10 05:56:11] 2025-10-10 09:55:12,151 | INFO     | -- intersect: 1105018060.1447108
[2025-10-10 05:56:11] 2025-10-10 09:55:12,151 | INFO     | intersect: 1105018060.1447108
[2025-10-10 05:56:11] 2025-10-10 09:55:12,152 | INFO     | chi2: 1.3315399868602087
[2025-10-10 05:56:11] 2025-10-10 09:55:12,152 | INFO     | current chi2=1.3315399868602087 (change=38.41914457628899 %)
[2025-10-10 05:56:11] 2025-10-10 09:55:12,153 | INFO     | sum of square deviations: 39935134386.15843
[2025-10-10 05:56:11] 2025-10-10 09:55:12,159 | INFO     | sum of deviations: -63435694526.41582
[2025-10-10 05:56:11] 2025-10-10 09:55:12,160 | INFO     | mean x: 1760074643.5643563
[2025-10-10 05:56:11] 2025-10-10 09:55:12,160 | INFO     | mean y: 2213439.0435643564
[2025-10-10 05:56:11] 2025-10-10 09:55:12,160 | INFO     | -- intersect: 2798036193.844091
[2025-10-10 05:56:11] 2025-10-10 09:55:12,160 | INFO     | intersect: 2798036193.844091
[2025-10-10 05:56:11] 2025-10-10 09:55:12,161 | INFO     | chi2: 1.0501165969285737
[2025-10-10 05:56:11] 2025-10-10 09:55:12,161 | INFO     | current chi2=1.0501165969285737 (change=21.135181271967323 %)
[2025-10-10 05:56:11] 2025-10-10 09:55:12,162 | INFO     | left removable region: 30
[2025-10-10 05:56:11] 2025-10-10 09:55:12,162 | INFO     | sum of square deviations: 35157398743.01658
[2025-10-10 05:56:11] 2025-10-10 09:55:12,168 | INFO     | sum of deviations: -55627031415.99168
[2025-10-10 05:56:11] 2025-10-10 09:55:12,169 | INFO     | mean x: 1760074918.0785124
[2025-10-10 05:56:11] 2025-10-10 09:55:12,169 | INFO     | mean y: 2220048.7892561983
[2025-10-10 05:56:11] 2025-10-10 09:55:12,169 | INFO     | -- intersect: 2787060402.8242683
[2025-10-10 05:56:11] 2025-10-10 09:55:12,169 | INFO     | intersect: 2787060402.8242683
[2025-10-10 05:56:11] 2025-10-10 09:55:12,170 | INFO     | chi2: 0.24310817117001682
[2025-10-10 05:56:11] 2025-10-10 09:55:12,170 | INFO     | -- intersect: 2787060402.8242683
[2025-10-10 05:56:11] 2025-10-10 09:55:12,170 | INFO     | current memory leak: -1.58 B/s (using 484 data points, chi2=0.24)
[2025-10-10 05:56:11] 2025-10-10 09:55:12,172 | INFO     | could have reported an average CPU frequency of 2648 MHz (21 samples)
[2025-10-10 05:56:11] 2025-10-10 09:55:12,172 | INFO     | ..............................
[2025-10-10 05:56:11] 2025-10-10 09:55:12,172 | INFO     | . Timing measurements:
[2025-10-10 05:56:11] 2025-10-10 09:55:12,172 | INFO     | . get job = 0 s
[2025-10-10 05:56:11] 2025-10-10 09:55:12,172 | INFO     | . initial setup = 5 s
[2025-10-10 05:56:11] 2025-10-10 09:55:12,173 | INFO     | . payload setup = 49 s
[2025-10-10 05:56:11] 2025-10-10 09:55:12,173 | INFO     | . stage-in = 0 s
[2025-10-10 05:56:11] 2025-10-10 09:55:12,173 | INFO     | . payload execution = 31732 s
[2025-10-10 05:56:11] 2025-10-10 09:55:12,173 | INFO     | . stage-out = 9 s
[2025-10-10 05:56:11] 2025-10-10 09:55:12,173 | INFO     | . log creation = 2 s
[2025-10-10 05:56:11] 2025-10-10 09:55:12,173 | INFO     | ..............................
