Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:45 (1365105): wrapper (7.7.26015): starting
00:03:45 (1365105): wrapper: running run_atlas (--nthreads 9)
[2025-10-10 00:03:45] Arguments: --nthreads 9
[2025-10-10 00:03:45] Threads: 9
[2025-10-10 00:03:45] Checking for CVMFS
[2025-10-10 00:03:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 00:03:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 00:03:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 00:03:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 00:03:49] 2.13.2.0 4249 71052 406800 151533 2 207 36180855 39288832 16488 16776704 0 119597425 99.527 150895580 29661 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 00:03:49] CVMFS is ok
[2025-10-10 00:03:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 00:03:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 00:03:49] Further information can be found at the LHC@home message board.
[2025-10-10 00:03:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 00:03:49] Checking for apptainer binary...
[2025-10-10 00:03:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 00:03:49] Running /usr/bin/apptainer --version
[2025-10-10 00:03:50] apptainer version 1.4.3-1.el9
[2025-10-10 00:03:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 00:03:51] c-211-29.aglt2.org
[2025-10-10 00:03:51] apptainer works
[2025-10-10 00:03:51] Set ATHENA_PROC_NUMBER=9
[2025-10-10 00:03:51] Set ATHENA_CORE_NUMBER=9
[2025-10-10 00:03:51] Starting ATLAS job with PandaID=6837358622
[2025-10-10 00:03:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 12:28:49]  *** The last 200 lines of the pilot log: ***
[2025-10-10 12:28:49] 2025-10-10 16:27:42,337 | INFO     | time since job start (44487s) is within the limit (172800.0s)
[2025-10-10 12:28:49] 2025-10-10 16:27:42,890 | INFO     | monitor loop #2316: job 0:6837358622 is in state 'finished'
[2025-10-10 12:28:49] 2025-10-10 16:27:42,890 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 12:28:49] 2025-10-10 16:27:43,701 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-10 12:28:49] 2025-10-10 16:27:43,710 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2900.0004999999996
[2025-10-10 12:28:49] 2025-10-10 16:27:43,718 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6837358622/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 12:28:49] 2025-10-10 16:27:43,719 | INFO     | extracted standard info from prmon json
[2025-10-10 12:28:49] 2025-10-10 16:27:43,719 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 12:28:49] 2025-10-10 16:27:43,719 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 12:28:49] 2025-10-10 16:27:43,719 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 12:28:49] 2025-10-10 16:27:43,720 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 12:28:49] 2025-10-10 16:27:43,738 | INFO     | fitting pss+swap vs Time
[2025-10-10 12:28:49] 2025-10-10 16:27:43,740 | INFO     | sum of square deviations: 118646751658.27553
[2025-10-10 12:28:49] 2025-10-10 16:27:43,754 | INFO     | sum of deviations: 329157511629.631
[2025-10-10 12:28:49] 2025-10-10 16:27:43,755 | INFO     | mean x: 1760091506.0716252
[2025-10-10 12:28:49] 2025-10-10 16:27:43,755 | INFO     | mean y: 2540818.5840220386
[2025-10-10 12:28:49] 2025-10-10 16:27:43,755 | INFO     | -- intersect: -4880419163.730645
[2025-10-10 12:28:49] 2025-10-10 16:27:43,755 | INFO     | intersect: -4880419163.730645
[2025-10-10 12:28:49] 2025-10-10 16:27:43,756 | INFO     | chi2: 3.3444658412931814
