Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:10:28 (3952331): wrapper (7.7.26015): starting
17:10:28 (3952331): wrapper: running run_atlas (--nthreads 3)
[2025-10-10 17:10:28] Arguments: --nthreads 3
[2025-10-10 17:10:28] Threads: 3
[2025-10-10 17:10:28] Checking for CVMFS
[2025-10-10 17:10:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 17:10:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 17:10:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 17:10:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 17:10:28] 2.9.2.0 3449862 1658 79540 151550 1 57 30936741 36864000 0 130560 0 1318499 99.991 51977 973 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-10 17:10:28] CVMFS is ok
[2025-10-10 17:10:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 17:10:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 17:10:28] Further information can be found at the LHC@home message board.
[2025-10-10 17:10:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 17:10:28] Checking for apptainer binary...
[2025-10-10 17:10:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 17:10:28] Running /usr/bin/apptainer --version
[2025-10-10 17:10:28] apptainer version 1.4.1-1.1
[2025-10-10 17:10:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 17:10:28] thA357
[2025-10-10 17:10:28] apptainer works
[2025-10-10 17:10:28] Set ATHENA_PROC_NUMBER=3
[2025-10-10 17:10:28] Set ATHENA_CORE_NUMBER=3
[2025-10-10 17:10:28] Starting ATLAS job with PandaID=6837354039
[2025-10-10 17:10:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 18:34:46]  *** The last 200 lines of the pilot log: ***
[2025-10-10 18:34:46]  status_code=0
[2025-10-10 18:34:46]  storage_token=
[2025-10-10 18:34:46]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6837354039/log.46676269._023063.job.log.tgz.1
[2025-10-10 18:34:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/b1/log.46676269._023063.job.log.tgz.1
[2025-10-10 18:34:46]  workdir=None
[2025-10-10 18:34:46] ]
[2025-10-10 18:34:46] 2025-10-10 16:33:33,632 | INFO     | transferring file log.46676269._023063.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6837354039/log.46676269._023063.job.log.tgz.1 to /local/data/boinc/
[2025-10-10 18:34:46] 2025-10-10 16:33:33,632 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6837354039/log.46676269._023063.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0230
[2025-10-10 18:34:46] 2025-10-10 16:33:33,644 | INFO     | adding to output.list: log.46676269._023063.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/b1/log.46676269._023063.job.log.tg
[2025-10-10 18:34:46] 2025-10-10 16:33:33,645 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 18:34:46] 2025-10-10 16:33:33,645 | INFO     | summary of transferred files:
[2025-10-10 18:34:46] 2025-10-10 16:33:33,645 | INFO     |  -- lfn=log.46676269._023063.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 18:34:46] 2025-10-10 16:33:33,645 | INFO     | stage-out finished correctly
[2025-10-10 18:34:46] 2025-10-10 16:33:34,391 | INFO     | time since job start (4980s) is within the limit (172800.0s)
[2025-10-10 18:34:46] 2025-10-10 16:33:36,283 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 18:34:46] 2025-10-10 16:33:36,398 | INFO     | time since job start (4982s) is within the limit (172800.0s)
[2025-10-10 18:34:46] 2025-10-10 16:33:37,445 | WARNING  | process 3962485 can no longer be monitored (due to stat problems) - aborting
[2025-10-10 18:34:46] 2025-10-10 16:33:37,445 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6837354039/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 18:34:46] 2025-10-10 16:33:37,480 | INFO     | number of running child processes to parent process 3962485: 1
[2025-10-10 18:34:46] 2025-10-10 16:33:37,480 | INFO     | maximum number of monitored processes: 6
[2025-10-10 18:34:46] 2025-10-10 16:33:38,404 | INFO     | time since job start (4984s) is within the limit (172800.0s)
[2025-10-10 18:34:46] 2025-10-10 16:33:38,704 | INFO     | job 6837354039 has state=finished