[2025-10-10 05:56:11] 2025-10-10 09:55:12,353 | INFO     | 
[2025-10-10 05:56:11] 2025-10-10 09:55:12,353 | INFO     | job summary report
[2025-10-10 05:56:11] 2025-10-10 09:55:12,353 | INFO     | --------------------------------------------------
[2025-10-10 05:56:11] 2025-10-10 09:55:12,353 | INFO     | PanDA job id: 6837346031
[2025-10-10 05:56:11] 2025-10-10 09:55:12,353 | INFO     | task id: 46676269
[2025-10-10 05:56:11] 2025-10-10 09:55:12,354 | INFO     | errors: (none)
[2025-10-10 05:56:11] 2025-10-10 09:55:12,354 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 05:56:11] 2025-10-10 09:55:12,354 | INFO     | pilot state: finished 
[2025-10-10 05:56:11] 2025-10-10 09:55:12,354 | INFO     | transexitcode: 0
[2025-10-10 05:56:11] 2025-10-10 09:55:12,354 | INFO     | exeerrorcode: 0
[2025-10-10 05:56:11] 2025-10-10 09:55:12,354 | INFO     | exeerrordiag: 
[2025-10-10 05:56:11] 2025-10-10 09:55:12,354 | INFO     | exitcode: 0
[2025-10-10 05:56:11] 2025-10-10 09:55:12,354 | INFO     | exitmsg: OK
[2025-10-10 05:56:11] 2025-10-10 09:55:12,354 | INFO     | cpuconsumptiontime: 46220 s
[2025-10-10 05:56:11] 2025-10-10 09:55:12,354 | INFO     | nevents: 400
[2025-10-10 05:56:11] 2025-10-10 09:55:12,354 | INFO     | neventsw: 0
[2025-10-10 05:56:11] 2025-10-10 09:55:12,354 | INFO     | pid: 3817296
[2025-10-10 05:56:11] 2025-10-10 09:55:12,355 | INFO     | pgrp: 3817296
[2025-10-10 05:56:11] 2025-10-10 09:55:12,355 | INFO     | corecount: 8
[2025-10-10 05:56:11] 2025-10-10 09:55:12,355 | INFO     | event service: False
[2025-10-10 05:56:11] 2025-10-10 09:55:12,355 | INFO     | sizes: {0: 2348027, 2: 2348712, 3: 2348740, 4: 2348911, 5: 2348939, 16: 2348995, 27: 2349151, 38: 2349179, 41: 2349469, 50: 2349497, 31788: 2387794, 31789: 2388073
[2025-10-10 05:56:11] 2025-10-10 09:55:12,355 | INFO     | --------------------------------------------------
[2025-10-10 05:56:11] 2025-10-10 09:55:12,355 | INFO     | 
[2025-10-10 05:56:11] 2025-10-10 09:55:12,355 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-10 05:56:11] 2025-10-10 09:55:12,461 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 05:56:11] 2025-10-10 09:55:12,462 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 05:56:11] 2025-10-10 09:55:12,462 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 05:56:11] 2025-10-10 09:55:12,462 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 05:56:11] 2025-10-10 09:55:12,462 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 05:56:11] 2025-10-10 09:55:12,462 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 05:56:11] 2025-10-10 09:55:12,462 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 05:56:11] 2025-10-10 09:55:12,462 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 05:56:11] 2025-10-10 09:55:12,463 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 05:56:11] 2025-10-10 09:55:12,463 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 05:56:11] 2025-10-10 09:55:12,463 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 05:56:11] 2025-10-10 09:55:12,463 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 05:56:11] 2025-10-10 09:55:12,463 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 05:56:11] 2025-10-10 09:55:12,463 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 05:56:11] 2025-10-10 09:55:12,463 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 05:56:11] 2025-10-10 09:55:12,463 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 05:56:11] 2025-10-10 09:55:12,463 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 05:56:11] 2025-10-10 09:55:12,463 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 05:56:11] 2025-10-10 09:55:12,464 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 05:56:11] 2025-10-10 09:55:12,464 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 05:56:11] 2025-10-10 09:55:12,464 | INFO     | job 6837346031 has completed (purged errors)
[2025-10-10 05:56:11] 2025-10-10 09:55:12,464 | INFO     | overall cleanup function is called