[2025-10-10 12:28:49] 2025-10-10 16:27:43,758 | INFO     | sum of square deviations: 116212162814.13055
[2025-10-10 12:28:49] 2025-10-10 16:27:43,772 | INFO     | sum of deviations: 373189930292.6323
[2025-10-10 12:28:49] 2025-10-10 16:27:43,772 | INFO     | mean x: 1760091353.5755894
[2025-10-10 12:28:49] 2025-10-10 16:27:43,772 | INFO     | mean y: 2543560.2177531207
[2025-10-10 12:28:49] 2025-10-10 16:27:43,772 | INFO     | -- intersect: -5649604662.856804
[2025-10-10 12:28:49] 2025-10-10 16:27:43,772 | INFO     | intersect: -5649604662.856804
[2025-10-10 12:28:49] 2025-10-10 16:27:43,774 | INFO     | chi2: 2.648531627089703
[2025-10-10 12:28:49] 2025-10-10 16:27:43,774 | INFO     | current chi2=2.648531627089703 (change=20.80853108472432 %)
[2025-10-10 12:28:49] 2025-10-10 16:27:43,774 | INFO     | right removable region: 720
[2025-10-10 12:28:49] 2025-10-10 16:27:43,775 | INFO     | sum of square deviations: 116211953706.28052
[2025-10-10 12:28:49] 2025-10-10 16:27:43,790 | INFO     | sum of deviations: 148317586655.30365
[2025-10-10 12:28:49] 2025-10-10 16:27:43,790 | INFO     | mean x: 1760091658.5742025
[2025-10-10 12:28:49] 2025-10-10 16:27:43,790 | INFO     | mean y: 2552127.919556172
[2025-10-10 12:28:49] 2025-10-10 16:27:43,791 | INFO     | -- intersect: -2243796365.2109585
[2025-10-10 12:28:49] 2025-10-10 16:27:43,791 | INFO     | intersect: -2243796365.2109585
[2025-10-10 12:28:49] 2025-10-10 16:27:43,792 | INFO     | chi2: 0.9419122098063419
[2025-10-10 12:28:49] 2025-10-10 16:27:43,792 | INFO     | current chi2=0.9419122098063419 (change=71.8366921803531 %)
[2025-10-10 12:28:49] 2025-10-10 16:27:43,793 | INFO     | sum of square deviations: 113810779351.07703
[2025-10-10 12:28:49] 2025-10-10 16:27:43,807 | INFO     | sum of deviations: 91915969059.10901
[2025-10-10 12:28:49] 2025-10-10 16:27:43,807 | INFO     | mean x: 1760091811.0740223
[2025-10-10 12:28:49] 2025-10-10 16:27:43,808 | INFO     | mean y: 2555705.941340782
[2025-10-10 12:28:49] 2025-10-10 16:27:43,808 | INFO     | -- intersect: -1418931304.0792086
[2025-10-10 12:28:49] 2025-10-10 16:27:43,808 | INFO     | intersect: -1418931304.0792086
[2025-10-10 12:28:49] 2025-10-10 16:27:43,809 | INFO     | chi2: 0.7374232684232896
[2025-10-10 12:28:49] 2025-10-10 16:27:43,809 | INFO     | current chi2=0.7374232684232896 (change=21.709978833918655 %)
[2025-10-10 12:28:49] 2025-10-10 16:27:43,809 | INFO     | left removable region: 20
[2025-10-10 12:28:49] 2025-10-10 16:27:43,811 | INFO     | sum of square deviations: 106350674463.24986
[2025-10-10 12:28:49] 2025-10-10 16:27:43,825 | INFO     | sum of deviations: 118124535617.35008
[2025-10-10 12:28:49] 2025-10-10 16:27:43,825 | INFO     | mean x: 1760091933.05
[2025-10-10 12:28:49] 2025-10-10 16:27:43,825 | INFO     | mean y: 2559775.247142857
[2025-10-10 12:28:49] 2025-10-10 16:27:43,825 | INFO     | -- intersect: -1952388261.3750405
[2025-10-10 12:28:49] 2025-10-10 16:27:43,825 | INFO     | intersect: -1952388261.3750405
[2025-10-10 12:28:49] 2025-10-10 16:27:43,826 | INFO     | chi2: 0.01376520311327671
[2025-10-10 12:28:49] 2025-10-10 16:27:43,827 | INFO     | -- intersect: -1952388261.3750405
[2025-10-10 12:28:49] 2025-10-10 16:27:43,827 | INFO     | current memory leak: 1.11 B/s (using 700 data points, chi2=0.01)
[2025-10-10 12:28:49] 2025-10-10 16:27:43,828 | INFO     | could have reported an average CPU frequency of 2899 MHz (28 samples)
[2025-10-10 12:28:49] 2025-10-10 16:27:43,828 | INFO     | ..............................
