Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:35:04 (94020): wrapper (7.7.26015): starting
10:35:04 (94020): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 10:35:04] Arguments: --nthreads 4
[2025-10-12 10:35:04] Threads: 4
[2025-10-12 10:35:04] Checking for CVMFS
[2025-10-12 10:35:04] No cvmfs_config command found, will try listing directly
[2025-10-12 10:35:04] CVMFS is ok
[2025-10-12 10:35:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:35:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:35:04] Further information can be found at the LHC@home message board.
[2025-10-12 10:35:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:35:04] Checking for apptainer binary...
[2025-10-12 10:35:04] which: no apptainer in ((null))
[2025-10-12 10:35:04] apptainer is not installed, using version from CVMFS
[2025-10-12 10:35:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:35:04] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2025-10-12 10:35:04] apptainer works
[2025-10-12 10:35:04] Set ATHENA_PROC_NUMBER=4
[2025-10-12 10:35:04] Set ATHENA_CORE_NUMBER=4
[2025-10-12 10:35:04] Starting ATLAS job with PandaID=6837358359
[2025-10-12 10:35:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:32:40]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:32:40] 2025-10-12 11:32:01,557 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:32:40] 2025-10-12 11:32:01,557 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:32:40] 2025-10-12 11:32:01,560 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:32:40] 2025-10-12 11:32:01,561 | INFO     | sum of square deviations: 1633472487.5
[2025-10-12 13:32:40] 2025-10-12 11:32:01,562 | INFO     | sum of deviations: 7946311583.0
[2025-10-12 13:32:40] 2025-10-12 11:32:01,562 | INFO     | mean x: 1760263416.5
[2025-10-12 13:32:40] 2025-10-12 11:32:01,562 | INFO     | mean y: 2301191.0
[2025-10-12 13:32:40] 2025-10-12 11:32:01,562 | INFO     | -- intersect: -8560806962.154677
[2025-10-12 13:32:40] 2025-10-12 11:32:01,563 | INFO     | intersect: -8560806962.154677
[2025-10-12 13:32:40] 2025-10-12 11:32:01,563 | INFO     | chi2: 2.0275449746294285
[2025-10-12 13:32:40] 2025-10-12 11:32:01,563 | INFO     | sum of square deviations: 1496660620.0
[2025-10-12 13:32:40] 2025-10-12 11:32:01,564 | INFO     | sum of deviations: 16986157112.00001
[2025-10-12 13:32:40] 2025-10-12 11:32:01,564 | INFO     | mean x: 1760263264.0
[2025-10-12 13:32:40] 2025-10-12 11:32:01,564 | INFO     | mean y: 2311010.6153846155
[2025-10-12 13:32:40] 2025-10-12 11:32:01,564 | INFO     | -- intersect: -19975570388.299187
[2025-10-12 13:32:40] 2025-10-12 11:32:01,565 | INFO     | intersect: -19975570388.299187
[2025-10-12 13:32:40] 2025-10-12 11:32:01,565 | INFO     | chi2: 1.37530032888673
[2025-10-12 13:32:40] 2025-10-12 11:32:01,565 | INFO     | current chi2=1.37530032888673 (change=32.16918262747332 %)
[2025-10-12 13:32:40] 2025-10-12 11:32:01,565 | INFO     | sum of square deviations: 1367709365.0
[2025-10-12 13:32:40] 2025-10-12 11:32:01,566 | INFO     | sum of deviations: 16215812572.999998
[2025-10-12 13:32:40] 2025-10-12 11:32:01,566 | INFO     | mean x: 1760263111.5
[2025-10-12 13:32:40] 2025-10-12 11:32:01,566 | INFO     | mean y: 2310100.2317073173
[2025-10-12 13:32:40] 2025-10-12 11:32:01,566 | INFO     | -- intersect: -20867691543.172844
[2025-10-12 13:32:40] 2025-10-12 11:32:01,566 | INFO     | intersect: -20867691543.172844
[2025-10-12 13:32:40] 2025-10-12 11:32:01,567 | INFO     | chi2: 1.3764413895188874
