Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
03:33:49 (432952): wrapper (7.7.26015): starting
03:33:49 (432952): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 03:33:49] Arguments: --nthreads 12
[2025-10-10 03:33:49] Threads: 12
[2025-10-10 03:33:49] Checking for CVMFS
[2025-10-10 03:33:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 03:33:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 03:33:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 03:33:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 03:33:49] 2.13.2.0 409556 32 45424 151529 3 57 2345148 4096001 0 130560 0 61517 99.972 4087 448 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-10 03:33:49] CVMFS is ok
[2025-10-10 03:33:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 03:33:49] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-10 03:33:49] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-10 03:33:49] Further information can be found at the LHC@home message board.
[2025-10-10 03:33:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 03:33:49] Checking for apptainer binary...
[2025-10-10 03:33:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 03:33:49] Running /usr/bin/apptainer --version
[2025-10-10 03:33:49] apptainer version 1.4.2
[2025-10-10 03:33:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 03:33:49] matisse
[2025-10-10 03:33:49] apptainer works
[2025-10-10 03:33:49] Set ATHENA_PROC_NUMBER=12
[2025-10-10 03:33:49] Set ATHENA_CORE_NUMBER=12
[2025-10-10 03:33:49] Starting ATLAS job with PandaID=6837353560
[2025-10-10 03:33:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 04:07:03]  *** The last 200 lines of the pilot log: ***
[2025-10-10 04:07:03]  lfn=log.46676269._022627.job.log.tgz.1
[2025-10-10 04:07:03]  mtime=0
[2025-10-10 04:07:03]  protocol_id=None
[2025-10-10 04:07:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-10 04:07:03]  replicas=None
[2025-10-10 04:07:03]  scope=mc23_13p6TeV
[2025-10-10 04:07:03]  status=None
[2025-10-10 04:07:03]  status_code=0
[2025-10-10 04:07:03]  storage_token=
[2025-10-10 04:07:03]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6837353560/log.46676269._022627.job.log.tgz.1
[2025-10-10 04:07:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4c/82/log.46676269._022627.job.log.tgz.1
[2025-10-10 04:07:03]  workdir=None
[2025-10-10 04:07:03] ]
[2025-10-10 04:07:03] 2025-10-10 02:05:52,789 | INFO     | transferring file log.46676269._022627.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6837353560/log.46676269._022627.job.log.tgz.1 to /var/lib/boinc
[2025-10-10 04:07:03] 2025-10-10 02:05:52,789 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6837353560/log.46676269._022627.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.466762
[2025-10-10 04:07:03] 2025-10-10 02:05:52,799 | INFO     | adding to output.list: log.46676269._022627.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4c/82/log.46676269._022627.job.log.tg
[2025-10-10 04:07:03] 2025-10-10 02:05:52,800 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 04:07:03] 2025-10-10 02:05:52,800 | INFO     | summary of transferred files:
[2025-10-10 04:07:03] 2025-10-10 02:05:52,800 | INFO     |  -- lfn=log.46676269._022627.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 04:07:03] 2025-10-10 02:05:52,800 | INFO     | stage-out finished correctly
[2025-10-10 04:07:03] 2025-10-10 02:05:53,342 | INFO     | time since job start (1919s) is within the limit (172800.0s)
[2025-10-10 04:07:03] 2025-10-10 02:05:54,852 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 04:07:03] 2025-10-10 02:05:55,341 | INFO     | job 6837353560 has state=finished
