Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:40:18 (836455): wrapper (7.7.26015): starting
20:40:18 (836455): wrapper: running run_atlas (--nthreads 12)
[2025-10-09 20:40:18] Arguments: --nthreads 12
[2025-10-09 20:40:18] Threads: 12
[2025-10-09 20:40:18] Checking for CVMFS
[2025-10-09 20:40:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 20:40:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 20:40:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 20:40:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 20:40:18] 2.13.2.0 135553 605 100308 151528 2 412 20633626 32503809 9302 16776704 0 11292232 99.964 1276870 50679 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-09 20:40:18] CVMFS is ok
[2025-10-09 20:40:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 20:40:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 20:40:18] Further information can be found at the LHC@home message board.
[2025-10-09 20:40:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 20:40:18] Checking for apptainer binary...
[2025-10-09 20:40:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 20:40:18] Running /usr/bin/apptainer --version
[2025-10-09 20:40:18] apptainer version 1.4.3-1.el9
[2025-10-09 20:40:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 20:40:18] c8-7-2.aglt2.org
[2025-10-09 20:40:18] apptainer works
[2025-10-09 20:40:19] Set ATHENA_PROC_NUMBER=12
[2025-10-09 20:40:19] Set ATHENA_CORE_NUMBER=12
[2025-10-09 20:40:19] Starting ATLAS job with PandaID=6837350019
[2025-10-09 20:40:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 21:14:47]  *** The last 200 lines of the pilot log: ***
[2025-10-09 21:14:47]  scope=mc23_13p6TeV
[2025-10-09 21:14:47]  status=None
[2025-10-09 21:14:47]  status_code=0
[2025-10-09 21:14:47]  storage_token=
[2025-10-09 21:14:47]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6837350019/log.46676269._021412.job.log.tgz.1
[2025-10-09 21:14:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/20/log.46676269._021412.job.log.tgz.1
[2025-10-09 21:14:47]  workdir=None
[2025-10-09 21:14:47] ]
[2025-10-09 21:14:47] 2025-10-10 01:14:08,003 | INFO     | transferring file log.46676269._021412.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6837350019/log.46676269._021412.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-09 21:14:47] 2025-10-10 01:14:08,003 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6837350019/log.46676269._021412.job.log.tgz.1 /tmp/boinchome/slots/2/log.46676269._021412.job
[2025-10-09 21:14:47] 2025-10-10 01:14:08,023 | INFO     | adding to output.list: log.46676269._021412.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/20/log.46676269._021412.job.log.tg
[2025-10-09 21:14:47] 2025-10-10 01:14:08,023 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-09 21:14:47] 2025-10-10 01:14:08,023 | INFO     | summary of transferred files:
[2025-10-09 21:14:47] 2025-10-10 01:14:08,023 | INFO     |  -- lfn=log.46676269._021412.job.log.tgz.1, status_code=0, status=transferred
[2025-10-09 21:14:47] 2025-10-10 01:14:08,023 | INFO     | stage-out finished correctly
[2025-10-09 21:14:47] 2025-10-10 01:14:08,237 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-09 21:14:47] 2025-10-10 01:14:08,667 | WARNING  | process 847254 can no longer be monitored (due to stat problems) - aborting
[2025-10-09 21:14:47] 2025-10-10 01:14:08,668 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6837350019/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 21:14:47] 2025-10-10 01:14:09,070 | INFO     | number of running child processes to parent process 847254: 1
[2025-10-09 21:14:47] 2025-10-10 01:14:09,071 | INFO     | maximum number of monitored processes: 6
[2025-10-09 21:14:47] 2025-10-10 01:14:09,597 | INFO     | time since job start (2021s) is within the limit (172800.0s)
[2025-10-09 21:14:47] 2025-10-10 01:14:09,925 | INFO     | job 6837350019 has state=finished
