Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
00:22:40 (34448): wrapper (7.7.26015): starting
00:22:40 (34448): wrapper: running run_atlas (--nthreads 4)
[2025-10-10 00:22:40] Arguments: --nthreads 4
[2025-10-10 00:22:40] Threads: 4
[2025-10-10 00:22:40] Checking for CVMFS
[2025-10-10 00:22:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 00:22:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 00:22:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 00:22:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 00:22:40] 2.13.2.0 600183 562 56844 151528 1 186 4405870 6144000 753 130560 0 2733710 99.998 22685 2229 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-10 00:22:40] CVMFS is ok
[2025-10-10 00:22:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 00:22:40] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-10 00:22:40] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-10 00:22:40] Further information can be found at the LHC@home message board.
[2025-10-10 00:22:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 00:22:40] Checking for apptainer binary...
[2025-10-10 00:22:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 00:22:40] Running /usr/bin/apptainer --version
[2025-10-10 00:22:40] apptainer version 1.4.2
[2025-10-10 00:22:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 00:22:40] a100-garage
[2025-10-10 00:22:40] apptainer works
[2025-10-10 00:22:40] Set ATHENA_PROC_NUMBER=4
[2025-10-10 00:22:40] Set ATHENA_CORE_NUMBER=4
[2025-10-10 00:22:40] Starting ATLAS job with PandaID=6837345961
[2025-10-10 00:22:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ian/BOINC/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 01:42:00]  *** The last 200 lines of the pilot log: ***
[2025-10-10 01:42:00]  is_altstaged=None
[2025-10-10 01:42:00]  is_tar=False
[2025-10-10 01:42:00]  lfn=log.46676269._019997.job.log.tgz.1
[2025-10-10 01:42:00]  mtime=0
[2025-10-10 01:42:00]  protocol_id=None
[2025-10-10 01:42:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-10 01:42:00]  replicas=None
[2025-10-10 01:42:00]  scope=mc23_13p6TeV
[2025-10-10 01:42:00]  status=None
[2025-10-10 01:42:00]  status_code=0
[2025-10-10 01:42:00]  storage_token=
[2025-10-10 01:42:00]  surl=/home/ian/BOINC/slots/4/PanDA_Pilot-6837345961/log.46676269._019997.job.log.tgz.1
[2025-10-10 01:42:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b6/4e/log.46676269._019997.job.log.tgz.1
[2025-10-10 01:42:00]  workdir=None
[2025-10-10 01:42:00] ]
[2025-10-10 01:42:00] 2025-10-10 01:40:51,439 | INFO     | transferring file log.46676269._019997.job.log.tgz.1 from /home/ian/BOINC/slots/4/PanDA_Pilot-6837345961/log.46676269._019997.job.log.tgz.1 to /home/ian/BOINC/slot
[2025-10-10 01:42:00] 2025-10-10 01:40:51,439 | INFO     | executing command: /usr/bin/env mv /home/ian/BOINC/slots/4/PanDA_Pilot-6837345961/log.46676269._019997.job.log.tgz.1 /home/ian/BOINC/slots/4/log.46676269._019997.j
[2025-10-10 01:42:00] 2025-10-10 01:40:51,452 | INFO     | adding to output.list: log.46676269._019997.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b6/4e/log.46676269._019997.job.log.tg
[2025-10-10 01:42:00] 2025-10-10 01:40:51,453 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 01:42:00] 2025-10-10 01:40:51,453 | INFO     | summary of transferred files:
[2025-10-10 01:42:00] 2025-10-10 01:40:51,453 | INFO     |  -- lfn=log.46676269._019997.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 01:42:00] 2025-10-10 01:40:51,453 | INFO     | stage-out finished correctly
[2025-10-10 01:42:00] 2025-10-10 01:40:53,087 | INFO     | time since job start (4685s) is within the limit (172800.0s)
[2025-10-10 01:42:00] 2025-10-10 01:40:53,110 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 01:42:00] 2025-10-10 01:40:53,142 | INFO     | job 6837345961 has state=finished
