Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:27 (1329492): wrapper (7.7.26015): starting
00:01:27 (1329492): wrapper: running run_atlas (--nthreads 9)
[2025-10-10 00:01:27] Arguments: --nthreads 9
[2025-10-10 00:01:27] Threads: 9
[2025-10-10 00:01:27] Checking for CVMFS
[2025-10-10 00:01:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 00:01:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 00:01:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 00:01:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 00:01:30] 2.13.2.0 3753 134779 877644 151533 2 118 18096501 21042176 25317 16776704 0 65001977 99.320 108663943 27679 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 00:01:30] CVMFS is ok
[2025-10-10 00:01:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 00:01:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 00:01:30] Further information can be found at the LHC@home message board.
[2025-10-10 00:01:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 00:01:30] Checking for apptainer binary...
[2025-10-10 00:01:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 00:01:30] Running /usr/bin/apptainer --version
[2025-10-10 00:01:31] apptainer version 1.4.3-1.el9
[2025-10-10 00:01:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 00:01:31] c-16-10.aglt2.org
[2025-10-10 00:01:31] apptainer works
[2025-10-10 00:01:32] Set ATHENA_PROC_NUMBER=9
[2025-10-10 00:01:32] Set ATHENA_CORE_NUMBER=9
[2025-10-10 00:01:32] Starting ATLAS job with PandaID=6837359089
[2025-10-10 00:01:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 21:42:16]  *** The last 200 lines of the pilot log: ***
[2025-10-10 21:42:16] 2025-10-11 01:41:38,577 | INFO     | PID=1338522 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 21:42:16] 2025-10-11 01:41:38,583 | INFO     | .. there are 41 such processes running
[2025-10-10 21:42:16] 2025-10-11 01:41:39,585 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-10 21:42:16] 2025-10-11 01:41:39,593 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2900.081000000002
[2025-10-10 21:42:16] 2025-10-11 01:41:39,602 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6837359089/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 21:42:16] 2025-10-11 01:41:39,603 | INFO     | extracted standard info from prmon json
[2025-10-10 21:42:16] 2025-10-11 01:41:39,603 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 21:42:16] 2025-10-11 01:41:39,603 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 21:42:16] 2025-10-11 01:41:39,604 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 21:42:16] 2025-10-11 01:41:39,604 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 21:42:16] 2025-10-11 01:41:39,636 | INFO     | fitting pss+swap vs Time
[2025-10-10 21:42:16] 2025-10-11 01:41:39,638 | INFO     | sum of square deviations: 639648826145.3904
[2025-10-10 21:42:16] 2025-10-11 01:41:39,646 | INFO     | time since job start (77871s) is within the limit (172800.0s)
[2025-10-10 21:42:16] 2025-10-11 01:41:39,687 | INFO     | sum of deviations: 1215657159537.2075
[2025-10-10 21:42:16] 2025-10-11 01:41:39,687 | INFO     | mean x: 1760108019.3849175
[2025-10-10 21:42:16] 2025-10-11 01:41:39,688 | INFO     | mean y: 2077011.6669285153
[2025-10-10 21:42:16] 2025-10-11 01:41:39,688 | INFO     | -- intersect: -3343020841.8196096
[2025-10-10 21:42:16] 2025-10-11 01:41:39,688 | INFO     | intersect: -3343020841.8196096
[2025-10-10 21:42:16] 2025-10-11 01:41:39,690 | INFO     | chi2: 9.45146771581202