[2025-10-10 05:56:11] 2025-10-10 09:55:13,491 | INFO     | --- collectZombieJob: --- 10, [3817296]
[2025-10-10 05:56:11] 2025-10-10 09:55:13,491 | INFO     | zombie collector waiting for pid 3817296
[2025-10-10 05:56:11] 2025-10-10 09:55:13,491 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 05:56:11] 2025-10-10 09:55:13,491 | INFO     | collected zombie processes
[2025-10-10 05:56:11] 2025-10-10 09:55:13,491 | INFO     | will attempt to kill all subprocesses of pid=3817296
[2025-10-10 05:56:11] 2025-10-10 09:55:15,140 | INFO     | process IDs to be killed: [3817296] (in reverse order)
[2025-10-10 05:56:11] 2025-10-10 09:55:15,343 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 05:56:11] 2025-10-10 09:55:15,344 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 05:56:11] 2025-10-10 09:55:15,445 | INFO     | did not find any defunct processes belonging to 3817296
[2025-10-10 05:56:11] 2025-10-10 09:55:15,560 | INFO     | did not find any defunct processes belonging to 3817296
[2025-10-10 05:56:11] 2025-10-10 09:55:15,561 | INFO     | ready for new job
[2025-10-10 05:56:11] 2025-10-10 09:55:15,561 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 05:56:11] 2025-10-10 09:55:15,582 | INFO     | ***************************************
[2025-10-10 05:56:11] 2025-10-10 09:55:15,583 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 05:56:11] 2025-10-10 09:55:15,583 | INFO     | ***************************************
[2025-10-10 05:56:11] 2025-10-10 09:55:15,583 | INFO     | 
[2025-10-10 05:56:11] 2025-10-10 09:55:15,620 | INFO     | architecture information:
[2025-10-10 05:56:11] 2025-10-10 09:55:15,632 | INFO     | executing command: cat /etc/os-release
[2025-10-10 05:56:11] 2025-10-10 09:55:15,752 | INFO     | cat /etc/os-release:
[2025-10-10 05:56:11] NAME="CentOS Linux"
[2025-10-10 05:56:11] VERSION="7 (Core)"
[2025-10-10 05:56:11] ID="centos"
[2025-10-10 05:56:11] ID_LIKE="rhel fedora"
[2025-10-10 05:56:11] VERSION_ID="7"
[2025-10-10 05:56:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 05:56:11] ANSI_COLOR="0;31"
[2025-10-10 05:56:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 05:56:11] HOME_URL="https://www.centos.org/"
[2025-10-10 05:56:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 05:56:11] 
[2025-10-10 05:56:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 05:56:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 05:56:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 05:56:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 05:56:11] 
[2025-10-10 05:56:11] 2025-10-10 09:55:15,752 | INFO     | ***************************************
[2025-10-10 05:56:11] 2025-10-10 09:55:16,256 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-10 05:56:11] 2025-10-10 09:55:16,388 | INFO     | sufficient remaining disk space (93908369408 B)
[2025-10-10 05:56:11] 2025-10-10 09:55:16,389 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 05:56:11] 2025-10-10 09:55:16,389 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 05:56:11] 2025-10-10 09:55:16,389 | INFO     | update_server=False
[2025-10-10 05:56:11] 2025-10-10 09:55:16,389 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 05:56:11] 2025-10-10 09:55:16,389 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 05:56:11] 2025-10-10 09:55:16,449 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 05:56:11] 2025-10-10 09:55:16,453 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 05:56:11] 2025-10-10 09:55:16,453 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 05:56:11] 2025-10-10 09:55:16,453 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 05:56:11] 2025-10-10 09:55:16,454 | INFO     | will abort loop
[2025-10-10 05:56:11] 2025-10-10 09:55:16,473 | INFO     | all job control threads have been joined
[2025-10-10 05:56:11] 2025-10-10 09:55:16,710 | INFO     | all data control threads have been joined
[2025-10-10 05:56:11] 2025-10-10 09:55:17,140 | INFO     | all payload control threads have been joined