[2025-10-10 04:07:03] 2025-10-10 02:05:55,341 | INFO     | preparing for final server update for job 6837353560 in state='finished'
[2025-10-10 04:07:03] 2025-10-10 02:05:55,342 | INFO     | this job has now completed (state=finished)
[2025-10-10 04:07:03] 2025-10-10 02:05:55,342 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 04:07:03] 2025-10-10 02:05:55,342 | INFO     | log transfer has been attempted: DONE
[2025-10-10 04:07:03] 2025-10-10 02:05:55,342 | INFO     | job 6837353560 has finished - writing final server update
[2025-10-10 04:07:03] 2025-10-10 02:05:55,342 | INFO     | total number of processed events: 400 (read)
[2025-10-10 04:07:03] 2025-10-10 02:05:55,342 | INFO     | executing command: lscpu
[2025-10-10 04:07:03] 2025-10-10 02:05:55,347 | INFO     | time since job start (1921s) is within the limit (172800.0s)
[2025-10-10 04:07:03] 2025-10-10 02:05:55,356 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 04:07:03] 2025-10-10 02:05:57,093 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 04:07:03] 2025-10-10 02:05:57,094 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3342.54025
[2025-10-10 04:07:03] 2025-10-10 02:05:57,095 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6837353560/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 04:07:03] 2025-10-10 02:05:57,096 | INFO     | extracted standard info from prmon json
[2025-10-10 04:07:03] 2025-10-10 02:05:57,096 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 04:07:03] 2025-10-10 02:05:57,096 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 04:07:03] 2025-10-10 02:05:57,096 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 04:07:03] 2025-10-10 02:05:57,096 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 04:07:03] 2025-10-10 02:05:57,096 | INFO     | fitting pss+swap vs Time
[2025-10-10 04:07:03] 2025-10-10 02:05:57,097 | INFO     | sum of square deviations: 4837300.0
[2025-10-10 04:07:03] 2025-10-10 02:05:57,097 | INFO     | sum of deviations: 125418867.0
[2025-10-10 04:07:03] 2025-10-10 02:05:57,097 | INFO     | mean x: 1760061089.0
[2025-10-10 04:07:03] 2025-10-10 02:05:57,097 | INFO     | mean y: 3137081.56
[2025-10-10 04:07:03] 2025-10-10 02:05:57,097 | INFO     | -- intersect: -45630763572.35152
[2025-10-10 04:07:03] 2025-10-10 02:05:57,097 | INFO     | intersect: -45630763572.35152
[2025-10-10 04:07:03] 2025-10-10 02:05:57,097 | INFO     | chi2: 7.648012774153215e-05
[2025-10-10 04:07:03] 2025-10-10 02:05:57,097 | INFO     | -- intersect: -45630763572.35152
[2025-10-10 04:07:03] 2025-10-10 02:05:57,097 | INFO     | current memory leak: 25.93 B/s (using 25 data points, chi2=0.00)
[2025-10-10 04:07:03] 2025-10-10 02:05:57,097 | INFO     | could have reported an average CPU frequency of 3621 MHz (5 samples)
[2025-10-10 04:07:03] 2025-10-10 02:05:57,097 | INFO     | ..............................
[2025-10-10 04:07:03] 2025-10-10 02:05:57,097 | INFO     | . Timing measurements:
[2025-10-10 04:07:03] 2025-10-10 02:05:57,097 | INFO     | . get job = 0 s
[2025-10-10 04:07:03] 2025-10-10 02:05:57,097 | INFO     | . initial setup = 1 s
[2025-10-10 04:07:03] 2025-10-10 02:05:57,097 | INFO     | . payload setup = 2 s
[2025-10-10 04:07:03] 2025-10-10 02:05:57,097 | INFO     | . stage-in = 0 s
[2025-10-10 04:07:03] 2025-10-10 02:05:57,097 | INFO     | . payload execution = 1899 s
[2025-10-10 04:07:03] 2025-10-10 02:05:57,097 | INFO     | . stage-out = 0 s
[2025-10-10 04:07:03] 2025-10-10 02:05:57,097 | INFO     | . log creation = 0 s
[2025-10-10 04:07:03] 2025-10-10 02:05:57,097 | INFO     | ..............................