[2025-10-10 18:34:46] 2025-10-10 16:33:38,704 | INFO     | preparing for final server update for job 6837354039 in state='finished'
[2025-10-10 18:34:46] 2025-10-10 16:33:38,705 | INFO     | this job has now completed (state=finished)
[2025-10-10 18:34:46] 2025-10-10 16:33:38,705 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 18:34:46] 2025-10-10 16:33:38,705 | INFO     | log transfer has been attempted: DONE
[2025-10-10 18:34:46] 2025-10-10 16:33:38,705 | INFO     | job 6837354039 has finished - writing final server update
[2025-10-10 18:34:46] 2025-10-10 16:33:38,705 | INFO     | total number of processed events: 400 (read)
[2025-10-10 18:34:46] 2025-10-10 16:33:38,706 | INFO     | executing command: lscpu
[2025-10-10 18:34:46] 2025-10-10 16:33:38,722 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 18:34:46] 2025-10-10 16:33:39,983 | INFO     | monitor loop #383: job 0:6837354039 is in state 'finished'
[2025-10-10 18:34:46] 2025-10-10 16:33:39,984 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 18:34:46] 2025-10-10 16:33:40,410 | INFO     | time since job start (4986s) is within the limit (172800.0s)
[2025-10-10 18:34:46] 2025-10-10 16:33:42,415 | INFO     | time since job start (4988s) is within the limit (172800.0s)
[2025-10-10 18:34:46] 2025-10-10 16:33:42,486 | INFO     | monitor loop #384: job 0:6837354039 is in state 'finished'
[2025-10-10 18:34:46] 2025-10-10 16:33:42,486 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 18:34:46] 2025-10-10 16:33:43,906 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 18:34:46] 2025-10-10 16:33:43,907 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3826.7317500000004
[2025-10-10 18:34:46] 2025-10-10 16:33:43,908 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6837354039/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 18:34:46] 2025-10-10 16:33:43,908 | INFO     | extracted standard info from prmon json
[2025-10-10 18:34:46] 2025-10-10 16:33:43,909 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 18:34:46] 2025-10-10 16:33:43,909 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 18:34:46] 2025-10-10 16:33:43,909 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 18:34:46] 2025-10-10 16:33:43,909 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 18:34:46] 2025-10-10 16:33:43,909 | INFO     | fitting pss+swap vs Time
[2025-10-10 18:34:46] 2025-10-10 16:33:43,910 | INFO     | sum of square deviations: 130793150.0
[2025-10-10 18:34:46] 2025-10-10 16:33:43,910 | INFO     | sum of deviations: -2664300232.9999995
[2025-10-10 18:34:46] 2025-10-10 16:33:43,910 | INFO     | mean x: 1760111615.0
[2025-10-10 18:34:46] 2025-10-10 16:33:43,910 | INFO     | mean y: 2366098.7066666665
[2025-10-10 18:34:46] 2025-10-10 16:33:43,910 | INFO     | -- intersect: 35856428684.93925
[2025-10-10 18:34:46] 2025-10-10 16:33:43,910 | INFO     | intersect: 35856428684.93925
[2025-10-10 18:34:46] 2025-10-10 16:33:43,910 | INFO     | chi2: 0.08597009388610284
[2025-10-10 18:34:46] 2025-10-10 16:33:43,910 | INFO     | -- intersect: 35856428684.93925
[2025-10-10 18:34:46] 2025-10-10 16:33:43,910 | INFO     | current memory leak: -20.37 B/s (using 75 data points, chi2=0.09)
[2025-10-10 18:34:46] 2025-10-10 16:33:43,910 | INFO     | could have reported an average CPU frequency of 3953 MHz (6 samples)
[2025-10-10 18:34:46] 2025-10-10 16:33:43,910 | INFO     | ..............................
[2025-10-10 18:34:46] 2025-10-10 16:33:43,910 | INFO     | . Timing measurements:
[2025-10-10 18:34:46] 2025-10-10 16:33:43,910 | INFO     | . get job = 0 s
[2025-10-10 18:34:46] 2025-10-10 16:33:43,910 | INFO     | . initial setup = 1 s
[2025-10-10 18:34:46] 2025-10-10 16:33:43,910 | INFO     | . payload setup = 2 s
[2025-10-10 18:34:46] 2025-10-10 16:33:43,910 | INFO     | . stage-in = 0 s
[2025-10-10 18:34:46] 2025-10-10 16:33:43,910 | INFO     | . payload execution = 4960 s
[2025-10-10 18:34:46] 2025-10-10 16:33:43,910 | INFO     | . stage-out = 0 s
[2025-10-10 18:34:46] 2025-10-10 16:33:43,910 | INFO     | . log creation = 0 s
[2025-10-10 18:34:46] 2025-10-10 16:33:43,910 | INFO     | ..............................