[2025-10-10 21:42:16] 2025-10-11 01:41:39,692 | INFO     | sum of square deviations: 632141446335.7616
[2025-10-10 21:42:16] 2025-10-11 01:41:39,740 | INFO     | sum of deviations: 1353180004795.09
[2025-10-10 21:42:16] 2025-10-11 01:41:39,741 | INFO     | mean x: 1760107866.8903785
[2025-10-10 21:42:16] 2025-10-11 01:41:39,741 | INFO     | mean y: 2079799.187697161
[2025-10-10 21:42:16] 2025-10-11 01:41:39,741 | INFO     | -- intersect: -3765657288.080485
[2025-10-10 21:42:16] 2025-10-11 01:41:39,741 | INFO     | intersect: -3765657288.080485
[2025-10-10 21:42:16] 2025-10-11 01:41:39,743 | INFO     | chi2: 8.112846595452037
[2025-10-10 21:42:16] 2025-10-11 01:41:39,743 | INFO     | current chi2=8.112846595452037 (change=14.163103134981991 %)
[2025-10-10 21:42:16] 2025-10-11 01:41:39,743 | INFO     | right removable region: 1267
[2025-10-10 21:42:16] 2025-10-11 01:41:39,745 | INFO     | sum of square deviations: 632140525971.3208
[2025-10-10 21:42:16] 2025-10-11 01:41:39,796 | INFO     | sum of deviations: 906488373233.8733
[2025-10-10 21:42:16] 2025-10-11 01:41:39,797 | INFO     | mean x: 1760108171.8888013
[2025-10-10 21:42:16] 2025-10-11 01:41:39,797 | INFO     | mean y: 2083288.8572555205
[2025-10-10 21:42:16] 2025-10-11 01:41:39,797 | INFO     | -- intersect: -2521908652.6489787
[2025-10-10 21:42:16] 2025-10-11 01:41:39,797 | INFO     | intersect: -2521908652.6489787
[2025-10-10 21:42:16] 2025-10-11 01:41:39,799 | INFO     | chi2: 6.365687332560886
[2025-10-10 21:42:16] 2025-10-11 01:41:39,799 | INFO     | current chi2=6.365687332560886 (change=32.6486898758456 %)
[2025-10-10 21:42:16] 2025-10-11 01:41:39,801 | INFO     | sum of square deviations: 624691358712.7802
[2025-10-10 21:42:16] 2025-10-11 01:41:39,850 | INFO     | sum of deviations: 707424599494.9393
[2025-10-10 21:42:16] 2025-10-11 01:41:39,850 | INFO     | mean x: 1760108324.391132
[2025-10-10 21:42:16] 2025-10-11 01:41:39,850 | INFO     | mean y: 2087362.726840855
[2025-10-10 21:42:16] 2025-10-11 01:41:39,851 | INFO     | -- intersect: -1991127220.8969996
[2025-10-10 21:42:16] 2025-10-11 01:41:39,851 | INFO     | intersect: -1991127220.8969996
[2025-10-10 21:42:16] 2025-10-11 01:41:39,852 | INFO     | chi2: 5.132756466420806
[2025-10-10 21:42:16] 2025-10-11 01:41:39,853 | INFO     | current chi2=5.132756466420806 (change=19.368385560402288 %)
[2025-10-10 21:42:16] 2025-10-11 01:41:39,853 | INFO     | left removable region: 20
[2025-10-10 21:42:16] 2025-10-11 01:41:39,855 | INFO     | sum of square deviations: 601248482000.1062
[2025-10-10 21:42:16] 2025-10-11 01:41:39,904 | INFO     | sum of deviations: 505371213099.273
[2025-10-10 21:42:16] 2025-10-11 01:41:39,905 | INFO     | mean x: 1760108446.403368
[2025-10-10 21:42:16] 2025-10-11 01:41:39,905 | INFO     | mean y: 2097558.4587008823
[2025-10-10 21:42:16] 2025-10-11 01:41:39,905 | INFO     | -- intersect: -1477337595.849081
[2025-10-10 21:42:16] 2025-10-11 01:41:39,905 | INFO     | intersect: -1477337595.849081
[2025-10-10 21:42:16] 2025-10-11 01:41:39,907 | INFO     | chi2: 1.9553591410401585
[2025-10-10 21:42:16] 2025-10-11 01:41:39,907 | INFO     | -- intersect: -1477337595.849081
[2025-10-10 21:42:16] 2025-10-11 01:41:39,907 | INFO     | current memory leak: 0.84 B/s (using 1247 data points, chi2=1.96)
[2025-10-10 21:42:16] 2025-10-11 01:41:39,909 | INFO     | could have reported an average CPU frequency of 2900 MHz (45 samples)
[2025-10-10 21:42:16] 2025-10-11 01:41:39,909 | INFO     | ..............................