[2025-10-10 04:07:03] 2025-10-10 02:05:57,131 | INFO     | 
[2025-10-10 04:07:03] 2025-10-10 02:05:57,131 | INFO     | job summary report
[2025-10-10 04:07:03] 2025-10-10 02:05:57,131 | INFO     | --------------------------------------------------
[2025-10-10 04:07:03] 2025-10-10 02:05:57,131 | INFO     | PanDA job id: 6837353560
[2025-10-10 04:07:03] 2025-10-10 02:05:57,131 | INFO     | task id: 46676269
[2025-10-10 04:07:03] 2025-10-10 02:05:57,131 | INFO     | errors: (none)
[2025-10-10 04:07:03] 2025-10-10 02:05:57,131 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 04:07:03] 2025-10-10 02:05:57,131 | INFO     | pilot state: finished 
[2025-10-10 04:07:03] 2025-10-10 02:05:57,131 | INFO     | transexitcode: 0
[2025-10-10 04:07:03] 2025-10-10 02:05:57,131 | INFO     | exeerrorcode: 0
[2025-10-10 04:07:03] 2025-10-10 02:05:57,131 | INFO     | exeerrordiag: 
[2025-10-10 04:07:03] 2025-10-10 02:05:57,131 | INFO     | exitcode: 0
[2025-10-10 04:07:03] 2025-10-10 02:05:57,131 | INFO     | exitmsg: OK
[2025-10-10 04:07:03] 2025-10-10 02:05:57,131 | INFO     | cpuconsumptiontime: 21087 s
[2025-10-10 04:07:03] 2025-10-10 02:05:57,131 | INFO     | nevents: 400
[2025-10-10 04:07:03] 2025-10-10 02:05:57,131 | INFO     | neventsw: 0
[2025-10-10 04:07:03] 2025-10-10 02:05:57,131 | INFO     | pid: 443269
[2025-10-10 04:07:03] 2025-10-10 02:05:57,131 | INFO     | pgrp: 443269
[2025-10-10 04:07:03] 2025-10-10 02:05:57,131 | INFO     | corecount: 12
[2025-10-10 04:07:03] 2025-10-10 02:05:57,131 | INFO     | event service: False
[2025-10-10 04:07:03] 2025-10-10 02:05:57,131 | INFO     | sizes: {0: 2348862, 2: 2349124, 11: 2349152, 1904: 2374143, 1905: 2383155, 1907: 2383211, 1910: 2383565}
[2025-10-10 04:07:03] 2025-10-10 02:05:57,131 | INFO     | --------------------------------------------------
[2025-10-10 04:07:03] 2025-10-10 02:05:57,131 | INFO     | 
[2025-10-10 04:07:03] 2025-10-10 02:05:57,131 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-10 04:07:03] 2025-10-10 02:05:57,142 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 04:07:03] 2025-10-10 02:05:57,142 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 04:07:03] 2025-10-10 02:05:57,142 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 04:07:03] 2025-10-10 02:05:57,142 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 04:07:03] 2025-10-10 02:05:57,142 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 04:07:03] 2025-10-10 02:05:57,142 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 04:07:03] 2025-10-10 02:05:57,142 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 04:07:03] 2025-10-10 02:05:57,142 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 04:07:03] 2025-10-10 02:05:57,142 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 04:07:03] 2025-10-10 02:05:57,142 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 04:07:03] 2025-10-10 02:05:57,142 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 04:07:03] 2025-10-10 02:05:57,142 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 04:07:03] 2025-10-10 02:05:57,142 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 04:07:03] 2025-10-10 02:05:57,142 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 04:07:03] 2025-10-10 02:05:57,142 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 04:07:03] 2025-10-10 02:05:57,142 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 04:07:03] 2025-10-10 02:05:57,143 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 04:07:03] 2025-10-10 02:05:57,143 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 04:07:03] 2025-10-10 02:05:57,143 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 04:07:03] 2025-10-10 02:05:57,143 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 04:07:03] 2025-10-10 02:05:57,143 | INFO     | job 6837353560 has completed (purged errors)
[2025-10-10 04:07:03] 2025-10-10 02:05:57,143 | INFO     | overall cleanup function is called
[2025-10-10 04:07:03] 2025-10-10 02:05:57,458 | WARNING  | process 443269 can no longer be monitored (due to stat problems) - aborting