[2025-10-10 01:42:00] 2025-10-10 01:40:53,142 | INFO     | preparing for final server update for job 6837345961 in state='finished'
[2025-10-10 01:42:00] 2025-10-10 01:40:53,143 | INFO     | this job has now completed (state=finished)
[2025-10-10 01:42:00] 2025-10-10 01:40:53,143 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 01:42:00] 2025-10-10 01:40:53,143 | INFO     | log transfer has been attempted: DONE
[2025-10-10 01:42:00] 2025-10-10 01:40:53,143 | INFO     | job 6837345961 has finished - writing final server update
[2025-10-10 01:42:00] 2025-10-10 01:40:53,143 | INFO     | total number of processed events: 400 (read)
[2025-10-10 01:42:00] 2025-10-10 01:40:53,144 | INFO     | executing command: lscpu
[2025-10-10 01:42:00] 2025-10-10 01:40:53,171 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 01:42:00] 2025-10-10 01:40:53,891 | INFO     | monitor loop #357: job 0:6837345961 is in state 'finished'
[2025-10-10 01:42:00] 2025-10-10 01:40:53,891 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 01:42:00] 2025-10-10 01:40:55,092 | INFO     | time since job start (4687s) is within the limit (172800.0s)
[2025-10-10 01:42:00] 2025-10-10 01:40:55,421 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 01:42:00] 2025-10-10 01:40:55,424 | INFO     | found 24 cores (24 cores per socket, 1 socket) HT, CPU MHz: 3450.553604166667
[2025-10-10 01:42:00] 2025-10-10 01:40:55,428 | INFO     | using path: /home/ian/BOINC/slots/4/PanDA_Pilot-6837345961/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 01:42:00] 2025-10-10 01:40:55,428 | INFO     | extracted standard info from prmon json
[2025-10-10 01:42:00] 2025-10-10 01:40:55,428 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 01:42:00] 2025-10-10 01:40:55,428 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 01:42:00] 2025-10-10 01:40:55,428 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 01:42:00] 2025-10-10 01:40:55,428 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 01:42:00] 2025-10-10 01:40:55,429 | INFO     | fitting pss+swap vs Time
[2025-10-10 01:42:00] 2025-10-10 01:40:55,429 | INFO     | sum of square deviations: 106336877.5
[2025-10-10 01:42:00] 2025-10-10 01:40:55,429 | INFO     | sum of deviations: -2893103486.0
[2025-10-10 01:42:00] 2025-10-10 01:40:55,430 | INFO     | mean x: 1760058198.5
[2025-10-10 01:42:00] 2025-10-10 01:40:55,430 | INFO     | mean y: 2394686.5142857144
[2025-10-10 01:42:00] 2025-10-10 01:40:55,430 | INFO     | -- intersect: 47888232876.96923
[2025-10-10 01:42:00] 2025-10-10 01:40:55,430 | INFO     | intersect: 47888232876.96923
[2025-10-10 01:42:00] 2025-10-10 01:40:55,430 | INFO     | chi2: 0.013145744545707706
[2025-10-10 01:42:00] 2025-10-10 01:40:55,430 | INFO     | -- intersect: 47888232876.96923
[2025-10-10 01:42:00] 2025-10-10 01:40:55,430 | INFO     | current memory leak: -27.21 B/s (using 70 data points, chi2=0.01)
[2025-10-10 01:42:00] 2025-10-10 01:40:55,430 | INFO     | could have reported an average CPU frequency of 3578 MHz (6 samples)
[2025-10-10 01:42:00] 2025-10-10 01:40:55,430 | INFO     | ..............................
[2025-10-10 01:42:00] 2025-10-10 01:40:55,430 | INFO     | . Timing measurements:
[2025-10-10 01:42:00] 2025-10-10 01:40:55,430 | INFO     | . get job = 0 s
[2025-10-10 01:42:00] 2025-10-10 01:40:55,430 | INFO     | . initial setup = 1 s
[2025-10-10 01:42:00] 2025-10-10 01:40:55,430 | INFO     | . payload setup = 3 s
[2025-10-10 01:42:00] 2025-10-10 01:40:55,430 | INFO     | . stage-in = 0 s
[2025-10-10 01:42:00] 2025-10-10 01:40:55,430 | INFO     | . payload execution = 4661 s
[2025-10-10 01:42:00] 2025-10-10 01:40:55,430 | INFO     | . stage-out = 0 s
[2025-10-10 01:42:00] 2025-10-10 01:40:55,430 | INFO     | . log creation = 0 s
[2025-10-10 01:42:00] 2025-10-10 01:40:55,430 | INFO     | ..............................