[2025-10-12 13:32:40] 2025-10-12 11:32:01,567 | INFO     | current chi2=1.3764413895188874 (change=-0.08296810581591386 %)
[2025-10-12 13:32:40] 2025-10-12 11:32:01,567 | INFO     | right removable region: 163
[2025-10-12 13:32:40] 2025-10-12 11:32:01,567 | INFO     | sum of square deviations: 1496660620.0
[2025-10-12 13:32:40] 2025-10-12 11:32:01,568 | INFO     | sum of deviations: -15049171407.999996
[2025-10-12 13:32:40] 2025-10-12 11:32:01,568 | INFO     | mean x: 1760263569.0
[2025-10-12 13:32:40] 2025-10-12 11:32:01,568 | INFO     | mean y: 2326471.1242603553
[2025-10-12 13:32:40] 2025-10-12 11:32:01,568 | INFO     | -- intersect: 17702069364.833073
[2025-10-12 13:32:40] 2025-10-12 11:32:01,569 | INFO     | intersect: 17702069364.833073
[2025-10-12 13:32:40] 2025-10-12 11:32:01,569 | INFO     | chi2: 0.6851603363830951
[2025-10-12 13:32:40] 2025-10-12 11:32:01,569 | INFO     | current chi2=0.6851603363830951 (change=66.20739145338462 %)
[2025-10-12 13:32:40] 2025-10-12 11:32:01,569 | INFO     | sum of square deviations: 1367709365.0
[2025-10-12 13:32:40] 2025-10-12 11:32:01,570 | INFO     | sum of deviations: -14389029011.5
[2025-10-12 13:32:40] 2025-10-12 11:32:01,570 | INFO     | mean x: 1760263721.5
[2025-10-12 13:32:40] 2025-10-12 11:32:01,570 | INFO     | mean y: 2325681.1646341463
[2025-10-12 13:32:40] 2025-10-12 11:32:01,570 | INFO     | -- intersect: 18521235037.72553
[2025-10-12 13:32:40] 2025-10-12 11:32:01,571 | INFO     | intersect: 18521235037.72553
[2025-10-12 13:32:40] 2025-10-12 11:32:01,571 | INFO     | chi2: 0.6851423761154952
[2025-10-12 13:32:40] 2025-10-12 11:32:01,571 | INFO     | current chi2=0.6851423761154952 (change=0.0026213233087508422 %)
[2025-10-12 13:32:40] 2025-10-12 11:32:01,571 | INFO     | left removable region: 20
[2025-10-12 13:32:40] 2025-10-12 11:32:01,571 | INFO     | sum of square deviations: 906703512.0
[2025-10-12 13:32:40] 2025-10-12 11:32:01,572 | INFO     | sum of deviations: -3094132158.0000005
[2025-10-12 13:32:40] 2025-10-12 11:32:01,572 | INFO     | mean x: 1760263691.0
[2025-10-12 13:32:40] 2025-10-12 11:32:01,572 | INFO     | mean y: 2333465.4895104896
[2025-10-12 13:32:40] 2025-10-12 11:32:01,572 | INFO     | -- intersect: 6009245781.147196
[2025-10-12 13:32:40] 2025-10-12 11:32:01,572 | INFO     | intersect: 6009245781.147196
[2025-10-12 13:32:40] 2025-10-12 11:32:01,573 | INFO     | chi2: 0.010866423887876949
[2025-10-12 13:32:40] 2025-10-12 11:32:01,573 | INFO     | -- intersect: 6009245781.147196
[2025-10-12 13:32:40] 2025-10-12 11:32:01,573 | INFO     | current memory leak: -3.41 B/s (using 143 data points, chi2=0.01)
[2025-10-12 13:32:40] 2025-10-12 11:32:01,573 | INFO     | could have reported an average CPU frequency of 2706 MHz (9 samples)
[2025-10-12 13:32:40] 2025-10-12 11:32:01,573 | INFO     | ..............................
[2025-10-12 13:32:40] 2025-10-12 11:32:01,574 | INFO     | . Timing measurements:
[2025-10-12 13:32:40] 2025-10-12 11:32:01,574 | INFO     | . get job = 0 s
[2025-10-12 13:32:40] 2025-10-12 11:32:01,574 | INFO     | . initial setup = 1 s
[2025-10-12 13:32:40] 2025-10-12 11:32:01,574 | INFO     | . payload setup = 5 s
[2025-10-12 13:32:40] 2025-10-12 11:32:01,574 | INFO     | . stage-in = 0 s
[2025-10-12 13:32:40] 2025-10-12 11:32:01,574 | INFO     | . payload execution = 10572 s
[2025-10-12 13:32:40] 2025-10-12 11:32:01,574 | INFO     | . stage-out = 0 s
[2025-10-12 13:32:40] 2025-10-12 11:32:01,574 | INFO     | . log creation = 0 s
[2025-10-12 13:32:40] 2025-10-12 11:32:01,574 | INFO     | ..............................