[2025-10-10 04:07:03] 2025-10-10 02:05:57,511 | INFO     | using path: /var/lib/boinc-client/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 04:07:03] 2025-10-10 02:05:57,571 | INFO     | number of running child processes to parent process 443269: 1
[2025-10-10 04:07:03] 2025-10-10 02:05:57,571 | INFO     | maximum number of monitored processes: 6
[2025-10-10 04:07:03] 2025-10-10 02:05:57,571 | INFO     | aborting job monitoring since job object (job id=6837353560) has expired
[2025-10-10 04:07:03] 2025-10-10 02:05:58,149 | INFO     | --- collectZombieJob: --- 10, [443269]
[2025-10-10 04:07:03] 2025-10-10 02:05:58,149 | INFO     | zombie collector waiting for pid 443269
[2025-10-10 04:07:03] 2025-10-10 02:05:58,150 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 04:07:03] 2025-10-10 02:05:58,150 | INFO     | collected zombie processes
[2025-10-10 04:07:03] 2025-10-10 02:05:58,150 | INFO     | will attempt to kill all subprocesses of pid=443269
[2025-10-10 04:07:03] 2025-10-10 02:05:58,211 | INFO     | process IDs to be killed: [443269] (in reverse order)
[2025-10-10 04:07:03] 2025-10-10 02:05:58,237 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 04:07:03] 2025-10-10 02:05:58,237 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 04:07:03] 2025-10-10 02:05:58,239 | INFO     | did not find any defunct processes belonging to 443269
[2025-10-10 04:07:03] 2025-10-10 02:05:58,241 | INFO     | did not find any defunct processes belonging to 443269
[2025-10-10 04:07:03] 2025-10-10 02:05:58,241 | INFO     | ready for new job
[2025-10-10 04:07:03] 2025-10-10 02:05:58,241 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 04:07:03] 2025-10-10 02:05:58,242 | INFO     | ***************************************
[2025-10-10 04:07:03] 2025-10-10 02:05:58,242 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 04:07:03] 2025-10-10 02:05:58,242 | INFO     | ***************************************
[2025-10-10 04:07:03] 2025-10-10 02:05:58,242 | INFO     | 
[2025-10-10 04:07:03] 2025-10-10 02:05:58,242 | INFO     | architecture information:
[2025-10-10 04:07:03] 2025-10-10 02:05:58,242 | INFO     | executing command: cat /etc/os-release
[2025-10-10 04:07:03] 2025-10-10 02:05:58,250 | INFO     | cat /etc/os-release:
[2025-10-10 04:07:03] NAME="CentOS Linux"
[2025-10-10 04:07:03] VERSION="7 (Core)"
[2025-10-10 04:07:03] ID="centos"
[2025-10-10 04:07:03] ID_LIKE="rhel fedora"
[2025-10-10 04:07:03] VERSION_ID="7"
[2025-10-10 04:07:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 04:07:03] ANSI_COLOR="0;31"
[2025-10-10 04:07:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 04:07:03] HOME_URL="https://www.centos.org/"
[2025-10-10 04:07:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 04:07:03] 
[2025-10-10 04:07:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 04:07:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 04:07:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 04:07:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 04:07:03] 
[2025-10-10 04:07:03] 2025-10-10 02:05:58,250 | INFO     | ***************************************
[2025-10-10 04:07:03] 2025-10-10 02:05:58,753 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-10 04:07:03] 2025-10-10 02:05:58,762 | INFO     | sufficient remaining disk space (532778319872 B)
[2025-10-10 04:07:03] 2025-10-10 02:05:58,762 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 04:07:03] 2025-10-10 02:05:58,762 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 04:07:03] 2025-10-10 02:05:58,762 | INFO     | update_server=False
[2025-10-10 04:07:03] 2025-10-10 02:05:58,762 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 04:07:03] 2025-10-10 02:05:58,762 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 04:07:03] 2025-10-10 02:05:58,762 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 04:07:03] 2025-10-10 02:05:58,762 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 04:07:03] 2025-10-10 02:05:58,762 | INFO     | aborting loop