[2025-10-10 12:28:49] 2025-10-10 16:27:43,828 | INFO     | . Timing measurements:
[2025-10-10 12:28:49] 2025-10-10 16:27:43,828 | INFO     | . get job = 2 s
[2025-10-10 12:28:49] 2025-10-10 16:27:43,828 | INFO     | . initial setup = 15 s
[2025-10-10 12:28:49] 2025-10-10 16:27:43,829 | INFO     | . payload setup = 64 s
[2025-10-10 12:28:49] 2025-10-10 16:27:43,829 | INFO     | . stage-in = 0 s
[2025-10-10 12:28:49] 2025-10-10 16:27:43,829 | INFO     | . payload execution = 44293 s
[2025-10-10 12:28:49] 2025-10-10 16:27:43,829 | INFO     | . stage-out = 3 s
[2025-10-10 12:28:49] 2025-10-10 16:27:43,829 | INFO     | . log creation = 0 s
[2025-10-10 12:28:49] 2025-10-10 16:27:43,829 | INFO     | ..............................
[2025-10-10 12:28:49] 2025-10-10 16:27:44,006 | INFO     | 
[2025-10-10 12:28:49] 2025-10-10 16:27:44,006 | INFO     | job summary report
[2025-10-10 12:28:49] 2025-10-10 16:27:44,006 | INFO     | --------------------------------------------------
[2025-10-10 12:28:49] 2025-10-10 16:27:44,006 | INFO     | PanDA job id: 6837358622
[2025-10-10 12:28:49] 2025-10-10 16:27:44,007 | INFO     | task id: 46676269
[2025-10-10 12:28:49] 2025-10-10 16:27:44,007 | INFO     | errors: (none)
[2025-10-10 12:28:49] 2025-10-10 16:27:44,007 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 12:28:49] 2025-10-10 16:27:44,007 | INFO     | pilot state: finished 
[2025-10-10 12:28:49] 2025-10-10 16:27:44,007 | INFO     | transexitcode: 0
[2025-10-10 12:28:49] 2025-10-10 16:27:44,007 | INFO     | exeerrorcode: 0
[2025-10-10 12:28:49] 2025-10-10 16:27:44,008 | INFO     | exeerrordiag: 
[2025-10-10 12:28:49] 2025-10-10 16:27:44,008 | INFO     | exitcode: 0
[2025-10-10 12:28:49] 2025-10-10 16:27:44,008 | INFO     | exitmsg: OK
[2025-10-10 12:28:49] 2025-10-10 16:27:44,008 | INFO     | cpuconsumptiontime: 75124 s
[2025-10-10 12:28:49] 2025-10-10 16:27:44,008 | INFO     | nevents: 400
[2025-10-10 12:28:49] 2025-10-10 16:27:44,008 | INFO     | neventsw: 0
[2025-10-10 12:28:49] 2025-10-10 16:27:44,008 | INFO     | pid: 1432309
[2025-10-10 12:28:49] 2025-10-10 16:27:44,009 | INFO     | pgrp: 1432309
[2025-10-10 12:28:49] 2025-10-10 16:27:44,009 | INFO     | corecount: 9
[2025-10-10 12:28:49] 2025-10-10 16:27:44,009 | INFO     | event service: False
[2025-10-10 12:28:49] 2025-10-10 16:27:44,009 | INFO     | sizes: {0: 2348027, 2: 2348628, 3: 2348712, 6: 2348740, 7: 2348939, 8: 2348967, 11: 2349123, 24: 2349151, 35: 2349179, 46: 2349207, 55: 2349497, 59: 2349805, 44362
[2025-10-10 12:28:49] 2025-10-10 16:27:44,009 | INFO     | --------------------------------------------------
[2025-10-10 12:28:49] 2025-10-10 16:27:44,009 | INFO     | 
[2025-10-10 12:28:49] 2025-10-10 16:27:44,010 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-10 12:28:49] 2025-10-10 16:27:44,033 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 12:28:49] 2025-10-10 16:27:44,033 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 12:28:49] 2025-10-10 16:27:44,033 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 12:28:49] 2025-10-10 16:27:44,034 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 12:28:49] 2025-10-10 16:27:44,034 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 12:28:49] 2025-10-10 16:27:44,034 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 12:28:49] 