[2025-10-10 21:42:16] 2025-10-11 01:41:39,910 | INFO     | . Timing measurements:
[2025-10-10 21:42:16] 2025-10-11 01:41:39,910 | INFO     | . get job = 0 s
[2025-10-10 21:42:16] 2025-10-11 01:41:39,910 | INFO     | . initial setup = 20 s
[2025-10-10 21:42:16] 2025-10-11 01:41:39,910 | INFO     | . payload setup = 45 s
[2025-10-10 21:42:16] 2025-10-11 01:41:39,910 | INFO     | . stage-in = 1 s
[2025-10-10 21:42:16] 2025-10-11 01:41:39,910 | INFO     | . payload execution = 77646 s
[2025-10-10 21:42:16] 2025-10-11 01:41:39,910 | INFO     | . stage-out = 5 s
[2025-10-10 21:42:16] 2025-10-11 01:41:39,911 | INFO     | . log creation = 0 s
[2025-10-10 21:42:16] 2025-10-11 01:41:39,911 | INFO     | ..............................
[2025-10-10 21:42:16] 2025-10-11 01:41:40,100 | INFO     | 
[2025-10-10 21:42:16] 2025-10-11 01:41:40,100 | INFO     | job summary report
[2025-10-10 21:42:16] 2025-10-11 01:41:40,100 | INFO     | --------------------------------------------------
[2025-10-10 21:42:16] 2025-10-11 01:41:40,100 | INFO     | PanDA job id: 6837359089
[2025-10-10 21:42:16] 2025-10-11 01:41:40,101 | INFO     | task id: 46676269
[2025-10-10 21:42:16] 2025-10-11 01:41:40,101 | INFO     | errors: (none)
[2025-10-10 21:42:16] 2025-10-11 01:41:40,101 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 21:42:16] 2025-10-11 01:41:40,101 | INFO     | pilot state: finished 
[2025-10-10 21:42:16] 2025-10-11 01:41:40,101 | INFO     | transexitcode: 0
[2025-10-10 21:42:16] 2025-10-11 01:41:40,101 | INFO     | exeerrorcode: 0
[2025-10-10 21:42:16] 2025-10-11 01:41:40,101 | INFO     | exeerrordiag: 
[2025-10-10 21:42:16] 2025-10-11 01:41:40,102 | INFO     | exitcode: 0
[2025-10-10 21:42:16] 2025-10-11 01:41:40,102 | INFO     | exitmsg: OK
[2025-10-10 21:42:16] 2025-10-11 01:41:40,102 | INFO     | cpuconsumptiontime: 78088 s
[2025-10-10 21:42:16] 2025-10-11 01:41:40,102 | INFO     | nevents: 400
[2025-10-10 21:42:16] 2025-10-11 01:41:40,102 | INFO     | neventsw: 0
[2025-10-10 21:42:16] 2025-10-11 01:41:40,102 | INFO     | pid: 1360972
[2025-10-10 21:42:16] 2025-10-11 01:41:40,103 | INFO     | pgrp: 1360972
[2025-10-10 21:42:16] 2025-10-11 01:41:40,103 | INFO     | corecount: 9
[2025-10-10 21:42:16] 2025-10-11 01:41:40,103 | INFO     | event service: False
[2025-10-10 21:42:16] 2025-10-11 01:41:40,103 | INFO     | sizes: {0: 2348027, 1: 2348712, 3: 2348911, 4: 2348911, 5: 2348939, 17: 2348995, 28: 2349151, 40: 2349179, 54: 2349207, 58: 2349497, 66: 2349525, 77698: 2405656, 7
[2025-10-10 21:42:16] 2025-10-11 01:41:40,103 | INFO     | --------------------------------------------------
[2025-10-10 21:42:16] 2025-10-11 01:41:40,103 | INFO     | 
[2025-10-10 21:42:16] 2025-10-11 01:41:40,104 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-10 21:42:16] 2025-10-11 01:41:40,180 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 21:42:16] 2025-10-11 01:41:40,181 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 21:42:16] 2025-10-11 01:41:40,181 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 21:42:16] 2025-10-11 01:41:40,181 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 21:42:16] 2025-10-11 01:41:40,181 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 21:42:16] 2025-10-11 01:41:40,181 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 