[2025-10-10 04:07:03] 2025-10-10 02:05:58,797 | INFO     | all data control threads have been joined
[2025-10-10 04:07:03] 2025-10-10 02:05:59,086 | INFO     | all job control threads have been joined
[2025-10-10 04:07:03] 2025-10-10 02:05:59,767 | INFO     | [job] retrieve thread has finished
[2025-10-10 04:07:03] 2025-10-10 02:05:59,767 | INFO     | [job] queue monitor thread has finished
[2025-10-10 04:07:03] 2025-10-10 02:05:59,767 | INFO     | [job] job monitor thread has finished
[2025-10-10 04:07:03] 2025-10-10 02:05:59,773 | INFO     | all payload control threads have been joined
[2025-10-10 04:07:03] 2025-10-10 02:05:59,802 | INFO     | [data] control thread has finished
[2025-10-10 04:07:03] 2025-10-10 02:06:00,091 | INFO     | [job] control thread has finished
[2025-10-10 04:07:03] 2025-10-10 02:06:00,123 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 04:07:03] 2025-10-10 02:06:00,230 | INFO     | [job] validate thread has finished
[2025-10-10 04:07:03] 2025-10-10 02:06:00,244 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 04:07:03] 2025-10-10 02:06:00,329 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 04:07:03] 2025-10-10 02:06:00,412 | INFO     | [payload] failed_post thread has finished
[2025-10-10 04:07:03] 2025-10-10 02:06:00,591 | INFO     | [data] copytool_in thread has finished
[2025-10-10 04:07:03] 2025-10-10 02:06:00,591 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 04:07:03] 2025-10-10 02:06:00,767 | INFO     | [data] copytool_out thread has finished
[2025-10-10 04:07:03] 2025-10-10 02:06:00,778 | INFO     | [payload] control thread has finished
[2025-10-10 04:07:03] 2025-10-10 02:06:00,888 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 04:07:03] 2025-10-10 02:06:00,946 | INFO     | [payload] validate_post thread has finished
[2025-10-10 04:07:03] 2025-10-10 02:06:04,893 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 04:07:03] 2025-10-10 02:06:28,486 | INFO     | PID=436740 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 04:07:03] 2025-10-10 02:06:28,487 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 04:07:03] 2025-10-10 02:06:28,487 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 04:07:03] 2025-10-10 02:06:28,487 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 04:07:03] 2025-10-10 02:06:57,199 | INFO     | [monitor] cgroup control has ended
[2025-10-10 04:07:03] 2025-10-10 02:06:58,364 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127590456432448)>', '<ExcThread(monitor, started 127589981087488)>']
[2025-10-10 04:07:03] 2025-10-10 02:06:58,624 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 04:07:03] 2025-10-10 02:06:58,624 | INFO     | [monitor] control thread has ended
[2025-10-10 04:07:03] 2025-10-10 02:07:03,390 | INFO     | all workflow threads have been joined
[2025-10-10 04:07:03] 2025-10-10 02:07:03,390 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 04:07:03] 2025-10-10 02:07:03,390 | INFO     | traces error code: 0
[2025-10-10 04:07:03] 2025-10-10 02:07:03,390 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 04:07:03] 2025-10-10 02:07:03,432 [wrapper] ==== pilot stdout END ====
[2025-10-10 04:07:03] 2025-10-10 02:07:03,433 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 04:07:03] 2025-10-10 02:07:03,434 [wrapper] pilotpid: 436740
[2025-10-10 04:07:03] 2025-10-10 02:07:03,436 [wrapper] Pilot exit status: 0
[2025-10-10 04:07:03] 2025-10-10 02:07:03,441 [wrapper] pandaids: 6837353560
[2025-10-10 04:07:03] 2025-10-10 02:07:03,459 [wrapper] cleanup supervisor_pilot  453563 436741
[2025-10-10 04:07:03] 2025-10-10 02:07:03,460 [wrapper] Test setup, not cleaning
[2025-10-10 04:07:03] 2025-10-10 02:07:03,461 [wrapper] apfmon messages muted
[2025-10-10 04:07:03] 2025-10-10 02:07:03,463 [wrapper] ==== wrapper stdout END ====
[2025-10-10 04:07:03] 2025-10-10 02:07:03,464 [wrapper] ==== wrapper stderr END ====
[2025-10-10 04:07:03]  *** Error codes and diagnostics ***
[2025-10-10 04:07:03]     "exeErrorCode": 0,
[2025-10-10 04:07:03]     "exeErrorDiag": "",
