Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:44:26 (931645): wrapper (7.7.26015): starting
17:44:26 (931645): wrapper: running run_atlas (--nthreads 8)
[2025-10-09 17:44:26] Arguments: --nthreads 8
[2025-10-09 17:44:26] Threads: 8
[2025-10-09 17:44:26] Checking for CVMFS
[2025-10-09 17:44:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 17:44:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 17:44:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 17:44:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 17:44:28] 2.11.3.0 2018 27863 143680 151528 3 226 31371114 45568001 10525 130560 0 168720428 99.848 73990258 14451 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-09 17:44:28] CVMFS is ok
[2025-10-09 17:44:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 17:44:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 17:44:28] Further information can be found at the LHC@home message board.
[2025-10-09 17:44:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 17:44:28] Checking for apptainer binary...
[2025-10-09 17:44:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 17:44:28] Running /usr/bin/apptainer --version
[2025-10-09 17:44:28] apptainer version 1.4.1-1.el9
[2025-10-09 17:44:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 17:44:28] wns0002.triumf.lcg
[2025-10-09 17:44:28] apptainer works
[2025-10-09 17:44:28] Set ATHENA_PROC_NUMBER=8
[2025-10-09 17:44:28] Set ATHENA_CORE_NUMBER=8
[2025-10-09 17:44:29] Starting ATLAS job with PandaID=6837364823
[2025-10-09 17:44:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 17:52:22]  *** The last 200 lines of the pilot log: ***
[2025-10-09 17:52:22] 2025-10-10 00:51:39,456 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 17:52:22] 2025-10-10 00:51:39,456 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 17:52:22] 2025-10-10 00:51:39,457 | WARNING  | wrong length of table data, x=[1760057247.0, 1760057308.0], y=[1090.0, 475252.0] (must be same and length>=4)
[2025-10-09 17:52:22] 2025-10-10 00:51:39,457 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-09 17:52:22] 2025-10-10 00:51:39,457 | INFO     | ..............................
[2025-10-09 17:52:22] 2025-10-10 00:51:39,457 | INFO     | . Timing measurements:
[2025-10-09 17:52:22] 2025-10-10 00:51:39,457 | INFO     | . get job = 0 s
[2025-10-09 17:52:22] 2025-10-10 00:51:39,457 | INFO     | . initial setup = 7 s
[2025-10-09 17:52:22] 2025-10-10 00:51:39,457 | INFO     | . payload setup = 43 s
[2025-10-09 17:52:22] 2025-10-10 00:51:39,458 | INFO     | . stage-in = 0 s
[2025-10-09 17:52:22] 2025-10-10 00:51:39,458 | INFO     | . payload execution = 130 s
[2025-10-09 17:52:22] 2025-10-10 00:51:39,458 | INFO     | . stage-out = 0 s
[2025-10-09 17:52:22] 2025-10-10 00:51:39,458 | INFO     | . log creation = 0 s
[2025-10-09 17:52:22] 2025-10-10 00:51:39,458 | INFO     | ..............................
[2025-10-09 17:52:22] 2025-10-10 00:51:39,458 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 17:52:22] 2025-10-10 00:51:39,468 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837364823/pilotlog.txt
[2025-10-09 17:52:22] 2025-10-10 00:51:39,530 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-09 17:52:22] - Log from pilotlog.txt -
[2025-10-09 17:52:22] 2025-10-10 00:51:39,442 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837364823/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 17:52:22] 2025-10-10 00:51:39,456 | INFO     | extracted standard info from prmon json
[2025-10-09 17:52:22] 2025-10-10 00:51:39,456 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 17:52:22] 2025-10-10 00:51:39,456 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 17:52:22] 2025-10-10 00:51:39,456 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 17:52:22] 2025-10-10 00:51:39,456 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 17:52:22] 2025-10-10 00:51:39,457 | WARNING  | wrong length of table data, x=[1760057247.0, 1760057308.0], y=[1090.0, 475252.0] (must be same and length>=4)
[2025-10-09 17:52:22] 2025-10-10 00:51:39,457 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-09 17:52:22] 2025-10-10 00:51:39,457 | INFO     | ..............................