[2025-10-09 21:14:47] 2025-10-10 01:14:09,925 | INFO     | preparing for final server update for job 6837350019 in state='finished'
[2025-10-09 21:14:47] 2025-10-10 01:14:09,926 | INFO     | this job has now completed (state=finished)
[2025-10-09 21:14:47] 2025-10-10 01:14:09,926 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-09 21:14:47] 2025-10-10 01:14:09,926 | INFO     | log transfer has been attempted: DONE
[2025-10-09 21:14:47] 2025-10-10 01:14:09,926 | INFO     | job 6837350019 has finished - writing final server update
[2025-10-09 21:14:47] 2025-10-10 01:14:09,926 | INFO     | total number of processed events: 400 (read)
[2025-10-09 21:14:47] 2025-10-10 01:14:09,927 | INFO     | executing command: lscpu
[2025-10-09 21:14:47] 2025-10-10 01:14:09,992 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-09 21:14:47] 2025-10-10 01:14:11,574 | INFO     | monitor loop #151: job 0:6837350019 is in state 'finished'
[2025-10-09 21:14:47] 2025-10-10 01:14:11,574 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 21:14:47] 2025-10-10 01:14:11,602 | INFO     | time since job start (2023s) is within the limit (172800.0s)
[2025-10-09 21:14:47] 2025-10-10 01:14:13,608 | INFO     | time since job start (2025s) is within the limit (172800.0s)
[2025-10-09 21:14:47] 2025-10-10 01:14:13,872 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-09 21:14:47] 2025-10-10 01:14:13,877 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3679.8276875
[2025-10-09 21:14:47] 2025-10-10 01:14:13,891 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6837350019/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 21:14:47] 2025-10-10 01:14:13,891 | INFO     | extracted standard info from prmon json
[2025-10-09 21:14:47] 2025-10-10 01:14:13,891 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 21:14:47] 2025-10-10 01:14:13,891 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 21:14:47] 2025-10-10 01:14:13,892 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 21:14:47] 2025-10-10 01:14:13,892 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 21:14:47] 2025-10-10 01:14:13,892 | INFO     | fitting pss+swap vs Time
[2025-10-09 21:14:47] 2025-10-10 01:14:13,893 | INFO     | sum of square deviations: 5441962.5
[2025-10-09 21:14:47] 2025-10-10 01:14:13,893 | INFO     | sum of deviations: 212244955.49999994
[2025-10-09 21:14:47] 2025-10-10 01:14:13,893 | INFO     | mean x: 1760057920.5
[2025-10-09 21:14:47] 2025-10-10 01:14:13,893 | INFO     | mean y: 2411441.0384615385
[2025-10-09 21:14:47] 2025-10-10 01:14:13,893 | INFO     | -- intersect: -68642570036.49743
[2025-10-09 21:14:47] 2025-10-10 01:14:13,893 | INFO     | intersect: -68642570036.49743
[2025-10-09 21:14:47] 2025-10-10 01:14:13,893 | INFO     | chi2: 0.00114814234134848
[2025-10-09 21:14:47] 2025-10-10 01:14:13,893 | INFO     | -- intersect: -68642570036.49743
[2025-10-09 21:14:47] 2025-10-10 01:14:13,893 | INFO     | current memory leak: 39.00 B/s (using 26 data points, chi2=0.00)
[2025-10-09 21:14:47] 2025-10-10 01:14:13,893 | INFO     | could have reported an average CPU frequency of 3694 MHz (5 samples)
[2025-10-09 21:14:47] 2025-10-10 01:14:13,893 | INFO     | ..............................
[2025-10-09 21:14:47] 2025-10-10 01:14:13,893 | INFO     | . Timing measurements:
[2025-10-09 21:14:47] 2025-10-10 01:14:13,893 | INFO     | . get job = 0 s
[2025-10-09 21:14:47] 2025-10-10 01:14:13,893 | INFO     | . initial setup = 2 s
[2025-10-09 21:14:47] 2025-10-10 01:14:13,893 | INFO     | . payload setup = 5 s
[2025-10-09 21:14:47] 2025-10-10 01:14:13,893 | INFO     | . stage-in = 0 s
[2025-10-09 21:14:47] 2025-10-10 01:14:13,894 | INFO     | . payload execution = 1995 s
[2025-10-09 21:14:47] 2025-10-10 01:14:13,894 | INFO     | . stage-out = 0 s
[2025-10-09 21:14:47] 2025-10-10 01:14:13,894 | INFO     | . log creation = 0 s
[2025-10-09 21:14:47] 2025-10-10 01:14:13,894 | INFO     | ..............................