21:42:16] 2025-10-11 01:41:40,181 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 21:42:16] 2025-10-11 01:41:40,182 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 21:42:16] 2025-10-11 01:41:40,182 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 21:42:16] 2025-10-11 01:41:40,182 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 21:42:16] 2025-10-11 01:41:40,182 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 21:42:16] 2025-10-11 01:41:40,182 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 21:42:16] 2025-10-11 01:41:40,182 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 21:42:16] 2025-10-11 01:41:40,183 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 21:42:16] 2025-10-11 01:41:40,183 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 21:42:16] 2025-10-11 01:41:40,183 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 21:42:16] 2025-10-11 01:41:40,183 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 21:42:16] 2025-10-11 01:41:40,183 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 21:42:16] 2025-10-11 01:41:40,183 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 21:42:16] 2025-10-11 01:41:40,184 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 21:42:16] 2025-10-11 01:41:40,184 | INFO     | job 6837359089 has completed (purged errors)
[2025-10-10 21:42:16] 2025-10-11 01:41:40,184 | INFO     | overall cleanup function is called
[2025-10-10 21:42:16] 2025-10-11 01:41:41,232 | INFO     | --- collectZombieJob: --- 10, [1360972]
[2025-10-10 21:42:16] 2025-10-11 01:41:41,232 | INFO     | zombie collector waiting for pid 1360972
[2025-10-10 21:42:16] 2025-10-11 01:41:41,232 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 21:42:16] 2025-10-11 01:41:41,232 | INFO     | collected zombie processes
[2025-10-10 21:42:16] 2025-10-11 01:41:41,233 | INFO     | will attempt to kill all subprocesses of pid=1360972
[2025-10-10 21:42:16] 2025-10-11 01:41:42,994 | INFO     | process IDs to be killed: [1360972] (in reverse order)
[2025-10-10 21:42:16] 2025-10-11 01:41:43,714 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 21:42:16] 2025-10-11 01:41:43,714 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 21:42:16] 2025-10-11 01:41:43,786 | INFO     | did not find any defunct processes belonging to 1360972
[2025-10-10 21:42:16] 2025-10-11 01:41:43,844 | INFO     | did not find any defunct processes belonging to 1360972
[2025-10-10 21:42:16] 2025-10-11 01:41:43,853 | INFO     | ready for new job
[2025-10-10 21:42:16] 2025-10-11 01:41:43,853 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 21:42:16] 2025-10-11 01:41:43,869 | INFO     | ***************************************
[2025-10-10 21:42:16] 2025-10-11 01:41:43,870 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 21:42:16] 2025-10-11 01:41:43,870 | INFO     | ***************************************
[2025-10-10 21:42:16] 2025-10-11 01:41:43,870 | INFO     | 
[2025-10-10 21:42:16] 2025-10-11 01:41:43,886 | INFO     | architecture information:
[2025-10-10 21:42:16] 2025-10-11 01:41:43,894 | INFO     | executing command: cat /etc/os-release
[2025-10-10 21:42:16] 2025-10-11 01:41:43,949 | INFO     | cat /etc/os-release:
[2025-10-10 21:42:16] NAME="CentOS Linux"
[2025-10-10 21:42:16] VERSION="7 (Core)"
[2025-10-10 21:42:16] ID="centos"