[2025-10-10 01:42:00] 2025-10-10 01:40:55,573 | INFO     | 
[2025-10-10 01:42:00] 2025-10-10 01:40:55,573 | INFO     | job summary report
[2025-10-10 01:42:00] 2025-10-10 01:40:55,573 | INFO     | --------------------------------------------------
[2025-10-10 01:42:00] 2025-10-10 01:40:55,573 | INFO     | PanDA job id: 6837345961
[2025-10-10 01:42:00] 2025-10-10 01:40:55,573 | INFO     | task id: 46676269
[2025-10-10 01:42:00] 2025-10-10 01:40:55,573 | INFO     | errors: (none)
[2025-10-10 01:42:00] 2025-10-10 01:40:55,573 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 01:42:00] 2025-10-10 01:40:55,573 | INFO     | pilot state: finished 
[2025-10-10 01:42:00] 2025-10-10 01:40:55,573 | INFO     | transexitcode: 0
[2025-10-10 01:42:00] 2025-10-10 01:40:55,573 | INFO     | exeerrorcode: 0
[2025-10-10 01:42:00] 2025-10-10 01:40:55,573 | INFO     | exeerrordiag: 
[2025-10-10 01:42:00] 2025-10-10 01:40:55,573 | INFO     | exitcode: 0
[2025-10-10 01:42:00] 2025-10-10 01:40:55,573 | INFO     | exitmsg: OK
[2025-10-10 01:42:00] 2025-10-10 01:40:55,573 | INFO     | cpuconsumptiontime: 18100 s
[2025-10-10 01:42:00] 2025-10-10 01:40:55,573 | INFO     | nevents: 400
[2025-10-10 01:42:00] 2025-10-10 01:40:55,573 | INFO     | neventsw: 0
[2025-10-10 01:42:00] 2025-10-10 01:40:55,573 | INFO     | pid: 61499
[2025-10-10 01:42:00] 2025-10-10 01:40:55,573 | INFO     | pgrp: 61499
[2025-10-10 01:42:00] 2025-10-10 01:40:55,573 | INFO     | corecount: 4
[2025-10-10 01:42:00] 2025-10-10 01:40:55,573 | INFO     | event service: False
[2025-10-10 01:42:00] 2025-10-10 01:40:55,573 | INFO     | sizes: {0: 2348856, 2: 2349118, 10: 2349146, 4668: 2375376, 4669: 2384376, 4671: 2384432, 4673: 2384754}
[2025-10-10 01:42:00] 2025-10-10 01:40:55,574 | INFO     | --------------------------------------------------
[2025-10-10 01:42:00] 2025-10-10 01:40:55,574 | INFO     | 
[2025-10-10 01:42:00] 2025-10-10 01:40:55,574 | INFO     | executing command: ls -lF /home/ian/BOINC/slots/4
[2025-10-10 01:42:00] 2025-10-10 01:40:55,589 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 01:42:00] 2025-10-10 01:40:55,590 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 01:42:00] 2025-10-10 01:40:55,590 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 01:42:00] 2025-10-10 01:40:55,590 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 01:42:00] 2025-10-10 01:40:55,590 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 01:42:00] 2025-10-10 01:40:55,590 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 01:42:00] 2025-10-10 01:40:55,590 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 01:42:00] 2025-10-10 01:40:55,590 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 01:42:00] 2025-10-10 01:40:55,590 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 01:42:00] 2025-10-10 01:40:55,590 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 01:42:00] 2025-10-10 01:40:55,590 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 01:42:00] 2025-10-10 01:40:55,590 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 01:42:00] 2025-10-10 01:40:55,590 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 01:42:00] 2025-10-10 01:40:55,590 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 01:42:00] 2025-10-10 01:40:55,590 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 01:42:00] 2025-10-10 01:40:55,590 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 01:42:00] 2025-10-10 01:40:55,590 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 01:42:00] 2025-10-10 01:40:55,590 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 01:42:00] 2025-10-10 01:40:55,590 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 01:42:00] 2025-10-10 01:40:55,590 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 01:42:00] 2025-10-10 01:40:55,590 | INFO     | job 6837345961 has completed (purged errors)