[2025-10-10 05:56:11] 2025-10-10 09:55:17,368 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 05:56:11] 2025-10-10 09:55:17,395 | INFO     | [job] retrieve thread has finished
[2025-10-10 05:56:11] 2025-10-10 09:55:17,473 | INFO     | [job] job monitor thread has finished
[2025-10-10 05:56:11] 2025-10-10 09:55:17,480 | INFO     | [job] control thread has finished
[2025-10-10 05:56:11] 2025-10-10 09:55:17,576 | INFO     | [job] validate thread has finished
[2025-10-10 05:56:11] 2025-10-10 09:55:17,716 | INFO     | [data] control thread has finished
[2025-10-10 05:56:11] 2025-10-10 09:55:18,102 | INFO     | [payload] validate_post thread has finished
[2025-10-10 05:56:11] 2025-10-10 09:55:18,137 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 05:56:11] 2025-10-10 09:55:18,148 | INFO     | [payload] control thread has finished
[2025-10-10 05:56:11] 2025-10-10 09:55:18,169 | INFO     | [payload] failed_post thread has finished
[2025-10-10 05:56:11] 2025-10-10 09:55:18,179 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 05:56:11] 2025-10-10 09:55:18,374 | INFO     | [job] queue monitor thread has finished
[2025-10-10 05:56:11] 2025-10-10 09:55:18,456 | INFO     | [data] copytool_out thread has finished
[2025-10-10 05:56:11] 2025-10-10 09:55:18,794 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 05:56:11] 2025-10-10 09:55:18,795 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 05:56:11] 2025-10-10 09:55:18,802 | INFO     | [data] copytool_in thread has finished
[2025-10-10 05:56:11] 2025-10-10 09:55:20,397 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 05:56:11] 2025-10-10 09:55:47,029 | INFO     | PID=3808510 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 05:56:11] 2025-10-10 09:55:47,029 | INFO     | .. there are 31 such processes running
[2025-10-10 05:56:11] 2025-10-10 09:55:47,029 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 05:56:11] 2025-10-10 09:55:47,030 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 05:56:11] 2025-10-10 09:55:47,030 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 05:56:11] 2025-10-10 09:56:02,420 | INFO     | [monitor] cgroup control has ended
[2025-10-10 05:56:11] 2025-10-10 09:56:03,697 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139916447459136)>', '<ExcThread(monitor, started 139916101003008)>']
[2025-10-10 05:56:11] 2025-10-10 09:56:04,132 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 05:56:11] 2025-10-10 09:56:04,132 | INFO     | [monitor] control thread has ended
[2025-10-10 05:56:11] 2025-10-10 09:56:08,723 | INFO     | all workflow threads have been joined
[2025-10-10 05:56:11] 2025-10-10 09:56:08,723 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 05:56:11] 2025-10-10 09:56:08,724 | INFO     | traces error code: 0
[2025-10-10 05:56:11] 2025-10-10 09:56:08,724 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 05:56:11] 2025-10-10 09:56:09,691 [wrapper] ==== pilot stdout END ====
[2025-10-10 05:56:11] 2025-10-10 09:56:09,710 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 05:56:11] 2025-10-10 09:56:09,771 [wrapper] pilotpid: 3808510
[2025-10-10 05:56:11] 2025-10-10 09:56:09,815 [wrapper] Pilot exit status: 0
[2025-10-10 05:56:11] 2025-10-10 09:56:09,950 [wrapper] pandaids: 6837346031
[2025-10-10 05:56:11] 2025-10-10 09:56:10,075 [wrapper] cleanup supervisor_pilot 1268433 3808511
[2025-10-10 05:56:11] 2025-10-10 09:56:10,111 [wrapper] Test setup, not cleaning
[2025-10-10 05:56:11] 2025-10-10 09:56:10,157 [wrapper] apfmon messages muted
[2025-10-10 05:56:11] 2025-10-10 09:56:10,193 [wrapper] ==== wrapper stdout END ====
[2025-10-10 05:56:11] 2025-10-10 09:56:10,213 [wrapper] ==== wrapper stderr END ====
[2025-10-10 05:56:11]  *** Error codes and diagnostics ***
[2025-10-10 05:56:11]     "exeErrorCode": 0,
[2025-10-10 05:56:11]     "exeErrorDiag": "",
[2025-10-10 05:56:11]     "pilotErrorCode": 0,
[2025-10-10 05:56:11]     "pilotErrorDiag": "",
[2025-10-10 05:56:11]  *** Listing of results directory ***