[2025-10-09 17:52:22] 2025-10-10 00:51:39,457 | INFO     | . Timing measurements:
[2025-10-09 17:52:22] 2025-10-10 00:51:39,457 | INFO     | . get job = 0 s
[2025-10-09 17:52:22] 2025-10-10 00:51:39,457 | INFO     | . initial setup = 7 s
[2025-10-09 17:52:22] 2025-10-10 00:51:39,457 | INFO     | . payload setup = 43 s
[2025-10-09 17:52:22] 2025-10-10 00:51:39,458 | INFO     | . stage-in = 0 s
[2025-10-09 17:52:22] 2025-10-10 00:51:39,458 | INFO     | . payload execution = 130 s
[2025-10-09 17:52:22] 2025-10-10 00:51:39,458 | INFO     | . stage-out = 0 s
[2025-10-09 17:52:22] 2025-10-10 00:51:39,458 | INFO     | . log creation = 0 s
[2025-10-09 17:52:22] 2025-10-10 00:51:39,458 | INFO     | ..............................
[2025-10-09 17:52:22] 2025-10-10 00:51:39,458 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 17:52:22] 2025-10-10 00:51:39,468 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837364823/pilotlog.txt
[2025-10-09 17:52:22] 2025-10-10 00:51:39,530 | WARNING  | 
[2025-10-09 17:52:22] [begin log extracts]
[2025-10-09 17:52:22] - Log from pilotlog.txt -
[2025-10-09 17:52:22] 2025-10-10 00:51:39,442 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837364823/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 17:52:22] 2025-10-10 00:51:39,456 | INFO     | extracted standard info from prmon json
[2025-10-09 17:52:22] 2025-10-10 00:51:39,456 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 17:52:22] 2025-10-10 00:51:39,456 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 17:52:22] 2025-10-10 00:51:39,456 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 17:52:22] 2025-10-10 00:51:39,456 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 17:52:22] 2025-10-10 00:51:39,457 | WARNING  | wrong length of table data, x=[1760057247.0, 1760057308.0], y=[1090.0, 475252.0] (must be same and length>=4)
[2025-10-09 17:52:22] 2025-10-10 00:51:39,457 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-09 17:52:22] 2025-10-10 00:51:39,457 | INFO     | ..............................
[2025-10-09 17:52:22] 2025-10-10 00:51:39,457 | INFO     | . Timing measurements:
[2025-10-09 17:52:22] 2025-10-10 00:51:39,457 | INFO     | . get job = 0 s
[2025-10-09 17:52:22] 2025-10-10 00:51:39,457 | INFO     | . initial setup = 7 s
[2025-10-09 17:52:22] 2025-10-10 00:51:39,457 | INFO     | . payload setup = 43 s
[2025-10-09 17:52:22] 2025-10-10 00:51:39,458 | INFO     | . stage-in = 0 s
[2025-10-09 17:52:22] 2025-10-10 00:51:39,458 | INFO     | . payload execution = 130 s
[2025-10-09 17:52:22] 2025-10-10 00:51:39,458 | INFO     | . stage-out = 0 s
[2025-10-09 17:52:22] 2025-10-10 00:51:39,458 | INFO     | . log creation = 0 s
[2025-10-09 17:52:22] 2025-10-10 00:51:39,458 | INFO     | ..............................