[2025-10-12 13:32:40] 2025-10-12 11:32:01,665 | INFO     | 
[2025-10-12 13:32:40] 2025-10-12 11:32:01,665 | INFO     | job summary report
[2025-10-12 13:32:40] 2025-10-12 11:32:01,665 | INFO     | --------------------------------------------------
[2025-10-12 13:32:40] 2025-10-12 11:32:01,665 | INFO     | PanDA job id: 6837358359
[2025-10-12 13:32:40] 2025-10-12 11:32:01,665 | INFO     | task id: 46676269
[2025-10-12 13:32:40] 2025-10-12 11:32:01,665 | INFO     | errors: (none)
[2025-10-12 13:32:40] 2025-10-12 11:32:01,665 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:32:40] 2025-10-12 11:32:01,665 | INFO     | pilot state: finished 
[2025-10-12 13:32:40] 2025-10-12 11:32:01,665 | INFO     | transexitcode: 0
[2025-10-12 13:32:40] 2025-10-12 11:32:01,666 | INFO     | exeerrorcode: 0
[2025-10-12 13:32:40] 2025-10-12 11:32:01,666 | INFO     | exeerrordiag: 
[2025-10-12 13:32:40] 2025-10-12 11:32:01,666 | INFO     | exitcode: 0
[2025-10-12 13:32:40] 2025-10-12 11:32:01,666 | INFO     | exitmsg: OK
[2025-10-12 13:32:40] 2025-10-12 11:32:01,666 | INFO     | cpuconsumptiontime: 40984 s
[2025-10-12 13:32:40] 2025-10-12 11:32:01,666 | INFO     | nevents: 400
[2025-10-12 13:32:40] 2025-10-12 11:32:01,666 | INFO     | neventsw: 0
[2025-10-12 13:32:40] 2025-10-12 11:32:01,666 | INFO     | pid: 152541
[2025-10-12 13:32:40] 2025-10-12 11:32:01,666 | INFO     | pgrp: 152541
[2025-10-12 13:32:40] 2025-10-12 11:32:01,666 | INFO     | corecount: 4
[2025-10-12 13:32:40] 2025-10-12 11:32:01,666 | INFO     | event service: False
[2025-10-12 13:32:40] 2025-10-12 11:32:01,666 | INFO     | sizes: {0: 2348695, 1: 2348894, 5: 2349156, 11: 2349212, 10581: 2378100, 10583: 2387120, 10586: 2387304, 10592: 2387562}
[2025-10-12 13:32:40] 2025-10-12 11:32:01,666 | INFO     | --------------------------------------------------
[2025-10-12 13:32:40] 2025-10-12 11:32:01,667 | INFO     | 
[2025-10-12 13:32:40] 2025-10-12 11:32:01,667 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-10-12 13:32:40] 2025-10-12 11:32:01,686 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:32:40] 2025-10-12 11:32:01,686 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:32:40] 2025-10-12 11:32:01,686 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:32:40] 2025-10-12 11:32:01,686 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:32:40] 2025-10-12 11:32:01,687 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:32:40] 2025-10-12 11:32:01,687 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:32:40] 2025-10-12 11:32:01,687 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:32:40] 2025-10-12 11:32:01,687 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:32:40] 2025-10-12 11:32:01,687 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:32:40] 2025-10-12 11:32:01,687 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:32:40] 2025-10-12 11:32:01,687 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:32:40] 2025-10-12 11:32:01,687 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:32:40] 2025-10-12 11:32:01,687 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:32:40] 2025-10-12 11:32:01,687 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:32:40] 2025-10-12 11:32:01,687 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:32:40] 2025-10-12 11:32:01,687 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:32:40] 2025-10-12 11:32:01,687 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:32:40] 2025-10-12 11:32:01,687 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:32:40] 2025-10-12 11:32:01,688 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:32:40] 2025-10-12 11:32:01,688 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:32:40] 2025-10-12 11:32:01,688 | INFO     | job 6837358359 has completed (purged errors)
[2025-10-12 13:32:40] 2025-10-12 11:32:01,688 | INFO     | overall cleanup function is called