2025-10-10 16:27:44,034 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 12:28:49] 2025-10-10 16:27:44,034 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 12:28:49] 2025-10-10 16:27:44,034 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 12:28:49] 2025-10-10 16:27:44,034 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 12:28:49] 2025-10-10 16:27:44,035 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 12:28:49] 2025-10-10 16:27:44,035 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 12:28:49] 2025-10-10 16:27:44,035 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 12:28:49] 2025-10-10 16:27:44,035 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 12:28:49] 2025-10-10 16:27:44,035 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 12:28:49] 2025-10-10 16:27:44,035 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 12:28:49] 2025-10-10 16:27:44,036 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 12:28:49] 2025-10-10 16:27:44,036 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 12:28:49] 2025-10-10 16:27:44,036 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 12:28:49] 2025-10-10 16:27:44,036 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 12:28:49] 2025-10-10 16:27:44,036 | INFO     | job 6837358622 has completed (purged errors)
[2025-10-10 12:28:49] 2025-10-10 16:27:44,036 | INFO     | overall cleanup function is called
[2025-10-10 12:28:49] 2025-10-10 16:27:45,046 | INFO     | --- collectZombieJob: --- 10, [1432309]
[2025-10-10 12:28:49] 2025-10-10 16:27:45,046 | INFO     | zombie collector waiting for pid 1432309
[2025-10-10 12:28:49] 2025-10-10 16:27:45,047 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 12:28:49] 2025-10-10 16:27:45,047 | INFO     | collected zombie processes
[2025-10-10 12:28:49] 2025-10-10 16:27:45,047 | INFO     | will attempt to kill all subprocesses of pid=1432309
[2025-10-10 12:28:49] 2025-10-10 16:27:45,573 | INFO     | process IDs to be killed: [1432309] (in reverse order)
[2025-10-10 12:28:49] 2025-10-10 16:27:45,789 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 12:28:49] 2025-10-10 16:27:45,790 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 12:28:49] 2025-10-10 16:27:45,810 | INFO     | did not find any defunct processes belonging to 1432309
[2025-10-10 12:28:49] 2025-10-10 16:27:45,884 | INFO     | did not find any defunct processes belonging to 1432309
[2025-10-10 12:28:49] 2025-10-10 16:27:45,884 | INFO     | ready for new job
[2025-10-10 12:28:49] 2025-10-10 16:27:45,884 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 12:28:49] 2025-10-10 16:27:45,889 | INFO     | ***************************************
[2025-10-10 12:28:49] 2025-10-10 16:27:45,889 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 12:28:49] 2025-10-10 16:27:45,889 | INFO     | ***************************************
[2025-10-10 12:28:49] 2025-10-10 16:27:45,889 | INFO     | 
[2025-10-10 12:28:49] 2025-10-10 16:27:45,891 | INFO     | architecture information:
[2025-10-10 12:28:49] 2025-10-10 16:27:45,892 | INFO     | executing command: cat /etc/os-release
[2025-10-10 12:28:49] 2025-10-10 16:27:45,968 | INFO     | cat /etc/os-release:
[2025-10-10 12:28:49] NAME="CentOS Linux"
[2025-10-10 12:28:49] VERSION="7 (Core)"
[2025-10-10 12:28:49] ID="centos"