[2025-10-10 18:34:46] 2025-10-10 16:33:44,217 | INFO     | 
[2025-10-10 18:34:46] 2025-10-10 16:33:44,217 | INFO     | job summary report
[2025-10-10 18:34:46] 2025-10-10 16:33:44,217 | INFO     | --------------------------------------------------
[2025-10-10 18:34:46] 2025-10-10 16:33:44,217 | INFO     | PanDA job id: 6837354039
[2025-10-10 18:34:46] 2025-10-10 16:33:44,217 | INFO     | task id: 46676269
[2025-10-10 18:34:46] 2025-10-10 16:33:44,217 | INFO     | errors: (none)
[2025-10-10 18:34:46] 2025-10-10 16:33:44,217 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 18:34:46] 2025-10-10 16:33:44,217 | INFO     | pilot state: finished 
[2025-10-10 18:34:46] 2025-10-10 16:33:44,217 | INFO     | transexitcode: 0
[2025-10-10 18:34:46] 2025-10-10 16:33:44,217 | INFO     | exeerrorcode: 0
[2025-10-10 18:34:46] 2025-10-10 16:33:44,217 | INFO     | exeerrordiag: 
[2025-10-10 18:34:46] 2025-10-10 16:33:44,217 | INFO     | exitcode: 0
[2025-10-10 18:34:46] 2025-10-10 16:33:44,217 | INFO     | exitmsg: OK
[2025-10-10 18:34:46] 2025-10-10 16:33:44,217 | INFO     | cpuconsumptiontime: 14245 s
[2025-10-10 18:34:46] 2025-10-10 16:33:44,217 | INFO     | nevents: 400
[2025-10-10 18:34:46] 2025-10-10 16:33:44,217 | INFO     | neventsw: 0
[2025-10-10 18:34:46] 2025-10-10 16:33:44,218 | INFO     | pid: 3962485
[2025-10-10 18:34:46] 2025-10-10 16:33:44,218 | INFO     | pgrp: 3962485
[2025-10-10 18:34:46] 2025-10-10 16:33:44,218 | INFO     | corecount: 3
[2025-10-10 18:34:46] 2025-10-10 16:33:44,218 | INFO     | event service: False
[2025-10-10 18:34:46] 2025-10-10 16:33:44,218 | INFO     | sizes: {0: 2348687, 1: 2348886, 3: 2349148, 11: 2349176, 4967: 2384611, 4970: 2384611, 4977: 2384933}
[2025-10-10 18:34:46] 2025-10-10 16:33:44,218 | INFO     | --------------------------------------------------
[2025-10-10 18:34:46] 2025-10-10 16:33:44,218 | INFO     | 
[2025-10-10 18:34:46] 2025-10-10 16:33:44,218 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-10 18:34:46] 2025-10-10 16:33:44,232 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 18:34:46] 2025-10-10 16:33:44,232 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 18:34:46] 2025-10-10 16:33:44,232 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 18:34:46] 2025-10-10 16:33:44,232 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 18:34:46] 2025-10-10 16:33:44,232 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 18:34:46] 2025-10-10 16:33:44,232 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 18:34:46] 2025-10-10 16:33:44,232 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 18:34:46] 2025-10-10 16:33:44,232 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 18:34:46] 2025-10-10 16:33:44,232 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 18:34:46] 2025-10-10 16:33:44,232 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 18:34:46] 2025-10-10 16:33:44,232 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 18:34:46] 2025-10-10 16:33:44,232 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 18:34:46] 2025-10-10 16:33:44,232 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 18:34:46] 2025-10-10 16:33:44,232 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 18:34:46] 2025-10-10 16:33:44,233 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 18:34:46] 2025-10-10 16:33:44,233 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 18:34:46] 2025-10-10 16:33:44,233 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 18:34:46] 2025-10-10 16:33:44,233 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 18:34:46] 2025-10-10 16:33:44,233 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 18:34:46] 2025-10-10 16:33:44,233 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 18:34:46] 2025-10-10 16:33:44,233 | INFO     | job 6837354039 has completed (purged errors)
[2025-10-10 18:34:46] 2025-10-10 16:33:44,233 | INFO     | overall cleanup function is called