[2025-10-09 21:14:47] 2025-10-10 01:14:14,373 | INFO     | 
[2025-10-09 21:14:47] 2025-10-10 01:14:14,373 | INFO     | job summary report
[2025-10-09 21:14:47] 2025-10-10 01:14:14,373 | INFO     | --------------------------------------------------
[2025-10-09 21:14:47] 2025-10-10 01:14:14,373 | INFO     | PanDA job id: 6837350019
[2025-10-09 21:14:47] 2025-10-10 01:14:14,373 | INFO     | task id: 46676269
[2025-10-09 21:14:47] 2025-10-10 01:14:14,373 | INFO     | errors: (none)
[2025-10-09 21:14:47] 2025-10-10 01:14:14,373 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 21:14:47] 2025-10-10 01:14:14,373 | INFO     | pilot state: finished 
[2025-10-09 21:14:47] 2025-10-10 01:14:14,373 | INFO     | transexitcode: 0
[2025-10-09 21:14:47] 2025-10-10 01:14:14,373 | INFO     | exeerrorcode: 0
[2025-10-09 21:14:47] 2025-10-10 01:14:14,373 | INFO     | exeerrordiag: 
[2025-10-09 21:14:47] 2025-10-10 01:14:14,374 | INFO     | exitcode: 0
[2025-10-09 21:14:47] 2025-10-10 01:14:14,374 | INFO     | exitmsg: OK
[2025-10-09 21:14:47] 2025-10-10 01:14:14,374 | INFO     | cpuconsumptiontime: 20229 s
[2025-10-09 21:14:47] 2025-10-10 01:14:14,374 | INFO     | nevents: 400
[2025-10-09 21:14:47] 2025-10-10 01:14:14,374 | INFO     | neventsw: 0
[2025-10-09 21:14:47] 2025-10-10 01:14:14,374 | INFO     | pid: 847254
[2025-10-09 21:14:47] 2025-10-10 01:14:14,374 | INFO     | pgrp: 847254
[2025-10-09 21:14:47] 2025-10-10 01:14:14,374 | INFO     | corecount: 12
[2025-10-09 21:14:47] 2025-10-10 01:14:14,374 | INFO     | event service: False
[2025-10-09 21:14:47] 2025-10-10 01:14:14,374 | INFO     | sizes: {0: 2348855, 4: 2349117, 11: 2349145, 2005: 2383145, 2011: 2383315}
[2025-10-09 21:14:47] 2025-10-10 01:14:14,374 | INFO     | --------------------------------------------------
[2025-10-09 21:14:47] 2025-10-10 01:14:14,374 | INFO     | 
[2025-10-09 21:14:47] 2025-10-10 01:14:14,374 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-09 21:14:47] 2025-10-10 01:14:14,392 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 21:14:47] 2025-10-10 01:14:14,393 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 21:14:47] 2025-10-10 01:14:14,393 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 21:14:47] 2025-10-10 01:14:14,393 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 21:14:47] 2025-10-10 01:14:14,393 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 21:14:47] 2025-10-10 01:14:14,393 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 21:14:47] 2025-10-10 01:14:14,393 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 21:14:47] 2025-10-10 01:14:14,393 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 21:14:47] 2025-10-10 01:14:14,393 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 21:14:47] 2025-10-10 01:14:14,393 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 21:14:47] 2025-10-10 01:14:14,393 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 21:14:47] 2025-10-10 01:14:14,393 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 21:14:47] 2025-10-10 01:14:14,393 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 21:14:47] 2025-10-10 01:14:14,393 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 21:14:47] 2025-10-10 01:14:14,393 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 21:14:47] 2025-10-10 01:14:14,393 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 21:14:47] 2025-10-10 01:14:14,393 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 21:14:47] 2025-10-10 01:14:14,393 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 21:14:47] 2025-10-10 01:14:14,393 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 21:14:47] 2025-10-10 01:14:14,394 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 21:14:47] 2025-10-10 01:14:14,394 | INFO     | job 6837350019 has completed (purged errors)
[2025-10-09 21:14:47] 2025-10-10 01:14:14,394 | INFO     | overall cleanup function is called
[2025-10-09 21:14:47] 2025-10-10 01:14:15,402 | INFO     | --- collectZombieJob: --- 10, [847254]