[2025-10-10 12:28:49] ID_LIKE="rhel fedora"
[2025-10-10 12:28:49] VERSION_ID="7"
[2025-10-10 12:28:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 12:28:49] ANSI_COLOR="0;31"
[2025-10-10 12:28:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 12:28:49] HOME_URL="https://www.centos.org/"
[2025-10-10 12:28:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 12:28:49] 
[2025-10-10 12:28:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 12:28:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 12:28:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 12:28:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 12:28:49] 
[2025-10-10 12:28:49] 2025-10-10 16:27:45,968 | INFO     | ***************************************
[2025-10-10 12:28:49] 2025-10-10 16:27:46,472 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-10 12:28:49] 2025-10-10 16:27:46,503 | INFO     | sufficient remaining disk space (52961476608 B)
[2025-10-10 12:28:49] 2025-10-10 16:27:46,503 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 12:28:49] 2025-10-10 16:27:46,503 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 12:28:49] 2025-10-10 16:27:46,504 | INFO     | update_server=False
[2025-10-10 12:28:49] 2025-10-10 16:27:46,504 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 12:28:49] 2025-10-10 16:27:46,505 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 12:28:49] 2025-10-10 16:27:46,505 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 12:28:49] 2025-10-10 16:27:46,505 | INFO     | aborting loop
[2025-10-10 12:28:49] 2025-10-10 16:27:46,728 | INFO     | all payload control threads have been joined
[2025-10-10 12:28:49] 2025-10-10 16:27:47,062 | INFO     | all data control threads have been joined
[2025-10-10 12:28:49] 2025-10-10 16:27:47,137 | INFO     | all job control threads have been joined
[2025-10-10 12:28:49] 2025-10-10 16:27:47,511 | INFO     | [job] retrieve thread has finished
[2025-10-10 12:28:49] 2025-10-10 16:27:47,511 | INFO     | [job] job monitor thread has finished
[2025-10-10 12:28:49] 2025-10-10 16:27:47,734 | INFO     | [payload] control thread has finished
[2025-10-10 12:28:49] 2025-10-10 16:27:47,986 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 12:28:49] 2025-10-10 16:27:48,072 | INFO     | [data] control thread has finished
[2025-10-10 12:28:49] 2025-10-10 16:27:48,155 | INFO     | [job] control thread has finished
[2025-10-10 12:28:49] 2025-10-10 16:27:48,513 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 12:28:49] 2025-10-10 16:27:48,513 | INFO     | [job] validate thread has finished
[2025-10-10 12:28:49] 2025-10-10 16:27:48,514 | INFO     | [data] copytool_out thread has finished
[2025-10-10 12:28:49] 2025-10-10 16:27:48,592 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 12:28:49] 2025-10-10 16:27:48,606 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 12:28:49] 2025-10-10 16:27:48,683 | INFO     | [payload] validate_post thread has finished
[2025-10-10 12:28:49] 2025-10-10 16:27:48,703 | INFO     | [payload] failed_post thread has finished
[2025-10-10 12:28:49] 2025-10-10 16:27:48,984 | INFO     | [data] copytool_in thread has finished
[2025-10-10 12:28:49] 2025-10-10 16:27:48,985 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 12:28:49] 2025-10-10 16:27:49,023 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 12:28:49] 2025-10-10 16:27:50,029 | INFO     | [job] queue monitor thread has finished