[2025-10-10 18:34:46] 2025-10-10 16:33:45,239 | INFO     | --- collectZombieJob: --- 10, [3962485]
[2025-10-10 18:34:46] 2025-10-10 16:33:45,240 | INFO     | zombie collector waiting for pid 3962485
[2025-10-10 18:34:46] 2025-10-10 16:33:45,240 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 18:34:46] 2025-10-10 16:33:45,240 | INFO     | collected zombie processes
[2025-10-10 18:34:46] 2025-10-10 16:33:45,240 | INFO     | will attempt to kill all subprocesses of pid=3962485
[2025-10-10 18:34:46] 2025-10-10 16:33:45,282 | INFO     | process IDs to be killed: [3962485] (in reverse order)
[2025-10-10 18:34:46] 2025-10-10 16:33:45,305 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 18:34:46] 2025-10-10 16:33:45,306 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 18:34:46] 2025-10-10 16:33:45,307 | INFO     | did not find any defunct processes belonging to 3962485
[2025-10-10 18:34:46] 2025-10-10 16:33:45,308 | INFO     | did not find any defunct processes belonging to 3962485
[2025-10-10 18:34:46] 2025-10-10 16:33:45,308 | INFO     | ready for new job
[2025-10-10 18:34:46] 2025-10-10 16:33:45,308 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 18:34:46] 2025-10-10 16:33:45,309 | INFO     | ***************************************
[2025-10-10 18:34:46] 2025-10-10 16:33:45,309 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 18:34:46] 2025-10-10 16:33:45,309 | INFO     | ***************************************
[2025-10-10 18:34:46] 2025-10-10 16:33:45,309 | INFO     | 
[2025-10-10 18:34:46] 2025-10-10 16:33:45,309 | INFO     | architecture information:
[2025-10-10 18:34:46] 2025-10-10 16:33:45,309 | INFO     | executing command: cat /etc/os-release
[2025-10-10 18:34:46] 2025-10-10 16:33:45,317 | INFO     | cat /etc/os-release:
[2025-10-10 18:34:46] NAME="CentOS Linux"
[2025-10-10 18:34:46] VERSION="7 (Core)"
[2025-10-10 18:34:46] ID="centos"
[2025-10-10 18:34:46] ID_LIKE="rhel fedora"
[2025-10-10 18:34:46] VERSION_ID="7"
[2025-10-10 18:34:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 18:34:46] ANSI_COLOR="0;31"
[2025-10-10 18:34:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 18:34:46] HOME_URL="https://www.centos.org/"
[2025-10-10 18:34:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 18:34:46] 
[2025-10-10 18:34:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 18:34:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 18:34:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 18:34:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 18:34:46] 
[2025-10-10 18:34:46] 2025-10-10 16:33:45,317 | INFO     | ***************************************
[2025-10-10 18:34:46] 2025-10-10 16:33:45,821 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-10 18:34:46] 2025-10-10 16:33:45,833 | INFO     | sufficient remaining disk space (272672751616 B)
[2025-10-10 18:34:46] 2025-10-10 16:33:45,833 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 18:34:46] 2025-10-10 16:33:45,833 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 18:34:46] 2025-10-10 16:33:45,833 | INFO     | update_server=False
[2025-10-10 18:34:46] 2025-10-10 16:33:45,833 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 18:34:46] 2025-10-10 16:33:45,833 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 18:34:46] 2025-10-10 16:33:45,902 | INFO     | all job control threads have been joined
[2025-10-10 18:34:46] 2025-10-10 16:33:45,995 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 18:34:46] 2025-10-10 16:33:45,995 | INFO     | aborting loop
[2025-10-10 18:34:46] 2025-10-10 16:33:46,500 | INFO     | all payload control threads have been joined
[2025-10-10 18:34:46] 2025-10-10 16:33:46,509 | INFO     | all data control threads have been joined
[2025-10-10 18:34:46] 2025-10-10 16:33:46,693 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 18:34:46] 2025-10-10 16:33:46,824 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 18:34:46] 2025-10-10 16:33:46,839 | INFO     | [job] queue monitor thread has finished