[2025-10-09 21:14:47] 2025-10-10 01:14:15,402 | INFO     | zombie collector waiting for pid 847254
[2025-10-09 21:14:47] 2025-10-10 01:14:15,402 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 21:14:47] 2025-10-10 01:14:15,402 | INFO     | collected zombie processes
[2025-10-09 21:14:47] 2025-10-10 01:14:15,402 | INFO     | will attempt to kill all subprocesses of pid=847254
[2025-10-09 21:14:47] 2025-10-10 01:14:15,779 | INFO     | process IDs to be killed: [847254] (in reverse order)
[2025-10-09 21:14:47] 2025-10-10 01:14:15,876 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 21:14:47] 2025-10-10 01:14:15,876 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 21:14:47] 2025-10-10 01:14:15,891 | INFO     | did not find any defunct processes belonging to 847254
[2025-10-09 21:14:47] 2025-10-10 01:14:15,903 | INFO     | did not find any defunct processes belonging to 847254
[2025-10-09 21:14:47] 2025-10-10 01:14:15,903 | INFO     | ready for new job
[2025-10-09 21:14:47] 2025-10-10 01:14:15,903 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 21:14:47] 2025-10-10 01:14:15,904 | INFO     | ***************************************
[2025-10-09 21:14:47] 2025-10-10 01:14:15,904 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 21:14:47] 2025-10-10 01:14:15,904 | INFO     | ***************************************
[2025-10-09 21:14:47] 2025-10-10 01:14:15,904 | INFO     | 
[2025-10-09 21:14:47] 2025-10-10 01:14:15,920 | INFO     | architecture information:
[2025-10-09 21:14:47] 2025-10-10 01:14:15,920 | INFO     | executing command: cat /etc/os-release
[2025-10-09 21:14:47] 2025-10-10 01:14:15,935 | INFO     | cat /etc/os-release:
[2025-10-09 21:14:47] NAME="CentOS Linux"
[2025-10-09 21:14:47] VERSION="7 (Core)"
[2025-10-09 21:14:47] ID="centos"
[2025-10-09 21:14:47] ID_LIKE="rhel fedora"
[2025-10-09 21:14:47] VERSION_ID="7"
[2025-10-09 21:14:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 21:14:47] ANSI_COLOR="0;31"
[2025-10-09 21:14:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 21:14:47] HOME_URL="https://www.centos.org/"
[2025-10-09 21:14:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 21:14:47] 
[2025-10-09 21:14:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 21:14:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 21:14:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 21:14:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 21:14:47] 
[2025-10-09 21:14:47] 2025-10-10 01:14:15,935 | INFO     | ***************************************
[2025-10-09 21:14:47] 2025-10-10 01:14:16,438 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-09 21:14:47] 2025-10-10 01:14:16,456 | INFO     | sufficient remaining disk space (91230306304 B)
[2025-10-09 21:14:47] 2025-10-10 01:14:16,456 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 21:14:47] 2025-10-10 01:14:16,456 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 21:14:47] 2025-10-10 01:14:16,456 | INFO     | update_server=False
[2025-10-09 21:14:47] 2025-10-10 01:14:16,456 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 21:14:47] 2025-10-10 01:14:16,457 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 21:14:47] 2025-10-10 01:14:16,561 | INFO     | all data control threads have been joined
[2025-10-09 21:14:47] 2025-10-10 01:14:16,579 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-09 21:14:47] 2025-10-10 01:14:16,580 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-09 21:14:47] 2025-10-10 01:14:16,580 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 21:14:47] 2025-10-10 01:14:16,580 | INFO     | will abort loop
[2025-10-09 21:14:47] 2025-10-10 01:14:16,898 | INFO     | all job control threads have been joined
[2025-10-09 21:14:47] 2025-10-10 01:14:17,334 | INFO     | all payload control threads have been joined
[2025-10-09 21:14:47] 2025-10-10 01:14:17,462 | INFO     | [job] retrieve thread has finished