[2025-10-10 12:28:49] 2025-10-10 16:27:52,000 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 12:28:49] 2025-10-10 16:28:16,378 | INFO     | PID=1387071 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 12:28:49] 2025-10-10 16:28:16,379 | INFO     | .. there are 29 such processes running
[2025-10-10 12:28:49] 2025-10-10 16:28:16,380 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 12:28:49] 2025-10-10 16:28:16,380 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 12:28:49] 2025-10-10 16:28:16,380 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 12:28:49] 2025-10-10 16:28:41,870 | INFO     | [monitor] cgroup control has ended
[2025-10-10 12:28:49] 2025-10-10 16:28:43,392 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140038443054912)>', '<ExcThread(monitor, started 140037811336960)>']
[2025-10-10 12:28:49] 2025-10-10 16:28:43,549 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 12:28:49] 2025-10-10 16:28:43,550 | INFO     | [monitor] control thread has ended
[2025-10-10 12:28:49] 2025-10-10 16:28:48,418 | INFO     | all workflow threads have been joined
[2025-10-10 12:28:49] 2025-10-10 16:28:48,419 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 12:28:49] 2025-10-10 16:28:48,419 | INFO     | traces error code: 0
[2025-10-10 12:28:49] 2025-10-10 16:28:48,419 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 12:28:49] 2025-10-10 16:28:48,648 [wrapper] ==== pilot stdout END ====
[2025-10-10 12:28:49] 2025-10-10 16:28:48,652 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 12:28:49] 2025-10-10 16:28:48,655 [wrapper] pilotpid: 1387071
[2025-10-10 12:28:49] 2025-10-10 16:28:48,659 [wrapper] Pilot exit status: 0
[2025-10-10 12:28:49] 2025-10-10 16:28:48,741 [wrapper] pandaids: 6837358622
[2025-10-10 12:28:49] 2025-10-10 16:28:48,826 [wrapper] cleanup supervisor_pilot 1698354 1387072
[2025-10-10 12:28:49] 2025-10-10 16:28:48,831 [wrapper] Test setup, not cleaning
[2025-10-10 12:28:49] 2025-10-10 16:28:48,834 [wrapper] apfmon messages muted
[2025-10-10 12:28:49] 2025-10-10 16:28:48,849 [wrapper] ==== wrapper stdout END ====
[2025-10-10 12:28:49] 2025-10-10 16:28:48,859 [wrapper] ==== wrapper stderr END ====
[2025-10-10 12:28:49]  *** Error codes and diagnostics ***
[2025-10-10 12:28:49]     "exeErrorCode": 0,
[2025-10-10 12:28:49]     "exeErrorDiag": "",
[2025-10-10 12:28:49]     "pilotErrorCode": 0,
[2025-10-10 12:28:49]     "pilotErrorDiag": "",
[2025-10-10 12:28:49]  *** Listing of results directory ***
[2025-10-10 12:28:49] total 419124
[2025-10-10 12:28:49] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 14:29 pilot3.tar.gz
[2025-10-10 12:28:49] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 14:41 queuedata.json
[2025-10-10 12:28:49] -rwx------. 1 boincer umatlas     36292 Oct  9 14:42 runpilot2-wrapper.sh
[2025-10-10 12:28:49] -rw-r--r--. 1 boincer umatlas       100 Oct 10 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 12:28:49] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 00:03 run_atlas
[2025-10-10 12:28:49] -rw-r--r--. 1 boincer umatlas       105 Oct 10 00:03 job.xml
[2025-10-10 12:28:49] -rw-r--r--. 2 boincer umatlas 221848774 Oct 10 00:03 EVNT.46676267._001001.pool.root.1