[2025-10-10 18:34:46] 2025-10-10 16:33:46,839 | INFO     | [job] retrieve thread has finished
[2025-10-10 18:34:46] 2025-10-10 16:33:46,862 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 18:34:46] 2025-10-10 16:33:46,862 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 18:34:46] 2025-10-10 16:33:46,908 | INFO     | [job] control thread has finished
[2025-10-10 18:34:46] 2025-10-10 16:33:47,001 | INFO     | [job] job monitor thread has finished
[2025-10-10 18:34:46] 2025-10-10 16:33:47,214 | INFO     | [payload] validate_post thread has finished
[2025-10-10 18:34:46] 2025-10-10 16:33:47,506 | INFO     | [payload] control thread has finished
[2025-10-10 18:34:46] 2025-10-10 16:33:47,515 | INFO     | [data] control thread has finished
[2025-10-10 18:34:46] 2025-10-10 16:33:47,726 | INFO     | [data] copytool_in thread has finished
[2025-10-10 18:34:46] 2025-10-10 16:33:47,779 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 18:34:46] 2025-10-10 16:33:48,275 | INFO     | [payload] failed_post thread has finished
[2025-10-10 18:34:46] 2025-10-10 16:33:48,333 | INFO     | [job] validate thread has finished
[2025-10-10 18:34:46] 2025-10-10 16:33:48,700 | INFO     | [data] copytool_out thread has finished
[2025-10-10 18:34:46] 2025-10-10 16:33:50,831 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 18:34:46] 2025-10-10 16:33:56,837 | INFO     | job.realtimelogging is not enabled
[2025-10-10 18:34:46] 2025-10-10 16:33:57,843 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 18:34:46] 2025-10-10 16:34:15,537 | INFO     | PID=3956051 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 18:34:46] 2025-10-10 16:34:15,538 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 18:34:46] 2025-10-10 16:34:15,538 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 18:34:46] 2025-10-10 16:34:15,538 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 18:34:46] 2025-10-10 16:34:39,511 | INFO     | [monitor] cgroup control has ended
[2025-10-10 18:34:46] 2025-10-10 16:34:41,173 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140152691590976)>', '<ExcThread(monitor, started 140151762188032)>']
[2025-10-10 18:34:46] 2025-10-10 16:34:41,672 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 18:34:46] 2025-10-10 16:34:41,672 | INFO     | [monitor] control thread has ended
[2025-10-10 18:34:46] 2025-10-10 16:34:46,197 | INFO     | all workflow threads have been joined
[2025-10-10 18:34:46] 2025-10-10 16:34:46,197 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 18:34:46] 2025-10-10 16:34:46,198 | INFO     | traces error code: 0
[2025-10-10 18:34:46] 2025-10-10 16:34:46,198 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 18:34:46] 2025-10-10 16:34:46,246 [wrapper] ==== pilot stdout END ====
[2025-10-10 18:34:46] 2025-10-10 16:34:46,248 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 18:34:46] 2025-10-10 16:34:46,250 [wrapper] pilotpid: 3956051
[2025-10-10 18:34:46] 2025-10-10 16:34:46,253 [wrapper] Pilot exit status: 0
[2025-10-10 18:34:46] 2025-10-10 16:34:46,259 [wrapper] pandaids: 6837354039
[2025-10-10 18:34:46] 2025-10-10 16:34:46,276 [wrapper] cleanup supervisor_pilot 3974243 3956052
[2025-10-10 18:34:46] 2025-10-10 16:34:46,278 [wrapper] Test setup, not cleaning
[2025-10-10 18:34:46] 2025-10-10 16:34:46,281 [wrapper] apfmon messages muted
[2025-10-10 18:34:46] 2025-10-10 16:34:46,283 [wrapper] ==== wrapper stdout END ====
[2025-10-10 18:34:46] 2025-10-10 16:34:46,285 [wrapper] ==== wrapper stderr END ====
[2025-10-10 18:34:46]  *** Error codes and diagnostics ***
[2025-10-10 18:34:46]     "exeErrorCode": 0,
[2025-10-10 18:34:46]     "exeErrorDiag": "",
[2025-10-10 18:34:46]     "pilotErrorCode": 0,
[2025-10-10 18:34:46]     "pilotErrorDiag": "",
[2025-10-10 18:34:46]  *** Listing of results directory ***