[2025-10-10 21:42:16] ID_LIKE="rhel fedora"
[2025-10-10 21:42:16] VERSION_ID="7"
[2025-10-10 21:42:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 21:42:16] ANSI_COLOR="0;31"
[2025-10-10 21:42:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 21:42:16] HOME_URL="https://www.centos.org/"
[2025-10-10 21:42:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 21:42:16] 
[2025-10-10 21:42:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 21:42:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 21:42:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 21:42:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 21:42:16] 
[2025-10-10 21:42:16] 2025-10-11 01:41:43,949 | INFO     | ***************************************
[2025-10-10 21:42:16] 2025-10-11 01:41:44,453 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-10 21:42:16] 2025-10-11 01:41:44,597 | INFO     | sufficient remaining disk space (52304019456 B)
[2025-10-10 21:42:16] 2025-10-11 01:41:44,598 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 21:42:16] 2025-10-11 01:41:44,598 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 21:42:16] 2025-10-11 01:41:44,598 | INFO     | update_server=False
[2025-10-10 21:42:16] 2025-10-11 01:41:44,598 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 21:42:16] 2025-10-11 01:41:44,598 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 21:42:16] 2025-10-11 01:41:44,599 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 21:42:16] 2025-10-11 01:41:44,599 | INFO     | aborting loop
[2025-10-10 21:42:16] 2025-10-11 01:41:44,630 | INFO     | all job control threads have been joined
[2025-10-10 21:42:16] 2025-10-11 01:41:45,128 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 21:42:16] 2025-10-11 01:41:45,394 | INFO     | all data control threads have been joined
[2025-10-10 21:42:16] 2025-10-11 01:41:45,605 | INFO     | [job] job monitor thread has finished
[2025-10-10 21:42:16] 2025-10-11 01:41:45,628 | INFO     | [job] retrieve thread has finished
[2025-10-10 21:42:16] 2025-10-11 01:41:45,636 | INFO     | [job] control thread has finished
[2025-10-10 21:42:16] 2025-10-11 01:41:45,751 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 21:42:16] 2025-10-11 01:41:45,752 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 21:42:16] 2025-10-11 01:41:45,805 | INFO     | all payload control threads have been joined
[2025-10-10 21:42:16] 2025-10-11 01:41:45,963 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 21:42:16] 2025-10-11 01:41:46,003 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 21:42:16] 2025-10-11 01:41:46,004 | INFO     | [job] validate thread has finished
[2025-10-10 21:42:16] 2025-10-11 01:41:46,004 | INFO     | [data] copytool_in thread has finished
[2025-10-10 21:42:16] 2025-10-11 01:41:46,134 | INFO     | [job] queue monitor thread has finished
[2025-10-10 21:42:16] 2025-10-11 01:41:46,268 | INFO     | [payload] failed_post thread has finished
[2025-10-10 21:42:16] 2025-10-11 01:41:46,400 | INFO     | [data] control thread has finished
[2025-10-10 21:42:16] 2025-10-11 01:41:46,491 | INFO     | [payload] validate_post thread has finished
[2025-10-10 21:42:16] 2025-10-11 01:41:46,607 | INFO     | [data] copytool_out thread has finished