[2025-10-10 05:56:11] total 422640
[2025-10-10 05:56:11] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 10:08 pilot3.tar.gz
[2025-10-10 05:56:11] -rwx------. 1 boincer umatlas     36292 Oct  9 10:23 runpilot2-wrapper.sh
[2025-10-10 05:56:11] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 10:23 queuedata.json
[2025-10-10 05:56:11] -rw-r--r--. 1 boincer umatlas       100 Oct  9 21:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 05:56:11] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  9 21:01 run_atlas
[2025-10-10 05:56:11] -rw-r--r--. 1 boincer umatlas       105 Oct  9 21:01 job.xml
[2025-10-10 05:56:11] -rw-r--r--. 2 boincer umatlas 219420952 Oct  9 21:01 EVNT.46676267._000834.pool.root.1
[2025-10-10 05:56:11] -rw-r--r--. 2 boincer umatlas    569675 Oct  9 21:01 input.tar.gz
[2025-10-10 05:56:11] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 21:01 start_atlas.sh
[2025-10-10 05:56:11] drwxrwx--x. 2 boincer umatlas      4096 Oct  9 21:01 shared
[2025-10-10 05:56:11] -rw-r--r--. 1 boincer umatlas         0 Oct  9 21:01 boinc_lockfile
[2025-10-10 05:56:11] -rw-r--r--. 1 boincer umatlas      2549 Oct  9 21:01 pandaJob.out
[2025-10-10 05:56:11] -rw-------. 1 boincer umatlas    975454 Oct  9 21:03 agis_schedconf.cvmfs.json
[2025-10-10 05:56:11] drwx------. 5 boincer umatlas      4096 Oct  9 21:03 pilot3
[2025-10-10 05:56:11] -rw-r--r--. 1 boincer umatlas      6858 Oct 10 05:49 init_data.xml
[2025-10-10 05:56:11] -rw-------. 1 boincer umatlas 200385239 Oct 10 05:52 HITS.46676269._020067.pool.root.1
[2025-10-10 05:56:11] -rw-r--r--. 1 boincer umatlas       531 Oct 10 05:53 boinc_task_state.xml
[2025-10-10 05:56:11] -rw-------. 1 boincer umatlas      1042 Oct 10 05:54 memory_monitor_summary.json
[2025-10-10 05:56:11] -rw-------. 1 boincer umatlas   1560580 Oct 10 05:54 agis_ddmendpoints.agis.ALL.json
[2025-10-10 05:56:11] -rw-------. 1 boincer umatlas    682483 Oct 10 05:54 log.46676269._020067.job.log.tgz.1
[2025-10-10 05:56:11] -rw-------. 1 boincer umatlas        95 Oct 10 05:55 pilot_heartbeat.json
[2025-10-10 05:56:11] -rw-------. 1 boincer umatlas      7826 Oct 10 05:55 heartbeat.json
[2025-10-10 05:56:11] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 05:56 boinc_mmap_file
[2025-10-10 05:56:11] -rw-r--r--. 1 boincer umatlas        28 Oct 10 05:56 wrapper_checkpoint.txt
[2025-10-10 05:56:11] -rw-------. 1 boincer umatlas      5010 Oct 10 05:56 pilotlog.txt
[2025-10-10 05:56:11] -rw-------. 1 boincer umatlas   3852586 Oct 10 05:56 log.46676269._020067.job.log.1
[2025-10-10 05:56:11] -rw-------. 1 boincer umatlas       357 Oct 10 05:56 output.list
[2025-10-10 05:56:11] -rw-r--r--. 1 boincer umatlas       620 Oct 10 05:56 runtime_log
[2025-10-10 05:56:11] -rw-------. 1 boincer umatlas   4556800 Oct 10 05:56 result.tar.gz
[2025-10-10 05:56:11] -rw-r--r--. 1 boincer umatlas      8709 Oct 10 05:56 runtime_log.err
[2025-10-10 05:56:11] -rw-------. 1 boincer umatlas       657 Oct 10 05:56 aWbMDmsj6Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYMaNDmfA4gQn.diag
[2025-10-10 05:56:11] -rw-r--r--. 1 boincer umatlas     21067 Oct 10 05:56 stderr.txt
[2025-10-10 05:56:11] HITS file was successfully produced:
[2025-10-10 05:56:11] -rw-------. 1 boincer umatlas 200385239 Oct 10 05:52 shared/HITS.pool.root.1
[2025-10-10 05:56:11]  *** Contents of shared directory: ***
[2025-10-10 05:56:11] total 415004
[2025-10-10 05:56:11] -rw-r--r--. 2 boincer umatlas 219420952 Oct  9 21:01 ATLAS.root_0
[2025-10-10 05:56:11] -rw-r--r--. 2 boincer umatlas    569675 Oct  9 21:01 input.tar.gz
[2025-10-10 05:56:11] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 21:01 start_atlas.sh
[2025-10-10 05:56:11] -rw-------. 1 boincer umatlas 200385239 Oct 10 05:52 HITS.pool.root.1
[2025-10-10 05:56:11] -rw-------. 1 boincer umatlas   4556800 Oct 10 05:56 result.tar.gz
05:56:12 (3802819): run_atlas exited; CPU time 47833.328635
05:56:12 (3802819): called boinc_finish(0)

</stderr_txt>
]]>

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