[2025-10-10 18:34:46] total 420248
[2025-10-10 18:34:46] -rw-r--r-- 1 boinc boinc    557409 Oct  9 19:04 pilot3.tar.gz
[2025-10-10 18:34:46] -rwx------ 1 boinc boinc     36292 Oct  9 19:07 runpilot2-wrapper.sh
[2025-10-10 18:34:46] -rw-r--r-- 1 boinc boinc      5112 Oct  9 19:07 queuedata.json
[2025-10-10 18:34:46] -rw-r--r-- 1 boinc boinc       100 Oct 10 17:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 18:34:46] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 17:10 run_atlas
[2025-10-10 18:34:46] -rw-r--r-- 1 boinc boinc       105 Oct 10 17:10 job.xml
[2025-10-10 18:34:46] -rw-r--r-- 2 boinc boinc 221819648 Oct 10 17:10 EVNT.46676267._000947.pool.root.1
[2025-10-10 18:34:46] drwxrwx--x 2 boinc boinc      4096 Oct 10 17:10 shared
[2025-10-10 18:34:46] -rw-r--r-- 2 boinc boinc    569676 Oct 10 17:10 input.tar.gz
[2025-10-10 18:34:46] -rw-r--r-- 2 boinc boinc     15120 Oct 10 17:10 start_atlas.sh
[2025-10-10 18:34:46] -rw-r--r-- 1 boinc boinc         0 Oct 10 17:10 boinc_setup_complete
[2025-10-10 18:34:46] -rw-r--r-- 1 boinc boinc      6447 Oct 10 17:10 init_data.xml
[2025-10-10 18:34:46] -rw-r--r-- 1 boinc boinc         0 Oct 10 17:10 boinc_lockfile
[2025-10-10 18:34:46] -rw-r--r-- 1 boinc boinc      2549 Oct 10 17:10 pandaJob.out
[2025-10-10 18:34:46] -rw------- 1 boinc boinc    975533 Oct 10 17:10 agis_schedconf.cvmfs.json
[2025-10-10 18:34:46] -rw------- 1 boinc boinc   1560580 Oct 10 17:10 agis_ddmendpoints.agis.ALL.json
[2025-10-10 18:34:46] drwx------ 5 boinc boinc      4096 Oct 10 17:10 pilot3
[2025-10-10 18:34:46] -rw------- 1 boinc boinc 202637660 Oct 10 18:33 HITS.46676269._023063.pool.root.1
[2025-10-10 18:34:46] -rw-r--r-- 1 boinc boinc       529 Oct 10 18:33 boinc_task_state.xml
[2025-10-10 18:34:46] -rw------- 1 boinc boinc      1018 Oct 10 18:33 memory_monitor_summary.json
[2025-10-10 18:34:46] -rw------- 1 boinc boinc    251619 Oct 10 18:33 log.46676269._023063.job.log.tgz.1
[2025-10-10 18:34:46] -rw------- 1 boinc boinc      7746 Oct 10 18:33 heartbeat.json
[2025-10-10 18:34:46] -rw------- 1 boinc boinc        95 Oct 10 18:34 pilot_heartbeat.json
[2025-10-10 18:34:46] -rw-r--r-- 1 boinc boinc      8192 Oct 10 18:34 boinc_mmap_file
[2025-10-10 18:34:46] -rw-r--r-- 1 boinc boinc        27 Oct 10 18:34 wrapper_checkpoint.txt
[2025-10-10 18:34:46] -rw------- 1 boinc boinc      4824 Oct 10 18:34 pilotlog.txt
[2025-10-10 18:34:46] -rw------- 1 boinc boinc    732806 Oct 10 18:34 log.46676269._023063.job.log.1
[2025-10-10 18:34:46] -rw------- 1 boinc boinc       357 Oct 10 18:34 output.list
[2025-10-10 18:34:46] -rw-r--r-- 1 boinc boinc       620 Oct 10 18:34 runtime_log
[2025-10-10 18:34:46] -rw------- 1 boinc boinc   1003520 Oct 10 18:34 result.tar.gz
[2025-10-10 18:34:46] -rw-r--r-- 1 boinc boinc      8777 Oct 10 18:34 runtime_log.err
[2025-10-10 18:34:46] -rw------- 1 boinc boinc       658 Oct 10 18:34 Pw6NDmxH9Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmSNOMDmjChaQn.diag
[2025-10-10 18:34:46] -rw-r--r-- 1 boinc boinc     22097 Oct 10 18:34 stderr.txt
[2025-10-10 18:34:46] HITS file was successfully produced:
[2025-10-10 18:34:46] -rw------- 1 boinc boinc 202637660 Oct 10 18:33 shared/HITS.pool.root.1
[2025-10-10 18:34:46]  *** Contents of shared directory: ***
[2025-10-10 18:34:46] total 416080
[2025-10-10 18:34:46] -rw-r--r-- 2 boinc boinc 221819648 Oct 10 17:10 ATLAS.root_0
[2025-10-10 18:34:46] -rw-r--r-- 2 boinc boinc    569676 Oct 10 17:10 input.tar.gz
[2025-10-10 18:34:46] -rw-r--r-- 2 boinc boinc     15120 Oct 10 17:10 start_atlas.sh
[2025-10-10 18:34:46] -rw------- 1 boinc boinc 202637660 Oct 10 18:33 HITS.pool.root.1
[2025-10-10 18:34:46] -rw------- 1 boinc boinc   1003520 Oct 10 18:34 result.tar.gz
18:34:48 (3952331): run_atlas exited; CPU time 14263.673711
18:34:48 (3952331): called boinc_finish(0)

</stderr_txt>
]]>

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