[2025-10-09 21:14:47] 2025-10-10 01:14:17,473 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 21:14:47] 2025-10-10 01:14:17,567 | INFO     | [data] control thread has finished
[2025-10-09 21:14:47] 2025-10-10 01:14:17,585 | INFO     | [job] job monitor thread has finished
[2025-10-09 21:14:47] 2025-10-10 01:14:17,788 | INFO     | [data] copytool_in thread has finished
[2025-10-09 21:14:47] 2025-10-10 01:14:17,792 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 21:14:47] 2025-10-10 01:14:17,904 | INFO     | [job] control thread has finished
[2025-10-09 21:14:47] 2025-10-10 01:14:18,137 | INFO     | [payload] validate_post thread has finished
[2025-10-09 21:14:47] 2025-10-10 01:14:18,340 | INFO     | [payload] control thread has finished
[2025-10-09 21:14:47] 2025-10-10 01:14:18,423 | INFO     | [job] validate thread has finished
[2025-10-09 21:14:47] 2025-10-10 01:14:18,459 | INFO     | [data] copytool_out thread has finished
[2025-10-09 21:14:47] 2025-10-10 01:14:18,488 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 21:14:47] 2025-10-10 01:14:18,565 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 21:14:47] 2025-10-10 01:14:18,805 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 21:14:47] 2025-10-10 01:14:18,805 | INFO     | [payload] failed_post thread has finished
[2025-10-09 21:14:47] 2025-10-10 01:14:18,958 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 21:14:47] 2025-10-10 01:14:19,964 | INFO     | [job] queue monitor thread has finished
[2025-10-09 21:14:47] 2025-10-10 01:14:22,810 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 21:14:47] 2025-10-10 01:14:31,275 | INFO     | [monitor] cgroup control has ended
[2025-10-09 21:14:47] 2025-10-10 01:14:31,408 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140597946459968)>', '<ExcThread(monitor, started 140597096609536)>']
[2025-10-09 21:14:47] 2025-10-10 01:14:36,427 | INFO     | all workflow threads have been joined
[2025-10-09 21:14:47] 2025-10-10 01:14:36,427 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 21:14:47] 2025-10-10 01:14:36,428 | INFO     | traces error code: 0
[2025-10-09 21:14:47] 2025-10-10 01:14:36,428 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 21:14:47] 2025-10-10 01:14:47,168 | INFO     | PID=840650 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-09 21:14:47] 2025-10-10 01:14:47,169 | INFO     | .. there are 10 such processes running
[2025-10-09 21:14:47] 2025-10-10 01:14:47,169 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 21:14:47] 2025-10-10 01:14:47,169 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 21:14:47] 2025-10-10 01:14:47,169 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 21:14:47] 2025-10-10 01:14:47,169 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 21:14:47] 2025-10-10 01:14:47,169 | INFO     | [monitor] control thread has ended
[2025-10-09 21:14:47] 2025-10-10 01:14:47,299 [wrapper] ==== pilot stdout END ====
[2025-10-09 21:14:47] 2025-10-10 01:14:47,302 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 21:14:47] 2025-10-10 01:14:47,305 [wrapper] pilotpid: 840650
[2025-10-09 21:14:47] 2025-10-10 01:14:47,308 [wrapper] Pilot exit status: 0
[2025-10-09 21:14:47] 2025-10-10 01:14:47,319 [wrapper] pandaids: 6837350019
[2025-10-09 21:14:47] 2025-10-10 01:14:47,416 [wrapper] cleanup supervisor_pilot 1069974 840651
[2025-10-09 21:14:47] 2025-10-10 01:14:47,419 [wrapper] Test setup, not cleaning
[2025-10-09 21:14:47] 2025-10-10 01:14:47,421 [wrapper] apfmon messages muted
[2025-10-09 21:14:47] 2025-10-10 01:14:47,424 [wrapper] ==== wrapper stdout END ====
[2025-10-09 21:14:47] 2025-10-10 01:14:47,427 [wrapper] ==== wrapper stderr END ====
[2025-10-09 21:14:47]  *** Error codes and diagnostics ***
[2025-10-09 21:14:47]     "exeErrorCode": 0,
[2025-10-09 21:14:47]     "exeErrorDiag": "",
[2025-10-09 21:14:47]     "pilotErrorCode": 0,
[2025-10-09 21:14:47]     "pilotErrorDiag": "",
[2025-10-09 21:14:47]  *** Listing of results directory ***
[2025-10-09 21:14:47] total 413752