[2025-10-10 01:42:00] 2025-10-10 01:40:55,590 | INFO     | overall cleanup function is called
[2025-10-10 01:42:00] 2025-10-10 01:40:56,597 | INFO     | --- collectZombieJob: --- 10, [61499]
[2025-10-10 01:42:00] 2025-10-10 01:40:56,597 | INFO     | zombie collector waiting for pid 61499
[2025-10-10 01:42:00] 2025-10-10 01:40:56,597 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 01:42:00] 2025-10-10 01:40:56,597 | INFO     | collected zombie processes
[2025-10-10 01:42:00] 2025-10-10 01:40:56,597 | INFO     | will attempt to kill all subprocesses of pid=61499
[2025-10-10 01:42:00] 2025-10-10 01:40:56,682 | INFO     | process IDs to be killed: [61499] (in reverse order)
[2025-10-10 01:42:00] 2025-10-10 01:40:56,719 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 01:42:00] 2025-10-10 01:40:56,719 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 01:42:00] 2025-10-10 01:40:56,721 | INFO     | did not find any defunct processes belonging to 61499
[2025-10-10 01:42:00] 2025-10-10 01:40:56,724 | INFO     | did not find any defunct processes belonging to 61499
[2025-10-10 01:42:00] 2025-10-10 01:40:56,724 | INFO     | ready for new job
[2025-10-10 01:42:00] 2025-10-10 01:40:56,724 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 01:42:00] 2025-10-10 01:40:56,725 | INFO     | ***************************************
[2025-10-10 01:42:00] 2025-10-10 01:40:56,725 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 01:42:00] 2025-10-10 01:40:56,725 | INFO     | ***************************************
[2025-10-10 01:42:00] 2025-10-10 01:40:56,725 | INFO     | 
[2025-10-10 01:42:00] 2025-10-10 01:40:56,726 | INFO     | architecture information:
[2025-10-10 01:42:00] 2025-10-10 01:40:56,726 | INFO     | executing command: cat /etc/os-release
[2025-10-10 01:42:00] 2025-10-10 01:40:56,737 | INFO     | cat /etc/os-release:
[2025-10-10 01:42:00] NAME="CentOS Linux"
[2025-10-10 01:42:00] VERSION="7 (Core)"
[2025-10-10 01:42:00] ID="centos"
[2025-10-10 01:42:00] ID_LIKE="rhel fedora"
[2025-10-10 01:42:00] VERSION_ID="7"
[2025-10-10 01:42:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 01:42:00] ANSI_COLOR="0;31"
[2025-10-10 01:42:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 01:42:00] HOME_URL="https://www.centos.org/"
[2025-10-10 01:42:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 01:42:00] 
[2025-10-10 01:42:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 01:42:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 01:42:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 01:42:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 01:42:00] 
[2025-10-10 01:42:00] 2025-10-10 01:40:56,737 | INFO     | ***************************************
[2025-10-10 01:42:00] 2025-10-10 01:40:57,240 | INFO     | executing command: df -mP /home/ian/BOINC/slots/4
[2025-10-10 01:42:00] 2025-10-10 01:40:57,254 | INFO     | sufficient remaining disk space (10302259200 B)
[2025-10-10 01:42:00] 2025-10-10 01:40:57,254 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 01:42:00] 2025-10-10 01:40:57,254 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 01:42:00] 2025-10-10 01:40:57,254 | INFO     | update_server=False
[2025-10-10 01:42:00] 2025-10-10 01:40:57,254 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 01:42:00] 2025-10-10 01:40:57,254 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 01:42:00] 2025-10-10 01:40:57,254 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 01:42:00] 2025-10-10 01:40:57,290 | INFO     | all data control threads have been joined
[2025-10-10 01:42:00] 2025-10-10 01:40:57,308 | INFO     | all job control threads have been joined
[2025-10-10 01:42:00] 2025-10-10 01:40:57,372 | INFO     | all payload control threads have been joined
[2025-10-10 01:42:00] 2025-10-10 01:40:57,399 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 01:42:00] 2025-10-10 01:40:57,399 | INFO     | aborting loop
[2025-10-10 01:42:00] 2025-10-10 01:40:58,259 | INFO     | [job] retrieve thread has finished
[2025-10-10 01:42:00] 2025-10-10 01:40:58,259 | INFO     | [job] queue monitor thread has finished
[2025-10-10 01:42:00] 2025-10-10 01:40:58,295 | INFO     | [data] control thread has finished
[2025-10-10 01:42:00] 2025-10-10 01:40:58,313 | INFO     | [job] control thread has finished
[2025-10-10 01:42:00] 2025-10-10 01:40:58,343 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 01:42:00] 2025-10-10 01:40:58,377 | INFO     | [payload] control thread has finished
[2025-10-10 01:42:00] 2025-10-10 01:40:58,404 | INFO     | [job] job monitor thread has finished
[2025-10-10 01:42:00] 2025-10-10 01:40:58,446 | INFO     | [job] validate thread has finished
[2025-10-10 01:42:00] 2025-10-10 01:40:58,526 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 01:42:00] 2025-10-10 01:40:58,655 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 01:42:00] 2025-10-10 01:40:59,064 | INFO     | [payload] validate_post thread has finished
[2025-10-10 01:42:00] 2025-10-10 01:40:59,117 | INFO     | [payload] failed_post thread has finished
[2025-10-10 01:42:00] 2025-10-10 01:40:59,147 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 01:42:00] 2025-10-10 01:40:59,260 | INFO     | [data] copytool_out thread has finished
[2025-10-10 01:42:00] 2025-10-10 01:40:59,630 | INFO     | [data] copytool_in thread has finished
[2025-10-10 01:42:00] 2025-10-10 01:41:03,153 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 01:42:00] 2025-10-10 01:41:08,169 | INFO     | job.realtimelogging is not enabled
[2025-10-10 01:42:00] 2025-10-10 01:41:09,174 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 01:42:00] 2025-10-10 01:41:28,267 | INFO     | PID=40265 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-10 01:42:00] 2025-10-10 01:41:28,267 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 01:42:00] 2025-10-10 01:41:28,267 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 01:42:00] 2025-10-10 01:41:28,267 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 01:42:00] 2025-10-10 01:41:54,109 | INFO     | [monitor] cgroup control has ended
[2025-10-10 01:42:00] 2025-10-10 01:41:55,350 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134376890201920)>', '<ExcThread(monitor, started 134376532715264)>']
[2025-10-10 01:42:00] 2025-10-10 01:41:55,402 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 01:42:00] 2025-10-10 01:41:55,402 | INFO     | [monitor] control thread has ended
[2025-10-10 01:42:00] 2025-10-10 01:42:00,376 | INFO     | all workflow threads have been joined
[2025-10-10 01:42:00] 2025-10-10 01:42:00,376 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 01:42:00] 2025-10-10 01:42:00,376 | INFO     | traces error code: 0
[2025-10-10 01:42:00] 2025-10-10 01:42:00,376 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 01:42:00] 2025-10-10 01:42:00,426 [wrapper] ==== pilot stdout END ====
[2025-10-10 01:42:00] 2025-10-10 01:42:00,428 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 01:42:00] 2025-10-10 01:42:00,430 [wrapper] pilotpid: 40265
[2025-10-10 01:42:00] 2025-10-10 01:42:00,432 [wrapper] Pilot exit status: 0
[2025-10-10 01:42:00] 2025-10-10 01:42:00,438 [wrapper] pandaids: 6837345961
[2025-10-10 01:42:00] 2025-10-10 01:42:00,464 [wrapper] cleanup supervisor_pilot 1418749 40266
[2025-10-10 01:42:00] 2025-10-10 01:42:00,466 [wrapper] Test setup, not cleaning
[2025-10-10 01:42:00] 2025-10-10 01:42:00,468 [wrapper] apfmon messages muted
[2025-10-10 01:42:00] 2025-10-10 01:42:00,470 [wrapper] ==== wrapper stdout END ====
[2025-10-10 01:42:00] 2025-10-10 01:42:00,471 [wrapper] ==== wrapper stderr END ====
[2025-10-10 01:42:00]  *** Error codes and diagnostics ***
[2025-10-10 01:42:00]     "exeErrorCode": 0,
[2025-10-10 01:42:00]     "exeErrorDiag": "",
[2025-10-10 01:42:00]     "pilotErrorCode": 0,
[2025-10-10 01:42:00]     "pilotErrorDiag": "",
[2025-10-10 01:42:00]  *** Listing of results directory ***
[2025-10-10 01:42:00] total 414140
[2025-10-10 01:42:00] -rw-r--r-- 1 ian ian    557409 Oct  9 14:08 pilot3.tar.gz
[2025-10-10 01:42:00] -rwx------ 1 ian ian     36292 Oct  9 14:19 runpilot2-wrapper.sh
[2025-10-10 01:42:00] -rw-r--r-- 1 ian ian      5112 Oct  9 14:19 queuedata.json
[2025-10-10 01:42:00] -rw-rw-r-- 1 ian ian       100 Oct 10 00:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 01:42:00] -rwxr-xr-x 1 ian ian      7986 Oct 10 00:22 run_atlas
[2025-10-10 01:42:00] -rw-rw-r-- 1 ian ian       105 Oct 10 00:22 job.xml
[2025-10-10 01:42:00] -rw-r--r-- 2 ian ian 222060336 Oct 10 00:22 EVNT.46676267._000831.pool.root.1
[2025-10-10 01:42:00] drwxrwx--x 2 ian ian      4096 Oct 10 00:22 shared
[2025-10-10 01:42:00] -rw-r--r-- 2 ian ian    569678 Oct 10 00:22 input.tar.gz
[2025-10-10 01:42:00] -rw-r--r-- 2 ian ian     15120 Oct 10 00:22 start_atlas.sh
[2025-10-10 01:42:00] -rw-rw-r-- 1 ian ian         0 Oct 10 00:22 boinc_setup_complete
[2025-10-10 01:42:00] -rw-rw-r-- 1 ian ian      9256 Oct 10 00:22 init_data.xml
[2025-10-10 01:42:00] -rw-rw-r-- 1 ian ian         0 Oct 10 00:22 boinc_lockfile
[2025-10-10 01:42:00] -rw-rw-r-- 1 ian ian      2549 Oct 10 00:22 pandaJob.out
[2025-10-10 01:42:00] -rw------- 1 ian ian    975454 Oct 10 00:22 agis_schedconf.cvmfs.json
[2025-10-10 01:42:00] -rw------- 1 ian ian   1560580 Oct 10 00:22 agis_ddmendpoints.agis.ALL.json
[2025-10-10 01:42:00] drwx------ 5 ian ian      4096 Oct 10 00:22 pilot3
[2025-10-10 01:42:00] -rw------- 1 ian ian 196163495 Oct 10 01:40 HITS.46676269._019997.pool.root.1
[2025-10-10 01:42:00] -rw------- 1 ian ian        95 Oct 10 01:40 pilot_heartbeat.json
[2025-10-10 01:42:00] -rw-rw-r-- 1 ian ian       529 Oct 10 01:40 boinc_task_state.xml
[2025-10-10 01:42:00] -rw------- 1 ian ian      1029 Oct 10 01:40 memory_monitor_summary.json
[2025-10-10 01:42:00] -rw------- 1 ian ian    273315 Oct 10 01:40 log.46676269._019997.job.log.tgz.1
[2025-10-10 01:42:00] -rw------- 1 ian ian      7727 Oct 10 01:40 heartbeat.json
[2025-10-10 01:42:00] -rw-rw-r-- 1 ian ian      8192 Oct 10 01:41 boinc_mmap_file
[2025-10-10 01:42:00] -rw-rw-r-- 1 ian ian        27 Oct 10 01:41 wrapper_checkpoint.txt
[2025-10-10 01:42:00] -rw------- 1 ian ian      4819 Oct 10 01:42 pilotlog.txt
[2025-10-10 01:42:00] -rw------- 1 ian ian    699320 Oct 10 01:42 log.46676269._019997.job.log.1
[2025-10-10 01:42:00] -rw------- 1 ian ian       357 Oct 10 01:42 output.list
[2025-10-10 01:42:00] -rw-rw-r-- 1 ian ian       620 Oct 10 01:42 runtime_log
[2025-10-10 01:42:00] -rw------- 1 ian ian    993280 Oct 10 01:42 result.tar.gz
[2025-10-10 01:42:00] -rw-rw-r-- 1 ian ian      8721 Oct 10 01:42 runtime_log.err
[2025-10-10 01:42:00] -rw------- 1 ian ian       652 Oct 10 01:42 EEMLDmof6Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDml4NMDmSh7vMm.diag
[2025-10-10 01:42:00] -rw-rw-r-- 1 ian ian     21474 Oct 10 01:42 stderr.txt
[2025-10-10 01:42:00] HITS file was successfully produced:
[2025-10-10 01:42:00] -rw------- 1 ian ian 196163495 Oct 10 01:40 shared/HITS.pool.root.1
[2025-10-10 01:42:00]  *** Contents of shared directory: ***
[2025-10-10 01:42:00] total 409980
[2025-10-10 01:42:00] -rw-r--r-- 2 ian ian 222060336 Oct 10 00:22 ATLAS.root_0
[2025-10-10 01:42:00] -rw-r--r-- 2 ian ian    569678 Oct 10 00:22 input.tar.gz
[2025-10-10 01:42:00] -rw-r--r-- 2 ian ian     15120 Oct 10 00:22 start_atlas.sh
[2025-10-10 01:42:00] -rw------- 1 ian ian 196163495 Oct 10 01:40 HITS.pool.root.1
[2025-10-10 01:42:00] -rw------- 1 ian ian    993280 Oct 10 01:42 result.tar.gz
01:42:01 (34448): run_atlas exited; CPU time 18152.987799
01:42:01 (34448): called boinc_finish(0)

</stderr_txt>
]]>

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