[2025-10-10 04:07:03]     "pilotErrorCode": 0,
[2025-10-10 04:07:03]     "pilotErrorDiag": "",
[2025-10-10 04:07:03]  *** Listing of results directory ***
[2025-10-10 04:07:03] total 414244
[2025-10-10 04:07:03] -rw-r--r-- 1 boinc boinc      5112 Okt  9 18:40 queuedata.json
[2025-10-10 04:07:03] -rw-r--r-- 1 boinc boinc    557409 Okt  9 18:40 pilot3.tar.gz
[2025-10-10 04:07:03] -rwx------ 1 boinc boinc     36292 Okt  9 18:41 runpilot2-wrapper.sh
[2025-10-10 04:07:03] -rw-r--r-- 1 boinc boinc       100 Okt 10 03:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 04:07:03] -rwxr-xr-x 1 boinc boinc      7986 Okt 10 03:33 run_atlas
[2025-10-10 04:07:03] -rw-r--r-- 1 boinc boinc       105 Okt 10 03:33 job.xml
[2025-10-10 04:07:03] -rw-r--r-- 2 boinc boinc 221841891 Okt 10 03:33 EVNT.46676267._000929.pool.root.1
[2025-10-10 04:07:03] drwxrwx--x 2 boinc boinc      4096 Okt 10 03:33 shared
[2025-10-10 04:07:03] -rw-r--r-- 2 boinc boinc    569681 Okt 10 03:33 input.tar.gz
[2025-10-10 04:07:03] -rw-r--r-- 2 boinc boinc     15120 Okt 10 03:33 start_atlas.sh
[2025-10-10 04:07:03] -rw-r--r-- 1 boinc boinc         0 Okt 10 03:33 boinc_setup_complete
[2025-10-10 04:07:03] -rw-r--r-- 1 boinc boinc      9677 Okt 10 03:33 init_data.xml
[2025-10-10 04:07:03] -rw-r--r-- 1 boinc boinc         0 Okt 10 03:33 boinc_lockfile
[2025-10-10 04:07:03] -rw-r--r-- 1 boinc boinc      2549 Okt 10 03:33 pandaJob.out
[2025-10-10 04:07:03] -rw------- 1 boinc boinc    975454 Okt 10 03:33 agis_schedconf.cvmfs.json
[2025-10-10 04:07:03] -rw------- 1 boinc boinc   1560580 Okt 10 03:33 agis_ddmendpoints.agis.ALL.json
[2025-10-10 04:07:03] drwx------ 5 boinc boinc      4096 Okt 10 03:33 pilot3
[2025-10-10 04:07:03] -rw------- 1 boinc boinc 197075535 Okt 10 04:05 HITS.46676269._022627.pool.root.1
[2025-10-10 04:07:03] -rw------- 1 boinc boinc      1033 Okt 10 04:05 memory_monitor_summary.json
[2025-10-10 04:07:03] -rw------- 1 boinc boinc    361231 Okt 10 04:05 log.46676269._022627.job.log.tgz.1
[2025-10-10 04:07:03] -rw-r--r-- 1 boinc boinc       529 Okt 10 04:05 boinc_task_state.xml
[2025-10-10 04:07:03] -rw------- 1 boinc boinc      7761 Okt 10 04:05 heartbeat.json
[2025-10-10 04:07:03] -rw------- 1 boinc boinc        95 Okt 10 04:06 pilot_heartbeat.json
[2025-10-10 04:07:03] -rw-r--r-- 1 boinc boinc      8192 Okt 10 04:06 boinc_mmap_file
[2025-10-10 04:07:03] -rw-r--r-- 1 boinc boinc        27 Okt 10 04:06 wrapper_checkpoint.txt
[2025-10-10 04:07:03] -rw------- 1 boinc boinc      4755 Okt 10 04:07 pilotlog.txt
[2025-10-10 04:07:03] -rw------- 1 boinc boinc    315636 Okt 10 04:07 log.46676269._022627.job.log.1
[2025-10-10 04:07:03] -rw------- 1 boinc boinc       357 Okt 10 04:07 output.list
[2025-10-10 04:07:03] -rw-r--r-- 1 boinc boinc       620 Okt 10 04:07 runtime_log
[2025-10-10 04:07:03] -rw------- 1 boinc boinc    696320 Okt 10 04:07 result.tar.gz
[2025-10-10 04:07:03] -rw------- 1 boinc boinc       650 Okt 10 04:07 UOHLDmGt8Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9naNDmtvTGmm.diag
[2025-10-10 04:07:03] -rw-r--r-- 1 boinc boinc      8766 Okt 10 04:07 runtime_log.err
[2025-10-10 04:07:03] -rw-r--r-- 1 boinc boinc     21700 Okt 10 04:07 stderr.txt
[2025-10-10 04:07:03] HITS file was successfully produced:
[2025-10-10 04:07:03] -rw------- 1 boinc boinc 197075535 Okt 10 04:05 shared/HITS.pool.root.1
[2025-10-10 04:07:03]  *** Contents of shared directory: ***
[2025-10-10 04:07:03] total 410368
[2025-10-10 04:07:03] -rw-r--r-- 2 boinc boinc 221841891 Okt 10 03:33 ATLAS.root_0
[2025-10-10 04:07:03] -rw-r--r-- 2 boinc boinc    569681 Okt 10 03:33 input.tar.gz
[2025-10-10 04:07:03] -rw-r--r-- 2 boinc boinc     15120 Okt 10 03:33 start_atlas.sh
[2025-10-10 04:07:03] -rw------- 1 boinc boinc 197075535 Okt 10 04:05 HITS.pool.root.1
[2025-10-10 04:07:03] -rw------- 1 boinc boinc    696320 Okt 10 04:07 result.tar.gz
04:07:05 (432952): run_atlas exited; CPU time 21085.739453
04:07:05 (432952): called boinc_finish(0)

</stderr_txt>
]]>

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