[2025-10-10 21:42:16] 2025-10-11 01:41:46,814 | INFO     | [payload] control thread has finished
[2025-10-10 21:42:16] 2025-10-11 01:41:47,502 | INFO     | [monitor] cgroup control has ended
[2025-10-10 21:42:16] 2025-10-11 01:41:48,017 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 21:42:16] 2025-10-11 01:41:52,072 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 21:42:16] 2025-10-11 01:41:53,546 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139817151076160)>', '<ExcThread(monitor, started 139816654059264)>']
[2025-10-10 21:42:16] 2025-10-11 01:41:58,579 | INFO     | all workflow threads have been joined
[2025-10-10 21:42:16] 2025-10-11 01:41:58,583 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 21:42:16] 2025-10-11 01:41:58,583 | INFO     | traces error code: 0
[2025-10-10 21:42:16] 2025-10-11 01:41:58,584 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 21:42:16] 2025-10-11 01:42:13,985 | INFO     | PID=1338522 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 21:42:16] 2025-10-11 01:42:13,985 | INFO     | .. there are 41 such processes running
[2025-10-10 21:42:16] 2025-10-11 01:42:13,986 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 21:42:16] 2025-10-11 01:42:13,986 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 21:42:16] 2025-10-11 01:42:13,986 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 21:42:16] 2025-10-11 01:42:13,986 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 21:42:16] 2025-10-11 01:42:13,987 | INFO     | [monitor] control thread has ended
[2025-10-10 21:42:16] 2025-10-11 01:42:14,668 [wrapper] ==== pilot stdout END ====
[2025-10-10 21:42:16] 2025-10-11 01:42:14,744 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 21:42:16] 2025-10-11 01:42:14,806 [wrapper] pilotpid: 1338522
[2025-10-10 21:42:16] 2025-10-11 01:42:14,850 [wrapper] Pilot exit status: 0
[2025-10-10 21:42:16] 2025-10-11 01:42:15,079 [wrapper] pandaids: 6837359089
[2025-10-10 21:42:16] 2025-10-11 01:42:15,224 [wrapper] cleanup supervisor_pilot 1271041 1338523
[2025-10-10 21:42:16] 2025-10-11 01:42:15,261 [wrapper] Test setup, not cleaning
[2025-10-10 21:42:16] 2025-10-11 01:42:15,303 [wrapper] apfmon messages muted
[2025-10-10 21:42:16] 2025-10-11 01:42:15,372 [wrapper] ==== wrapper stdout END ====
[2025-10-10 21:42:16] 2025-10-11 01:42:15,397 [wrapper] ==== wrapper stderr END ====
[2025-10-10 21:42:16]  *** Error codes and diagnostics ***
[2025-10-10 21:42:16]     "exeErrorCode": 0,
[2025-10-10 21:42:16]     "exeErrorDiag": "",
[2025-10-10 21:42:16]     "pilotErrorCode": 0,
[2025-10-10 21:42:16]     "pilotErrorDiag": "",
[2025-10-10 21:42:16]  *** Listing of results directory ***
[2025-10-10 21:42:16] total 419288
[2025-10-10 21:42:16] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 15:01 pilot3.tar.gz
[2025-10-10 21:42:16] -rwx------. 1 boincer umatlas     36292 Oct  9 15:08 runpilot2-wrapper.sh
[2025-10-10 21:42:16] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 15:08 queuedata.json
[2025-10-10 21:42:16] -rw-r--r--. 1 boincer umatlas       100 Oct 10 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 21:42:16] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 00:01 run_atlas
[2025-10-10 21:42:16] -rw-r--r--. 1 boincer umatlas       105 Oct 10 00:01 job.xml
[2025-10-10 21:42:16] -rw-r--r--. 2 boincer umatlas 219151843 Oct 10 00:01 EVNT.46676267._001024.pool.root.1