[2025-10-12 13:32:40] 2025-10-12 11:32:02,696 | INFO     | --- collectZombieJob: --- 10, [152541]
[2025-10-12 13:32:40] 2025-10-12 11:32:02,697 | INFO     | zombie collector waiting for pid 152541
[2025-10-12 13:32:40] 2025-10-12 11:32:02,697 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:32:40] 2025-10-12 11:32:02,697 | INFO     | collected zombie processes
[2025-10-12 13:32:40] 2025-10-12 11:32:02,697 | INFO     | will attempt to kill all subprocesses of pid=152541
[2025-10-12 13:32:40] 2025-10-12 11:32:03,051 | INFO     | process IDs to be killed: [152541] (in reverse order)
[2025-10-12 13:32:40] 2025-10-12 11:32:03,147 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:32:40] 2025-10-12 11:32:03,147 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:32:40] 2025-10-12 11:32:03,159 | INFO     | did not find any defunct processes belonging to 152541
[2025-10-12 13:32:40] 2025-10-12 11:32:03,169 | INFO     | did not find any defunct processes belonging to 152541
[2025-10-12 13:32:40] 2025-10-12 11:32:03,170 | INFO     | ready for new job
[2025-10-12 13:32:40] 2025-10-12 11:32:03,170 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:32:40] 2025-10-12 11:32:03,172 | INFO     | ***************************************
[2025-10-12 13:32:40] 2025-10-12 11:32:03,172 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:32:40] 2025-10-12 11:32:03,172 | INFO     | ***************************************
[2025-10-12 13:32:40] 2025-10-12 11:32:03,172 | INFO     | 
[2025-10-12 13:32:40] 2025-10-12 11:32:03,176 | INFO     | architecture information:
[2025-10-12 13:32:40] 2025-10-12 11:32:03,176 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:32:40] 2025-10-12 11:32:03,189 | INFO     | cat /etc/os-release:
[2025-10-12 13:32:40] NAME="CentOS Linux"
[2025-10-12 13:32:40] VERSION="7 (Core)"
[2025-10-12 13:32:40] ID="centos"
[2025-10-12 13:32:40] ID_LIKE="rhel fedora"
[2025-10-12 13:32:40] VERSION_ID="7"
[2025-10-12 13:32:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:32:40] ANSI_COLOR="0;31"
[2025-10-12 13:32:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:32:40] HOME_URL="https://www.centos.org/"
[2025-10-12 13:32:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:32:40] 
[2025-10-12 13:32:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:32:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:32:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:32:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:32:40] 
[2025-10-12 13:32:40] 2025-10-12 11:32:03,189 | INFO     | ***************************************
[2025-10-12 13:32:40] 2025-10-12 11:32:03,692 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-10-12 13:32:40] 2025-10-12 11:32:03,707 | INFO     | sufficient remaining disk space (693989539840 B)
[2025-10-12 13:32:40] 2025-10-12 11:32:03,707 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:32:40] 2025-10-12 11:32:03,707 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:32:40] 2025-10-12 11:32:03,707 | INFO     | update_server=False
[2025-10-12 13:32:40] 2025-10-12 11:32:03,707 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:32:40] 2025-10-12 11:32:03,708 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:32:40] 2025-10-12 11:32:03,708 | INFO     | aborting loop
[2025-10-12 13:32:40] 2025-10-12 11:32:03,840 | INFO     | all payload control threads have been joined
[2025-10-12 13:32:40] 2025-10-12 11:32:03,880 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:32:40] 2025-10-12 11:32:03,931 | INFO     | all data control threads have been joined
[2025-10-12 13:32:40] 2025-10-12 11:32:04,713 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:32:40] 2025-10-12 11:32:04,713 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:32:40] 2025-10-12 11:32:04,753 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:32:40] 2025-10-12 11:32:04,846 | INFO     | [payload] control thread has finished