[2025-10-09 17:52:22] 2025-10-10 00:51:39,458 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 17:52:22] 2025-10-10 00:51:39,468 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837364823/pilotlog.txt
[2025-10-09 17:52:22] [end log extracts]
[2025-10-09 17:52:22] 2025-10-10 00:51:39,530 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-09 17:52:22] 2025-10-10 00:51:39,534 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-09 17:52:22] 2025-10-10 00:51:39,784 | INFO     | 
[2025-10-09 17:52:22] 2025-10-10 00:51:39,784 | INFO     | job summary report
[2025-10-09 17:52:22] 2025-10-10 00:51:39,784 | INFO     | --------------------------------------------------
[2025-10-09 17:52:22] 2025-10-10 00:51:39,784 | INFO     | PanDA job id: 6837364823
[2025-10-09 17:52:22] 2025-10-10 00:51:39,784 | INFO     | task id: 46676269
[2025-10-09 17:52:22] 2025-10-10 00:51:39,784 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-09 17:49:01,939 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-09 17:52:22] 2025-10-10 00:51:39,784 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 17:52:22] 2025-10-10 00:51:39,784 | INFO     | pilot state: failed 
[2025-10-09 17:52:22] 2025-10-10 00:51:39,784 | INFO     | transexitcode: 65
[2025-10-09 17:52:22] 2025-10-10 00:51:39,784 | INFO     | exeerrorcode: 65
[2025-10-09 17:52:22] 2025-10-10 00:51:39,785 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 17:52:22] 2025-10-10 00:51:39,785 | INFO     | exitcode: 65
[2025-10-09 17:52:22] 2025-10-10 00:51:39,785 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 17:52:22] 2025-10-10 00:51:39,785 | INFO     | cpuconsumptiontime: 20 s
[2025-10-09 17:52:22] 2025-10-10 00:51:39,791 | INFO     | nevents: 0
[2025-10-09 17:52:22] 2025-10-10 00:51:39,791 | INFO     | neventsw: 0
[2025-10-09 17:52:22] 2025-10-10 00:51:39,791 | INFO     | pid: 942356
[2025-10-09 17:52:22] 2025-10-10 00:51:39,791 | INFO     | pgrp: 942356
[2025-10-09 17:52:22] 2025-10-10 00:51:39,791 | INFO     | corecount: 8
[2025-10-09 17:52:22] 2025-10-10 00:51:39,791 | INFO     | event service: False
[2025-10-09 17:52:22] 2025-10-10 00:51:39,791 | INFO     | sizes: {0: 2348029, 1: 2348711, 2: 2348910, 13: 2348910, 24: 2348966, 29: 2349256, 35: 2349412, 177: 2372777, 178: 2377069, 180: 2377097, 322: 2377263}
[2025-10-09 17:52:22] 2025-10-10 00:51:39,799 | INFO     | --------------------------------------------------
[2025-10-09 17:52:22] 2025-10-10 00:51:39,799 | INFO     | 
[2025-10-09 17:52:22] 2025-10-10 00:51:39,799 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-09 17:52:22] 2025-10-10 00:51:39,858 | INFO     | time since job start (383s) is within the limit (172800.0s)
[2025-10-09 17:52:22] 2025-10-10 00:51:39,870 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 17:52:22] 2025-10-10 00:51:39,870 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 17:52:22] 2025-10-10 00:51:39,870 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 17:52:22] 2025-10-10 00:51:39,870 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 17:52:22] 2025-10-10 00:51:39,870 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 17:52:22] 2025-10-10 00:51:39,871 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 17:52:22] 2025-10-10 00:51:39,871 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 17:52:22] 2025-10-10 00:51:39,871 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 17:52:22] 2025-10-10 00:51:39,871 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 17:52:22] 2025-10-10 00:51:39,871 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 17:52:22] 2025-10-10 00:51:39,871 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 17:52:22] 2025-10-10 00:51:39,871 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 17:52:22] 2025-10-10 00:51:39,871 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 17:52:22] 2025-10-10 00:51:39,871 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 17:52:22] 2025-10-10 00:51:39,871 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 17:52:22] 2025-10-10 00:51:39,871 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 17:52:22] 2025-10-10 00:51:39,871 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 17:52:22] 2025-10-10 00:51:39,871 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 17:52:22] 2025-10-10 00:51:39,871 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 17:52:22] 2025-10-10 00:51:39,872 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 17:52:22] 2025-10-10 00:51:39,872 | INFO     | job 6837364823 has completed (purged errors)