[2025-10-10 21:42:16] -rw-r--r--. 2 boincer umatlas    569675 Oct 10 00:01 input.tar.gz
[2025-10-10 21:42:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 00:01 start_atlas.sh
[2025-10-10 21:42:16] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 00:01 shared
[2025-10-10 21:42:16] -rw-r--r--. 1 boincer umatlas         0 Oct 10 00:01 boinc_lockfile
[2025-10-10 21:42:16] -rw-r--r--. 1 boincer umatlas      2549 Oct 10 00:01 pandaJob.out
[2025-10-10 21:42:16] -rw-------. 1 boincer umatlas    975454 Oct 10 00:03 agis_schedconf.cvmfs.json
[2025-10-10 21:42:16] drwx------. 5 boincer umatlas      4096 Oct 10 00:03 pilot3
[2025-10-10 21:42:16] -rw-------. 1 boincer umatlas 189068874 Oct 10 21:38 HITS.46676269._024769.pool.root.1
[2025-10-10 21:42:16] -rw-r--r--. 1 boincer umatlas       531 Oct 10 21:38 boinc_task_state.xml
[2025-10-10 21:42:16] -rw-r--r--. 1 boincer umatlas      6522 Oct 10 21:39 init_data.xml
[2025-10-10 21:42:16] -rw-------. 1 boincer umatlas      1038 Oct 10 21:40 memory_monitor_summary.json
[2025-10-10 21:42:16] -rw-------. 1 boincer umatlas   1560580 Oct 10 21:40 agis_ddmendpoints.agis.ALL.json
[2025-10-10 21:42:16] -rw-------. 1 boincer umatlas   1135499 Oct 10 21:40 log.46676269._024769.job.log.tgz.1
[2025-10-10 21:42:16] -rw-------. 1 boincer umatlas        95 Oct 10 21:41 pilot_heartbeat.json
[2025-10-10 21:42:16] -rw-------. 1 boincer umatlas      7820 Oct 10 21:41 heartbeat.json
[2025-10-10 21:42:16] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 21:41 boinc_mmap_file
[2025-10-10 21:42:16] -rw-r--r--. 1 boincer umatlas        28 Oct 10 21:41 wrapper_checkpoint.txt
[2025-10-10 21:42:16] -rw-------. 1 boincer umatlas       823 Oct 10 21:42 pilotlog.txt
[2025-10-10 21:42:16] -rw-------. 1 boincer umatlas   7482401 Oct 10 21:42 log.46676269._024769.job.log.1
[2025-10-10 21:42:16] -rw-------. 1 boincer umatlas       357 Oct 10 21:42 output.list
[2025-10-10 21:42:16] -rw-r--r--. 1 boincer umatlas       620 Oct 10 21:42 runtime_log
[2025-10-10 21:42:16] -rw-------. 1 boincer umatlas   8632320 Oct 10 21:42 result.tar.gz
[2025-10-10 21:42:16] -rw-r--r--. 1 boincer umatlas      8699 Oct 10 21:42 runtime_log.err
[2025-10-10 21:42:16] -rw-------. 1 boincer umatlas       657 Oct 10 21:42 54eLDmlABR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm9YOMDmtGiNbn.diag
[2025-10-10 21:42:16] -rw-r--r--. 1 boincer umatlas     21309 Oct 10 21:42 stderr.txt
[2025-10-10 21:42:16] HITS file was successfully produced:
[2025-10-10 21:42:16] -rw-------. 1 boincer umatlas 189068874 Oct 10 21:38 shared/HITS.pool.root.1
[2025-10-10 21:42:16]  *** Contents of shared directory: ***
[2025-10-10 21:42:16] total 407668
[2025-10-10 21:42:16] -rw-r--r--. 2 boincer umatlas 219151843 Oct 10 00:01 ATLAS.root_0
[2025-10-10 21:42:16] -rw-r--r--. 2 boincer umatlas    569675 Oct 10 00:01 input.tar.gz
[2025-10-10 21:42:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 00:01 start_atlas.sh
[2025-10-10 21:42:16] -rw-------. 1 boincer umatlas 189068874 Oct 10 21:38 HITS.pool.root.1
[2025-10-10 21:42:16] -rw-------. 1 boincer umatlas   8632320 Oct 10 21:42 result.tar.gz
21:42:17 (1329492): run_atlas exited; CPU time 81705.656431
21:42:17 (1329492): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN