Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:20:35 (1982629): wrapper (7.7.26015): starting
17:20:35 (1982629): wrapper: running run_atlas (--nthreads 12)
[2025-10-09 17:20:35] Arguments: --nthreads 12
[2025-10-09 17:20:35] Threads: 12
[2025-10-09 17:20:35] Checking for CVMFS
[2025-10-09 17:20:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 17:20:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 17:20:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 17:20:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 17:20:36] 2.11.5.0 2471 27517 208204 151528 3 18 26963571 45568001 11662 130560 0 256267809 99.849 119815034 24876 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-09 17:20:36] CVMFS is ok
[2025-10-09 17:20:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 17:20:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 17:20:36] Further information can be found at the LHC@home message board.
[2025-10-09 17:20:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 17:20:36] Checking for apptainer binary...
[2025-10-09 17:20:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-09 17:20:36] Running /usr/bin/apptainer --version
[2025-10-09 17:20:36] apptainer version 1.4.1-1.el9
[2025-10-09 17:20:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 17:20:37] wns0035.triumf.lcg
[2025-10-09 17:20:37] apptainer works
[2025-10-09 17:20:37] Set ATHENA_PROC_NUMBER=12
[2025-10-09 17:20:37] Set ATHENA_CORE_NUMBER=12
[2025-10-09 17:20:37] Starting ATLAS job with PandaID=6837364292
[2025-10-09 17:20:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 17:26:19]  *** The last 200 lines of the pilot log: ***
[2025-10-09 17:26:19] 2025-10-10 00:25:36,586 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | WARNING  | wrong length of table data, x=[1760055752.0], y=[30667.0] (must be same and length>=4)
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | INFO     | could have reported an average CPU frequency of 2556 MHz (4 samples)
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | INFO     | ..............................
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | INFO     | . Timing measurements:
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | INFO     | . get job = 0 s
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | INFO     | . initial setup = 3 s
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | INFO     | . payload setup = 22 s
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | INFO     | . stage-in = 0 s
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | INFO     | . payload execution = 64 s
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | INFO     | . stage-out = 0 s
[2025-10-09 17:26:19] 2025-10-10 00:25:36,588 | INFO     | . log creation = 0 s
[2025-10-09 17:26:19] 2025-10-10 00:25:36,588 | INFO     | ..............................
[2025-10-09 17:26:19] 2025-10-10 00:25:36,588 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 17:26:19] 2025-10-10 00:25:36,588 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837364292/pilotlog.txt
[2025-10-09 17:26:19] 2025-10-10 00:25:36,610 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-09 17:26:19] - Log from pilotlog.txt -
[2025-10-09 17:26:19] 2025-10-10 00:25:36,583 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837364292/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 17:26:19] 2025-10-10 00:25:36,584 | INFO     | extracted standard info from prmon json
[2025-10-09 17:26:19] 2025-10-10 00:25:36,584 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 17:26:19] 2025-10-10 00:25:36,584 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 17:26:19] 2025-10-10 00:25:36,584 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 17:26:19] 2025-10-10 00:25:36,586 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | WARNING  | wrong length of table data, x=[1760055752.0], y=[30667.0] (must be same and length>=4)
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | INFO     | could have reported an average CPU frequency of 2556 MHz (4 samples)
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | INFO     | ..............................
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | INFO     | . Timing measurements:
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | INFO     | . get job = 0 s
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | INFO     | . initial setup = 3 s
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | INFO     | . payload setup = 22 s
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | INFO     | . stage-in = 0 s
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | INFO     | . payload execution = 64 s
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | INFO     | . stage-out = 0 s
[2025-10-09 17:26:19] 2025-10-10 00:25:36,588 | INFO     | . log creation = 0 s
[2025-10-09 17:26:19] 2025-10-10 00:25:36,588 | INFO     | ..............................
[2025-10-09 17:26:19] 2025-10-10 00:25:36,588 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 17:26:19] 2025-10-10 00:25:36,588 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837364292/pilotlog.txt
[2025-10-09 17:26:19] 2025-10-10 00:25:36,610 | WARNING  | 
[2025-10-09 17:26:19] [begin log extracts]
[2025-10-09 17:26:19] - Log from pilotlog.txt -
[2025-10-09 17:26:19] 2025-10-10 00:25:36,583 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837364292/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 17:26:19] 2025-10-10 00:25:36,584 | INFO     | extracted standard info from prmon json
[2025-10-09 17:26:19] 2025-10-10 00:25:36,584 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 17:26:19] 2025-10-10 00:25:36,584 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 17:26:19] 2025-10-10 00:25:36,584 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 17:26:19] 2025-10-10 00:25:36,586 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | WARNING  | wrong length of table data, x=[1760055752.0], y=[30667.0] (must be same and length>=4)
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | INFO     | could have reported an average CPU frequency of 2556 MHz (4 samples)
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | INFO     | ..............................
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | INFO     | . Timing measurements:
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | INFO     | . get job = 0 s
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | INFO     | . initial setup = 3 s
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | INFO     | . payload setup = 22 s
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | INFO     | . stage-in = 0 s
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | INFO     | . payload execution = 64 s
[2025-10-09 17:26:19] 2025-10-10 00:25:36,587 | INFO     | . stage-out = 0 s
[2025-10-09 17:26:19] 2025-10-10 00:25:36,588 | INFO     | . log creation = 0 s
[2025-10-09 17:26:19] 2025-10-10 00:25:36,588 | INFO     | ..............................
[2025-10-09 17:26:19] 2025-10-10 00:25:36,588 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-09 17:26:19] 2025-10-10 00:25:36,588 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837364292/pilotlog.txt
[2025-10-09 17:26:19] [end log extracts]
[2025-10-09 17:26:19] 2025-10-10 00:25:36,610 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-09 17:26:19] 2025-10-10 00:25:36,611 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-09 17:26:19] 2025-10-10 00:25:36,710 | INFO     | 
[2025-10-09 17:26:19] 2025-10-10 00:25:36,711 | INFO     | job summary report
[2025-10-09 17:26:19] 2025-10-10 00:25:36,711 | INFO     | --------------------------------------------------
[2025-10-09 17:26:19] 2025-10-10 00:25:36,711 | INFO     | PanDA job id: 6837364292
[2025-10-09 17:26:19] 2025-10-10 00:25:36,711 | INFO     | task id: 46676269
[2025-10-09 17:26:19] 2025-10-10 00:25:36,711 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-09 17:23:13,073 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-09 17:26:19] 2025-10-10 00:25:36,711 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 17:26:19] 2025-10-10 00:25:36,711 | INFO     | pilot state: failed 
[2025-10-09 17:26:19] 2025-10-10 00:25:36,711 | INFO     | transexitcode: 65
[2025-10-09 17:26:19] 2025-10-10 00:25:36,711 | INFO     | exeerrorcode: 65
[2025-10-09 17:26:19] 2025-10-10 00:25:36,711 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 17:26:19] 2025-10-10 00:25:36,711 | INFO     | exitcode: 65
[2025-10-09 17:26:19] 2025-10-10 00:25:36,711 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-09 17:26:19] 2025-10-10 00:25:36,711 | INFO     | cpuconsumptiontime: 19 s
[2025-10-09 17:26:19] 2025-10-10 00:25:36,711 | INFO     | nevents: 0
[2025-10-09 17:26:19] 2025-10-10 00:25:36,712 | INFO     | neventsw: 0
[2025-10-09 17:26:19] 2025-10-10 00:25:36,712 | INFO     | pid: 1992997
[2025-10-09 17:26:19] 2025-10-10 00:25:36,712 | INFO     | pgrp: 1992997
[2025-10-09 17:26:19] 2025-10-10 00:25:36,712 | INFO     | corecount: 12
[2025-10-09 17:26:19] 2025-10-10 00:25:36,712 | INFO     | event service: False
[2025-10-09 17:26:19] 2025-10-10 00:25:36,712 | INFO     | sizes: {0: 2348854, 11: 2348854, 14: 2349144, 22: 2349172, 89: 2372378, 90: 2376670, 94: 2376826, 225: 2376992}
[2025-10-09 17:26:19] 2025-10-10 00:25:36,712 | INFO     | --------------------------------------------------
[2025-10-09 17:26:19] 2025-10-10 00:25:36,712 | INFO     | 
[2025-10-09 17:26:19] 2025-10-10 00:25:36,712 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-09 17:26:19] 2025-10-10 00:25:36,743 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 17:26:19] 2025-10-10 00:25:36,743 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 17:26:19] 2025-10-10 00:25:36,743 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 17:26:19] 2025-10-10 00:25:36,743 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 17:26:19] 2025-10-10 00:25:36,743 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 17:26:19] 2025-10-10 00:25:36,743 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 17:26:19] 2025-10-10 00:25:36,743 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 17:26:19] 2025-10-10 00:25:36,743 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 17:26:19] 2025-10-10 00:25:36,743 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 17:26:19] 2025-10-10 00:25:36,743 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 17:26:19] 2025-10-10 00:25:36,743 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 17:26:19] 2025-10-10 00:25:36,743 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 17:26:19] 2025-10-10 00:25:36,743 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 17:26:19] 2025-10-10 00:25:36,744 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 17:26:19] 2025-10-10 00:25:36,744 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 17:26:19] 2025-10-10 00:25:36,744 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 17:26:19] 2025-10-10 00:25:36,744 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 17:26:19] 2025-10-10 00:25:36,744 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 17:26:19] 2025-10-10 00:25:36,744 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 17:26:19] 2025-10-10 00:25:36,744 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 17:26:19] 2025-10-10 00:25:36,744 | INFO     | job 6837364292 has completed (purged errors)
[2025-10-09 17:26:19] 2025-10-10 00:25:36,744 | INFO     | overall cleanup function is called
[2025-10-09 17:26:19] 2025-10-10 00:25:37,749 | INFO     | --- collectZombieJob: --- 10, [1992997]
[2025-10-09 17:26:19] 2025-10-10 00:25:37,750 | INFO     | zombie collector waiting for pid 1992997
[2025-10-09 17:26:19] 2025-10-10 00:25:37,750 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 17:26:19] 2025-10-10 00:25:37,750 | INFO     | collected zombie processes
[2025-10-09 17:26:19] 2025-10-10 00:25:37,750 | INFO     | will attempt to kill all subprocesses of pid=1992997
[2025-10-09 17:26:19] 2025-10-10 00:25:37,962 | INFO     | process IDs to be killed: [1992997] (in reverse order)
[2025-10-09 17:26:19] 2025-10-10 00:25:38,025 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 17:26:19] 2025-10-10 00:25:38,025 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 17:26:19] 2025-10-10 00:25:38,034 | INFO     | did not find any defunct processes belonging to 1992997
[2025-10-09 17:26:19] 2025-10-10 00:25:38,043 | INFO     | did not find any defunct processes belonging to 1992997
[2025-10-09 17:26:19] 2025-10-10 00:25:38,043 | INFO     | ready for new job
[2025-10-09 17:26:19] 2025-10-10 00:25:38,043 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 17:26:19] 2025-10-10 00:25:38,044 | INFO     | ***************************************
[2025-10-09 17:26:19] 2025-10-10 00:25:38,045 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 17:26:19] 2025-10-10 00:25:38,045 | INFO     | ***************************************
[2025-10-09 17:26:19] 2025-10-10 00:25:38,045 | INFO     | 
[2025-10-09 17:26:19] 2025-10-10 00:25:38,046 | INFO     | architecture information:
[2025-10-09 17:26:19] 2025-10-10 00:25:38,047 | INFO     | executing command: cat /etc/os-release
[2025-10-09 17:26:19] 2025-10-10 00:25:38,058 | INFO     | cat /etc/os-release:
[2025-10-09 17:26:19] NAME="CentOS Linux"
[2025-10-09 17:26:19] VERSION="7 (Core)"
[2025-10-09 17:26:19] ID="centos"
[2025-10-09 17:26:19] ID_LIKE="rhel fedora"
[2025-10-09 17:26:19] VERSION_ID="7"
[2025-10-09 17:26:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 17:26:19] ANSI_COLOR="0;31"
[2025-10-09 17:26:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 17:26:19] HOME_URL="https://www.centos.org/"
[2025-10-09 17:26:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 17:26:19] 
[2025-10-09 17:26:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 17:26:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 17:26:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 17:26:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 17:26:19] 
[2025-10-09 17:26:19] 2025-10-10 00:25:38,059 | INFO     | ***************************************
[2025-10-09 17:26:19] 2025-10-10 00:25:38,562 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-09 17:26:19] 2025-10-10 00:25:38,602 | INFO     | sufficient remaining disk space (2018086223872 B)
[2025-10-09 17:26:19] 2025-10-10 00:25:38,602 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 17:26:19] 2025-10-10 00:25:38,602 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 17:26:19] 2025-10-10 00:25:38,602 | INFO     | update_server=False
[2025-10-09 17:26:19] 2025-10-10 00:25:38,602 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 17:26:19] 2025-10-10 00:25:38,603 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 17:26:19] 2025-10-10 00:25:38,609 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 17:26:19] 2025-10-10 00:25:38,616 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 17:26:19] 2025-10-10 00:25:38,663 | INFO     | all job control threads have been joined
[2025-10-09 17:26:19] 2025-10-10 00:25:39,052 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-09 17:26:19] 2025-10-10 00:25:39,052 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-09 17:26:19] 2025-10-10 00:25:39,053 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 17:26:19] 2025-10-10 00:25:39,053 | INFO     | will abort loop
[2025-10-09 17:26:19] 2025-10-10 00:25:39,108 | INFO     | all data control threads have been joined
[2025-10-09 17:26:19] 2025-10-10 00:25:39,486 | INFO     | all payload control threads have been joined
[2025-10-09 17:26:19] 2025-10-10 00:25:39,608 | INFO     | [job] retrieve thread has finished
[2025-10-09 17:26:19] 2025-10-10 00:25:39,621 | INFO     | [job] queue monitor thread has finished
[2025-10-09 17:26:19] 2025-10-10 00:25:39,669 | INFO     | [job] control thread has finished
[2025-10-09 17:26:19] 2025-10-10 00:25:39,828 | INFO     | [payload] validate_post thread has finished
[2025-10-09 17:26:19] 2025-10-10 00:25:40,058 | INFO     | [job] job monitor thread has finished
[2025-10-09 17:26:19] 2025-10-10 00:25:40,114 | INFO     | [data] control thread has finished
[2025-10-09 17:26:19] 2025-10-10 00:25:40,386 | INFO     | [job] validate thread has finished
[2025-10-09 17:26:19] 2025-10-10 00:25:40,492 | INFO     | [payload] control thread has finished
[2025-10-09 17:26:19] 2025-10-10 00:25:40,551 | INFO     | [payload] failed_post thread has finished
[2025-10-09 17:26:19] 2025-10-10 00:25:40,610 | INFO     | [data] copytool_out thread has finished
[2025-10-09 17:26:19] 2025-10-10 00:25:40,626 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 17:26:19] 2025-10-10 00:25:40,657 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 17:26:19] 2025-10-10 00:25:40,707 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 17:26:19] 2025-10-10 00:25:40,939 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 17:26:19] 2025-10-10 00:25:41,006 | INFO     | [data] copytool_in thread has finished
[2025-10-09 17:26:19] 2025-10-10 00:25:42,622 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 17:26:19] 2025-10-10 00:26:08,475 | INFO     | PID=1986347 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 17:26:19] 2025-10-10 00:26:08,475 | INFO     | .. there are 21 such processes running
[2025-10-09 17:26:19] 2025-10-10 00:26:08,475 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 17:26:19] 2025-10-10 00:26:08,476 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 17:26:19] 2025-10-10 00:26:08,476 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 17:26:19] 2025-10-10 00:26:12,473 | INFO     | [monitor] cgroup control has ended
[2025-10-09 17:26:19] 2025-10-10 00:26:14,157 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139804517029696)>', '<ExcThread(monitor, started 139804104701696)>']
[2025-10-09 17:26:19] 2025-10-10 00:26:14,509 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 17:26:19] 2025-10-10 00:26:14,509 | INFO     | [monitor] control thread has ended
[2025-10-09 17:26:19] 2025-10-10 00:26:19,181 | INFO     | all workflow threads have been joined
[2025-10-09 17:26:19] 2025-10-10 00:26:19,182 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 17:26:19] 2025-10-10 00:26:19,182 | INFO     | traces error code: 0
[2025-10-09 17:26:19] 2025-10-10 00:26:19,182 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 17:26:19] 2025-10-10 00:26:19,311 [wrapper] ==== pilot stdout END ====
[2025-10-09 17:26:19] 2025-10-10 00:26:19,319 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 17:26:19] 2025-10-10 00:26:19,330 [wrapper] pilotpid: 1986347
[2025-10-09 17:26:19] 2025-10-10 00:26:19,334 [wrapper] Pilot exit status: 0
[2025-10-09 17:26:19] 2025-10-10 00:26:19,361 [wrapper] pandaids: 6837364292
[2025-10-09 17:26:19] 2025-10-10 00:26:19,436 [wrapper] cleanup supervisor_pilot 1986353 1986348
[2025-10-09 17:26:19] 2025-10-10 00:26:19,442 [wrapper] Test setup, not cleaning
[2025-10-09 17:26:19] 2025-10-10 00:26:19,451 [wrapper] apfmon messages muted
[2025-10-09 17:26:19] 2025-10-10 00:26:19,458 [wrapper] ==== wrapper stdout END ====
[2025-10-09 17:26:19] 2025-10-10 00:26:19,461 [wrapper] ==== wrapper stderr END ====
[2025-10-09 17:26:19]  *** Error codes and diagnostics ***
[2025-10-09 17:26:19]     "exeErrorCode": 65,
[2025-10-09 17:26:19]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 17:26:19]     "pilotErrorCode": 1305,
[2025-10-09 17:26:19]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-09 17:26:19]  *** Listing of results directory ***
[2025-10-09 17:26:19] total 220476
[2025-10-09 17:26:19] -rw-r--r--. 1 boinc boinc    557409 Oct  9 14:11 pilot3.tar.gz
[2025-10-09 17:26:19] -rw-r--r--. 1 boinc boinc      5112 Oct  9 14:40 queuedata.json
[2025-10-09 17:26:19] -rwx------. 1 boinc boinc     36292 Oct  9 14:41 runpilot2-wrapper.sh
[2025-10-09 17:26:19] -rw-r--r--. 1 boinc boinc       100 Oct  9 17:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 17:26:19] -rwxr-xr-x. 1 boinc boinc      7986 Oct  9 17:20 run_atlas
[2025-10-09 17:26:19] -rw-r--r--. 1 boinc boinc       105 Oct  9 17:20 job.xml
[2025-10-09 17:26:19] -rw-r--r--. 1 boinc boinc      6594 Oct  9 17:20 init_data.xml
[2025-10-09 17:26:19] -rw-r--r--. 2 boinc boinc 221633014 Oct  9 17:20 EVNT.46676267._001125.pool.root.1
[2025-10-09 17:26:19] -rw-r--r--. 2 boinc boinc     15120 Oct  9 17:20 start_atlas.sh
[2025-10-09 17:26:19] drwxrwx--x. 2 boinc boinc      4096 Oct  9 17:20 shared
[2025-10-09 17:26:19] -rw-r--r--. 2 boinc boinc    569680 Oct  9 17:20 input.tar.gz
[2025-10-09 17:26:19] -rw-r--r--. 1 boinc boinc         0 Oct  9 17:20 boinc_lockfile
[2025-10-09 17:26:19] -rw-r--r--. 1 boinc boinc      2550 Oct  9 17:20 pandaJob.out
[2025-10-09 17:26:19] -rw-------. 1 boinc boinc    975454 Oct  9 17:21 agis_schedconf.cvmfs.json
[2025-10-09 17:26:19] -rw-------. 1 boinc boinc   1560580 Oct  9 17:21 agis_ddmendpoints.agis.ALL.json
[2025-10-09 17:26:19] drwx------. 5 boinc boinc      4096 Oct  9 17:21 pilot3
[2025-10-09 17:26:19] -rw-r--r--. 1 boinc boinc       523 Oct  9 17:23 boinc_task_state.xml
[2025-10-09 17:26:19] -rw-------. 1 boinc boinc       963 Oct  9 17:23 memory_monitor_summary.json
[2025-10-09 17:26:19] -rw-------. 1 boinc boinc     21939 Oct  9 17:23 log.46676269._026752.job.log.tgz.1
[2025-10-09 17:26:19] -rw-------. 1 boinc boinc        95 Oct  9 17:25 pilot_heartbeat.json
[2025-10-09 17:26:19] -rw-------. 1 boinc boinc      8404 Oct  9 17:25 heartbeat.json
[2025-10-09 17:26:19] -rw-r--r--. 1 boinc boinc      8192 Oct  9 17:26 boinc_mmap_file
[2025-10-09 17:26:19] -rw-r--r--. 1 boinc boinc        22 Oct  9 17:26 wrapper_checkpoint.txt
[2025-10-09 17:26:19] -rw-------. 1 boinc boinc      5009 Oct  9 17:26 pilotlog.txt
[2025-10-09 17:26:19] -rw-------. 1 boinc boinc     93556 Oct  9 17:26 log.46676269._026752.job.log.1
[2025-10-09 17:26:19] -rw-------. 1 boinc boinc       188 Oct  9 17:26 output.list
[2025-10-09 17:26:19] -rw-r--r--. 1 boinc boinc       620 Oct  9 17:26 runtime_log
[2025-10-09 17:26:19] -rw-------. 1 boinc boinc    133120 Oct  9 17:26 result.tar.gz
[2025-10-09 17:26:19] -rw-r--r--. 1 boinc boinc      8528 Oct  9 17:26 runtime_log.err
[2025-10-09 17:26:19] -rw-------. 1 boinc boinc       647 Oct  9 17:26 0lnLDmzYDR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkQbNDmE8Vu0m.diag
[2025-10-09 17:26:19] -rw-r--r--. 1 boinc boinc     21823 Oct  9 17:26 stderr.txt
[2025-10-09 17:26:19] No HITS result produced
[2025-10-09 17:26:19]  *** Contents of shared directory: ***
[2025-10-09 17:26:19] total 217152
[2025-10-09 17:26:19] -rw-r--r--. 2 boinc boinc 221633014 Oct  9 17:20 ATLAS.root_0
[2025-10-09 17:26:19] -rw-r--r--. 2 boinc boinc     15120 Oct  9 17:20 start_atlas.sh
[2025-10-09 17:26:19] -rw-r--r--. 2 boinc boinc    569680 Oct  9 17:20 input.tar.gz
[2025-10-09 17:26:19] -rw-------. 1 boinc boinc    133120 Oct  9 17:26 result.tar.gz
17:26:21 (1982629): run_atlas exited; CPU time 27.183203
17:26:21 (1982629): called boinc_finish(0)

</stderr_txt>
]]>

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