[2025-10-09 17:52:22] 2025-10-10 00:51:39,872 | INFO     | overall cleanup function is called
[2025-10-09 17:52:22] 2025-10-10 00:51:40,887 | INFO     | --- collectZombieJob: --- 10, [942356]
[2025-10-09 17:52:22] 2025-10-10 00:51:40,887 | INFO     | zombie collector waiting for pid 942356
[2025-10-09 17:52:22] 2025-10-10 00:51:40,887 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 17:52:22] 2025-10-10 00:51:40,887 | INFO     | collected zombie processes
[2025-10-09 17:52:22] 2025-10-10 00:51:40,887 | INFO     | will attempt to kill all subprocesses of pid=942356
[2025-10-09 17:52:22] 2025-10-10 00:51:41,632 | INFO     | process IDs to be killed: [942356] (in reverse order)
[2025-10-09 17:52:22] 2025-10-10 00:51:41,934 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 17:52:22] 2025-10-10 00:51:41,934 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 17:52:22] 2025-10-10 00:51:41,967 | INFO     | did not find any defunct processes belonging to 942356
[2025-10-09 17:52:22] 2025-10-10 00:51:41,997 | INFO     | did not find any defunct processes belonging to 942356
[2025-10-09 17:52:22] 2025-10-10 00:51:41,997 | INFO     | ready for new job
[2025-10-09 17:52:22] 2025-10-10 00:51:41,997 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 17:52:22] 2025-10-10 00:51:42,000 | INFO     | ***************************************
[2025-10-09 17:52:22] 2025-10-10 00:51:42,000 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 17:52:22] 2025-10-10 00:51:42,000 | INFO     | ***************************************
[2025-10-09 17:52:22] 2025-10-10 00:51:42,001 | INFO     | 
[2025-10-09 17:52:22] 2025-10-10 00:51:42,002 | INFO     | architecture information:
[2025-10-09 17:52:22] 2025-10-10 00:51:42,008 | INFO     | executing command: cat /etc/os-release
[2025-10-09 17:52:22] 2025-10-10 00:51:42,046 | INFO     | cat /etc/os-release:
[2025-10-09 17:52:22] NAME="CentOS Linux"
[2025-10-09 17:52:22] VERSION="7 (Core)"
[2025-10-09 17:52:22] ID="centos"
[2025-10-09 17:52:22] ID_LIKE="rhel fedora"
[2025-10-09 17:52:22] VERSION_ID="7"
[2025-10-09 17:52:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 17:52:22] ANSI_COLOR="0;31"
[2025-10-09 17:52:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 17:52:22] HOME_URL="https://www.centos.org/"
[2025-10-09 17:52:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 17:52:22] 
[2025-10-09 17:52:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 17:52:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 17:52:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 17:52:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 17:52:22] 
[2025-10-09 17:52:22] 2025-10-10 00:51:42,047 | INFO     | ***************************************
[2025-10-09 17:52:22] 2025-10-10 00:51:42,550 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-09 17:52:22] 2025-10-10 00:51:42,611 | INFO     | sufficient remaining disk space (1249137131520 B)
[2025-10-09 17:52:22] 2025-10-10 00:51:42,611 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 17:52:22] 2025-10-10 00:51:42,611 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 17:52:22] 2025-10-10 00:51:42,611 | INFO     | update_server=False
[2025-10-09 17:52:22] 2025-10-10 00:51:42,611 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 17:52:22] 2025-10-10 00:51:42,617 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 17:52:22] 2025-10-10 00:51:42,618 | INFO     | aborting loop
[2025-10-09 17:52:22] 2025-10-10 00:51:42,749 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 17:52:22] 2025-10-10 00:51:42,851 | INFO     | all data control threads have been joined
[2025-10-09 17:52:22] 2025-10-10 00:51:43,333 | INFO     | all job control threads have been joined
[2025-10-09 17:52:22] 2025-10-10 00:51:43,621 | INFO     | [job] retrieve thread has finished
[2025-10-09 17:52:22] 2025-10-10 00:51:43,623 | INFO     | [job] job monitor thread has finished
[2025-10-09 17:52:22] 2025-10-10 00:51:43,808 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 17:52:22] 2025-10-10 00:51:43,856 | INFO     | [data] control thread has finished
[2025-10-09 17:52:22] 2025-10-10 00:51:43,949 | INFO     | all payload control threads have been joined
[2025-10-09 17:52:22] 2025-10-10 00:51:44,015 | INFO     | [data] copytool_in thread has finished
[2025-10-09 17:52:22] 2025-10-10 00:51:44,085 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 17:52:22] 2025-10-10 00:51:44,184 | INFO     | [job] validate thread has finished
[2025-10-09 17:52:22] 2025-10-10 00:51:44,184 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 17:52:22] 2025-10-10 00:51:44,278 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 17:52:22] 2025-10-10 00:51:44,339 | INFO     | [job] control thread has finished
[2025-10-09 17:52:22] 2025-10-10 00:51:44,761 | INFO     | [data] copytool_out thread has finished
[2025-10-09 17:52:22] 2025-10-10 00:51:44,788 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 17:52:22] 2025-10-10 00:51:44,917 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 17:52:22] 2025-10-10 00:51:44,955 | INFO     | [payload] control thread has finished
[2025-10-09 17:52:22] 2025-10-10 00:51:45,095 | INFO     | [payload] failed_post thread has finished
[2025-10-09 17:52:22] 2025-10-10 00:51:45,149 | INFO     | [payload] validate_post thread has finished
[2025-10-09 17:52:22] 2025-10-10 00:51:45,793 | INFO     | [job] queue monitor thread has finished
[2025-10-09 17:52:22] 2025-10-10 00:51:47,817 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 17:52:22] 2025-10-10 00:52:13,792 | INFO     | PID=935421 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-09 17:52:22] 2025-10-10 00:52:13,792 | INFO     | .. there are 33 such processes running
[2025-10-09 17:52:22] 2025-10-10 00:52:13,793 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 17:52:22] 2025-10-10 00:52:13,793 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 17:52:22] 2025-10-10 00:52:13,793 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 17:52:22] 2025-10-10 00:52:16,047 | INFO     | [monitor] cgroup control has ended
[2025-10-09 17:52:22] 2025-10-10 00:52:16,157 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139669621671744)>', '<ExcThread(monitor, started 139668645476096)>']
[2025-10-09 17:52:22] 2025-10-10 00:52:16,810 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 17:52:22] 2025-10-10 00:52:16,810 | INFO     | [monitor] control thread has ended
[2025-10-09 17:52:22] 2025-10-10 00:52:21,183 | INFO     | all workflow threads have been joined
[2025-10-09 17:52:22] 2025-10-10 00:52:21,183 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 17:52:22] 2025-10-10 00:52:21,183 | INFO     | traces error code: 0
[2025-10-09 17:52:22] 2025-10-10 00:52:21,183 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 17:52:22] 2025-10-10 00:52:21,470 [wrapper] ==== pilot stdout END ====
[2025-10-09 17:52:22] 2025-10-10 00:52:21,474 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 17:52:22] 2025-10-10 00:52:21,486 [wrapper] pilotpid: 935421
[2025-10-09 17:52:22] 2025-10-10 00:52:21,495 [wrapper] Pilot exit status: 0
[2025-10-09 17:52:22] 2025-10-10 00:52:21,528 [wrapper] pandaids: 6837364823
[2025-10-09 17:52:22] 2025-10-10 00:52:21,822 [wrapper] cleanup supervisor_pilot  935427 935422
[2025-10-09 17:52:22] 2025-10-10 00:52:21,846 [wrapper] Test setup, not cleaning
[2025-10-09 17:52:22] 2025-10-10 00:52:21,861 [wrapper] apfmon messages muted