[2025-10-12 13:32:40] 2025-10-12 11:32:04,937 | INFO     | [data] control thread has finished
[2025-10-12 13:32:40] 2025-10-12 11:32:04,965 | INFO     | [job] validate thread has finished
[2025-10-12 13:32:40] 2025-10-12 11:32:05,053 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:32:40] 2025-10-12 11:32:05,075 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:32:40] 2025-10-12 11:32:05,307 | INFO     | all job control threads have been joined
[2025-10-12 13:32:40] 2025-10-12 11:32:05,364 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:32:40] 2025-10-12 11:32:05,695 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:32:40] 2025-10-12 11:32:05,704 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:32:40] 2025-10-12 11:32:05,886 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:32:40] 2025-10-12 11:32:06,280 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:32:40] 2025-10-12 11:32:06,307 | INFO     | [job] control thread has finished
[2025-10-12 13:32:40] 2025-10-12 11:32:06,671 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:32:40] 2025-10-12 11:32:07,677 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:32:40] 2025-10-12 11:32:10,286 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:32:40] 2025-10-12 11:32:13,826 | INFO     | job.realtimelogging is not enabled
[2025-10-12 13:32:40] 2025-10-12 11:32:14,830 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:32:40] 2025-10-12 11:32:30,850 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:32:40] 2025-10-12 11:32:31,409 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22954103666496)>', '<ExcThread(monitor, started 22953859176192)>']
[2025-10-12 13:32:40] 2025-10-12 11:32:33,311 | INFO     | PID=110665 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 13:32:40] 2025-10-12 11:32:33,311 | INFO     | .. there are 2 such processes running
[2025-10-12 13:32:40] 2025-10-12 11:32:33,312 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:32:40] 2025-10-12 11:32:33,312 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:32:40] 2025-10-12 11:32:33,312 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:32:40] 2025-10-12 11:32:33,312 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:32:40] 2025-10-12 11:32:33,312 | INFO     | [monitor] control thread has ended
[2025-10-12 13:32:40] 2025-10-12 11:32:36,434 | INFO     | all workflow threads have been joined
[2025-10-12 13:32:40] 2025-10-12 11:32:36,435 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:32:40] 2025-10-12 11:32:36,435 | INFO     | traces error code: 0
[2025-10-12 13:32:40] 2025-10-12 11:32:36,435 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:32:40] 2025-10-12 11:32:36,561 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:32:40] 2025-10-12 11:32:36,563 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:32:40] 2025-10-12 11:32:36,565 [wrapper] pilotpid: 110665
[2025-10-12 13:32:40] 2025-10-12 11:32:36,568 [wrapper] Pilot exit status: 0
[2025-10-12 13:32:40] 2025-10-12 11:32:36,577 [wrapper] pandaids: 6837358359
[2025-10-12 13:32:40] 2025-10-12 11:32:36,642 [wrapper] cleanup supervisor_pilot  327862 110667
[2025-10-12 13:32:40] 2025-10-12 11:32:36,645 [wrapper] Test setup, not cleaning
[2025-10-12 13:32:40] 2025-10-12 11:32:36,647 [wrapper] apfmon messages muted
[2025-10-12 13:32:40] 2025-10-12 11:32:36,650 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:32:40] 2025-10-12 11:32:36,652 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:32:40]  *** Error codes and diagnostics ***
[2025-10-12 13:32:40]     "exeErrorCode": 0,
[2025-10-12 13:32:40]     "exeErrorDiag": "",
[2025-10-12 13:32:40]     "pilotErrorCode": 0,
[2025-10-12 13:32:40]     "pilotErrorDiag": "",