[2025-10-09 21:14:47] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 11:29 pilot3.tar.gz
[2025-10-09 21:14:47] -rwx------. 1 boincer umatlas     36292 Oct  9 11:30 runpilot2-wrapper.sh
[2025-10-09 21:14:47] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 11:30 queuedata.json
[2025-10-09 21:14:47] -rw-r--r--. 1 boincer umatlas       100 Oct  9 20:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 21:14:47] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  9 20:40 run_atlas
[2025-10-09 21:14:47] -rw-r--r--. 1 boincer umatlas       105 Oct  9 20:40 job.xml
[2025-10-09 21:14:47] -rw-r--r--. 2 boincer umatlas 219858615 Oct  9 20:40 EVNT.46676267._000893.pool.root.1
[2025-10-09 21:14:47] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 20:40 start_atlas.sh
[2025-10-09 21:14:47] drwxrwx--x. 2 boincer umatlas      4096 Oct  9 20:40 shared
[2025-10-09 21:14:47] -rw-r--r--. 2 boincer umatlas    569680 Oct  9 20:40 input.tar.gz
[2025-10-09 21:14:47] -rw-r--r--. 1 boincer umatlas         0 Oct  9 20:40 boinc_lockfile
[2025-10-09 21:14:47] -rw-r--r--. 1 boincer umatlas      2549 Oct  9 20:40 pandaJob.out
[2025-10-09 21:14:47] -rw-------. 1 boincer umatlas    975454 Oct  9 20:40 agis_schedconf.cvmfs.json
[2025-10-09 21:14:47] -rw-------. 1 boincer umatlas   1560580 Oct  9 20:40 agis_ddmendpoints.agis.ALL.json
[2025-10-09 21:14:47] drwx------. 5 boincer umatlas      4096 Oct  9 20:40 pilot3
[2025-10-09 21:14:47] -rw-r--r--. 1 boincer umatlas      7161 Oct  9 21:10 init_data.xml
[2025-10-09 21:14:47] -rw-r--r--. 1 boincer umatlas       529 Oct  9 21:13 boinc_task_state.xml
[2025-10-09 21:14:47] -rw-------. 1 boincer umatlas 198579877 Oct  9 21:13 HITS.46676269._021412.pool.root.1
[2025-10-09 21:14:47] -rw-------. 1 boincer umatlas      1028 Oct  9 21:14 memory_monitor_summary.json
[2025-10-09 21:14:47] -rw-------. 1 boincer umatlas    343224 Oct  9 21:14 log.46676269._021412.job.log.tgz.1
[2025-10-09 21:14:47] -rw-------. 1 boincer umatlas        95 Oct  9 21:14 pilot_heartbeat.json
[2025-10-09 21:14:47] -rw-------. 1 boincer umatlas      7771 Oct  9 21:14 heartbeat.json
[2025-10-09 21:14:47] -rw-r--r--. 1 boincer umatlas      8192 Oct  9 21:14 boinc_mmap_file
[2025-10-09 21:14:47] -rw-r--r--. 1 boincer umatlas        27 Oct  9 21:14 wrapper_checkpoint.txt
[2025-10-09 21:14:47] -rw-------. 1 boincer umatlas       822 Oct  9 21:14 pilotlog.txt
[2025-10-09 21:14:47] -rw-------. 1 boincer umatlas    327864 Oct  9 21:14 log.46676269._021412.job.log.1
[2025-10-09 21:14:47] -rw-------. 1 boincer umatlas       357 Oct  9 21:14 output.list
[2025-10-09 21:14:47] -rw-r--r--. 1 boincer umatlas       620 Oct  9 21:14 runtime_log
[2025-10-09 21:14:47] -rw-------. 1 boincer umatlas    686080 Oct  9 21:14 result.tar.gz
[2025-10-09 21:14:47] -rw-r--r--. 1 boincer umatlas      8695 Oct  9 21:14 runtime_log.err
[2025-10-09 21:14:47] -rw-------. 1 boincer umatlas       647 Oct  9 21:14 AVELDmYm7Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzZaNDmxsoAWm.diag
[2025-10-09 21:14:47] -rw-r--r--. 1 boincer umatlas     21884 Oct  9 21:14 stderr.txt
[2025-10-09 21:14:47] HITS file was successfully produced:
[2025-10-09 21:14:47] -rw-------. 1 boincer umatlas 198579877 Oct  9 21:13 shared/HITS.pool.root.1
[2025-10-09 21:14:47]  *** Contents of shared directory: ***
[2025-10-09 21:14:47] total 409892
[2025-10-09 21:14:47] -rw-r--r--. 2 boincer umatlas 219858615 Oct  9 20:40 ATLAS.root_0
[2025-10-09 21:14:47] -rw-r--r--. 2 boincer umatlas     15120 Oct  9 20:40 start_atlas.sh
[2025-10-09 21:14:47] -rw-r--r--. 2 boincer umatlas    569680 Oct  9 20:40 input.tar.gz
[2025-10-09 21:14:47] -rw-------. 1 boincer umatlas 198579877 Oct  9 21:13 HITS.pool.root.1
[2025-10-09 21:14:47] -rw-------. 1 boincer umatlas    686080 Oct  9 21:14 result.tar.gz
21:14:48 (836455): run_atlas exited; CPU time 20273.738165
21:14:48 (836455): called boinc_finish(0)

</stderr_txt>
]]>

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