[2025-10-09 17:52:22] 2025-10-10 00:52:21,875 [wrapper] ==== wrapper stdout END ====
[2025-10-09 17:52:22] 2025-10-10 00:52:21,888 [wrapper] ==== wrapper stderr END ====
[2025-10-09 17:52:22]  *** Error codes and diagnostics ***
[2025-10-09 17:52:22]     "exeErrorCode": 65,
[2025-10-09 17:52:22]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 17:52:22]     "pilotErrorCode": 1305,
[2025-10-09 17:52:22]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 17:52:22]  *** Listing of results directory ***
[2025-10-09 17:52:22] total 220672
[2025-10-09 17:52:22] -rw-r--r--. 1 boinc boinc    557409 Oct  9 15:12 pilot3.tar.gz
[2025-10-09 17:52:22] -rwx------. 1 boinc boinc     36292 Oct  9 15:14 runpilot2-wrapper.sh
[2025-10-09 17:52:22] -rw-r--r--. 1 boinc boinc      5112 Oct  9 15:14 queuedata.json
[2025-10-09 17:52:22] -rw-r--r--. 1 boinc boinc       100 Oct  9 17:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 17:52:22] -rwxr-xr-x. 1 boinc boinc      7986 Oct  9 17:44 run_atlas
[2025-10-09 17:52:22] -rw-r--r--. 1 boinc boinc       105 Oct  9 17:44 job.xml
[2025-10-09 17:52:22] -rw-r--r--. 2 boinc boinc 221813811 Oct  9 17:44 EVNT.46676267._001143.pool.root.1
[2025-10-09 17:52:22] -rw-r--r--. 2 boinc boinc     15120 Oct  9 17:44 start_atlas.sh
[2025-10-09 17:52:22] drwxrwx--x. 2 boinc boinc      4096 Oct  9 17:44 shared
[2025-10-09 17:52:22] -rw-r--r--. 2 boinc boinc    569674 Oct  9 17:44 input.tar.gz
[2025-10-09 17:52:22] -rw-r--r--. 1 boinc boinc      6443 Oct  9 17:44 init_data.xml
[2025-10-09 17:52:22] -rw-r--r--. 1 boinc boinc         0 Oct  9 17:44 boinc_lockfile
[2025-10-09 17:52:22] -rw-r--r--. 1 boinc boinc      2550 Oct  9 17:44 pandaJob.out
[2025-10-09 17:52:22] -rw-------. 1 boinc boinc    975454 Oct  9 17:45 agis_schedconf.cvmfs.json
[2025-10-09 17:52:22] -rw-------. 1 boinc boinc   1560580 Oct  9 17:45 agis_ddmendpoints.agis.ALL.json
[2025-10-09 17:52:22] drwx------. 5 boinc boinc      4096 Oct  9 17:45 pilot3
[2025-10-09 17:52:22] -rw-r--r--. 1 boinc boinc       525 Oct  9 17:49 boinc_task_state.xml
[2025-10-09 17:52:22] -rw-------. 1 boinc boinc       983 Oct  9 17:49 memory_monitor_summary.json
[2025-10-09 17:52:22] -rw-------. 1 boinc boinc     23499 Oct  9 17:49 log.46676269._027199.job.log.tgz.1
[2025-10-09 17:52:22] -rw-------. 1 boinc boinc        95 Oct  9 17:51 pilot_heartbeat.json
[2025-10-09 17:52:22] -rw-------. 1 boinc boinc      8434 Oct  9 17:51 heartbeat.json
[2025-10-09 17:52:22] -rw-r--r--. 1 boinc boinc      8192 Oct  9 17:52 boinc_mmap_file
[2025-10-09 17:52:22] -rw-r--r--. 1 boinc boinc        23 Oct  9 17:52 wrapper_checkpoint.txt
[2025-10-09 17:52:22] -rw-------. 1 boinc boinc      4822 Oct  9 17:52 pilotlog.txt
[2025-10-09 17:52:22] -rw-------. 1 boinc boinc    106401 Oct  9 17:52 log.46676269._027199.job.log.1
[2025-10-09 17:52:22] -rw-------. 1 boinc boinc       188 Oct  9 17:52 output.list
[2025-10-09 17:52:22] -rw-r--r--. 1 boinc boinc       620 Oct  9 17:52 runtime_log
[2025-10-09 17:52:22] -rw-------. 1 boinc boinc    153600 Oct  9 17:52 result.tar.gz
[2025-10-09 17:52:22] -rw-------. 1 boinc boinc       644 Oct  9 17:52 wdgMDmh5DR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmcpOMDmOlPCWm.diag
[2025-10-09 17:52:22] -rw-r--r--. 1 boinc boinc      8526 Oct  9 17:52 runtime_log.err
[2025-10-09 17:52:22] -rw-r--r--. 1 boinc boinc      9852 Oct  9 17:52 stderr.txt
[2025-10-09 17:52:22] No HITS result produced
[2025-10-09 17:52:22]  *** Contents of shared directory: ***
[2025-10-09 17:52:22] total 217348
[2025-10-09 17:52:22] -rw-r--r--. 2 boinc boinc 221813811 Oct  9 17:44 ATLAS.root_0
[2025-10-09 17:52:22] -rw-r--r--. 2 boinc boinc     15120 Oct  9 17:44 start_atlas.sh
[2025-10-09 17:52:22] -rw-r--r--. 2 boinc boinc    569674 Oct  9 17:44 input.tar.gz
[2025-10-09 17:52:22] -rw-------. 1 boinc boinc    153600 Oct  9 17:52 result.tar.gz
17:52:23 (931645): run_atlas exited; CPU time 32.266734
17:52:23 (931645): called boinc_finish(0)

</stderr_txt>
]]>

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