[2025-10-12 13:32:40]  *** Listing of results directory ***
[2025-10-12 13:32:40] total 417296
[2025-10-12 13:32:40] -rw-r--r-- 1 boinc boinc    557409 Oct  9 20:29 pilot3.tar.gz
[2025-10-12 13:32:40] -rwx------ 1 boinc boinc     36292 Oct  9 20:34 runpilot2-wrapper.sh
[2025-10-12 13:32:40] -rw-r--r-- 1 boinc boinc      5112 Oct  9 20:34 queuedata.json
[2025-10-12 13:32:40] -rw-r--r-- 1 boinc boinc       100 Oct 12 10:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:32:40] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 10:34 run_atlas
[2025-10-12 13:32:40] -rw-r--r-- 1 boinc boinc       105 Oct 12 10:34 job.xml
[2025-10-12 13:32:40] -rw-r--r-- 2 boinc boinc 223548455 Oct 12 10:35 EVNT.46676267._000997.pool.root.1
[2025-10-12 13:32:40] -rw-r--r-- 1 boinc boinc      6635 Oct 12 10:35 init_data.xml
[2025-10-12 13:32:40] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:35 start_atlas.sh
[2025-10-12 13:32:40] drwxrwx--x 2 boinc boinc      4096 Oct 12 10:35 shared
[2025-10-12 13:32:40] -rw-r--r-- 2 boinc boinc    569675 Oct 12 10:35 input.tar.gz
[2025-10-12 13:32:40] -rw-r--r-- 1 boinc boinc         0 Oct 12 10:35 boinc_lockfile
[2025-10-12 13:32:40] -rw-r--r-- 1 boinc boinc      2549 Oct 12 10:35 pandaJob.out
[2025-10-12 13:32:40] -rw------- 1 boinc boinc    975520 Oct 12 10:35 agis_schedconf.cvmfs.json
[2025-10-12 13:32:40] -rw------- 1 boinc boinc   1560580 Oct 12 10:35 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:32:40] drwx------ 5 boinc boinc      4096 Oct 12 10:35 pilot3
[2025-10-12 13:32:40] -rw------- 1 boinc boinc 196123049 Oct 12 13:31 HITS.46676269._024321.pool.root.1
[2025-10-12 13:32:40] -rw-r--r-- 1 boinc boinc       528 Oct 12 13:31 boinc_task_state.xml
[2025-10-12 13:32:40] -rw------- 1 boinc boinc      1035 Oct 12 13:31 memory_monitor_summary.json
[2025-10-12 13:32:40] -rw------- 1 boinc boinc    358953 Oct 12 13:31 log.46676269._024321.job.log.tgz.1
[2025-10-12 13:32:40] -rw------- 1 boinc boinc      7830 Oct 12 13:32 heartbeat.json
[2025-10-12 13:32:40] -rw------- 1 boinc boinc        95 Oct 12 13:32 pilot_heartbeat.json
[2025-10-12 13:32:40] -rw------- 1 boinc boinc      4904 Oct 12 13:32 pilotlog.txt
[2025-10-12 13:32:40] -rw------- 1 boinc boinc   1509696 Oct 12 13:32 log.46676269._024321.job.log.1
[2025-10-12 13:32:40] -rw------- 1 boinc boinc       357 Oct 12 13:32 output.list
[2025-10-12 13:32:40] -rw-r--r-- 1 boinc boinc       620 Oct 12 13:32 runtime_log
[2025-10-12 13:32:40] -rw------- 1 boinc boinc   1884160 Oct 12 13:32 result.tar.gz
[2025-10-12 13:32:40] -rw-r--r-- 1 boinc boinc      9070 Oct 12 13:32 runtime_log.err
[2025-10-12 13:32:40] -rw------- 1 boinc boinc       664 Oct 12 13:32 PUsLDmoeAR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmW2aNDmeQqbLm.diag
[2025-10-12 13:32:40] -rw-r--r-- 1 boinc boinc      8192 Oct 12 13:32 boinc_mmap_file
[2025-10-12 13:32:40] -rw-r--r-- 1 boinc boinc        26 Oct 12 13:32 wrapper_checkpoint.txt
[2025-10-12 13:32:40] -rw-r--r-- 1 boinc boinc     20657 Oct 12 13:32 stderr.txt
[2025-10-12 13:32:40] HITS file was successfully produced:
[2025-10-12 13:32:40] -rw------- 1 boinc boinc 196123049 Oct 12 13:31 shared/HITS.pool.root.1
[2025-10-12 13:32:40]  *** Contents of shared directory: ***
[2025-10-12 13:32:40] total 412264
[2025-10-12 13:32:40] -rw-r--r-- 2 boinc boinc 223548455 Oct 12 10:35 ATLAS.root_0
[2025-10-12 13:32:40] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:35 start_atlas.sh
[2025-10-12 13:32:40] -rw-r--r-- 2 boinc boinc    569675 Oct 12 10:35 input.tar.gz
[2025-10-12 13:32:40] -rw------- 1 boinc boinc 196123049 Oct 12 13:31 HITS.pool.root.1
[2025-10-12 13:32:40] -rw------- 1 boinc boinc   1884160 Oct 12 13:32 result.tar.gz
13:32:42 (94020): run_atlas exited; CPU time 41388.100480
13:32:42 (94020): called boinc_finish(0)

</stderr_txt>
]]>

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