[2025-10-10 12:28:49] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 00:03 start_atlas.sh
[2025-10-10 12:28:49] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 00:03 shared
[2025-10-10 12:28:49] -rw-r--r--. 2 boincer umatlas    569686 Oct 10 00:03 input.tar.gz
[2025-10-10 12:28:49] -rw-r--r--. 1 boincer umatlas         0 Oct 10 00:03 boinc_lockfile
[2025-10-10 12:28:49] -rw-r--r--. 1 boincer umatlas      2549 Oct 10 00:03 pandaJob.out
[2025-10-10 12:28:49] -rw-------. 1 boincer umatlas    975454 Oct 10 00:06 agis_schedconf.cvmfs.json
[2025-10-10 12:28:49] drwx------. 5 boincer umatlas      4096 Oct 10 00:06 pilot3
[2025-10-10 12:28:49] -rw-------. 1 boincer umatlas 191693931 Oct 10 12:26 HITS.46676269._024410.pool.root.1
[2025-10-10 12:28:49] -rw-r--r--. 1 boincer umatlas       531 Oct 10 12:26 boinc_task_state.xml
[2025-10-10 12:28:49] -rw-r--r--. 1 boincer umatlas      6524 Oct 10 12:27 init_data.xml
[2025-10-10 12:28:49] -rw-------. 1 boincer umatlas      1060 Oct 10 12:27 memory_monitor_summary.json
[2025-10-10 12:28:49] -rw-------. 1 boincer umatlas   1560580 Oct 10 12:27 agis_ddmendpoints.agis.ALL.json
[2025-10-10 12:28:49] -rw-------. 1 boincer umatlas    817471 Oct 10 12:27 log.46676269._024410.job.log.tgz.1
[2025-10-10 12:28:49] -rw-------. 1 boincer umatlas      7825 Oct 10 12:27 heartbeat.json
[2025-10-10 12:28:49] -rw-------. 1 boincer umatlas        95 Oct 10 12:28 pilot_heartbeat.json
[2025-10-10 12:28:49] -rw-r--r--. 1 boincer umatlas        28 Oct 10 12:28 wrapper_checkpoint.txt
[2025-10-10 12:28:49] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 12:28 boinc_mmap_file
[2025-10-10 12:28:49] -rw-------. 1 boincer umatlas      4824 Oct 10 12:28 pilotlog.txt
[2025-10-10 12:28:49] -rw-------. 1 boincer umatlas   5048009 Oct 10 12:28 log.46676269._024410.job.log.1
[2025-10-10 12:28:49] -rw-------. 1 boincer umatlas       357 Oct 10 12:28 output.list
[2025-10-10 12:28:49] -rw-r--r--. 1 boincer umatlas       620 Oct 10 12:28 runtime_log
[2025-10-10 12:28:49] -rw-------. 1 boincer umatlas   5888000 Oct 10 12:28 result.tar.gz
[2025-10-10 12:28:49] -rw-r--r--. 1 boincer umatlas      8704 Oct 10 12:28 runtime_log.err
[2025-10-10 12:28:49] -rw-------. 1 boincer umatlas       658 Oct 10 12:28 n45MDmolAR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmW3aNDmaG8oJm.diag
[2025-10-10 12:28:49] -rw-r--r--. 1 boincer umatlas     21256 Oct 10 12:28 stderr.txt
[2025-10-10 12:28:49] HITS file was successfully produced:
[2025-10-10 12:28:49] -rw-------. 1 boincer umatlas 191693931 Oct 10 12:26 shared/HITS.pool.root.1
[2025-10-10 12:28:49]  *** Contents of shared directory: ***
[2025-10-10 12:28:49] total 410188
[2025-10-10 12:28:49] -rw-r--r--. 2 boincer umatlas 221848774 Oct 10 00:03 ATLAS.root_0
[2025-10-10 12:28:49] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 00:03 start_atlas.sh
[2025-10-10 12:28:49] -rw-r--r--. 2 boincer umatlas    569686 Oct 10 00:03 input.tar.gz
[2025-10-10 12:28:49] -rw-------. 1 boincer umatlas 191693931 Oct 10 12:26 HITS.pool.root.1
[2025-10-10 12:28:49] -rw-------. 1 boincer umatlas   5888000 Oct 10 12:28 result.tar.gz
12:28:51 (1365105): run_atlas exited; CPU time 77389.281112
12:28:51 (1365105): called boinc_finish(0)

</stderr_txt>
]]>

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